Citrus Sinensis ID: 000230
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | 2.2.26 [Sep-21-2011] | |||||||
| F4J5S1 | 1407 | Clustered mitochondria pr | no | no | 0.155 | 0.201 | 0.480 | 6e-70 | |
| O15818 | 1320 | Clustered mitochondria pr | yes | no | 0.223 | 0.308 | 0.288 | 2e-51 | |
| B4MY63 | 1441 | Protein clueless OS=Droso | N/A | no | 0.158 | 0.200 | 0.305 | 5e-40 | |
| B4LQ23 | 1465 | Protein clueless OS=Droso | N/A | no | 0.208 | 0.259 | 0.284 | 1e-38 | |
| B4KT50 | 1487 | Protein clueless OS=Droso | N/A | no | 0.159 | 0.195 | 0.296 | 1e-37 | |
| Q7PZD5 | 1463 | Clustered mitochondria pr | yes | no | 0.169 | 0.211 | 0.305 | 2e-37 | |
| B4GAM1 | 1435 | Protein clueless OS=Droso | N/A | no | 0.158 | 0.201 | 0.302 | 2e-37 | |
| Q291J5 | 1435 | Protein clueless OS=Droso | yes | no | 0.158 | 0.201 | 0.302 | 2e-37 | |
| B0W2S0 | 1377 | Clustered mitochondria pr | N/A | no | 0.169 | 0.224 | 0.298 | 3e-37 | |
| B4JW99 | 1494 | Protein clueless OS=Droso | N/A | no | 0.152 | 0.186 | 0.3 | 4e-37 |
| >sp|F4J5S1|CLU_ARATH Clustered mitochondria protein OS=Arabidopsis thaliana GN=FMT PE=2 SV=1 | Back alignment and function desciption |
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Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 184/285 (64%)
Query: 814 RKFSILRGLSHKVGLELVPRDYDMDSESPFRKSDIISMVPVYKHVACSSADGRTLLESSK 873
+K S+LR L KVG+ + R YD + +PF SDI+ + PV KH ++ + L+E K
Sbjct: 974 KKVSVLRNLCQKVGVSIAARKYDFSANTPFETSDILDLRPVIKHSVPVCSEAKDLVEMGK 1033
Query: 874 TSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKA 933
L +G L ++ + S+A S L V GP HR A LA+VLYH GD A + Q K
Sbjct: 1034 VQLAEGMLSESYTFFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKE 1093
Query: 934 LDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAAT 993
L INER LGLDHPDT SYG++A+FY+ L TELAL+ + RAL LL L+ GP HP+ AAT
Sbjct: 1094 LIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALQNMGRALLLLGLSSGPDHPDVAAT 1153
Query: 994 YINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSV 1053
+INVAMM + +G + ALRYL EALK N+RLLG +HIQTA YHA+AIA + M A+ LS
Sbjct: 1154 FINVAMMYQDMGKMDTALRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNCMGAFKLSH 1213
Query: 1054 QHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNG 1098
QHE+ T IL +LG +D RT+D+ W++ F+ + L+ + G
Sbjct: 1214 QHEKKTYDILVKQLGDDDSRTRDSLNWMKTFKMRELQMTAQKQKG 1258
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Involved in proper cytoplasmic distribution of mitochondria. Arabidopsis thaliana (taxid: 3702) |
| >sp|O15818|CLU_DICDI Clustered mitochondria protein homolog OS=Dictyostelium discoideum GN=clua PE=1 SV=2 | Back alignment and function description |
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| >sp|B4MY63|CLU_DROWI Protein clueless OS=Drosophila willistoni GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|B4LQ23|CLU_DROVI Protein clueless OS=Drosophila virilis GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|B4KT50|CLU_DROMO Protein clueless OS=Drosophila mojavensis GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7PZD5|CLU_ANOGA Clustered mitochondria protein homolog OS=Anopheles gambiae GN=AGAP011851 PE=3 SV=4 | Back alignment and function description |
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| >sp|B4GAM1|CLU_DROPE Protein clueless OS=Drosophila persimilis GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|Q291J5|CLU_DROPS Protein clueless OS=Drosophila pseudoobscura pseudoobscura GN=clu PE=3 SV=2 | Back alignment and function description |
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| >sp|B0W2S0|CLU_CULQU Clustered mitochondria protein homolog OS=Culex quinquefasciatus GN=CPIJ001445 PE=3 SV=1 | Back alignment and function description |
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| >sp|B4JW99|CLU_DROGR Protein clueless OS=Drosophila grimshawi GN=clu PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | ||||||
| 255574960 | 1888 | eukaryotic translation initiation factor | 0.990 | 0.956 | 0.716 | 0.0 | |
| 359484809 | 1897 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.955 | 0.700 | 0.0 | |
| 356508390 | 1855 | PREDICTED: protein KIAA0664 homolog [Gly | 0.977 | 0.960 | 0.667 | 0.0 | |
| 356514495 | 1859 | PREDICTED: protein KIAA0664 homolog [Gly | 0.980 | 0.961 | 0.670 | 0.0 | |
| 449457963 | 1830 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.963 | 0.664 | 0.0 | |
| 449503183 | 1789 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.944 | 0.961 | 0.661 | 0.0 | |
| 334186990 | 1819 | tetratricopeptide repeat domain protein | 0.965 | 0.967 | 0.641 | 0.0 | |
| 297799170 | 1831 | hypothetical protein ARALYDRAFT_913715 [ | 0.964 | 0.960 | 0.635 | 0.0 | |
| 4455367 | 1791 | putative protein [Arabidopsis thaliana] | 0.911 | 0.927 | 0.604 | 0.0 | |
| 357137397 | 1762 | PREDICTED: protein KIAA0664 homolog [Bra | 0.923 | 0.954 | 0.557 | 0.0 |
| >gi|255574960|ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223532174|gb|EEF33979.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2583 bits (6696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1364/1905 (71%), Positives = 1516/1905 (79%), Gaps = 100/1905 (5%)
Query: 1 MAPKTGKAKPHKAKGEKKKKEEKVLPTVTEITVETPDESQVTLKGISTDRILDVRKLLGV 60
MAPKTGKAKPHKAKGEKKKKEEKVLP V EI++ETPD+SQVTLKGISTDRILDVRKLLGV
Sbjct: 1 MAPKTGKAKPHKAKGEKKKKEEKVLPAVIEISMETPDDSQVTLKGISTDRILDVRKLLGV 60
Query: 61 HVETCHLTSFTLSHEVRGSKLKDSVDVVSLKPCHLTVEEEDYSEEQAVAHIRRLLDIVAC 120
HVETCHLT+F+LSHE+RG +LKD+VD+VSLKPCHLT+ EEDY+EEQAV HIRRLLDIVAC
Sbjct: 61 HVETCHLTNFSLSHELRGPRLKDTVDIVSLKPCHLTILEEDYTEEQAVTHIRRLLDIVAC 120
Query: 121 T--------------NSFGASPKPPGRTSAGSNIESEPTSPNGGDSKPNKAGENRAGVCV 166
T NS +S K G T + + P G + KP G +
Sbjct: 121 TTSFGSSSSKPSGRANSRESSTKESGLTE--TELSQSDNGP-GANPKPKGGGSGDKKIGT 177
Query: 167 GHVAKSGKDTSEITEKGD--AVSMCPPPRLGQFYDFFSFSHLTPPLQYIRRSTRPFLEDK 224
+ + + E +EK D AVSMCPPPRLGQFYDFFSFSHLTPP+ YIRRSTRPFLEDK
Sbjct: 178 ANFKNAKEFGKEFSEKVDMAAVSMCPPPRLGQFYDFFSFSHLTPPVHYIRRSTRPFLEDK 237
Query: 225 TDDDFFQIDVRVCSGKPMTIVASREGFYPAGKRPLLFHSLVSLLQQISRPFDAAYKALMK 284
T+DD+FQIDVRVCSGKPMTIVAS++GFYPAGKR LL+HSLVSLLQQISR FDAAYKALMK
Sbjct: 238 TEDDYFQIDVRVCSGKPMTIVASKKGFYPAGKRTLLYHSLVSLLQQISRVFDAAYKALMK 297
Query: 285 AFTEHNKFGNLPYGFRANTWVVPPVVADNPSIFPHLPVEDENWGGSGGGQGRDGKHDNRQ 344
+FTEHNKFGNLPYGFRANTWVVPPVVADNPS+FP LPVEDENWGG+GGGQGRDGKHD R
Sbjct: 298 SFTEHNKFGNLPYGFRANTWVVPPVVADNPSVFPPLPVEDENWGGNGGGQGRDGKHDYRP 357
Query: 345 WAREFAILAAMPCKTAEERQIRDRKAFLLHSLFVDISLFKAVAAIKTLIESNQHSLNDPA 404
WA+EFAILAAMPCKTAEERQIRDRKAFLLHSLFVD+S+FKAVA IK ++E NQ+SLND
Sbjct: 358 WAKEFAILAAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVALIKQIVEKNQYSLNDST 417
Query: 405 ASIVHEERVGDLIIKVARDVPDASVKLDCKNDGSQVLGMSQKDLTQRNLLKGITADESTT 464
SI+HEE+VGDLIIKV RDVPDAS KLDCKNDGS+VLGMSQ+DL QRNLLKGITADES T
Sbjct: 418 PSILHEEKVGDLIIKVTRDVPDASTKLDCKNDGSRVLGMSQEDLAQRNLLKGITADESAT 477
Query: 465 IHDTSTLGVVIIRHSGYTAVVKVSAEVNWDGHPIPQDIDIEDQSEGGANALNVNSLRMLL 524
+HDTSTLGVV++RH GYTAVVKVSAEVNWDG+PIPQDIDIEDQ E GANALNVNSLRMLL
Sbjct: 478 VHDTSTLGVVVVRHCGYTAVVKVSAEVNWDGNPIPQDIDIEDQPEEGANALNVNSLRMLL 537
Query: 525 HKSSSPQSSSAFQRSQSTDFENLRSARSLVRKVIEDSLLKLQEEPSKHTRSIRWELGACW 584
HKSS+PQSSS QR Q+ D E+L SARSLVRKV+EDSLLKLQEE +K T+SIRWELGACW
Sbjct: 538 HKSSTPQSSSTIQRVQTGDSESLSSARSLVRKVLEDSLLKLQEESTKQTKSIRWELGACW 597
Query: 585 VQHLQNQASGKNESKKTEEPKLEPAVKGLGKQGALLKDIKKKTDGRINKTEQGKQVPADN 644
VQHLQNQASGK ESKK EE K EPAVKGLGKQGALLK+IKKK D R +KTE+GK V
Sbjct: 598 VQHLQNQASGKTESKKAEETKPEPAVKGLGKQGALLKEIKKKIDVRGSKTEEGKDVSV-G 656
Query: 645 NLDMNKKSDATDQKELEKRDEEMEELWKKLISESAYLRLKESETGLHLKSPDELIEMAHK 704
NLDMNKK DA +QKELEK++EEME +WK+L++E+AYLRLKESETGLHLK P ELIEMAH+
Sbjct: 657 NLDMNKKLDAVNQKELEKKEEEMEIMWKELLNEAAYLRLKESETGLHLKRPGELIEMAHR 716
Query: 705 YYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCVH 764
YYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLG VVELADKLPHVQSLC+H
Sbjct: 717 YYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLGLVVELADKLPHVQSLCIH 776
Query: 765 EMVVRAYKHILQAVVAAVDNVADLAASIAACLNIL------------------------- 799
EM+VRAYKHILQAVVAAV+N DLAASIA+CLNIL
Sbjct: 777 EMIVRAYKHILQAVVAAVNNADDLAASIASCLNILLGTPSAENEDVDILKDDQLKWKWVE 836
Query: 800 -----RFGWRWNHESCPDLRKFSILRGLSHKVGLELVPRDYDMDSESPFRKSDIISMVPV 854
RFGW W H+SC DLRKF+ILRGLSHKVGLEL+PRDYDMD+ PFRKSDIISMVPV
Sbjct: 837 TFLLKRFGWWWKHKSCQDLRKFAILRGLSHKVGLELLPRDYDMDTAYPFRKSDIISMVPV 896
Query: 855 YKHVACSSADGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLA 914
YKHVACSSADGRTLLESSKTSLDKGKLEDAVNYG+KALSKL++VCGPYHRMTAGAYSLLA
Sbjct: 897 YKHVACSSADGRTLLESSKTSLDKGKLEDAVNYGTKALSKLVAVCGPYHRMTAGAYSLLA 956
Query: 915 VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNR 974
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNR
Sbjct: 957 VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNR 1016
Query: 975 ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAA 1034
ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAA
Sbjct: 1017 ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAA 1076
Query: 1035 SYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEA 1094
SYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEA
Sbjct: 1077 SYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEA 1136
Query: 1095 ARNGTPKPDASISSKGHLSVSDLLDYIAPDTDSKARDAQRKARAKLKGKPGQTCETVSDE 1154
ARNGTPKPDASISSKGHLSVSDLLDYI PD D KAR+AQ+KARAK+KGKPGQ ETVSDE
Sbjct: 1137 ARNGTPKPDASISSKGHLSVSDLLDYITPDADMKAREAQKKARAKVKGKPGQNWETVSDE 1196
Query: 1155 YQKDEIVSPTSPVVENSSDKENKSEVHLLEPKIEKSDSGLPDQSIMIKNDDLEQEENSDE 1214
QKDE +SPT V ENSSDKENKSE E + EK+DS L DQ +M +NDD+ QE++SDE
Sbjct: 1197 AQKDETLSPTLTVAENSSDKENKSEAQFAETRNEKTDSSLTDQLLMNRNDDVIQEDDSDE 1256
Query: 1215 GWQEAVPKGRSLTARRSSGSRRPSLAKLDTNFTNVSQSSRYRGKPINFTSPKPIPSESAA 1274
GWQEAVPKGRS T+R++SGSRRPSLAKL+TNF N+SQSSR+R K NFTSP+ PS+S A
Sbjct: 1257 GWQEAVPKGRSPTSRKASGSRRPSLAKLNTNFMNLSQSSRFRAKAANFTSPRTSPSDSVA 1316
Query: 1275 TSGSNLPVPKKFVKSSSFSPKLQAASISTAGA------DKSSPASPASTDLLAKSAPAAS 1328
+ G +LP K SS Q S +TAG KS+PA+PASTD +AKSA AS
Sbjct: 1317 SPGPSLPA-PKKFSKSSSFSPKQNNSGATAGGTEKSINSKSAPATPASTDQVAKSALVAS 1375
Query: 1329 SMGVQAAGKLFSYKEVALAPPGTIVKAVAEQFPKGNPAIESSSQVNQEAAMSVVTPGDVT 1388
+ VQAAGKLFSYKEVALAPPGTIVKAV EQ PKGN E ++QVN + A+S V G VT
Sbjct: 1376 PISVQAAGKLFSYKEVALAPPGTIVKAVTEQLPKGNLPAEPTTQVNYDTAVSEVIVGGVT 1435
Query: 1389 AVKPAEENQLVVSEGETKYSVKEEEK--TEVRDSGETLQTKRDSALVDTA--------AK 1438
A++ AEE ++ EGE++ +E K ++V+ E+ + + +T K
Sbjct: 1436 ALRDAEEEKVQKLEGESQLHGSKERKSHSDVKHEAESGNLEVNEPREETKYAHTDHVEEK 1495
Query: 1439 AG-KEVIGAAVGTTNTEAGNVEVLGFENSDPLKNSNVNPSKIDGLESGSLQRCIEASPDL 1497
AG E A+V TN AGN VL EN D K+SN SKI+ L++ L ASPDL
Sbjct: 1496 AGVVESKTASVEVTNENAGNSAVLEHENLDS-KHSNTTSSKIEVLKTRELNDGT-ASPDL 1553
Query: 1498 EPQTILTEKSTLLPEQDASFPKGKV-TESPQELPNDDIGVNPLPAQVEKRDEVETVKETT 1556
E LL ++DA GK+ E +++ + P EK+DE E KETT
Sbjct: 1554 -------ENGALLLDKDALVTGGKLPGEDSKDVSDGSTIDKSFPTDGEKQDEAEIGKETT 1606
Query: 1557 TKLSAAAPPFNPSTVPVFGSIVVPAFKDHGGILPPPVNIPPMLKVNPVRRSPHQSATARV 1616
KLSAAAPPFNPSTVPVFGSI VP +KDHGGILPPPVNIPPML VNPVRRSPHQSATARV
Sbjct: 1607 KKLSAAAPPFNPSTVPVFGSITVPGYKDHGGILPPPVNIPPMLAVNPVRRSPHQSATARV 1666
Query: 1617 PYGPRLSGGYNRSGNRVPRKQLSFPNAEHTAEVNHFSPPRIMNPHAAEFVPSQPWIPNGY 1676
PYGPRLS +NRSGNRVPR + SF N EH + NHFSPPRIMNPHAAEFVP QPW+PNGY
Sbjct: 1667 PYGPRLSASFNRSGNRVPRNKPSFHNGEHNGDGNHFSPPRIMNPHAAEFVPGQPWVPNGY 1726
Query: 1677 PVS-------PNGMPVSPNSFAVSPNGVPFMPNGF---MNGMPLTQNGIPA-PIDSVDSV 1725
PVS PNGMPVSPN F +SP G+P NG+ +N +P+TQNG PA PI SV++
Sbjct: 1727 PVSANGYLANPNGMPVSPNGFPMSPPGLPVSSNGYPASLNAIPVTQNGFPASPISSVETP 1786
Query: 1726 GVIIVDVGAEINPD------DEKSSVENKVETQPTEQKPTEDSYVHNESNNPVVEEKPTD 1779
VD+ +E + E SS E E QP+EQK E +E +P EEKPT+
Sbjct: 1787 TSTSVDLDSENKTEAVTGDCTENSSTEVGAENQPSEQKCQEQP---DEKASPETEEKPTN 1843
Query: 1780 VAPVTS--GAVLAKDIFNDKPVEEKISKCWGDYSDSEAEIVEVTS 1822
+ P+TS AKD N VEEK SKCW DYSD EAE+VEVTS
Sbjct: 1844 IVPLTSDIDTPAAKDSCNSIVVEEKPSKCWADYSDGEAEVVEVTS 1888
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484809|ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356508390|ref|XP_003522940.1| PREDICTED: protein KIAA0664 homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|356514495|ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|449457963|ref|XP_004146717.1| PREDICTED: uncharacterized protein LOC101219343 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449503183|ref|XP_004161875.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101219343 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|334186990|ref|NP_194537.7| tetratricopeptide repeat domain protein [Arabidopsis thaliana] gi|332660036|gb|AEE85436.1| tetratricopeptide repeat domain protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297799170|ref|XP_002867469.1| hypothetical protein ARALYDRAFT_913715 [Arabidopsis lyrata subsp. lyrata] gi|297313305|gb|EFH43728.1| hypothetical protein ARALYDRAFT_913715 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|4455367|emb|CAB36777.1| putative protein [Arabidopsis thaliana] gi|7269662|emb|CAB79610.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357137397|ref|XP_003570287.1| PREDICTED: protein KIAA0664 homolog [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | ||||||
| TAIR|locus:2035327 | 1797 | AT1G01320 [Arabidopsis thalian | 0.412 | 0.418 | 0.483 | 0.0 | |
| TAIR|locus:2037783 | 1608 | AT1G15290 [Arabidopsis thalian | 0.259 | 0.294 | 0.630 | 0.0 | |
| UNIPROTKB|B4LQ23 | 1465 | clu "Protein clueless" [Drosop | 0.210 | 0.261 | 0.286 | 1.5e-51 | |
| DICTYBASE|DDB_G0292806 | 1320 | cluA "CluA protein" [Dictyoste | 0.154 | 0.213 | 0.308 | 7.3e-51 | |
| UNIPROTKB|B3MIW0 | 1450 | clu "Protein clueless" [Drosop | 0.168 | 0.211 | 0.291 | 1.3e-50 | |
| UNIPROTKB|B4JW99 | 1494 | clu "Protein clueless" [Drosop | 0.168 | 0.205 | 0.297 | 1.5e-50 | |
| UNIPROTKB|B4MY63 | 1441 | clu "Protein clueless" [Drosop | 0.169 | 0.214 | 0.305 | 3.2e-49 | |
| UNIPROTKB|B4KT50 | 1487 | clu "Protein clueless" [Drosop | 0.169 | 0.207 | 0.301 | 4.5e-49 | |
| FB|FBgn0034087 | 1448 | clu "clueless" [Drosophila mel | 0.150 | 0.189 | 0.292 | 1.4e-48 | |
| ZFIN|ZDB-GENE-061103-457 | 1400 | cluh "clustered mitochondria ( | 0.157 | 0.205 | 0.296 | 4.5e-47 |
| TAIR|locus:2035327 AT1G01320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1819 (645.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 377/779 (48%), Positives = 505/779 (64%)
Query: 24 VLPTVTEITVETPDESQVTLKGISTDRILDVRKLLGVHVETCHLTSFTLSHEVRGSKLKD 83
VLP + ++ V PDE++ LKGISTDRI+DVR+LL V+ +TCH+T+++LSHE+RGS+LKD
Sbjct: 21 VLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEIRGSRLKD 80
Query: 84 SVDVVSLKPCHLTVEEEDYSEEQAVAHIRRLLDIVACTNSFGASPKPPGRTSAGSNIESE 143
+VDV +LKPC LT+ EEDY+E AVAH+RRLLDIVACT FG SP+ +++S
Sbjct: 81 TVDVSALKPCVLTLTEEDYNEGTAVAHVRRLLDIVACTTCFGPSPEK------SDSVKSA 134
Query: 144 PTSPNGGDSKPNKAGENRAGVCVGHVAKSGKDTSEITEKGDAVSMCPPPRLGQFYDFFSF 203
G +SK + + + KDT + E G+ P +LG FY+FFS
Sbjct: 135 QVKGGGKNSKQSDTSPPPS--------PASKDTV-VDEAGETSHSFP--KLGSFYEFFSL 183
Query: 204 SHLTPPLQYIRRSTRPFLED-KTDDDFFQIDVRVCSGKPMTIVASREGFYPAGKRPLLFH 262
+HLTPPLQYIR +T+ ED +D IDV++C+GK + I R+GFY GK+ ++ H
Sbjct: 184 AHLTPPLQYIRLATKRETEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRIICH 243
Query: 263 SLVSLLQQISRPFDAAYKALMKAFTEHNKFGNLPYGFRANTWVVPPVVADNPSIFPHLPV 322
+LV LL+QISR FD AY L+KAF+E NKFGNLPYGFRANTW++PP A +P+ FP LPV
Sbjct: 244 NLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPV 303
Query: 323 EDENWXXXXXXXXXXXKHDNRQWAREFAILAAMPCKTAEERQIRDRKAFLLHSLFVDISL 382
EDE W +D W+ EFA +A+MPCKTAEERQ+RDRK FLLH+LFVD++
Sbjct: 304 EDERWGGDGGGQGRDGSYDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVAT 363
Query: 383 FKAVAAIKTLIESNQHSLNDPAASIVHEERVGDLIIKVARDVPDASVKLDCKNDGSQVLG 442
F+A+ A++ ++ + L + + +++ E V DL + V RD +AS K+D K DG Q G
Sbjct: 364 FRAIKAVQKVMA--EPVLAEEDSEVLYSETVRDLTVTVTRDTSNASSKVDTKIDGIQATG 421
Query: 443 MSQKDLTQRNLLKGITADESTTIHDTSTLGVVIIRHSGYTAVVKVSAEVNWDGHPIPQDI 502
+ +K L +RNLLKG+TADE+T HD +TLG + +++ GY AVVK+ E + P Q +
Sbjct: 422 LDKKKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYIAVVKLEKESE-ELSPPSQIV 480
Query: 503 DIEDQSEGGANALNVNSLRMLLHKXXXXXXXXXXXXXXXTDFENLRSARSLVRKVIEDSL 562
D+ +Q EGGANALN+NSLR LLHK + L S+R V K++E+S+
Sbjct: 481 DLLEQPEGGANALNINSLRFLLHKSSPEQNKKTPQQHD----DELTSSREFVSKMLEESI 536
Query: 563 LKLQEEPSKHTRSIRWELGACWVQHLQNQASGKNESKKT-EEPKLEPAVKGLGKQGALLK 621
KL+ E +RWELGACW+QHLQ+Q + + + K+T E+ K E V+GLGK L
Sbjct: 537 AKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKSKNELKVEGLGKPLKSLN 596
Query: 622 DIKKKTDGRINKTEQGKQVPADNNLDMNKKSDATDQXXXXXXXXXXXXXWKKLISESAYL 681
KKKTD KT Q + + + A+ Q K L+S++A+
Sbjct: 597 SSKKKTDVSSPKTPQTALSSQVDAVSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFT 656
Query: 682 RLKESETGLHLKSPDELIEMAHKYYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQ 741
RLKES+TGLH KS EL+++A YY + A+PKLVADFGSLELSPVDGRTLTDFMHTRGL+
Sbjct: 657 RLKESDTGLHHKSLQELVDLAQNYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLR 716
Query: 742 MCSLGRVVELADKLPHVQSLCVHEMVVRAYKHILQXXXXXXXXXXXXXX-SIAACLNIL 799
M SLG VV+L+DKL HVQSLCVHEM+VRA KHILQ +AA LN++
Sbjct: 717 MRSLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAVATDTDKIAIKVAAALNMM 775
|
|
| TAIR|locus:2037783 AT1G15290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4LQ23 clu "Protein clueless" [Drosophila virilis (taxid:7244)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0292806 cluA "CluA protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B3MIW0 clu "Protein clueless" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4JW99 clu "Protein clueless" [Drosophila grimshawi (taxid:7222)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4MY63 clu "Protein clueless" [Drosophila willistoni (taxid:7260)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4KT50 clu "Protein clueless" [Drosophila mojavensis (taxid:7230)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0034087 clu "clueless" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-061103-457 cluh "clustered mitochondria (cluA/CLU1) homolog" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1822 | |||
| pfam12807 | 169 | pfam12807, eIF3_p135, Translation initiation facto | 6e-39 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 1e-14 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 6e-13 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 4e-11 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 2e-10 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 2e-08 | |
| pfam13374 | 42 | pfam13374, TPR_10, Tetratricopeptide repeat | 4e-08 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 9e-08 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 2e-07 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 4e-07 | |
| pfam13374 | 42 | pfam13374, TPR_10, Tetratricopeptide repeat | 1e-06 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 1e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 3e-04 | |
| TIGR02521 | 234 | TIGR02521, type_IV_pilW, type IV pilus biogenesis/ | 0.003 |
| >gnl|CDD|221783 pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 6e-39
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 51/170 (30%)
Query: 719 GSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADK-LPHVQSLCVHEMVVRAYKHILQA 777
SLELSP+DG++LT+ +H RG+ M LG+V +LA K LPH++ LCV EM+ RA KHIL+
Sbjct: 1 ISLELSPMDGQSLTELLHRRGINMRYLGKVAKLASKRLPHLKRLCVSEMIARAAKHILRT 60
Query: 778 VVAAVDNVADLAASIAACLNIL-------------------------------------- 799
+ V DL+A+I+ LN L
Sbjct: 61 YLRGVP-APDLSAAISHFLNCLLGSESNPDPEAEIDESRSASYPEDDFAWEKLTPEELWS 119
Query: 800 --------RFGWRWNHESC---PDLRKFSILRGLSHKVGLELVPRDYDMD 838
RF + + L+K S+LR + KVG++L+ R+YD D
Sbjct: 120 EIEKEAKDRFRYELKEDWKDEQYGLQKISLLREICLKVGIQLLLREYDFD 169
|
Translation initiation factor eIF3 is a multi-subunit protein complex required for initiation of protein biosynthesis in eukaryotic cells. The complex promotes ribosome dissociation, the binding of the initiator methionyl-tRNA to the 40 S ribosomal subunit, and mRNA recruitment to the ribosome. The protein product from TIF31 genes in yeast is p135 which associates with the eIF3 but does not seem to be necessary for protein translation initiation. Length = 169 |
| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|205553 pfam13374, TPR_10, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205553 pfam13374, TPR_10, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
| >gnl|CDD|131573 TIGR02521, type_IV_pilW, type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1822 | |||
| KOG1839 | 1236 | consensus Uncharacterized protein CLU1/cluA/TIF31 | 100.0 | |
| PF13236 | 221 | CLU: Clustered mitochondria | 100.0 | |
| KOG1839 | 1236 | consensus Uncharacterized protein CLU1/cluA/TIF31 | 100.0 | |
| KOG1840 | 508 | consensus Kinesin light chain [Cytoskeleton] | 99.93 | |
| KOG1840 | 508 | consensus Kinesin light chain [Cytoskeleton] | 99.9 | |
| PF15044 | 76 | CLU_N: Mitochondrial function, CLU-N-term | 99.87 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.83 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.81 | |
| PF12807 | 169 | eIF3_p135: Translation initiation factor eIF3 subu | 99.81 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.7 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.61 | |
| KOG1130 | 639 | consensus Predicted G-alpha GTPase interaction pro | 99.53 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.5 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.45 | |
| KOG1130 | 639 | consensus Predicted G-alpha GTPase interaction pro | 99.43 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.42 | |
| PRK11788 | 389 | tetratricopeptide repeat protein; Provisional | 99.42 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 99.41 | |
| KOG2003 | 840 | consensus TPR repeat-containing protein [General f | 99.4 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.38 | |
| PRK11788 | 389 | tetratricopeptide repeat protein; Provisional | 99.35 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.34 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.34 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.34 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.33 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.32 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 99.3 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.3 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.28 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.27 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.26 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.26 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 99.26 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.26 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.26 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.24 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.24 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 99.19 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 99.18 | |
| KOG1129 | 478 | consensus TPR repeat-containing protein [General f | 99.18 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.17 | |
| PF05303 | 108 | DUF727: Protein of unknown function (DUF727); Inte | 99.1 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.08 | |
| PRK04841 | 903 | transcriptional regulator MalT; Provisional | 99.07 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.05 | |
| PF13424 | 78 | TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 | 99.04 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.04 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.03 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.03 | |
| PF13424 | 78 | TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 | 99.02 | |
| KOG2003 | 840 | consensus TPR repeat-containing protein [General f | 99.02 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 99.02 | |
| PF14938 | 282 | SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 | 99.0 | |
| KOG1129 | 478 | consensus TPR repeat-containing protein [General f | 98.99 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 98.98 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 98.98 | |
| PF14938 | 282 | SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 | 98.97 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 98.96 | |
| PRK04841 | 903 | transcriptional regulator MalT; Provisional | 98.95 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 98.9 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.89 | |
| cd05804 | 355 | StaR_like StaR_like; a well-conserved protein foun | 98.88 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 98.87 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 98.86 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 98.86 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.85 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.81 | |
| cd05804 | 355 | StaR_like StaR_like; a well-conserved protein foun | 98.8 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 98.78 | |
| COG2956 | 389 | Predicted N-acetylglucosaminyl transferase [Carboh | 98.78 | |
| COG2956 | 389 | Predicted N-acetylglucosaminyl transferase [Carboh | 98.75 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 98.75 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 98.74 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 98.74 | |
| TIGR00540 | 409 | hemY_coli hemY protein. This is an uncharacterized | 98.72 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 98.71 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 98.71 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.71 | |
| KOG1941 | 518 | consensus Acetylcholine receptor-associated protei | 98.69 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 98.67 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 98.67 | |
| KOG1941 | 518 | consensus Acetylcholine receptor-associated protei | 98.67 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 98.64 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 98.64 | |
| PRK14574 | 822 | hmsH outer membrane protein; Provisional | 98.6 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 98.6 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 98.6 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 98.59 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 98.58 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 98.58 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 98.57 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 98.55 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 98.55 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 98.55 | |
| KOG1174 | 564 | consensus Anaphase-promoting complex (APC), subuni | 98.54 | |
| PF13525 | 203 | YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M | 98.53 | |
| TIGR00540 | 409 | hemY_coli hemY protein. This is an uncharacterized | 98.53 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 98.52 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 98.51 | |
| KOG1174 | 564 | consensus Anaphase-promoting complex (APC), subuni | 98.49 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 98.48 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 98.47 | |
| PRK10866 | 243 | outer membrane biogenesis protein BamD; Provisiona | 98.46 | |
| PRK14574 | 822 | hmsH outer membrane protein; Provisional | 98.45 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 98.44 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 98.41 | |
| KOG2376 | 652 | consensus Signal recognition particle, subunit Srp | 98.41 | |
| PRK14720 | 906 | transcript cleavage factor/unknown domain fusion p | 98.39 | |
| COG4783 | 484 | Putative Zn-dependent protease, contains TPR repea | 98.39 | |
| PLN02789 | 320 | farnesyltranstransferase | 98.39 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 98.39 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 98.38 | |
| PLN02789 | 320 | farnesyltranstransferase | 98.36 | |
| KOG2376 | 652 | consensus Signal recognition particle, subunit Srp | 98.36 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 98.35 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 98.34 | |
| PF09976 | 145 | TPR_21: Tetratricopeptide repeat; InterPro: IPR018 | 98.32 | |
| KOG1156 | 700 | consensus N-terminal acetyltransferase [Chromatin | 98.32 | |
| KOG0495 | 913 | consensus HAT repeat protein [RNA processing and m | 98.32 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 98.31 | |
| KOG1585 | 308 | consensus Protein required for fusion of vesicles | 98.27 | |
| PF12569 | 517 | NARP1: NMDA receptor-regulated protein 1 ; InterPr | 98.27 | |
| PF09976 | 145 | TPR_21: Tetratricopeptide repeat; InterPro: IPR018 | 98.27 | |
| PF12688 | 120 | TPR_5: Tetratrico peptide repeat | 98.18 | |
| PLN03077 | 857 | Protein ECB2; Provisional | 98.17 | |
| PRK10153 | 517 | DNA-binding transcriptional activator CadC; Provis | 98.13 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 98.13 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 98.12 | |
| PF12688 | 120 | TPR_5: Tetratrico peptide repeat | 98.11 | |
| PLN03077 | 857 | Protein ECB2; Provisional | 98.11 | |
| PF13525 | 203 | YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M | 98.1 | |
| KOG3617 | 1416 | consensus WD40 and TPR repeat-containing protein [ | 98.07 | |
| KOG1585 | 308 | consensus Protein required for fusion of vesicles | 98.06 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 98.04 | |
| PRK14720 | 906 | transcript cleavage factor/unknown domain fusion p | 98.04 | |
| KOG1128 | 777 | consensus Uncharacterized conserved protein, conta | 98.03 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 98.01 | |
| KOG1128 | 777 | consensus Uncharacterized conserved protein, conta | 98.01 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 98.0 | |
| KOG0495 | 913 | consensus HAT repeat protein [RNA processing and m | 97.99 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 97.98 | |
| PRK11906 | 458 | transcriptional regulator; Provisional | 97.97 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 97.94 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 97.93 | |
| KOG1156 | 700 | consensus N-terminal acetyltransferase [Chromatin | 97.92 | |
| KOG3060 | 289 | consensus Uncharacterized conserved protein [Funct | 97.92 | |
| PRK10866 | 243 | outer membrane biogenesis protein BamD; Provisiona | 97.91 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 97.89 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 97.88 | |
| KOG4340 | 459 | consensus Uncharacterized conserved protein [Funct | 97.87 | |
| PF12569 | 517 | NARP1: NMDA receptor-regulated protein 1 ; InterPr | 97.86 | |
| KOG3617 | 1416 | consensus WD40 and TPR repeat-containing protein [ | 97.86 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 97.82 | |
| KOG1127 | 1238 | consensus TPR repeat-containing protein [RNA proce | 97.8 | |
| PRK10153 | 517 | DNA-binding transcriptional activator CadC; Provis | 97.72 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 97.71 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 97.7 | |
| COG2909 | 894 | MalT ATP-dependent transcriptional regulator [Tran | 97.63 | |
| KOG1127 | 1238 | consensus TPR repeat-containing protein [RNA proce | 97.63 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 97.63 | |
| PF04733 | 290 | Coatomer_E: Coatomer epsilon subunit; InterPro: IP | 97.62 | |
| COG3071 | 400 | HemY Uncharacterized enzyme of heme biosynthesis [ | 97.62 | |
| COG4783 | 484 | Putative Zn-dependent protease, contains TPR repea | 97.59 | |
| KOG1586 | 288 | consensus Protein required for fusion of vesicles | 97.57 | |
| PF13374 | 42 | TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT | 97.55 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 97.55 | |
| PF13374 | 42 | TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT | 97.53 | |
| COG0457 | 291 | NrfG FOG: TPR repeat [General function prediction | 97.53 | |
| COG3071 | 400 | HemY Uncharacterized enzyme of heme biosynthesis [ | 97.49 | |
| KOG4340 | 459 | consensus Uncharacterized conserved protein [Funct | 97.48 | |
| KOG2300 | 629 | consensus Uncharacterized conserved protein [Funct | 97.47 | |
| PF09295 | 395 | ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter | 97.46 | |
| COG4105 | 254 | ComL DNA uptake lipoprotein [General function pred | 97.45 | |
| COG1729 | 262 | Uncharacterized protein conserved in bacteria [Fun | 97.44 | |
| KOG3060 | 289 | consensus Uncharacterized conserved protein [Funct | 97.43 | |
| KOG2300 | 629 | consensus Uncharacterized conserved protein [Funct | 97.43 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 97.41 | |
| COG0457 | 291 | NrfG FOG: TPR repeat [General function prediction | 97.4 | |
| COG4700 | 251 | Uncharacterized protein conserved in bacteria cont | 97.36 | |
| COG1729 | 262 | Uncharacterized protein conserved in bacteria [Fun | 97.35 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 97.35 | |
| KOG3785 | 557 | consensus Uncharacterized conserved protein [Funct | 97.32 | |
| KOG1586 | 288 | consensus Protein required for fusion of vesicles | 97.31 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 97.3 | |
| PF09295 | 395 | ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter | 97.3 | |
| COG2909 | 894 | MalT ATP-dependent transcriptional regulator [Tran | 97.29 | |
| PRK11906 | 458 | transcriptional regulator; Provisional | 97.27 | |
| KOG3785 | 557 | consensus Uncharacterized conserved protein [Funct | 97.25 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 97.25 | |
| KOG1070 | 1710 | consensus rRNA processing protein Rrp5 [RNA proces | 97.24 | |
| COG4785 | 297 | NlpI Lipoprotein NlpI, contains TPR repeats [Gener | 97.24 | |
| PF04184 | 539 | ST7: ST7 protein; InterPro: IPR007311 The ST7 (for | 97.21 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 97.2 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 97.18 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 97.15 | |
| PF08631 | 278 | SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: | 97.12 | |
| KOG2047 | 835 | consensus mRNA splicing factor [RNA processing and | 97.1 | |
| PF10300 | 468 | DUF3808: Protein of unknown function (DUF3808); In | 97.1 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 97.07 | |
| KOG3616 | 1636 | consensus Selective LIM binding factor [Transcript | 97.06 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 97.05 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 97.05 | |
| KOG2047 | 835 | consensus mRNA splicing factor [RNA processing and | 96.97 | |
| PF12968 | 144 | DUF3856: Domain of Unknown Function (DUF3856); Int | 96.97 | |
| PF12968 | 144 | DUF3856: Domain of Unknown Function (DUF3856); Int | 96.92 | |
| PF04733 | 290 | Coatomer_E: Coatomer epsilon subunit; InterPro: IP | 96.9 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 96.84 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 96.81 | |
| KOG3081 | 299 | consensus Vesicle coat complex COPI, epsilon subun | 96.78 | |
| PF10345 | 608 | Cohesin_load: Cohesin loading factor; InterPro: IP | 96.75 | |
| COG5159 | 421 | RPN6 26S proteasome regulatory complex component [ | 96.74 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 96.72 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 96.7 | |
| PF14559 | 68 | TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN | 96.68 | |
| KOG1070 | 1710 | consensus rRNA processing protein Rrp5 [RNA proces | 96.67 | |
| COG4700 | 251 | Uncharacterized protein conserved in bacteria cont | 96.62 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 96.61 | |
| PF09986 | 214 | DUF2225: Uncharacterized protein conserved in bact | 96.56 | |
| KOG2796 | 366 | consensus Uncharacterized conserved protein [Funct | 96.52 | |
| PF14559 | 68 | TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN | 96.51 | |
| PF03704 | 146 | BTAD: Bacterial transcriptional activator domain; | 96.5 | |
| PF10300 | 468 | DUF3808: Protein of unknown function (DUF3808); In | 96.43 | |
| COG4785 | 297 | NlpI Lipoprotein NlpI, contains TPR repeats [Gener | 96.41 | |
| COG3898 | 531 | Uncharacterized membrane-bound protein [Function u | 96.39 | |
| PF09986 | 214 | DUF2225: Uncharacterized protein conserved in bact | 96.33 | |
| COG4105 | 254 | ComL DNA uptake lipoprotein [General function pred | 96.32 | |
| PF03704 | 146 | BTAD: Bacterial transcriptional activator domain; | 96.31 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 96.29 | |
| KOG1915 | 677 | consensus Cell cycle control protein (crooked neck | 96.24 | |
| KOG3081 | 299 | consensus Vesicle coat complex COPI, epsilon subun | 96.18 | |
| PF10345 | 608 | Cohesin_load: Cohesin loading factor; InterPro: IP | 96.16 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 96.14 | |
| KOG3616 | 1636 | consensus Selective LIM binding factor [Transcript | 96.1 | |
| PF13281 | 374 | DUF4071: Domain of unknown function (DUF4071) | 95.89 | |
| PF04184 | 539 | ST7: ST7 protein; InterPro: IPR007311 The ST7 (for | 95.82 | |
| COG3118 | 304 | Thioredoxin domain-containing protein [Posttransla | 95.8 | |
| PF10602 | 177 | RPN7: 26S proteasome subunit RPN7; InterPro: IPR01 | 95.79 | |
| PF08631 | 278 | SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: | 95.64 | |
| KOG2796 | 366 | consensus Uncharacterized conserved protein [Funct | 95.63 | |
| KOG2471 | 696 | consensus TPR repeat-containing protein [General f | 95.55 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 95.55 | |
| KOG2041 | 1189 | consensus WD40 repeat protein [General function pr | 95.55 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 95.38 | |
| KOG2610 | 491 | consensus Uncharacterized conserved protein [Funct | 95.38 | |
| PF10602 | 177 | RPN7: 26S proteasome subunit RPN7; InterPro: IPR01 | 95.36 | |
| COG0790 | 292 | FOG: TPR repeat, SEL1 subfamily [General function | 95.28 | |
| KOG2610 | 491 | consensus Uncharacterized conserved protein [Funct | 95.21 | |
| COG2976 | 207 | Uncharacterized protein conserved in bacteria [Fun | 95.05 | |
| KOG0985 | 1666 | consensus Vesicle coat protein clathrin, heavy cha | 95.04 | |
| KOG2041 | 1189 | consensus WD40 repeat protein [General function pr | 95.02 | |
| KOG2471 | 696 | consensus TPR repeat-containing protein [General f | 94.98 | |
| cd01807 | 74 | GDX_N ubiquitin-like domain of GDX. GDX contains a | 94.98 | |
| PF11817 | 247 | Foie-gras_1: Foie gras liver health family 1; Inte | 94.97 | |
| PF12862 | 94 | Apc5: Anaphase-promoting complex subunit 5 | 94.9 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 94.89 | |
| KOG1915 | 677 | consensus Cell cycle control protein (crooked neck | 94.84 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 94.82 | |
| PF04910 | 360 | Tcf25: Transcriptional repressor TCF25; InterPro: | 94.82 | |
| KOG1464 | 440 | consensus COP9 signalosome, subunit CSN2 [Posttran | 94.74 | |
| PF12862 | 94 | Apc5: Anaphase-promoting complex subunit 5 | 94.72 | |
| KOG3965 | 160 | consensus Uncharacterized conserved protein [Funct | 94.68 | |
| KOG1463 | 411 | consensus 26S proteasome regulatory complex, subun | 94.66 | |
| cd01802 | 103 | AN1_N ubiquitin-like domain of AN1. AN1 (also know | 94.66 | |
| PF00244 | 236 | 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 | 94.65 | |
| PTZ00044 | 76 | ubiquitin; Provisional | 94.62 | |
| PF13176 | 36 | TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ | 94.5 | |
| PF13176 | 36 | TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ | 94.36 | |
| cd01798 | 70 | parkin_N amino-terminal ubiquitin-like of parkin p | 94.33 | |
| cd01810 | 74 | ISG15_repeat2 ISG15 ubiquitin-like protein, second | 94.28 | |
| KOG1464 | 440 | consensus COP9 signalosome, subunit CSN2 [Posttran | 94.23 | |
| cd01794 | 70 | DC_UbP_C dendritic cell derived ubiquitin-like pro | 94.13 | |
| PF05843 | 280 | Suf: Suppressor of forked protein (Suf); InterPro: | 94.08 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 94.03 | |
| PF06552 | 186 | TOM20_plant: Plant specific mitochondrial import r | 93.97 | |
| PF00515 | 34 | TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 | 93.94 | |
| cd01806 | 76 | Nedd8 Nebb8-like ubiquitin protein. Nedd8 (also kn | 93.76 | |
| KOG1550 | 552 | consensus Extracellular protein SEL-1 and related | 93.64 | |
| PF13281 | 374 | DUF4071: Domain of unknown function (DUF4071) | 93.62 | |
| COG0790 | 292 | FOG: TPR repeat, SEL1 subfamily [General function | 93.56 | |
| cd01804 | 78 | midnolin_N Ubiquitin-like domain of midnolin. midn | 93.55 | |
| PF08626 | 1185 | TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC | 93.48 | |
| COG2976 | 207 | Uncharacterized protein conserved in bacteria [Fun | 93.34 | |
| PF00515 | 34 | TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 | 93.31 | |
| PF06552 | 186 | TOM20_plant: Plant specific mitochondrial import r | 93.29 | |
| cd01792 | 80 | ISG15_repeat1 ISG15 ubiquitin-like protein, first | 93.15 | |
| cd01808 | 71 | hPLIC_N Ubiquitin-like domain of hPLIC-1 and hPLIC | 93.03 | |
| PF13428 | 44 | TPR_14: Tetratricopeptide repeat | 92.99 | |
| cd01809 | 72 | Scythe_N Ubiquitin-like domain of Scythe protein. | 92.97 | |
| PF13428 | 44 | TPR_14: Tetratricopeptide repeat | 92.96 | |
| PF07719 | 34 | TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 | 92.94 | |
| COG3898 | 531 | Uncharacterized membrane-bound protein [Function u | 92.69 | |
| cd01805 | 77 | RAD23_N Ubiquitin-like domain of RAD23. RAD23 belo | 92.57 | |
| PF13431 | 34 | TPR_17: Tetratricopeptide repeat | 92.56 | |
| PF05843 | 280 | Suf: Suppressor of forked protein (Suf); InterPro: | 92.52 | |
| KOG4322 | 482 | consensus Anaphase-promoting complex (APC), subuni | 92.4 | |
| PF07719 | 34 | TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 | 92.31 | |
| COG3118 | 304 | Thioredoxin domain-containing protein [Posttransla | 92.27 | |
| cd01797 | 78 | NIRF_N amino-terminal ubiquitin-like domain of Np9 | 92.13 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 92.09 | |
| cd01793 | 74 | Fubi Fubi ubiquitin-like protein. Fubi is a ubiqui | 92.05 | |
| PF04910 | 360 | Tcf25: Transcriptional repressor TCF25; InterPro: | 91.99 | |
| PF13431 | 34 | TPR_17: Tetratricopeptide repeat | 91.93 | |
| cd01803 | 76 | Ubiquitin Ubiquitin. Ubiquitin (includes Ubq/RPL40 | 91.84 | |
| PF13181 | 34 | TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ | 91.83 | |
| PF00240 | 69 | ubiquitin: Ubiquitin family; InterPro: IPR000626 U | 91.81 | |
| KOG0985 | 1666 | consensus Vesicle coat protein clathrin, heavy cha | 91.56 | |
| KOG1550 | 552 | consensus Extracellular protein SEL-1 and related | 91.51 | |
| PF12739 | 414 | TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex | 91.45 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 91.36 | |
| KOG3783 | 546 | consensus Uncharacterized conserved protein [Funct | 91.28 | |
| PF13181 | 34 | TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ | 91.16 | |
| COG5159 | 421 | RPN6 26S proteasome regulatory complex component [ | 91.14 | |
| KOG4814 | 872 | consensus Uncharacterized conserved protein [Funct | 90.7 | |
| KOG2053 | 932 | consensus Mitochondrial inheritance and actin cyto | 90.68 | |
| KOG2561 | 568 | consensus Adaptor protein NUB1, contains UBA domai | 90.52 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 90.46 | |
| cd01812 | 71 | BAG1_N Ubiquitin-like domain of BAG1. BAG1_N N-ter | 90.42 | |
| KOG4814 | 872 | consensus Uncharacterized conserved protein [Funct | 90.25 | |
| KOG4563 | 400 | consensus Cell cycle-regulated histone H1-binding | 90.19 | |
| cd01763 | 87 | Sumo Small ubiquitin-related modifier (SUMO). Smal | 90.04 | |
| KOG4322 | 482 | consensus Anaphase-promoting complex (APC), subuni | 89.92 | |
| KOG1914 | 656 | consensus mRNA cleavage and polyadenylation factor | 89.79 | |
| PF08424 | 321 | NRDE-2: NRDE-2, necessary for RNA interference; In | 89.58 | |
| KOG4507 | 886 | consensus Uncharacterized conserved protein, conta | 89.42 | |
| PF08626 | 1185 | TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC | 89.33 | |
| cd01796 | 71 | DDI1_N DNA damage inducible protein 1 ubiquitin-li | 89.24 | |
| PF12739 | 414 | TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex | 89.23 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 89.16 | |
| KOG4014 | 248 | consensus Uncharacterized conserved protein (conta | 88.97 | |
| smart00101 | 244 | 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat | 88.63 | |
| KOG4507 | 886 | consensus Uncharacterized conserved protein, conta | 88.51 | |
| PF11817 | 247 | Foie-gras_1: Foie gras liver health family 1; Inte | 88.26 | |
| KOG2581 | 493 | consensus 26S proteasome regulatory complex, subun | 88.25 | |
| cd01790 | 79 | Herp_N Homocysteine-responsive endoplasmic reticul | 87.86 | |
| KOG4014 | 248 | consensus Uncharacterized conserved protein (conta | 87.86 | |
| PF08424 | 321 | NRDE-2: NRDE-2, necessary for RNA interference; In | 87.85 | |
| KOG2053 | 932 | consensus Mitochondrial inheritance and actin cyto | 87.28 | |
| PF00244 | 236 | 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 | 87.28 | |
| PF11207 | 203 | DUF2989: Protein of unknown function (DUF2989); In | 87.19 | |
| KOG1914 | 656 | consensus mRNA cleavage and polyadenylation factor | 86.95 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 86.52 | |
| KOG0686 | 466 | consensus COP9 signalosome, subunit CSN1 [Posttran | 86.51 | |
| PF10579 | 80 | Rapsyn_N: Rapsyn N-terminal myristoylation and lin | 86.41 | |
| cd01791 | 73 | Ubl5 UBL5 ubiquitin-like modifier. UBL5 (also know | 86.35 | |
| PF10952 | 140 | DUF2753: Protein of unknown function (DUF2753); In | 86.2 | |
| PF10579 | 80 | Rapsyn_N: Rapsyn N-terminal myristoylation and lin | 86.02 | |
| KOG0890 | 2382 | consensus Protein kinase of the PI-3 kinase family | 85.75 | |
| KOG2581 | 493 | consensus 26S proteasome regulatory complex, subun | 85.61 | |
| smart00213 | 64 | UBQ Ubiquitin homologues. Ubiquitin-mediated prote | 85.49 | |
| PF04781 | 111 | DUF627: Protein of unknown function (DUF627); Inte | 85.12 | |
| PF11207 | 203 | DUF2989: Protein of unknown function (DUF2989); In | 84.52 | |
| cd01770 | 79 | p47_UBX p47-like ubiquitin domain. p47_UBX p47 is | 84.07 | |
| PF04190 | 260 | DUF410: Protein of unknown function (DUF410) ; Int | 83.96 | |
| PF00789 | 82 | UBX: UBX domain; InterPro: IPR001012 The UBX domai | 83.9 | |
| PF09670 | 379 | Cas_Cas02710: CRISPR-associated protein (Cas_Cas02 | 83.86 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 83.84 | |
| KOG1463 | 411 | consensus 26S proteasome regulatory complex, subun | 83.54 | |
| TIGR00601 | 378 | rad23 UV excision repair protein Rad23. All protei | 83.44 | |
| KOG1538 | 1081 | consensus Uncharacterized conserved protein WDR10, | 83.37 | |
| KOG2561 | 568 | consensus Adaptor protein NUB1, contains UBA domai | 83.34 | |
| PF10516 | 38 | SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetrat | 82.88 | |
| cd01767 | 77 | UBX UBX (ubiquitin regulatory X) domain. The UBX ( | 82.84 | |
| PF10516 | 38 | SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetrat | 82.56 | |
| KOG0687 | 393 | consensus 26S proteasome regulatory complex, subun | 81.64 | |
| PF04190 | 260 | DUF410: Protein of unknown function (DUF410) ; Int | 81.43 | |
| PF07079 | 549 | DUF1347: Protein of unknown function (DUF1347); In | 81.43 | |
| PF11976 | 72 | Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; Inter | 81.39 | |
| PF10952 | 140 | DUF2753: Protein of unknown function (DUF2753); In | 81.28 | |
| KOG0010 | 493 | consensus Ubiquitin-like protein [Posttranslationa | 80.76 | |
| PF13174 | 33 | TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ | 80.24 | |
| KOG2422 | 665 | consensus Uncharacterized conserved protein [Funct | 80.17 | |
| PF15015 | 569 | NYD-SP12_N: Spermatogenesis-associated, N-terminal | 80.01 |
| >KOG1839 consensus Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-121 Score=1167.46 Aligned_cols=992 Identities=23% Similarity=0.285 Sum_probs=801.7
Q ss_pred CCceEEEEEECCCCCeeEEEecCcchHHHHHHHhhhcccccccccccccccccCcccCCccccccc---C-CceEEEecc
Q 000230 25 LPTVTEITVETPDESQVTLKGISTDRILDVRKLLGVHVETCHLTSFTLSHEVRGSKLKDSVDVVSL---K-PCHLTVEEE 100 (1822)
Q Consensus 25 ~~~~~~itV~~P~~~~i~l~~~~~d~V~dvrq~L~~~~~Tc~~T~fsL~~e~~G~~L~d~~el~~l---k-~~~L~lVee 100 (1822)
.....+|+|..|....+.+++.+++.||||||+|++++.|||+|||+|. +++..|++|.++..| + +|+|.||.+
T Consensus 29 ~~~~~~~~i~p~~~~~~~~~l~~~~~v~~~~q~l~~~~~t~~~tc~~L~--~~~~~~d~~~~~~~i~~~~~~~~l~~v~~ 106 (1236)
T KOG1839|consen 29 GDAKSDINIQPSTGGLLSFELSSFSKVQDVRQVLLDRPLTCYITCLSLL--LDESKLDYFHIKKKISSGKPGCVLASVLG 106 (1236)
T ss_pred ccccccccccCCCCCceEEEecCcchhhhHHHHHhcccccCceeEEEEE--ecccccccccceeeecCCCcceEEEEecc
Confidence 3466778888888889999999999999999999999999999999996 688999999998875 2 599999999
Q ss_pred CCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccc
Q 000230 101 DYSEEQAVAHIRRLLDIVACTNSFGASPKPPGRTSAGSNIESEPTSPNGGDSKPNKAGENRAGVCVGHVAKSGKDTSEIT 180 (1822)
Q Consensus 101 pYte~~Ar~Hvrrvrdl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1822)
|||+|+||.||++|||||... .|. +......+...+.......+.++.+ . ......+|.+|.++.
T Consensus 107 pY~~re~~~Hv~~vrdlL~~~-~~~--sa~~~~~~a~~~~~~~~~i~~~~~~----~--------t~~~p~d~~~~~~~l 171 (1236)
T KOG1839|consen 107 PYTPREARLHVHSVRDLLSSS-DFA--SAYSPLMKAFFDHNKLGNIPLGDRK----N--------TWVDPEDCKPPFPDL 171 (1236)
T ss_pred cCChHHHHHHHHHHHHHHhcC-Chh--hhhcchhhhhhhhccccCCCccccc----c--------CCCCccccCCCCCCC
Confidence 999999999999999999422 111 1122222222222222222211111 0 122335688889999
Q ss_pred ccCCCCCCCC------CCcccCcccccccccCCCCchhhhccccccccccCCCCeEEEEEEEeCCccEEEEEeCcccccC
Q 000230 181 EKGDAVSMCP------PPRLGQFYDFFSFSHLTPPLQYIRRSTRPFLEDKTDDDFFQIDVRVCSGKPMTIVASREGFYPA 254 (1822)
Q Consensus 181 ~~~~~~~l~~------~pk~~~~~k~~s~S~~nPPp~~~r~~~~~~~~~~~~Gdl~yl~v~t~egk~~~Ita~~~GFy~~ 254 (1822)
|+.+++.+++ .||..+|+++|+||+|||||++| +++||+|||+|+|+||+.||||||++|||+|
T Consensus 172 p~~~e~~~~~~~~~~~~~~~~~~~~~La~sp~nppp~~~----------~~~g~l~yL~v~t~e~~~~~it~~~~gfyvN 241 (1236)
T KOG1839|consen 172 PGEDERWGGDGGEGRSGPKWAKCFRVLAFSPCNPPPERR----------VLDGDLFYLHVVTLEGSVFHITAIIKGFYVN 241 (1236)
T ss_pred CccccccCCCCCcCCCCcccchHHHHHhcCCCCCCCcce----------eecccEEEEEEEEeeccEEEEEEeeeeEEEe
Confidence 9999988753 36889999999999999999985 4599999999999999999999999999975
Q ss_pred C----------C-CCcccchHHHHHHhhCHHHHHHHHHHHHHHhccCCCcCCCCcccCcccccCCccCCCCCCCCCCCCc
Q 000230 255 G----------K-RPLLFHSLVSLLQQISRPFDAAYKALMKAFTEHNKFGNLPYGFRANTWVVPPVVADNPSIFPHLPVE 323 (1822)
Q Consensus 255 ~----------~-~~~~~HsLv~LL~qiSp~F~~~f~~l~k~~~~~~~f~~~p~~~~~~~Wl~p~~~~~~~~~~~~~~~e 323 (1822)
. . .++++|||++||++|||.|+++|..++|+++++|+|+|++++|+.++|++++..|..|+ ++++
T Consensus 242 ns~~~~fdP~p~~~~~ls~sl~~ll~~~S~kfkk~~~~~~~~~s~~~~~er~~~~~~~~sw~~~~~~~~~d~----~r~~ 317 (1236)
T KOG1839|consen 242 NSQSSKFDPSPSGSGDLSHSLIRLLASLSPKFKKAFQTILKKLSSEELAERVLLKTPDESWIVHPLPHLADA----ARAE 317 (1236)
T ss_pred ccccCCCCCCCCCCccchhhHHHHHHhhChHHHHHHHHHHHHHhhhhHHHhccccCCCccccccCCCchHHH----HhhH
Confidence 2 1 35899999999999999999999999999999999999999999999999998876554 4555
Q ss_pred cccC--CCCCCCCCCCCCCCCcchHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhhccCCCCCC
Q 000230 324 DENW--GGSGGGQGRDGKHDNRQWAREFAILAAMPCKTAEERQIRDRKAFLLHSLFVDISLFKAVAAIKTLIESNQHSLN 401 (1822)
Q Consensus 324 d~~~--~~~~~g~g~d~~~~~RDWNeEfQ~l~eLP~~t~~ER~~RdR~ifkl~sdFVdaA~~gA~~VI~g~v~~n~~~in 401 (1822)
+... ..+.+|+ .||||||||++||||+++++||++|+|.++||+.||+++|++|||+||++++ .+||
T Consensus 318 ~A~~~~~~~~~G~-------~rdwNee~Qt~re~~~~~l~dr~~rer~~~Kv~~df~~~a~~Ga~~vi~~ni----~ain 386 (1236)
T KOG1839|consen 318 EALTGYYLEHIGY-------TRDWNEELQTTREMPHKDLPDRGARERNLNKVRGDFVKAATRGALAVISGNI----VAIN 386 (1236)
T ss_pred HHhccceeccCcc-------ccchhhhhhhhhhcCccccchhhhhhhccccchhhhcccccccccccccCcc----ccCC
Confidence 5432 3356666 5999999999999999999999999999999999999999999999998877 7899
Q ss_pred CCCCCcceeEEECCEEEEEeecCCCccccccccCCCCcccCchHHhHHHhhhhcccchhccCCCCCCcccceEEEeecCc
Q 000230 402 DPAASIVHEERVGDLIIKVARDVPDASVKLDCKNDGSQVLGMSQKDLTQRNLLKGITADESTTIHDTSTLGVVIIRHSGY 481 (1822)
Q Consensus 402 p~~~~~~~~~~~~nIff~~a~D~~d~~~~~d~k~~G~~~~g~~~A~~Aa~n~LKGv~a~~~~dv~gL~tlgtvvVDYrGy 481 (1822)
|.++..+|||+|+||||+.++|++++| +..| |+.+|+.|+++||+|++.|+.+|++||+||||++||||||
T Consensus 387 p~e~~~~qm~i~~nIf~s~~~dv~~~y-----~~~g----~dvaa~~a~s~dl~g~r~~n~~d~~~l~~Lgt~~vDy~g~ 457 (1236)
T KOG1839|consen 387 PEEPTILQMFIWNNIFFSEGFDVRGHY-----KLGG----GDVAAYAAPSTDLNGKRLYNTVDVPGLKTLGTTVVDYRGY 457 (1236)
T ss_pred CchHHHHHHHHHhhhheeeeccccccc-----cccc----hhHHhhhhccccccccccccccchhhhcchhheeeeccCc
Confidence 999999999999999999999999997 3334 5559999999999999999999999999999999999999
Q ss_pred EEEEE--E-cc--cccCCCCCCCCCccccccCCCCCcccchhhHHHhhcccCCCCCCcccccc------------ccCCc
Q 000230 482 TAVVK--V-SA--EVNWDGHPIPQDIDIEDQSEGGANALNVNSLRMLLHKSSSPQSSSAFQRS------------QSTDF 544 (1822)
Q Consensus 482 Rvvaq--v-Pg--~~~~~~s~vygsidi~~~~egG~~~~~~~~l~~llhk~~~~~~s~~~~~~------------~~~d~ 544 (1822)
||+|| + || ...+.++++||+++. |++++..+.+..++....... .+.+| .+.++
T Consensus 458 rv~Aq~i~~p~~l~~d~~~~~~~g~~~~------~K~~~~~e~~~~l~~~~s~~l---~i~~h~~i~~~d~~~~eL~~s~ 528 (1236)
T KOG1839|consen 458 RVVAQVIINPGILEGDQSQSVIYGPVDE------GKELLSEEAYQRLLERASKLL---LISPHPVINAKDTVLPELGISF 528 (1236)
T ss_pred eEEEEeecCCcchhcccccceeeccccc------cccccccHHHHHhhccccccc---ccCCccccchhhcccccccccc
Confidence 99999 6 66 555778899999984 788888888877776554432 12222 34568
Q ss_pred chhhhhchhhhHHHHhHHhhccC-----------CC----CCcccccchhhHHHHHHHHHhhhccccccccCcCCCcchh
Q 000230 545 ENLRSARSLVRKVIEDSLLKLQE-----------EP----SKHTRSIRWELGACWVQHLQNQASGKNESKKTEEPKLEPA 609 (1822)
Q Consensus 545 e~~~~~~~~~R~y~~d~~~~l~~-----------e~----~~~~~~LRpELv~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 609 (1822)
+++++.+.|+|+|++|+++..+. +. |...++|||||+.+|++|+........+....+....+..
T Consensus 529 eskgi~g~DgR~yllDL~~t~Pld~~~L~~~~~~~~~~k~pHkl~~lr~Eli~~f~~~~l~~~i~~~e~~~~~~~~ds~~ 608 (1236)
T KOG1839|consen 529 ESKGISGVDGRHYLLDLMHTRPLDLNFLGVEAVEELAEKYPHKLSLLRPELILKFYEHRLLAFIVAVENAAEDYGFDSSN 608 (1236)
T ss_pred ccccccCCCcchhHHHHHhccCCcccccchhhhhhccccCchhhhhcCHHHHHHHHHHHHHHHHHHHhcchhhccCCccc
Confidence 99999999999999999865543 11 2235799999999999997544333222211101111100
Q ss_pred hhccCcccchhhhhhccccccccccccCCCCCCCCCcccccCCCCchhhhhhhchHHHHHHHHH-------hhcHHHHhh
Q 000230 610 VKGLGKQGALLKDIKKKTDGRINKTEQGKQVPADNNLDMNKKSDATDQKELEKRDEEMEELWKK-------LISESAYLR 682 (1822)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ee~~~~~~~-------~l~~~a~~r 682 (1822)
.++.........-.+...+... ...+.......|+. +....+..+. -++++.|..
T Consensus 609 ~~~~~d~~~~~~v~~l~~~is~----d~~eS~~~~~~dav--------------~~~~~al~k~~~~~~~~~fnp~~f~s 670 (1236)
T KOG1839|consen 609 PFKKSDAIGLVPVHKLVNCISA----DGRESSKLSLDDAV--------------KYATKALVKLVAVCGPYGFNPAGFYS 670 (1236)
T ss_pred cccccchhhHHHHHHHHHhhcc----ccccccccchHHHH--------------HHHHHHHHHHHhhhcccccCcccccc
Confidence 0000000000000000000000 00000000000000 0000001111 122222222
Q ss_pred ----hcccccccCCCChHHHHHHHHHHHhhcchHHHHHHhccCCCCCCChhhHHHHHHHhhhhhhccchHHHHhhc----
Q 000230 683 ----LKESETGLHLKSPDELIEMAHKYYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADK---- 754 (1822)
Q Consensus 683 ----l~~~~~~~~~k~~eq~v~~A~~~L~~~~IP~~V~dl~~l~~~P~Dg~sLte~LH~rGINmRyLGkVa~la~~---- 754 (1822)
+-.++-...+..++|.+.++.+|+....||.+++++.++.+.|+||++|+++||..|+|+||||++++.+..
T Consensus 671 ~~v~~~~t~~~~~a~~~~qk~~d~~Erll~~~iPd~~Ks~~d~sv~p~dgq~l~~aL~~~g~n~ryLg~~~~~~~~~~~a 750 (1236)
T KOG1839|consen 671 LAVVLYHTEDFNQAAIQQQKVLDINERLLGLDIPDTMKSYGDLSVFPYDGQHLELALHYVGRNLRYLGKTCGLSHPNTAA 750 (1236)
T ss_pred CceEecCccccchhhhhhHhHHHHHHHHhccccchhHHhccccceeeecccHHHHHHHHhhHHHHHhhccccccCccccc
Confidence 111222222456788999999999999999999999999999999999999999999999999999987632
Q ss_pred ---CchhhhhhHHHHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHhhh--------------------h-----------
Q 000230 755 ---LPHVQSLCVHEMVVRAYKHILQAVVAAVDNVADLAASIAACLNIL--------------------R----------- 800 (1822)
Q Consensus 755 ---L~~lk~L~~~EmiaRaaKhILr~~l~~v~~~~~ls~~IA~~LN~L--------------------r----------- 800 (1822)
+.++..++..|.++|++||+|+.+++.++. .+++.+++|+|||+ +
T Consensus 751 ~~~~v~l~~l~~~ei~~RslKhvlK~~~r~l~~-~~i~ta~SH~ln~~ls~~~~av~~~~t~~~~~ka~~~~~~~~~~g~ 829 (1236)
T KOG1839|consen 751 TYINVALMELGVGEIALRSLKHVLKDNLRLLGA-DHIQTAASHALNCLLSVMEAAVQKEQTTLEILKAKDLRTQDAAAGT 829 (1236)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHhhcccccCCCccchHHHHhhhhhhhhhhccCC
Confidence 457888999999999999999999999874 58899999999999 1
Q ss_pred ------------hc----ccccc-----------C--------CCchhhhHHHHHhhhhhhhhccccccccCCCC---Cc
Q 000230 801 ------------FG----WRWNH-----------E--------SCPDLRKFSILRGLSHKVGLELVPRDYDMDSE---SP 842 (1822)
Q Consensus 801 ------------f~----~~~~~-----------~--------~~~~l~k~~LLrel~~k~GLql~~r~Y~f~~a---~p 842 (1822)
+. |.|.. . ......++...+..|++.+|+...+.|.+... ..
T Consensus 830 ~k~~~S~~s~~~l~~s~L~~~I~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~r~~~~e~~~~ks~ 909 (1236)
T KOG1839|consen 830 PKPDASISSKGHLSVSDLLKYITADSKNKFTAAHDVKSRETILLKNGKSKIAVEKLEKKKRELQKPARNYDFESSEPKSE 909 (1236)
T ss_pred CCcccccccccccchhHHHHhccccccccccchhhhhHHHHHhhhcccchhHHHHHHHHhhhcchhhhhccccccCCCCC
Confidence 00 01100 0 00133467888999999999999999999884 78
Q ss_pred CcHhhHHHHhHHHHhhhcCChhHHHHHHHHHHHHHcCChHHHHHHHHhhhhhhhhccCCCchhHHHHHHHHHHHHHHcCC
Q 000230 843 FRKSDIISMVPVYKHVACSSADGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGD 922 (1822)
Q Consensus 843 f~~eDI~~alpvvK~l~~~s~~A~~L~~lG~~~~~~G~yeeAie~~~eAL~l~~~i~G~dhp~~a~al~nLA~ly~~lGd 922 (1822)
|..+||.++.|++|+..+...++....+.|+....+|.+.+|.+ .-+++.++.+++|..|++++.+|..|+.++..+|+
T Consensus 910 f~~~Di~~~~p~ik~s~P~~~~a~~~~e~gq~~~~e~~~~~~~~-~~~slnl~~~v~~~~h~~~~~~~~~La~l~~~~~d 988 (1236)
T KOG1839|consen 910 FNDSDILNLRPVIKHSSPTVSEAKDSPEQGQEALLEDGFSEAYE-LPESLNLLNNVMGVLHPEVASKYRSLAKLSNRLGD 988 (1236)
T ss_pred CCcccccccccccccCCCccchhhhhhhhhhhhhcccchhhhhh-hhhhhhHHHHhhhhcchhHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 000230 923 FNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEE 1002 (1822)
Q Consensus 923 ~eeAle~~qkAL~i~er~lG~dhp~ta~ay~nLA~iy~~lG~~eeAl~~~~rAL~l~~~i~G~dhP~~a~al~nLA~iy~ 1002 (1822)
+++|+.+.++|..+++|++|.+|+.+...|.+|+.+++..++...|+..+.++++++...+|++||.++.+..|++.+++
T Consensus 989 ~~~Ai~~~~ka~ii~eR~~g~ds~~t~~~y~nlal~~f~~~~~~~al~~~~ra~~l~~Ls~ge~hP~~a~~~~nle~l~~ 1068 (1236)
T KOG1839|consen 989 NQEAIAQQRKACIISERVLGKDSPNTKLAYGNLALYEFAVKNLSGALKSLNRALKLKLLSSGEDHPPTALSFINLELLLL 1068 (1236)
T ss_pred hHHHHHhcccceeeechhccCCCHHHHHHhhHHHHHHHhccCccchhhhHHHHHHhhccccCCCCCchhhhhhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 000230 1003 GLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLE 1082 (1822)
Q Consensus 1003 ~lGd~eeAl~~leeALei~~~~~G~dhp~tA~~l~nLA~~y~~lGd~eeAi~~lekAL~I~k~~LG~dhp~t~~a~~~L~ 1082 (1822)
..++++.|+++++.|+.+...++|+.+..++.+++.+|+++..+++++.|+.+.+.++.||+..+|++|.+++++..|+.
T Consensus 1069 ~v~e~d~al~~le~A~a~~~~v~g~~~l~~~~~~~~~a~l~~s~~dfr~al~~ek~t~~iy~~qlg~~hsrt~~S~~~~~ 1148 (1236)
T KOG1839|consen 1069 GVEEADTALRYLESALAKNKKVLGPKELETALSYHALARLFESMKDFRNALEHEKVTYGIYKEQLGPDHSRTKESSEWLN 1148 (1236)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCccchhhhhHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhCCCcccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 000230 1083 YFESKALEQQEAAR 1096 (1822)
Q Consensus 1083 ~l~qqAl~~qeAl~ 1096 (1822)
..+++++.+|+++.
T Consensus 1149 ~~T~~~v~~Qk~~~ 1162 (1236)
T KOG1839|consen 1149 LSTAIAVKIQKKLL 1162 (1236)
T ss_pred HhhHHHHHHHHHHH
Confidence 99999999888763
|
|
| >PF13236 CLU: Clustered mitochondria | Back alignment and domain information |
|---|
| >KOG1839 consensus Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1840 consensus Kinesin light chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1840 consensus Kinesin light chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15044 CLU_N: Mitochondrial function, CLU-N-term | Back alignment and domain information |
|---|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12807 eIF3_p135: Translation initiation factor eIF3 subunit 135 | Back alignment and domain information |
|---|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
| >KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
| >KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >PRK11788 tetratricopeptide repeat protein; Provisional | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2003 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK11788 tetratricopeptide repeat protein; Provisional | Back alignment and domain information |
|---|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1129 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05303 DUF727: Protein of unknown function (DUF727); InterPro: IPR007967 This family consists of several uncharacterised eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
| >PRK04841 transcriptional regulator MalT; Provisional | Back alignment and domain information |
|---|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H | Back alignment and domain information |
|---|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H | Back alignment and domain information |
|---|
| >KOG2003 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A | Back alignment and domain information |
|---|
| >KOG1129 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A | Back alignment and domain information |
|---|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
| >PRK04841 transcriptional regulator MalT; Provisional | Back alignment and domain information |
|---|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals | Back alignment and domain information |
|---|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals | Back alignment and domain information |
|---|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
| >COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
| >TIGR00540 hemY_coli hemY protein | Back alignment and domain information |
|---|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] | Back alignment and domain information |
|---|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14574 hmsH outer membrane protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A | Back alignment and domain information |
|---|
| >TIGR00540 hemY_coli hemY protein | Back alignment and domain information |
|---|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
| >KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
| >PRK10866 outer membrane biogenesis protein BamD; Provisional | Back alignment and domain information |
|---|
| >PRK14574 hmsH outer membrane protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
| >KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
| >PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function | Back alignment and domain information |
|---|
| >KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG0495 consensus HAT repeat protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala | Back alignment and domain information |
|---|
| >PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function | Back alignment and domain information |
|---|
| >PF12688 TPR_5: Tetratrico peptide repeat | Back alignment and domain information |
|---|
| >PLN03077 Protein ECB2; Provisional | Back alignment and domain information |
|---|
| >PRK10153 DNA-binding transcriptional activator CadC; Provisional | Back alignment and domain information |
|---|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
| >PF12688 TPR_5: Tetratrico peptide repeat | Back alignment and domain information |
|---|
| >PLN03077 Protein ECB2; Provisional | Back alignment and domain information |
|---|
| >PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A | Back alignment and domain information |
|---|
| >KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
| >KOG0495 consensus HAT repeat protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
| >PRK11906 transcriptional regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
| >KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG3060 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK10866 outer membrane biogenesis protein BamD; Provisional | Back alignment and domain information |
|---|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4340 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala | Back alignment and domain information |
|---|
| >KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
| >KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10153 DNA-binding transcriptional activator CadC; Provisional | Back alignment and domain information |
|---|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
| >COG2909 MalT ATP-dependent transcriptional regulator [Transcription] | Back alignment and domain information |
|---|
| >KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A | Back alignment and domain information |
|---|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
| >PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A | Back alignment and domain information |
|---|
| >COG0457 NrfG FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >KOG4340 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2300 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi | Back alignment and domain information |
|---|
| >COG4105 ComL DNA uptake lipoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >COG1729 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG3060 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2300 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
| >COG0457 NrfG FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >COG1729 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
| >KOG3785 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi | Back alignment and domain information |
|---|
| >COG2909 MalT ATP-dependent transcriptional regulator [Transcription] | Back alignment and domain information |
|---|
| >PRK11906 transcriptional regulator; Provisional | Back alignment and domain information |
|---|
| >KOG3785 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene | Back alignment and domain information |
|---|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] | Back alignment and domain information |
|---|
| >KOG2047 consensus mRNA splicing factor [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans | Back alignment and domain information |
|---|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3616 consensus Selective LIM binding factor [Transcription] | Back alignment and domain information |
|---|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >KOG2047 consensus mRNA splicing factor [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF12968 DUF3856: Domain of Unknown Function (DUF3856); InterPro: IPR024552 This domain of unknown function is found in a small group of tetratricopeptide-like proteins, which includes the uncharacterised protein Q8KAL8 from SWISSPROT | Back alignment and domain information |
|---|
| >PF12968 DUF3856: Domain of Unknown Function (DUF3856); InterPro: IPR024552 This domain of unknown function is found in a small group of tetratricopeptide-like proteins, which includes the uncharacterised protein Q8KAL8 from SWISSPROT | Back alignment and domain information |
|---|
| >PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10345 Cohesin_load: Cohesin loading factor; InterPro: IPR019440 Cohesin loading factor is a conserved protein that has been characterised in fungi | Back alignment and domain information |
|---|
| >COG5159 RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A | Back alignment and domain information |
|---|
| >KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function | Back alignment and domain information |
|---|
| >KOG2796 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A | Back alignment and domain information |
|---|
| >PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production | Back alignment and domain information |
|---|
| >PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans | Back alignment and domain information |
|---|
| >COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >COG3898 Uncharacterized membrane-bound protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function | Back alignment and domain information |
|---|
| >COG4105 ComL DNA uptake lipoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10345 Cohesin_load: Cohesin loading factor; InterPro: IPR019440 Cohesin loading factor is a conserved protein that has been characterised in fungi | Back alignment and domain information |
|---|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3616 consensus Selective LIM binding factor [Transcription] | Back alignment and domain information |
|---|
| >PF13281 DUF4071: Domain of unknown function (DUF4071) | Back alignment and domain information |
|---|
| >PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene | Back alignment and domain information |
|---|
| >COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF10602 RPN7: 26S proteasome subunit RPN7; InterPro: IPR019585 This entry represents the regulatory subunit RPN7 (known as the non-ATPase regulatory subunit 6 in higher eukaryotes) of the 26S proteasome | Back alignment and domain information |
|---|
| >PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] | Back alignment and domain information |
|---|
| >KOG2796 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2471 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2041 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2610 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10602 RPN7: 26S proteasome subunit RPN7; InterPro: IPR019585 This entry represents the regulatory subunit RPN7 (known as the non-ATPase regulatory subunit 6 in higher eukaryotes) of the 26S proteasome | Back alignment and domain information |
|---|
| >COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2610 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG2976 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2041 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2471 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd01807 GDX_N ubiquitin-like domain of GDX | Back alignment and domain information |
|---|
| >PF11817 Foie-gras_1: Foie gras liver health family 1; InterPro: IPR021773 Mutating the gene foie gras in zebrafish has been shown to affect development; the mutants develop large, lipid-filled hepatocytes in the liver, resembling those in individuals with fatty liver disease [] | Back alignment and domain information |
|---|
| >PF12862 Apc5: Anaphase-promoting complex subunit 5 | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04910 Tcf25: Transcriptional repressor TCF25; InterPro: IPR006994 This entry appears to represent a novel family of basic helix-loop-helix (bHLH) proteins that control differentiation and development of a variety of organs [, ] | Back alignment and domain information |
|---|
| >KOG1464 consensus COP9 signalosome, subunit CSN2 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12862 Apc5: Anaphase-promoting complex subunit 5 | Back alignment and domain information |
|---|
| >KOG3965 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1463 consensus 26S proteasome regulatory complex, subunit RPN6/PSMD11 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01802 AN1_N ubiquitin-like domain of AN1 | Back alignment and domain information |
|---|
| >PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] | Back alignment and domain information |
|---|
| >PTZ00044 ubiquitin; Provisional | Back alignment and domain information |
|---|
| >PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A | Back alignment and domain information |
|---|
| >PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A | Back alignment and domain information |
|---|
| >cd01798 parkin_N amino-terminal ubiquitin-like of parkin protein | Back alignment and domain information |
|---|
| >cd01810 ISG15_repeat2 ISG15 ubiquitin-like protein, second repeat of 2 | Back alignment and domain information |
|---|
| >KOG1464 consensus COP9 signalosome, subunit CSN2 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01794 DC_UbP_C dendritic cell derived ubiquitin-like protein | Back alignment and domain information |
|---|
| >PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins | Back alignment and domain information |
|---|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins | Back alignment and domain information |
|---|
| >PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >cd01806 Nedd8 Nebb8-like ubiquitin protein | Back alignment and domain information |
|---|
| >KOG1550 consensus Extracellular protein SEL-1 and related proteins [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13281 DUF4071: Domain of unknown function (DUF4071) | Back alignment and domain information |
|---|
| >COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] | Back alignment and domain information |
|---|
| >cd01804 midnolin_N Ubiquitin-like domain of midnolin | Back alignment and domain information |
|---|
| >PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway | Back alignment and domain information |
|---|
| >COG2976 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins | Back alignment and domain information |
|---|
| >cd01792 ISG15_repeat1 ISG15 ubiquitin-like protein, first repeat of 2 | Back alignment and domain information |
|---|
| >cd01808 hPLIC_N Ubiquitin-like domain of hPLIC-1 and hPLIC2 | Back alignment and domain information |
|---|
| >PF13428 TPR_14: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >cd01809 Scythe_N Ubiquitin-like domain of Scythe protein | Back alignment and domain information |
|---|
| >PF13428 TPR_14: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >COG3898 Uncharacterized membrane-bound protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01805 RAD23_N Ubiquitin-like domain of RAD23 | Back alignment and domain information |
|---|
| >PF13431 TPR_17: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins | Back alignment and domain information |
|---|
| >KOG4322 consensus Anaphase-promoting complex (APC), subunit 5 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01797 NIRF_N amino-terminal ubiquitin-like domain of Np95 and NIRF | Back alignment and domain information |
|---|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
| >cd01793 Fubi Fubi ubiquitin-like protein | Back alignment and domain information |
|---|
| >PF04910 Tcf25: Transcriptional repressor TCF25; InterPro: IPR006994 This entry appears to represent a novel family of basic helix-loop-helix (bHLH) proteins that control differentiation and development of a variety of organs [, ] | Back alignment and domain information |
|---|
| >PF13431 TPR_17: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >cd01803 Ubiquitin Ubiquitin | Back alignment and domain information |
|---|
| >PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A | Back alignment and domain information |
|---|
| >PF00240 ubiquitin: Ubiquitin family; InterPro: IPR000626 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade | Back alignment and domain information |
|---|
| >KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1550 consensus Extracellular protein SEL-1 and related proteins [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12739 TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex 85 kDa subunit; InterPro: IPR024420 This entry represents Trs85, a subunit of the TRAPP III complex [] | Back alignment and domain information |
|---|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3783 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A | Back alignment and domain information |
|---|
| >COG5159 RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4814 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2561 consensus Adaptor protein NUB1, contains UBA domain [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd01812 BAG1_N Ubiquitin-like domain of BAG1 | Back alignment and domain information |
|---|
| >KOG4814 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4563 consensus Cell cycle-regulated histone H1-binding protein [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd01763 Sumo Small ubiquitin-related modifier (SUMO) | Back alignment and domain information |
|---|
| >KOG4322 consensus Anaphase-promoting complex (APC), subunit 5 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4507 consensus Uncharacterized conserved protein, contains TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway | Back alignment and domain information |
|---|
| >cd01796 DDI1_N DNA damage inducible protein 1 ubiquitin-like domain | Back alignment and domain information |
|---|
| >PF12739 TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex 85 kDa subunit; InterPro: IPR024420 This entry represents Trs85, a subunit of the TRAPP III complex [] | Back alignment and domain information |
|---|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4014 consensus Uncharacterized conserved protein (contains TPR repeat) [Function unknown] | Back alignment and domain information |
|---|
| >smart00101 14_3_3 14-3-3 homologues | Back alignment and domain information |
|---|
| >KOG4507 consensus Uncharacterized conserved protein, contains TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PF11817 Foie-gras_1: Foie gras liver health family 1; InterPro: IPR021773 Mutating the gene foie gras in zebrafish has been shown to affect development; the mutants develop large, lipid-filled hepatocytes in the liver, resembling those in individuals with fatty liver disease [] | Back alignment and domain information |
|---|
| >KOG2581 consensus 26S proteasome regulatory complex, subunit RPN3/PSMD3 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01790 Herp_N Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein | Back alignment and domain information |
|---|
| >KOG4014 consensus Uncharacterized conserved protein (contains TPR repeat) [Function unknown] | Back alignment and domain information |
|---|
| >PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] | Back alignment and domain information |
|---|
| >PF11207 DUF2989: Protein of unknown function (DUF2989); InterPro: IPR021372 Some members in this bacterial family of proteins are annotated as lipoproteins however this cannot be confirmed | Back alignment and domain information |
|---|
| >KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0686 consensus COP9 signalosome, subunit CSN1 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF10579 Rapsyn_N: Rapsyn N-terminal myristoylation and linker region; InterPro: IPR019568 Neuromuscular junction formation relies upon the clustering of acetylcholine receptors and other proteins in the muscle membrane | Back alignment and domain information |
|---|
| >cd01791 Ubl5 UBL5 ubiquitin-like modifier | Back alignment and domain information |
|---|
| >PF10952 DUF2753: Protein of unknown function (DUF2753); InterPro: IPR020206 This entry represents a group of uncharacterised proteins | Back alignment and domain information |
|---|
| >PF10579 Rapsyn_N: Rapsyn N-terminal myristoylation and linker region; InterPro: IPR019568 Neuromuscular junction formation relies upon the clustering of acetylcholine receptors and other proteins in the muscle membrane | Back alignment and domain information |
|---|
| >KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG2581 consensus 26S proteasome regulatory complex, subunit RPN3/PSMD3 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00213 UBQ Ubiquitin homologues | Back alignment and domain information |
|---|
| >PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF11207 DUF2989: Protein of unknown function (DUF2989); InterPro: IPR021372 Some members in this bacterial family of proteins are annotated as lipoproteins however this cannot be confirmed | Back alignment and domain information |
|---|
| >cd01770 p47_UBX p47-like ubiquitin domain | Back alignment and domain information |
|---|
| >PF04190 DUF410: Protein of unknown function (DUF410) ; InterPro: IPR007317 This is a family of conserved eukaryotic proteins with undetermined function | Back alignment and domain information |
|---|
| >PF00789 UBX: UBX domain; InterPro: IPR001012 The UBX domain is found in ubiquitin-regulatory proteins, which are members of the ubiquitination pathway, as well as a number of other proteins including FAF-1 (FAS-associated factor 1), the human Rep-8 reproduction protein and several hypothetical proteins from yeast | Back alignment and domain information |
|---|
| >PF09670 Cas_Cas02710: CRISPR-associated protein (Cas_Cas02710) | Back alignment and domain information |
|---|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1463 consensus 26S proteasome regulatory complex, subunit RPN6/PSMD11 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR00601 rad23 UV excision repair protein Rad23 | Back alignment and domain information |
|---|
| >KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2561 consensus Adaptor protein NUB1, contains UBA domain [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >cd01767 UBX UBX (ubiquitin regulatory X) domain | Back alignment and domain information |
|---|
| >PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >KOG0687 consensus 26S proteasome regulatory complex, subunit RPN7/PSMD6 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04190 DUF410: Protein of unknown function (DUF410) ; InterPro: IPR007317 This is a family of conserved eukaryotic proteins with undetermined function | Back alignment and domain information |
|---|
| >PF07079 DUF1347: Protein of unknown function (DUF1347); InterPro: IPR010764 This family consists of several hypothetical bacterial proteins of around 610 residues in length | Back alignment and domain information |
|---|
| >PF11976 Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; InterPro: IPR022617 This entry includes small ubiquitin-related modifier (SUMO) proteins | Back alignment and domain information |
|---|
| >PF10952 DUF2753: Protein of unknown function (DUF2753); InterPro: IPR020206 This entry represents a group of uncharacterised proteins | Back alignment and domain information |
|---|
| >KOG0010 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
| >PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A | Back alignment and domain information |
|---|
| >KOG2422 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF15015 NYD-SP12_N: Spermatogenesis-associated, N-terminal | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1822 | ||||
| 3nf1_A | 311 | Crystal Structure Of The Tpr Domain Of Kinesin Ligh | 1e-08 | ||
| 3nf1_A | 311 | Crystal Structure Of The Tpr Domain Of Kinesin Ligh | 7e-08 | ||
| 3ceq_A | 283 | The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc | 2e-06 | ||
| 3ceq_A | 283 | The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc | 2e-04 | ||
| 3edt_B | 283 | Crystal Structure Of The Mutated S328n Hklc2 Tpr Do | 2e-06 | ||
| 3edt_B | 283 | Crystal Structure Of The Mutated S328n Hklc2 Tpr Do | 2e-04 | ||
| 2fo7_A | 136 | Crystal Structure Of An 8 Repeat Consensus Tpr Supe | 8e-04 |
| >pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain 1 Length = 311 | Back alignment and structure |
|
| >pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain 1 Length = 311 | Back alignment and structure |
| >pdb|3CEQ|A Chain A, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2) Length = 283 | Back alignment and structure |
| >pdb|3CEQ|A Chain A, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2) Length = 283 | Back alignment and structure |
| >pdb|3EDT|B Chain B, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain Length = 283 | Back alignment and structure |
| >pdb|3EDT|B Chain B, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain Length = 283 | Back alignment and structure |
| >pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) Length = 136 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-36
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 3/220 (1%)
Query: 877 DKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDI 936
+G+ E AV +AL L G H A ++LA+V + A AL I
Sbjct: 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAI 98
Query: 937 NERELGLDHPDTMKSYGDLAVFYYRL-QHTELALKYVNRALYLLHLTCGPSHPNTAATYI 995
E+ LG DHP + +LAV Y + ++ E A RAL + G HP+ A
Sbjct: 99 REKTLGKDHPAVAATLNNLAVLYGKRGKYKE-AEPLCKRALEIREKVLGKDHPDVAKQLN 157
Query: 996 NVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQH 1055
N+A++ + G Y AL+ Q LG D A + + +A + +
Sbjct: 158 NLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETL 217
Query: 1056 EQTTLQILQAK-LGSEDLRTQDAAAWLEYFESKALEQQEA 1094
+ L + GS D + E E +Q++
Sbjct: 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDG 257
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} Length = 203 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} Length = 208 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3tax_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; thiocarbamate crosslink, covalent inhibitor, gylcosyltransfe inhibitor, O-GLCNAC transferase; HET: UDP; 1.88A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* Length = 723 | Back alignment and structure |
|---|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} Length = 225 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568 | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568 | Back alignment and structure |
|---|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Length = 293 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} Length = 117 | Back alignment and structure |
|---|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} Length = 117 | Back alignment and structure |
|---|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Length = 243 | Back alignment and structure |
|---|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Length = 243 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Length = 275 | Back alignment and structure |
|---|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Length = 275 | Back alignment and structure |
|---|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* Length = 213 | Back alignment and structure |
|---|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 Length = 292 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} Length = 177 | Back alignment and structure |
|---|
| >3ugm_A TAL effector avrbs3/PTHA; TAL effector; 3.00A {Xanthomonas oryzae} Length = 1047 | Back alignment and structure |
|---|
| >3ugm_A TAL effector avrbs3/PTHA; TAL effector; 3.00A {Xanthomonas oryzae} Length = 1047 | Back alignment and structure |
|---|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 Length = 121 | Back alignment and structure |
|---|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A Length = 125 | Back alignment and structure |
|---|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A Length = 125 | Back alignment and structure |
|---|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} Length = 112 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1822 | ||||
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 8e-12 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 4e-10 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 8e-08 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 2e-10 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 1e-09 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 0.001 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 2e-06 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 4e-05 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 0.001 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 0.002 | |
| d1qqea_ | 290 | a.118.8.1 (A:) Vesicular transport protein sec17 { | 8e-06 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 8e-06 | |
| d1zbpa1 | 264 | e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {V | 1e-04 | |
| d1tjca_ | 95 | a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subuni | 2e-04 | |
| d1ya0a1 | 497 | a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [T | 7e-04 | |
| d1ya0a1 | 497 | a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [T | 0.003 | |
| d1sgoa_ | 139 | d.82.3.1 (A:) Hypothetical protein c14orf129, hspc | 0.002 |
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.0 bits (162), Expect = 8e-12
Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 32/172 (18%)
Query: 876 LDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALD 935
++G ++ A++ +A+ AY LA L G +A AL
Sbjct: 248 YEQGLIDLAIDTYRRAIE--------LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 299
Query: 936 INERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYI 995
P S +LA + E A++ +AL + P AA +
Sbjct: 300 --------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHS 343
Query: 996 NVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLME 1047
N+A + + G + AL + EA++ + A +Y + L M+
Sbjct: 344 NLASVLQQQGKLQEALMHYKEAIRISPTF--------ADAYSNMGNTLKEMQ 387
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 290 | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} Length = 264 | Back information, alignment and structure |
|---|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 497 | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 497 | Back information, alignment and structure |
|---|
| >d1sgoa_ d.82.3.1 (A:) Hypothetical protein c14orf129, hspc210 {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1822 | |||
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.7 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.7 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.69 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 99.69 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.61 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 99.59 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.57 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.56 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.49 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.49 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.45 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.34 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.19 | |
| d1sgoa_ | 139 | Hypothetical protein c14orf129, hspc210 {Human (Ho | 99.16 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.1 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.06 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.05 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.03 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 98.99 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.99 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 98.97 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.95 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 98.95 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.94 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.91 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.9 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 98.9 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 98.89 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 98.87 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 98.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 98.83 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 98.8 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 98.78 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.73 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 98.73 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 98.66 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.63 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.59 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 98.51 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.46 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.33 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.31 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.27 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 98.23 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.18 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.17 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.13 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.12 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 98.09 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.05 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 97.8 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.06 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 96.72 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 95.23 | |
| d1bt0a_ | 73 | Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxI | 93.12 | |
| d1j8ca_ | 103 | Ubiquitin-like N-terminal domain of PLIC-2 {Human | 93.09 | |
| d1z2ma1 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 93.06 | |
| d1ttna1 | 80 | Dendritic cell-derived ubiquitin-like protein {Hum | 92.78 | |
| d1yqba1 | 84 | Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | 92.33 | |
| d1z2ma2 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 92.06 | |
| d1wiaa_ | 95 | Ubiquitin-like protein bab25500 (2010008E23Rik) {M | 91.77 | |
| d1wh3a_ | 87 | 2'-5'-oligoadenylate synthetase-like protein, OASL | 91.66 | |
| d1wx9a1 | 73 | Large proline-rich protein BAT3 {Human (Homo sapie | 91.62 | |
| d1v2ya_ | 105 | Ubiquitin-like protein 3300001g02rik {Mouse (Mus m | 91.17 | |
| d1uela_ | 95 | Ubiquitin-like domain of Rad23 homolog B (Hhr23B) | 90.25 | |
| d1wx8a1 | 83 | 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090] | 90.09 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 90.05 | |
| d1m94a_ | 73 | Ubiquitin-like modifier protein hub1 {Baker's yeas | 89.77 | |
| d1oqya4 | 77 | Ubiquitin-like domain of Rad23 homolog A (Hhr23a) | 89.07 | |
| d2bwfa1 | 73 | DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 88.95 | |
| d1ogwa_ | 76 | Ubiquitin {Human (Homo sapiens) [TaxId: 9606]} | 87.51 | |
| d2zeqa1 | 78 | Ubiquitin-like domain of parkin {Mouse (Mus muscul | 86.8 | |
| d1we6a_ | 111 | Splicing factor 3 subunit 1, C-terminal domain {Th | 84.29 | |
| d1uh6a_ | 100 | Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculu | 83.51 |
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=4e-14 Score=128.78 Aligned_cols=240 Identities=15% Similarity=0.070 Sum_probs=148.4
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999992995899998874321112215999611799999999999982998999999999999999950999923
Q 000230 868 LLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPD 947 (1822)
Q Consensus 868 L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~dhp~ 947 (1822)
.++.|..++..|++++|+.+|++++.. +|..+.++..+|.+|..+|++++|+.++.+++.+ .|.
T Consensus 22 ~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~ 85 (323)
T d1fcha_ 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQ--------DPKHMEAWQYLGTTQAENEQELLAISALRRCLEL--------KPD 85 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC--------CCC
T ss_conf 999999999859999999999999986--------8998999999999999837758899999851002--------222
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC-CHHHHH------HHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 499999999999991997999999999999999834999-966999------9999999999979979999999999999
Q 000230 948 TMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPS-HPNTAA------TYINVAMMEEGLGNVHVALRYLHEALKC 1020 (1822)
Q Consensus 948 ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~d-hp~~a~------al~nLA~il~~lG~yeeAl~~lekAL~i 1020 (1822)
....+.++|.+|..+|++++|+.++.+++.+........ ...... ........+...+.+.+|+..+.+++.+
T Consensus 86 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~ 165 (323)
T d1fcha_ 86 NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRL 165 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22222222222222221121110002677736106788876640000000100001478888765799999999999997
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH------HHHHH-HH
Q ss_conf 999618895889999999999999905989999999999999999719898999999999999999------99999-99
Q 000230 1021 NQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFES------KALEQ-QE 1093 (1822)
Q Consensus 1021 ~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l~q------qAl~~-qe 1093 (1822)
. +++. .+.++..+|.++..+|++++|+.++++++.+ .+++..... .++.++. +|... .+
T Consensus 166 ~-----p~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~---~lg~~~~~~g~~~~A~~~~~~ 231 (323)
T d1fcha_ 166 D-----PTSI-DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV-----RPNDYLLWN---KLGATLANGNQSEEAVAAYRR 231 (323)
T ss_dssp S-----TTSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHH---HHHHHHHHTTCHHHHHHHHHH
T ss_pred H-----HCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC-----CCCCCCCHH---HHHHCCCCCCCCHHHHHHHHH
T ss_conf 1-----3012-2211103688888888775500211122222-----222211101---333012211110137888778
Q ss_pred HHHCCCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9984999983011101634088899-9991999899999999999999726899
Q 000230 1094 AARNGTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKGKPGQ 1146 (1822)
Q Consensus 1094 A~~~g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~~lG~ 1146 (1822)
++...+.++. ++..++ .|...|++++|+.+|++|+++.....+.
T Consensus 232 al~~~p~~~~---------a~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 276 (323)
T d1fcha_ 232 ALELQPGYIR---------SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGP 276 (323)
T ss_dssp HHHHCTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHCCHH---------HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 9988432499---------99999999998789999999999999709757001
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sgoa_ d.82.3.1 (A:) Hypothetical protein c14orf129, hspc210 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
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| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
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| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
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| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wiaa_ d.15.1.1 (A:) Ubiquitin-like protein bab25500 (2010008E23Rik) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v2ya_ d.15.1.1 (A:) Ubiquitin-like protein 3300001g02rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B (Hhr23B) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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