Citrus Sinensis ID: 000278
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1731 | 2.2.26 [Sep-21-2011] | |||||||
| P34756 | 2278 | 1-phosphatidylinositol 3- | yes | no | 0.217 | 0.165 | 0.4 | 4e-81 | |
| B0G126 | 2656 | 1-phosphatidylinositol 3- | yes | no | 0.150 | 0.097 | 0.526 | 6e-72 | |
| Q9Y2I7 | 2098 | 1-phosphatidylinositol 3- | yes | no | 0.161 | 0.133 | 0.442 | 2e-68 | |
| Q9Z1T6 | 2097 | 1-phosphatidylinositol 3- | yes | no | 0.161 | 0.133 | 0.439 | 8e-68 | |
| O59722 | 1932 | 1-phosphatidylinositol 3- | yes | no | 0.193 | 0.173 | 0.374 | 2e-67 | |
| O96838 | 1809 | Putative 1-phosphatidylin | yes | no | 0.145 | 0.139 | 0.445 | 8e-57 | |
| P54408 | 559 | T-complex protein 1 subun | N/A | no | 0.173 | 0.538 | 0.282 | 1e-24 | |
| Q9LKI7 | 558 | T-complex protein 1 subun | N/A | no | 0.140 | 0.437 | 0.290 | 2e-21 | |
| O74341 | 528 | T-complex protein 1 subun | no | no | 0.147 | 0.482 | 0.281 | 9e-21 | |
| P39077 | 534 | T-complex protein 1 subun | no | no | 0.138 | 0.447 | 0.274 | 1e-20 |
| >sp|P34756|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3 | Back alignment and function desciption |
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Score = 304 bits (778), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 253/425 (59%), Gaps = 48/425 (11%)
Query: 1325 DTVVPVYDDEPTSIIAYALVSTEYHVGLM-----------VDDGEKTKEGGDVMS----- 1368
D+ V + +DEP+S+IA+ L +++Y +M + K GG+
Sbjct: 1858 DSDVIIREDEPSSLIAFCLSTSDYRNKMMNLNVQQQQQQQTAEAAPAKTGGNSGGTTQTG 1917
Query: 1369 --SFSLSDSVNLQSHLSADELTLDLYRSLGSTDESILS---LSGSR----------SSLI 1413
S ++S SV+ SH + + SL +T E +L+ + G+R S
Sbjct: 1918 DPSVNISPSVSTTSHNKGRDSEIS---SLVTTKEGLLNTPPIEGARDRTPQESQTHSQAN 1974
Query: 1414 LDPL-------SYTKAFHPKVSFKDDGPLGQVKYSVTCYYARRFEALRKICCPSELDYVR 1466
LD L + A H + F++ G S ++ F+ RKIC E ++++
Sbjct: 1975 LDTLQELEKIMTKKTATHLRYQFEE----GLTVMSCKIFFTEHFDVFRKICDCQE-NFIQ 2029
Query: 1467 SLSRCKKWGAKGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYFKYLSESISTGSP 1526
SLSRC KW + GGKS F KTLDDRFIIK+++ ELE+FIKFAP YF+Y+++++ P
Sbjct: 2030 SLSRCVKWDSNGGKSGSGFLKTLDDRFIIKELSHAELEAFIKFAPSYFEYMAQAMFHDLP 2089
Query: 1527 TCLAKILGIYQV-TTKHLKGGRESKMDVLVMENLLFSRSVTQLYDLKGSSRSRYNPDSSG 1585
T LAK+ G YQ+ + + KMDV++MENL + + T+++DLKGS R+R+ +
Sbjct: 2090 TTLAKVFGFYQIQVKSSISSSKSYKMDVIIMENLFYEKKTTRIFDLKGSMRNRHVEQTGK 2149
Query: 1586 SNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEENHQ 1645
+N+VLLD+N++E + SPI V K+LL +VWNDT FLA ++VMDYSL++G+D E +
Sbjct: 2150 ANEVLLDENMVEYIYESPIHVREYDKKLLRASVWNDTLFLAKMNVMDYSLVIGIDNEGYT 2209
Query: 1646 LVLGIIDFMRQYTWDKHLETWVKASGILGGPKN-ASPTVISPKQYKKRFRKAMTTYFLMV 1704
L +GIIDF+R +TWDK LE+WVK G++GG PTV++P+QYKKRFR+AM Y LMV
Sbjct: 2210 LTVGIIDFIRTFTWDKKLESWVKEKGLVGGASVIKQPTVVTPRQYKKRFREAMERYILMV 2269
Query: 1705 PDQWF 1709
PD W+
Sbjct: 2270 PDPWY 2274
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The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. The product of the reaction it catalyzes functions as an important regulator of vacuole homeostasis perhaps by controlling membrane flux to and/or from the vacuole. Hyperosmotic shock-induced increase in the levels of PtdIns(3,5)P2 requires the presence of VAC7, VAC14, and/or FIG4. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0 |
| >sp|B0G126|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9Z1T6|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3 | Back alignment and function description |
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| >sp|O59722|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2 | Back alignment and function description |
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| >sp|O96838|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1 | Back alignment and function description |
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| >sp|O74341|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1 | Back alignment and function description |
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| >sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1731 | ||||||
| 359482442 | 1848 | PREDICTED: uncharacterized protein LOC10 | 0.927 | 0.869 | 0.715 | 0.0 | |
| 255584440 | 1838 | fyve finger-containing phosphoinositide | 0.923 | 0.869 | 0.711 | 0.0 | |
| 224119558 | 1763 | predicted protein [Populus trichocarpa] | 0.898 | 0.882 | 0.696 | 0.0 | |
| 147793048 | 1893 | hypothetical protein VITISV_043718 [Viti | 0.927 | 0.847 | 0.663 | 0.0 | |
| 356522446 | 1825 | PREDICTED: 1-phosphatidylinositol-3-phos | 0.903 | 0.856 | 0.670 | 0.0 | |
| 356559220 | 1815 | PREDICTED: 1-phosphatidylinositol-3-phos | 0.907 | 0.865 | 0.662 | 0.0 | |
| 297742933 | 1652 | unnamed protein product [Vitis vinifera] | 0.824 | 0.863 | 0.658 | 0.0 | |
| 357514311 | 1811 | 1-phosphatidylinositol-3-phosphate 5-kin | 0.927 | 0.886 | 0.642 | 0.0 | |
| 225444589 | 1865 | PREDICTED: uncharacterized protein LOC10 | 0.925 | 0.858 | 0.639 | 0.0 | |
| 297829984 | 1789 | phosphatidylinositol-4-phosphate 5-kinas | 0.904 | 0.874 | 0.634 | 0.0 |
| >gi|359482442|ref|XP_002271263.2| PREDICTED: uncharacterized protein LOC100254952 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 2273 bits (5891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1174/1641 (71%), Positives = 1347/1641 (82%), Gaps = 35/1641 (2%)
Query: 114 EEEYGVYRSDSETRHF------YGPLEFDDMSNDDGSHRIHLDQDNTATKCLSTSPLLSS 167
++EYGVYR DS T HF Y ++FD++ ND GSH++H D +++ TK LS+SPL S
Sbjct: 217 DDEYGVYRLDSGTSHFPQANDFYSQVDFDEIDNDYGSHKVHPDGEDSNTKSLSSSPLHHS 276
Query: 168 FEAQGLEGISQHGKK-DEQEIGDECEASCSLYAAENVSAGPVDFENDGLLWLPPEPEDEE 226
++QGLEG + GKK DE +IGDECEA S YAAE+V + PVDFEN+GLLWLPPEPEDEE
Sbjct: 277 CDSQGLEGNQEVGKKEDEHDIGDECEAPSSFYAAEDVDSEPVDFENNGLLWLPPEPEDEE 336
Query: 227 DERE---AGLFDDDDDDDAGDATGEWGYLRTSSSFGSGETRNKDKSSEEHKKAMKNVVDG 283
DERE A LFDDDD GDATGEWGYL+ SSSFGSGE RN+D+S+EEHKKAMKNVVDG
Sbjct: 337 DERELREALLFDDDD---DGDATGEWGYLQPSSSFGSGEYRNRDRSTEEHKKAMKNVVDG 393
Query: 284 HFRALVAQLLQVENLSIGDEDDEESWLEIITSLSWEAATLLKPDMSKGGGMDPGGYVKVK 343
HFRALVAQLLQVENL +G+EDD ESWLEIITSLSWEAATLLKPDMSK GMDPGGYVKVK
Sbjct: 394 HFRALVAQLLQVENLPVGEEDDGESWLEIITSLSWEAATLLKPDMSKSAGMDPGGYVKVK 453
Query: 344 CIASGRRCESMVVKGVVCKKNVAHRRMASKMEKPRLLILGGALEYQRVSNLLSSFDTLLQ 403
C+ASGRRCESMV+KGVVCKKN+AHRRM SK+EKPRLLILGGALEYQRVSNLLSSFDTLLQ
Sbjct: 454 CLASGRRCESMVIKGVVCKKNIAHRRMTSKIEKPRLLILGGALEYQRVSNLLSSFDTLLQ 513
Query: 404 QEMDHLKMAVAKIEAHHPDVLLVEKSVSRFAQEYLLAKNVSLVLNTRRPLLERISRCTGA 463
QEMDHLKMAVAKI+AHHPDVLLVEKSVSRFAQ+YLLAK++SLVLN +RPLLERI+RCTGA
Sbjct: 514 QEMDHLKMAVAKIDAHHPDVLLVEKSVSRFAQDYLLAKDISLVLNIKRPLLERIARCTGA 573
Query: 464 QIVPSIDHISSPKLGYCEKFHVERFLEDLGSAGQGGKKLVKTLMFFEGCPKPLGCTILLR 523
QIVPSIDH+SS KLGYC+ FHVE+F E+ G+A QGGK LVKTLM+FEGCPKPLGCTILLR
Sbjct: 574 QIVPSIDHLSSQKLGYCDMFHVEKFEEEHGTARQGGKNLVKTLMYFEGCPKPLGCTILLR 633
Query: 524 GADGDELKKVKHVVQYGIFAAYHLAVETSFLADEGASLPELPMPAP-SIVVPDKSSSIER 582
GA+ DELKKVKHV+QYGIFAAYHLA+ETSFLADEGASLPELP+ +P ++ +PDK SSI+R
Sbjct: 634 GANRDELKKVKHVIQYGIFAAYHLALETSFLADEGASLPELPLNSPINVALPDKPSSIDR 693
Query: 583 SISTVPGFSVPASENSPGPQPGPEHKRSHSVPISDLASSTGIGSIVKMEKSLLPSLSNGD 642
SIS VPGF+ SE QP + ++S+SVP L ++T ++ME + PSL NG
Sbjct: 694 SISMVPGFTALPSERQQESQPSDDAQKSNSVP--PLMNAT----FLQMEMASSPSLPNGP 747
Query: 643 SLQSTEPTSSLTNSTASFSPVPSSRKVISDSFHTGPLSHHE-DKNETASKETLVKDASAA 701
SLQ T+P SS NST FS +PSS++ +SDS+H+ L +H +N+ S E+L A
Sbjct: 748 SLQYTQPISSSINSTG-FSFIPSSKQEVSDSYHSNILPYHAFVENKMDSSESLEVRDFAT 806
Query: 702 NNGQAAKNDHHGVDGLGPLDALDQGIVVNNSQNNSGFVIANQTGDSEVSSTQQDSNNYPE 761
N G+A +H G G L+ + +G V NN QN + NQ G SE+ S QQD N+
Sbjct: 807 NAGEAFMYNHLSFRGYGSLETMGEGGVANNGQNYYDATVTNQLGTSEMISLQQDIKNHHG 866
Query: 762 EPKLLKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHL 821
EP KEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYG+FDKPLGRFLRDHL
Sbjct: 867 EPGSSKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGNFDKPLGRFLRDHL 926
Query: 822 FDQNYRCRSCDMPSEAHVHCYTHRQGTLTISVKKLPEILLPGEREGKIWMWHRCLQCPRI 881
FDQ++RCRSC+MPSEAHVHCYTHRQGTLTISVKKLPE LLPGEREGKIWMWHRCL+CPR
Sbjct: 927 FDQSFRCRSCEMPSEAHVHCYTHRQGTLTISVKKLPEFLLPGEREGKIWMWHRCLRCPRN 986
Query: 882 NGFPPATRRVIMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVA 941
NGFPPATRR++MSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVA
Sbjct: 987 NGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVA 1046
Query: 942 CFRYASIDVHSVYLPPHKLDFINEYQEWIQKEADEVVSQAELLFSEVLNNLSPILDKKVG 1001
CFRYASIDVHSVYLPP KL+F E QEWIQKE +EVV +AELLFSEV N L I +K G
Sbjct: 1047 CFRYASIDVHSVYLPPAKLEFNYENQEWIQKETNEVVDRAELLFSEVCNALHRISEKGHG 1106
Query: 1002 ----PELRHQIVELEGMLQREKAEFEESVQKALSREASKGQPVIDILEINRLRRQLLFQS 1057
E RHQI ELEGMLQ+EKAEFEES+QKA+SREA KGQP++DILEINRLRRQLLFQS
Sbjct: 1107 MGLITESRHQIAELEGMLQKEKAEFEESLQKAVSREAKKGQPLVDILEINRLRRQLLFQS 1166
Query: 1058 YMWDHRLVYAANLDIDS--NGLKSEISEQGEKIPTSGEKVVQMNVLAMPETGSSFYDSLL 1115
Y+WDHRL+YAA+LD +S + + ISE EK + +K++ +N P G S DSLL
Sbjct: 1167 YVWDHRLIYAASLDKNSIVDNVSVSISEHEEKPQATSDKLIDINRPIKPGKGFSSCDSLL 1226
Query: 1116 ADAKLDKSSDREEGGDSSTTLSDGFLQETIMGQDSNLLENDQGNISASISFCEQSGSLES 1175
DAKL+K ++ EG S ++ D Q T M QDSN E DQGN+ AS + C+Q LES
Sbjct: 1227 VDAKLNKGPNQGEGISSQSSQHDTVYQGTDMVQDSNHKEEDQGNLPASSNVCDQPDPLES 1286
Query: 1176 EVNVRRTLSEGQVPVVANLSDTLEAAWTGENYQ-----VNNTYGLSDSPLVDSSTVAVMT 1230
V VRR LS+GQ P+ +LS TL+A WTGEN+ +NT L D L DSST V+
Sbjct: 1287 GVVVRRALSDGQFPIAEDLSHTLDAKWTGENHPGTGAPKDNTCALPDLALADSSTALVVP 1346
Query: 1231 EGLDLEDHMEVQTGAKVTQSLSPALSSKGPDNMEEPVAWFRMPFLNFYHSLNKNFLSSSQ 1290
E L+LEDH E +TG KVT S S L +KG D +E+ +W M FLNFY + NKNFL S+Q
Sbjct: 1347 EKLELEDHTEERTGLKVTLSFSSLLPAKGQDTIEDSASWSGMSFLNFYRAFNKNFLGSAQ 1406
Query: 1291 KLDTMSGYNPIYFSSFRDSELKGGARLFLPVGVNDTVVPVYDDEPTSIIAYALVSTEYHV 1350
KLDT+ YNP+Y SSFR+ EL+GGARL LPVGVNDTV+PVYDDEPTSII YALVS +YH
Sbjct: 1407 KLDTLGEYNPVYVSSFRELELQGGARLLLPVGVNDTVIPVYDDEPTSIICYALVSPQYHA 1466
Query: 1351 GLMVDDGEKTKEGGDVMSSFSLSDSVNLQSHLSADELTLDLYRSLGSTDESILSLSGSRS 1410
L+ D+ E+ K+GG+ MSS SLS+SVNLQS LS DE + +++ S D+S LS+SGSRS
Sbjct: 1467 QLL-DEWERPKDGGEPMSSSSLSESVNLQSFLSFDETVSESFKNFSSIDDSFLSMSGSRS 1525
Query: 1411 SLILDPLSYTKAFHPKVSFKDDGPLGQVKYSVTCYYARRFEALRKICCPSELDYVRSLSR 1470
SL+ DP SYTKA H +V F DD PLG+VKY+VTCYYA+RFEALR+ICCPSELD++RSL R
Sbjct: 1526 SLVPDPFSYTKALHARVFFSDDSPLGKVKYTVTCYYAKRFEALRRICCPSELDFLRSLCR 1585
Query: 1471 CKKWGAKGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYFKYLSESISTGSPTCLA 1530
CKKWGA+GGKSNVFFAK+LDDRFIIKQVTKTELESFIKFAP YFKYLSESISTGSPTCLA
Sbjct: 1586 CKKWGAQGGKSNVFFAKSLDDRFIIKQVTKTELESFIKFAPAYFKYLSESISTGSPTCLA 1645
Query: 1531 KILGIYQVTTKHLKGGRESKMDVLVMENLLFSRSVTQLYDLKGSSRSRYNPDSSGSNKVL 1590
KILGIYQVT+KHLKGG+ES+MD+LVMENLLF R+VT+LYDLKGSSRSRYN DSSG+NKVL
Sbjct: 1646 KILGIYQVTSKHLKGGKESRMDLLVMENLLFERTVTRLYDLKGSSRSRYNADSSGNNKVL 1705
Query: 1591 LDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEENHQLVLGI 1650
LDQNLIEAMPTSPIFVGNKAKR+LERAVWNDT+FLAS+DVMDYSLLVGVDEE H+LVLGI
Sbjct: 1706 LDQNLIEAMPTSPIFVGNKAKRVLERAVWNDTSFLASVDVMDYSLLVGVDEEKHELVLGI 1765
Query: 1651 IDFMRQYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWFP 1710
IDFMRQYTWDKHLETWVKASGILGGPKN+SPTVISPKQYKKRFRKAMTTYFLMVPDQW P
Sbjct: 1766 IDFMRQYTWDKHLETWVKASGILGGPKNSSPTVISPKQYKKRFRKAMTTYFLMVPDQWSP 1825
Query: 1711 LSTVPSKLQAEFC-EDTQMGT 1730
+ +PSK Q+E C E+TQ GT
Sbjct: 1826 ATLIPSKSQSELCEENTQGGT 1846
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584440|ref|XP_002532951.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] gi|223527280|gb|EEF29435.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224119558|ref|XP_002331190.1| predicted protein [Populus trichocarpa] gi|222873311|gb|EEF10442.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147793048|emb|CAN62134.1| hypothetical protein VITISV_043718 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356522446|ref|XP_003529857.1| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356559220|ref|XP_003547898.1| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297742933|emb|CBI35800.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357514311|ref|XP_003627444.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Medicago truncatula] gi|355521466|gb|AET01920.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|225444589|ref|XP_002277309.1| PREDICTED: uncharacterized protein LOC100267980 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297829984|ref|XP_002882874.1| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328714|gb|EFH59133.1| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1731 | ||||||
| TAIR|locus:2091050 | 1791 | FAB1B "FORMS APLOID AND BINUCL | 0.406 | 0.392 | 0.562 | 0.0 | |
| TAIR|locus:2125884 | 1757 | FAB1A "FORMS APLOID AND BINUCL | 0.354 | 0.348 | 0.538 | 0.0 | |
| TAIR|locus:2013965 | 1648 | FAB1C "FORMS APLOID AND BINUCL | 0.302 | 0.317 | 0.507 | 0.0 | |
| TAIR|locus:2026109 | 1456 | FAB1D "FORMS APLOID AND BINUCL | 0.161 | 0.192 | 0.605 | 1.4e-200 | |
| ZFIN|ZDB-GENE-030131-9636 | 2100 | pikfyve "phosphoinositide kina | 0.213 | 0.176 | 0.405 | 9.1e-149 | |
| MGI|MGI:1335106 | 2097 | Pikfyve "phosphoinositide kina | 0.161 | 0.133 | 0.439 | 1.7e-147 | |
| RGD|1592067 | 2097 | Pikfyve "phosphoinositide kina | 0.161 | 0.133 | 0.442 | 1.4e-146 | |
| UNIPROTKB|F1SST9 | 2105 | PIKFYVE "Uncharacterized prote | 0.161 | 0.133 | 0.442 | 2e-145 | |
| UNIPROTKB|Q9Y2I7 | 2098 | PIKFYVE "1-phosphatidylinosito | 0.161 | 0.133 | 0.442 | 4e-145 | |
| UNIPROTKB|F1NNU6 | 2101 | PIKFYVE "Uncharacterized prote | 0.161 | 0.133 | 0.441 | 6.4e-145 |
| TAIR|locus:2091050 FAB1B "FORMS APLOID AND BINUCLEATE CELLS 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1906 (676.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 414/736 (56%), Positives = 515/736 (69%)
Query: 1007 QIVELEGMLQREKAEFEESVQKALSREASKGQPVIDILEINRLRRQL-LFQSYMWDHRLV 1065
QI E +G +R E EE +QK + Q ++ E+N + + + + Y +L+
Sbjct: 1074 QIAE-KGF-RRRIGELEEVLQKEKAEFEENMQKILH-REVNEGQPLVDILELYRIHRQLL 1130
Query: 1066 YAANL-D---IDSNGL-KSEISEQGEKIPTSGEKVVQMNVLAMPETGSSFYDSLLADAKL 1120
+ + + D I+++ L K E S+ ++ EK +PE + +SLL +++
Sbjct: 1131 FQSYMWDHRLINASTLHKLENSDDTKR--EENEKPPLAKSQTLPEMNAGT-NSLLTGSEV 1187
Query: 1121 DKSSDREEGGDSSTTLSDGFLQETIMGQDSNLLENDQGNISASISFCEQSGSLESEVNVR 1180
+ + D + GD+ + + +E D ++D G +S S + + S LE++V+VR
Sbjct: 1188 NLNPDGDSTGDTGSL--NNVQKEADTNSDLYQEKDDGGEVSPSKTLPDTSYPLENKVDVR 1245
Query: 1181 RTLSEGQVPVVANLSDTLEAAWTGENYQ-----VNNTYGLSDSPLVDSSTVAVMTEGLDL 1235
RT S+GQ+ V+ NLS TL+AAW GE NN L S + +SST ++EGL
Sbjct: 1246 RTQSDGQI-VMKNLSATLDAAWIGERQTSVEIPTNNKVSLPPSTMSNSSTFPPISEGLMP 1304
Query: 1236 EDHMEVQTGAKVTQSLSPALSSKGPDNMEEPVAWFRMPFLNFYHSLNKNFLSSSQKLDTM 1295
D E Q KV +SPAL SK +N E+ V+W +PFLNFY S+NKNFL SSQKLDT
Sbjct: 1305 IDLPEQQNEFKVAYPVSPALPSKNYENSEDSVSWLSVPFLNFYRSINKNFLLSSQKLDTF 1364
Query: 1296 SGYNPIYFSSFRDSELKGGARLFLPVGVNDTVVPVYDDEPTSIIAYALVSTEYHVGLMVD 1355
++PIY SSFR++EL+GG RL LPVG+ND VVPVYDDEPTS+IAYAL+S EY
Sbjct: 1365 GEHSPIYISSFREAELQGGPRLLLPVGLNDIVVPVYDDEPTSMIAYALMSPEYQ------ 1418
Query: 1356 DGEKTKEGGDVMSSFSLSDSVNLQSHLSADELTLDLYRSLGSTDEXXXXXXXXXXXXXXD 1415
+T G+ + S+ +N+ + D+ D RS GS DE D
Sbjct: 1419 --RQTSAEGESLVSYP--SELNIPRPV--DDTIFDPSRSNGSVDESILSISSSRSTSLLD 1472
Query: 1416 PLSYTKAFHPKVSFKDDGPLGQVKYSVTCYYARRFEALRKICCPSELDYVRSLSRCKKWG 1475
PLSYTKA H +VS+ +DG LG+VKY+VTCYYA+RFEALR IC PSEL+Y+RSLSRCKKWG
Sbjct: 1473 PLSYTKALHARVSYGEDGTLGKVKYTVTCYYAKRFEALRGICLPSELEYIRSLSRCKKWG 1532
Query: 1476 AKGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYFKYLSESISTGSPTCLAKILGI 1535
A+GGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAP YFKYLSESIST SPTCLAKILGI
Sbjct: 1533 AQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSESISTKSPTCLAKILGI 1592
Query: 1536 YQVTTKHLKGGRESKMDVLVMENLLFSRSVTQLYDLKGSSRSRYNPDSSGSNKVLLDQNL 1595
YQV TK LK G+E+KMDVL+MENLLF R+V +LYDLKGSSR+RYNPDSSGSNKVLLDQNL
Sbjct: 1593 YQVATKQLKSGKETKMDVLIMENLLFGRTVKRLYDLKGSSRARYNPDSSGSNKVLLDQNL 1652
Query: 1596 IEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEENHQLVLGIIDFMR 1655
IEAMPTSPIFVGNKAKRLLERAVWNDTAFLA DVMDYSLLVGVDEE ++LVLGIIDF+R
Sbjct: 1653 IEAMPTSPIFVGNKAKRLLERAVWNDTAFLALGDVMDYSLLVGVDEEKNELVLGIIDFLR 1712
Query: 1656 QYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWFPLSTVP 1715
QYTWDKHLE+WVK +GILGGPKN +PTVISPKQYK+RFRKAMTTYFLMVPDQW P + V
Sbjct: 1713 QYTWDKHLESWVKFTGILGGPKNEAPTVISPKQYKRRFRKAMTTYFLMVPDQWSPPNVVA 1772
Query: 1716 SKLQAEFCEDT-QMGT 1730
+ +++ E+T Q GT
Sbjct: 1773 NNSKSDQPEETSQAGT 1788
|
|
| TAIR|locus:2125884 FAB1A "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2013965 FAB1C "FORMS APLOID AND BINUCLEATE CELLS 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2026109 FAB1D "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1592067 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NNU6 PIKFYVE "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_1580023 | hypothetical protein (1763 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1731 | |||
| cd03334 | 261 | cd03334, Fab1_TCP, TCP-1 like domain of the eukary | 1e-134 | |
| cd00139 | 313 | cd00139, PIPKc, Phosphatidylinositol phosphate kin | 1e-110 | |
| pfam01504 | 255 | pfam01504, PIP5K, Phosphatidylinositol-4-phosphate | 4e-79 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 9e-69 | |
| COG5253 | 612 | COG5253, MSS4, Phosphatidylinositol-4-phosphate 5- | 7e-58 | |
| cd03333 | 209 | cd03333, chaperonin_like, chaperonin_like superfam | 1e-57 | |
| TIGR02344 | 525 | TIGR02344, chap_CCT_gamma, T-complex protein 1, ga | 9e-33 | |
| pfam00118 | 481 | pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami | 2e-30 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 3e-25 | |
| cd00309 | 464 | cd00309, chaperonin_type_I_II, chaperonin families | 4e-24 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 1e-22 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 1e-21 | |
| cd03337 | 480 | cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type | 2e-21 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 2e-18 | |
| cd03343 | 517 | cd03343, cpn60, cpn60 chaperonin family | 1e-17 | |
| TIGR02339 | 519 | TIGR02339, thermosome_arch, thermosome, various su | 2e-16 | |
| COG0459 | 524 | COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po | 4e-11 | |
| PTZ00212 | 533 | PTZ00212, PTZ00212, T-complex protein 1 subunit be | 3e-10 | |
| cd03338 | 515 | cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type | 9e-10 | |
| TIGR02340 | 536 | TIGR02340, chap_CCT_alpha, T-complex protein 1, al | 2e-09 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 2e-09 | |
| cd03335 | 527 | cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type | 6e-09 | |
| cd03336 | 517 | cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type | 2e-08 | |
| TIGR02342 | 517 | TIGR02342, chap_CCT_delta, T-complex protein 1, de | 2e-08 | |
| TIGR02345 | 523 | TIGR02345, chap_CCT_eta, T-complex protein 1, eta | 4e-08 | |
| cd03342 | 484 | cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type | 1e-07 | |
| cd03339 | 526 | cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty | 3e-07 | |
| cd03340 | 522 | cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I | 1e-06 | |
| TIGR02347 | 531 | TIGR02347, chap_CCT_zeta, T-complex protein 1, zet | 4e-06 | |
| TIGR02341 | 518 | TIGR02341, chap_CCT_beta, T-complex protein 1, bet | 2e-05 | |
| TIGR02343 | 532 | TIGR02343, chap_CCT_epsi, T-complex protein 1, eps | 2e-05 | |
| TIGR02346 | 531 | TIGR02346, chap_CCT_theta, T-complex protein 1, th | 0.001 |
| >gnl|CDD|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
Score = 417 bits (1074), Expect = e-134
Identities = 153/274 (55%), Positives = 195/274 (71%), Gaps = 14/274 (5%)
Query: 286 RALVAQLLQVENLSIGDEDDEESWLEIITSLSWEAATLLKPDMSKGGGMDPGGYVKVKCI 345
RAL+AQLL+ E +S ++ESWL+I+ L W+AA+ +KPD+ G MD YVK+K I
Sbjct: 1 RALLAQLLKDEGIS-----NDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKI 55
Query: 346 ASGRRCESMVVKGVVCKKNVAHRRMASKMEKPRLLILGGALEYQRVSNLLSSFDTLLQQE 405
G +S VV GVV KNVAH+RM SK++ PR+L+L G LEYQRV N L S D ++ QE
Sbjct: 56 PGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQE 115
Query: 406 MDHLKMAVAKIEAHHPDVLLVEKSVSRFAQEYLLAKNVSLVLNTRRPLLERISRCTGAQI 465
++LK V++I A PDV+LVEKSVSR AQ+ LL ++LVLN + +LERISRCTGA I
Sbjct: 116 KEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADI 175
Query: 466 VPSIDH-ISSPKLGYCEKFHVERFLEDLGSAGQGGKKLVKTLMFFEGCPKPLGCTILLRG 524
+ S+D ++SPKLG CE F V ++E+ G KTLMFFEGCPK LGCTILLRG
Sbjct: 176 ISSMDDLLTSPKLGTCESFRVRTYVEEHGR--------SKTLMFFEGCPKELGCTILLRG 227
Query: 525 ADGDELKKVKHVVQYGIFAAYHLAVETSFLADEG 558
D +ELKKVK VV++ +FAAYHL +ETSFLADE
Sbjct: 228 GDLEELKKVKRVVEFMVFAAYHLKLETSFLADEF 261
|
Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261 |
| >gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|185514 PTZ00212, PTZ00212, T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239452 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233827 TIGR02347, chap_CCT_zeta, T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|211733 TIGR02341, chap_CCT_beta, T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233826 TIGR02346, chap_CCT_theta, T-complex protein 1, theta subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1731 | |||
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| COG5253 | 612 | MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si | 100.0 | |
| cd00139 | 313 | PIPKc Phosphatidylinositol phosphate kinases (PIPK | 100.0 | |
| smart00330 | 342 | PIPKc Phosphatidylinositol phosphate kinases. | 100.0 | |
| KOG0229 | 420 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 100.0 | |
| PF01504 | 252 | PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; | 100.0 | |
| TIGR02344 | 525 | chap_CCT_gamma T-complex protein 1, gamma subunit. | 100.0 | |
| TIGR02339 | 519 | thermosome_arch thermosome, various subunits, arch | 100.0 | |
| KOG0364 | 527 | consensus Chaperonin complex component, TCP-1 gamm | 100.0 | |
| cd03343 | 517 | cpn60 cpn60 chaperonin family. Chaperonins are inv | 100.0 | |
| cd03339 | 526 | TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha | 100.0 | |
| cd03335 | 527 | TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02343 | 532 | chap_CCT_epsi T-complex protein 1, epsilon subunit | 100.0 | |
| TIGR02347 | 531 | chap_CCT_zeta T-complex protein 1, zeta subunit. M | 100.0 | |
| PTZ00212 | 533 | T-complex protein 1 subunit beta; Provisional | 100.0 | |
| cd03340 | 522 | TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero | 100.0 | |
| cd03338 | 515 | TCP1_delta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| cd03336 | 517 | TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| cd03334 | 261 | Fab1_TCP TCP-1 like domain of the eukaryotic phosp | 100.0 | |
| TIGR02342 | 517 | chap_CCT_delta T-complex protein 1, delta subunit. | 100.0 | |
| TIGR02340 | 536 | chap_CCT_alpha T-complex protein 1, alpha subunit. | 100.0 | |
| TIGR02345 | 522 | chap_CCT_eta T-complex protein 1, eta subunit. Mem | 100.0 | |
| KOG0361 | 543 | consensus Chaperonin complex component, TCP-1 eta | 100.0 | |
| cd03337 | 480 | TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02341 | 519 | chap_CCT_beta T-complex protein 1, beta subunit. M | 100.0 | |
| cd03342 | 484 | TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| TIGR02346 | 531 | chap_CCT_theta T-complex protein 1, theta subunit. | 100.0 | |
| cd00309 | 464 | chaperonin_type_I_II chaperonin families, type I a | 100.0 | |
| cd03341 | 472 | TCP1_theta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| COG0459 | 524 | GroL Chaperonin GroEL (HSP60 family) [Posttranslat | 100.0 | |
| PF00118 | 485 | Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon | 100.0 | |
| KOG0363 | 527 | consensus Chaperonin complex component, TCP-1 beta | 100.0 | |
| KOG0358 | 534 | consensus Chaperonin complex component, TCP-1 delt | 100.0 | |
| KOG0359 | 520 | consensus Chaperonin complex component, TCP-1 zeta | 100.0 | |
| KOG0360 | 545 | consensus Chaperonin complex component, TCP-1 alph | 100.0 | |
| PRK00013 | 542 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PTZ00114 | 555 | Heat shock protein 60; Provisional | 100.0 | |
| PRK12849 | 542 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PRK12851 | 541 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| cd03344 | 520 | GroEL GroEL_like type I chaperonin. Chaperonins ar | 100.0 | |
| KOG0362 | 537 | consensus Chaperonin complex component, TCP-1 thet | 100.0 | |
| TIGR02348 | 524 | GroEL chaperonin GroL. This family consists of Gro | 100.0 | |
| PRK12852 | 545 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PRK12850 | 544 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PLN03167 | 600 | Chaperonin-60 beta subunit; Provisional | 100.0 | |
| PRK14104 | 546 | chaperonin GroEL; Provisional | 100.0 | |
| CHL00093 | 529 | groEL chaperonin GroEL | 100.0 | |
| cd03333 | 209 | chaperonin_like chaperonin_like superfamily. Chape | 100.0 | |
| KOG0357 | 400 | consensus Chaperonin complex component, TCP-1 epsi | 99.94 | |
| KOG0356 | 550 | consensus Mitochondrial chaperonin, Cpn60/Hsp60p [ | 99.87 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.55 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 99.45 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 99.36 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.36 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 99.31 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 99.19 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 99.0 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 98.93 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 98.72 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 98.55 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 98.11 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 97.78 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 97.38 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 97.16 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 93.67 | |
| KOG0993 | 542 | consensus Rab5 GTPase effector Rabaptin-5 [Intrace | 86.68 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 86.01 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 85.72 |
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-241 Score=2250.79 Aligned_cols=1491 Identities=52% Similarity=0.805 Sum_probs=1064.3
Q ss_pred ccCCCccccccccccCCCCcccccccccCceEeCCCCCCcccCCCCCCcccccCCcccccchhhHHHHhccccccCCCCc
Q 000278 34 MPDQSCRVCYECDSQFTVFNRRHHCRLCGRVFCGQCTSNSIPAPSVDPKTAQEQWEKLRVCNYCFKQWQLGVATLHNGTL 113 (1731)
Q Consensus 34 ~pd~~~~~C~~C~~~Fsl~~RrHHCR~CG~ifC~~Cs~~~v~l~~~~~~~~~~~~~~vRVC~~C~~~l~~~~~~~~~~~~ 113 (1731)
+||.....|+.|...|+.|+|+||| ||+|||..|-.. .... ..++. +.|..........-.
T Consensus 92 m~d~s~~ec~~~~~~~~t~Rr~~~~--~gqi~~ss~~~~-~~~~--------~~~e~----d~c~~~~~~~~~sss---- 152 (1598)
T KOG0230|consen 92 MPDSSSKECYDCEQKFETFRRKHHC--CGQIFCSSCIDG-MSIR--------CDGEL----DYCSRYVEDFAKSSS---- 152 (1598)
T ss_pred CCccccchhhhhccchhhhhccccc--CccccCCcccCC-cccc--------ccccc----chhHHHhhhhhccCC----
Confidence 8999999999999999999999999 999999999111 0000 11122 778776643322211
Q ss_pred cccccccccCccccccccccccCCCCCCCCCccccCCccccc---cccccCCCCCCCcccCCCCCcccCCCCCCcccccc
Q 000278 114 EEEYGVYRSDSETRHFYGPLEFDDMSNDDGSHRIHLDQDNTA---TKCLSTSPLLSSFEAQGLEGISQHGKKDEQEIGDE 190 (1731)
Q Consensus 114 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1731)
+.+..|+++..-...++.+.. ..|..+. ..++++.|.+.....-+-.+....+. +++.--+.
T Consensus 153 ----------~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~s~p~~~~~~~l~~~~~~~s~~-~~n~~~~~ 217 (1598)
T KOG0230|consen 153 ----------SEMNQYDGPLQQNKHDDVPRA----RLGRKTSVGYEESLSSFPYTSDLNSLLQESNEKSQR-DENCGRSV 217 (1598)
T ss_pred ----------cCCCccccchhccCCCCCccc----ccccccccccccccCCCCCchhHHHHHhhhhhhccc-Cccccccc
Confidence 111122333222222222211 1111111 10111111000000000011000000 11111123
Q ss_pred cccccchhhcccCCCCCCcCCCCCccccCCCCCCchhhhhcCCCCCCCCCccCCccCCcccccceeehehHHHHHhHHHH
Q 000278 191 CEASCSLYAAENVSAGPVDFENDGLLWLPPEPEDEEDEREAGLFDDDDDDDAGDATGEWGYLRTSSSFGSGETRNKDKSS 270 (1731)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~pp~~~d~~d~~~~~~~~~~d~d~~~~evGDGTT~~~s~viLA~ell~~~~~l 270 (1731)
++.++ .+..+....+++||++++++|.||+|++|+||+++++++ +|+++ +|+-|.++.++.+...-+.+...+-...
T Consensus 218 ~~~~~-~~~~~~d~~~~~d~~~~~~~~~p~~pene~dd~~~~~~~-~~~~~-~D~~~~~~~~~~s~s~s~~~~~~~~~~~ 294 (1598)
T KOG0230|consen 218 IEFSS-PNDEEEDEVEILDFENNGLLWEPPEPENEEDDAESVLAD-DDDDE-GDTSGKWNPLRLSNSFSAPEYKSKDKSA 294 (1598)
T ss_pred cccCC-ccccccccccccchhhccCCCCCCCCCcccccchhcccc-ccccc-cccccccccccccCccCCCCccccccch
Confidence 33332 333333333799999999999999999999999999765 33322 3355777664444444444444444444
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhccCcCCCCCchhhHHHHHHHHHHHHHhcCcCCCCCCCCCCCCcEEEEEecCCCc
Q 000278 271 EEHKKAMKNVVDGHFRALVAQLLQVENLSIGDEDDEESWLEIITSLSWEAATLLKPDMSKGGGMDPGGYVKVKCIASGRR 350 (1731)
Q Consensus 271 i~~g~~~~~i~~g~~~al~~~Ll~l~~i~~~~~~d~~~w~~~l~~L~~~A~~~V~~d~~~~~~~Di~~~VkIkkI~GG~~ 350 (1731)
.+....+..+..+++++++.+|+..+.+++..+....+|.+++..|+|+|+..++|+.+.++.|||++|||||||+||++
T Consensus 295 ee~~~~m~~~~~~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~ 374 (1598)
T KOG0230|consen 295 EEDEKVMRNVVESHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSR 374 (1598)
T ss_pred hhcchhhhccccchHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCc
Confidence 45556788889999999999999999998877666789999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEeeecccCCCceeecCCeEEEecccccccccccChhHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 000278 351 CESMVVKGVVCKKNVAHRRMASKMEKPRLLILGGALEYQRVSNLLSSFDTLLQQEMDHLKMAVAKIEAHHPDVLLVEKSV 430 (1731)
Q Consensus 351 ~dS~lv~GvV~~K~~a~k~M~~~i~NprILll~~~Le~~r~~~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlv~k~V 430 (1731)
.||++|+||||.|+++|+.|..++++|||||+.|+|+|+|..+++.++++++.||++||+.+|.+|...+||||+|+++|
T Consensus 375 ~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksV 454 (1598)
T KOG0230|consen 375 VDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSV 454 (1598)
T ss_pred ccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCceeeccCChhHHHHHHHHhCCeEcccccCCCCCCceeeeEEEEEEEeccccccCCCCcccceEEEEEE
Q 000278 431 SRFAQEYLLAKNVSLVLNTRRPLLERISRCTGAQIVPSIDHISSPKLGYCEKFHVERFLEDLGSAGQGGKKLVKTLMFFE 510 (1731)
Q Consensus 431 s~~Al~~L~~~gI~~v~~Vk~~~LerIAr~TGA~Iissld~L~~~~LG~C~~f~v~~~~~e~~~~~~~~~~~~kt~~~fe 510 (1731)
+++|+++|...||+++.|||+..|+||||||||+|++++|.++..+||+|+.|+++++.++| +..||+|||+
T Consensus 455 S~~aqe~L~~k~I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~h--------k~sKTlmffe 526 (1598)
T KOG0230|consen 455 SRIAQELLLDKGISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEH--------KPSKTLMFFE 526 (1598)
T ss_pred HHHHHHHhhccCeEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcc--------cchhhhHHhh
Confidence 99999999999999999999999999999999999999999999999999999999998864 4579999999
Q ss_pred cCCCCCceEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCeEecCCCccCCCCCCCCCCcccCCCCcccccccccCCCC
Q 000278 511 GCPKPLGCTILLRGADGDELKKVKHVVQYGIFAAYHLAVETSFLADEGASLPELPMPAPSIVVPDKSSSIERSISTVPGF 590 (1731)
Q Consensus 511 gc~~~~g~TIlLRG~t~~~L~evKr~l~dal~a~~~l~lE~~~v~GgGa~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 590 (1731)
||++++||||+|||+..++|++||++++++++|+||+.+|.+|++|.||++.........++.+. .+.++++++|++
T Consensus 527 gc~~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~~~~~~~~~---~~~~~~s~~~~~ 603 (1598)
T KOG0230|consen 527 GCPKPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLSIPTSVETS---IINRSISTSPGE 603 (1598)
T ss_pred cCCCCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccccccccccceeccc---ccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999886554443333333 345777777776
Q ss_pred CCCCCCCCCCCCCCCCCCccCCcccccccCCCCccchhhcccccCCCCCCCCCC-CCC---CCCccccCCCCCCCCCCCC
Q 000278 591 SVPASENSPGPQPGPEHKRSHSVPISDLASSTGIGSIVKMEKSLLPSLSNGDSL-QST---EPTSSLTNSTASFSPVPSS 666 (1731)
Q Consensus 591 ~~p~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~---~~~~~~~~~~~l~s~~~~~ 666 (1731)
+.-+.+.+.......++..++.....+. ...+|+... .+. .+... -+.+++.+....+
T Consensus 604 t~st~~~a~~~~~~~e~~~~~~~~~~~~-----------------ls~sp~~~~~~~~~~i~P~~~-~~e~~~~~~~~~~ 665 (1598)
T KOG0230|consen 604 TDSTAEKAPVEALQVEPNRFNGALSSEL-----------------LSSSPFLEFPLDLLEIAPGEL-VIETRLSSYSKGP 665 (1598)
T ss_pred Ccchhcccchhhhccchhhhhcccccce-----------------eecccccccCCCccccCCccc-eeecchhhhcCch
Confidence 5433322221111112222221111111 011111100 000 00000 0000000000000
Q ss_pred ccccCCcCCCCCCCcccccccchhhhhhhhhhhhccCcccccCCCcccCCCCCCccccccchhcccCCCCcccccCCCCC
Q 000278 667 RKVISDSFHTGPLSHHEDKNETASKETLVKDASAANNGQAAKNDHHGVDGLGPLDALDQGIVVNNSQNNSGFVIANQTGD 746 (1731)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1731)
....+.+.... .. ....... .. -+..+.... ......+.. +.+..
T Consensus 666 -----~~~~lv~~~es--------~~---~~~~~s~-~~-------~~~~l~e~~------~~~~~~~~~-----k~~~~ 710 (1598)
T KOG0230|consen 666 -----KQNGLVPAHES--------VL---NDLHEST-LS-------ILSKLPETR------SGTHEGNED-----KGPGL 710 (1598)
T ss_pred -----hhccccccccc--------cc---ccccccc-cc-------ccccccchh------cccchhccc-----cCccc
Confidence 00000000000 00 0000000 00 000000000 000000000 00000
Q ss_pred ccccccc-cCCC--CCCCCccccCCCCCCCCCCCceEEEEEeeeecCCCCccccceEEEEeccCCCCcchHHHHHHHhhc
Q 000278 747 SEVSSTQ-QDSN--NYPEEPKLLKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFD 823 (1731)
Q Consensus 747 ~~~~~~~-~~~~--~~~~~~~~~~~~~~~~p~~HQsI~Vl~Ss~c~~~~~~C~~P~l~~I~fY~~~D~tLG~fLe~~~~~ 823 (1731)
. ....+ +.++ ..++.. ..++.++|.+||+|+||||++|.+++.+|++|||++|+|||++|+||||||+++||+
T Consensus 711 ~-~~~~~~~~~~~~~~~e~~---~s~~~~~~~~HQsilVl~ss~~~~k~~~C~r~~l~~ikyy~~~D~~lg~fL~~~~f~ 786 (1598)
T KOG0230|consen 711 E-PELANNQNIQRPEETEEQ---SSKDALDPSSHQSILVLFSSRSVLKGSVCERPHLLRIKYYGSFDKPLGRFLRDYLFD 786 (1598)
T ss_pred c-ccccccccccchhhhhhh---hcccCCCccccceeEEEEeeeeeccCCccccccEEEEEeeccccchHhHHHHHHHhc
Confidence 0 00000 0000 112222 455667999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeEEEecCcEEEEEEEecCCcCCCCCCCCcEEEEeccCCCCCCCCCCCCcceEeccchhhccchH
Q 000278 824 QNYRCRSCDMPSEAHVHCYTHRQGTLTISVKKLPEILLPGEREGKIWMWHRCLQCPRINGFPPATRRVIMSDAAWGLSFG 903 (1731)
Q Consensus 824 ~~~~C~sC~~pm~~H~r~yvH~~g~ltI~v~~l~~~~lpg~~~~~I~mWs~C~~C~~~~g~~~~T~~v~mSd~tw~~SFg 903 (1731)
+.|.|++|.+||++|+|+|||++|+++|+|++++.. +||+.+|+|||||||++|++. ||+|++|+||++||++|||
T Consensus 787 ~~~~C~sC~~~~laHv~~yvh~~g~l~I~v~~~~e~-l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~Sdaaw~lSfg 862 (1598)
T KOG0230|consen 787 QRYMCPSCNEPMLAHVRCYVHGNGSLTISVKKLPEL-LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVMSDAAWGLSFG 862 (1598)
T ss_pred ccccCccccchHHHHHHHHhhccCceEEEeeccccc-cccccCceEEEEeccccCCCC---CCCcceeEcchhhHhhhHH
Confidence 999999999999999999999999999999999876 999999999999999999974 8999999999999999999
Q ss_pred hHhhhhcccccccCCcCCCCCccccceeeecccCCEEEEEEeeeeeeeEEecCCceeeechhhHHHHHHHHHHHHHHHHH
Q 000278 904 KFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLDFINEYQEWIQKEADEVVSQAEL 983 (1731)
Q Consensus 904 KfLEL~F~~~~~~~r~~~C~H~l~rDh~ryFg~~~~va~f~y~~I~v~ev~lPp~~l~~~~~~~~~l~~e~~~v~~k~~~ 983 (1731)
|||||+||+|+++.|+++|||+||||||||||||+|||+|+|++|++|+|++||.+|+|++..+.|+++|.++|+.||+.
T Consensus 863 KfLEl~fs~~a~~~R~~~C~Hsl~rD~L~ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~~~~~~~~~e~k~v~~k~~~ 942 (1598)
T KOG0230|consen 863 KFLELSFSNHATANRVASCGHSLHRDCLRFFGFGNMVACFRYSPIEVYEVDLPPSKLEFNHIQQEWLQEEIKEVIEKGEE 942 (1598)
T ss_pred HHHHhhhccccccccccCCcchhhhhhhhhcccCCceeeeeeccceeEEEeCChhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhHHHHHHHHHHhHhHHHHH
Q 000278 984 LFSEVLNNLSPILDKKVGPELRHQIVELEGMLQREKAEFEESVQKALSREASKGQPVIDILEINRLRRQLLFQSYMWDHR 1063 (1731)
Q Consensus 984 ~~~~v~~~L~~i~~~~~~~~~~~~i~el~~~l~~e~~~~~~~l~~~~~~~~~~~~~~~~il~lN~l~r~l~~~~~~Wd~~ 1063 (1731)
+|++|.++|.+|+.+.. -+..+.+|+.+|.+|+.+|++.++.++......+++.+|+|.+|++||.|...++.||.+
T Consensus 943 ~~n~v~~~l~~i~~~~~---~~~~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l~l~~~rr~l~~~s~~w~~~ 1019 (1598)
T KOG0230|consen 943 LYNEVLERLSRIAEKDE---NRPLIQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDILALNRDRRALLASSYLWDER 1019 (1598)
T ss_pred HHHHHHHHHHHhhhccc---ccchhhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHHHHHHHHHHHHhhhcccccc
Confidence 99999999999998722 266789999999999999999999999988878899999999999999999999999999
Q ss_pred HHHHhhccccccCCCccccccCCCCCCCccccccccccCCCC--CCCCcccccccccccCccccccCCCCCCCCcCcccc
Q 000278 1064 LVYAANLDIDSNGLKSEISEQGEKIPTSGEKVVQMNVLAMPE--TGSSFYDSLLADAKLDKSSDREEGGDSSTTLSDGFL 1141 (1731)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1141 (1731)
++.+..++|-.. .+....+..++..+ .. ....|+ +... .++.....+. .. .+ ..+..
T Consensus 1020 l~s~~~~~k~~~-~~~~~~~~~~~~~~-----~~--~~r~p~~~k~~~-~~~~~~~~~s------~~-----~~-~~~~~ 1078 (1598)
T KOG0230|consen 1020 LISLSKSLKLES-SKDTKPKESETNST-----AK--RKRSPEPQKGVD-EDSFLTDSSS------DV-----SS-LEHLN 1078 (1598)
T ss_pred chhhhhhhcccc-ccccccccccccCc-----cc--cccCchhhcccc-cccccccccc------cc-----Cc-ccccc
Confidence 998766655110 00000000000000 00 000000 0000 0000000000 00 00 00000
Q ss_pred cccccCCCCCccccccCCCCccccccccCCCcccchhhcccccCCCCCcccchhhhhhhhhccCcccccCCCCCCCCCCc
Q 000278 1142 QETIMGQDSNLLENDQGNISASISFCEQSGSLESEVNVRRTLSEGQVPVVANLSDTLEAAWTGENYQVNNTYGLSDSPLV 1221 (1731)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1221 (1731)
.+....+... +...........+.....+....++.+.+..+ .....+.+.++.+|.|+...+. + .|+.
T Consensus 1079 lp~~~~s~~~----d~~~~~~~~~~~~~~s~~~~~~~v~n~~s~~~-~~~~~~~~~l~~~~~g~r~~~~-----~-~P~s 1147 (1598)
T KOG0230|consen 1079 LPLPEDSNST----DTGLSGPSEVLEDNESIDEMLGSVRNTYSLAN-KVRKILKQILDSATIGNRANPK-----S-SPFS 1147 (1598)
T ss_pred CCCCCccccc----chhccCcccccccccchhhcccccccccchhh-HHHHHHHHhcccccccccccCC-----C-CCCc
Confidence 0000000000 00000000000000000011111111111110 1123345556666666543200 0 0000
Q ss_pred cccccccccccCCccchhhhccCcccccCCCcCcCCCCCCCCCCcccccCCCchhhhh-hhhccccccccccccccCCCC
Q 000278 1222 DSSTVAVMTEGLDLEDHMEVQTGAKVTQSLSPALSSKGPDNMEEPVAWFRMPFLNFYH-SLNKNFLSSSQKLDTMSGYNP 1300 (1731)
Q Consensus 1222 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~k~~~~~~~~p 1300 (1731)
.... ..+ .+.. ....+- ...+...|++.|+.+++. ...++.....++........|
T Consensus 1148 ~~~~-------------~~~-------~~~~-~~~~~~--~e~~~~~~~e~~~~~~~~~~~~~e~~lns~~~~~~~~~~~ 1204 (1598)
T KOG0230|consen 1148 GQDH-------------STD-------LPLE-SNPIHV--LEKELSSWIEDPLTNMYYREATKELSLNSQKNSAETKEPP 1204 (1598)
T ss_pred hhhh-------------ccc-------cccc-cCCccc--cccccHHHHhhhhhhHhHHHHHHHHHhhcchhhcccccCC
Confidence 0000 000 0000 000000 111456799999998876 555554555566666667788
Q ss_pred cccCCcchhhccCCccccccCCCCCceEeecCCCCcceeeeccCCchhccccccccccccccCCCcccccccCccccccc
Q 000278 1301 IYFSSFRDSELKGGARLFLPVGVNDTVVPVYDDEPTSIIAYALVSTEYHVGLMVDDGEKTKEGGDVMSSFSLSDSVNLQS 1380 (1731)
Q Consensus 1301 ~~~s~~~~~~~~~~~~l~~P~~~~d~~V~V~edEPSSiIA~aL~S~dY~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 1380 (1731)
.++++.+...++.+++|++|++.+|.+|+||||||+|+|||||++++|..+. .+.... .+ ...| ++..
T Consensus 1205 k~~~s~~~s~~~~~~rLl~p~~~ndl~vp~~edpp~s~ia~al~s~~~~~q~-~~p~~s--------is--~~~S-~~~~ 1272 (1598)
T KOG0230|consen 1205 KYPSSESESEPESSSRLLLPLGLNDLVVPVYEDPPPSLIAYALSSKERINQE-SSPGLS--------IS--FSLS-NLQG 1272 (1598)
T ss_pred cCcccccccccccccceeccccCCcccCCcccCCCchhhhhhhcchhhccCC-CCCCcc--------cc--cccc-cccc
Confidence 8888877666788999999999999999999999999999999998888776 321100 00 0011 0000
Q ss_pred ccchhhhh-hhhccccCCcccccccccCCCccccCCccCc--CCccCceEEecCCCCCcceeEEEEEecHHHHHHHHHHh
Q 000278 1381 HLSADELT-LDLYRSLGSTDESILSLSGSRSSLILDPLSY--TKAFHPKVSFKDDGPLGQVKYSVTCYYARRFEALRKIC 1457 (1731)
Q Consensus 1381 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~y~p~~F~~LR~~~ 1457 (1731)
...+.. ....++-..+.. ++.++......+.+.. ....|++++|++ |+++|+|+||||++|++||+.|
T Consensus 1273 --~~s~~~e~~~~~~~sl~~s---~l~~s~~~~~e~l~~~~~~~~~h~~~~f~e----gk~k~svk~~yAe~F~~LR~~c 1343 (1598)
T KOG0230|consen 1273 --RLSKISEFDDTKSESLDNS---GLESSSYRRGENLQKSKLETRTHLEYQFSE----GKAKYSVKCYYAEQFRALRKIC 1343 (1598)
T ss_pred --chhhhhhhhhhhhcccccc---ccchhhhcchhhccccccccccceeeeccC----CceEEEEEEEehhhHHHHHHhh
Confidence 000000 000000001110 1111111111111222 456788888876 5689999999999999999999
Q ss_pred CCChHHHHHhhcccccCCCCCCCcceeEEEecCCcEEEeecCHHHHHHHHHHHHHHHHHHHhhcCCCCCceeeeeeeEEE
Q 000278 1458 CPSELDYVRSLSRCKKWGAKGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYFKYLSESISTGSPTCLAKILGIYQ 1537 (1731)
Q Consensus 1458 ~~~~~~y~~Sl~~~~~~~~~gGKSgs~F~~T~D~rfiiKti~~~E~~~f~~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~ 1537 (1731)
|.++.+||+||+||.+|.++||||||+|+||.|+|||||+|++.|+++|++|||+||+||.++++++.||+||||||+||
T Consensus 1344 ~~sEe~fIrSLsRc~~W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyq 1423 (1598)
T KOG0230|consen 1344 CPSEEDFIRSLSRCVKWEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQ 1423 (1598)
T ss_pred CchHHHHHHHHhcCcccccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCceeeeeEEEeecccCCCCceeeeecCCccccccCCCCCCCcccccchhHhhhCCCCCeeeChHHHHHHHHH
Q 000278 1538 VTTKHLKGGRESKMDVLVMENLLFSRSVTQLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERA 1617 (1731)
Q Consensus 1538 i~~~~~~~g~~~k~~~iVMeNlf~~~~i~~~yDLKGS~~~R~~~~~~~~~~vl~D~n~~~~~~~~~i~l~~~~k~~l~~~ 1617 (1731)
|.+|+.++|++.|+++||||||||+++++|+||||||+|||+++.+++.+.||+|+||+++++++||||++++|+.|.++
T Consensus 1424 V~vK~~~sgke~K~DvmVMENLfY~r~vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~a 1503 (1598)
T KOG0230|consen 1424 VSVKSPKSGKETKMDVMVMENLFYGRKVSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMMWTSPIYVGSHSKRLLRRA 1503 (1598)
T ss_pred EEEecCCCCceeEeeeeeehhhhhccccceeeeccchhhhccCCCCCCCceEEecHHHHhhhhcCCeeehHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCCcccccceEEEecCcceEEEeeeehhhccchhhhhhHhhhhccccCCCCCCCCcccChHHHHHHHHHHH
Q 000278 1618 VWNDTAFLASIDVMDYSLLVGVDEENHQLVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAM 1697 (1731)
Q Consensus 1618 l~~Dt~FL~~~nvMDYSLLvGi~~~~~~~~~GIID~L~~yt~~KklE~~~K~~~~~~g~~~~~~Tvv~P~~Y~~RF~~~m 1697 (1731)
|||||.||+++||||||||||||++++|||+||||||||||||||||+|||..| +||+++..||||+|++|++||++||
T Consensus 1504 iwNDT~FLas~~VMDYSLLVGvD~e~~ELvlGIIDfiRtYTWDKkLESWVK~sG-l~gpk~~~PTVVSP~qYK~RFRkAM 1582 (1598)
T KOG0230|consen 1504 IWNDTSFLASINVMDYSLLVGVDDENNELVLGIIDFIRTYTWDKKLESWVKSSG-LGGPKNKQPTVVSPEQYKTRFRKAM 1582 (1598)
T ss_pred HhcchHHhhhcccceeeeEEEeeCCCCeEEEEehHhhhhhhhhhhhhhheeccc-cccCCCCCCceeCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 6788999999999999999999999
Q ss_pred HhhcccCCCcccCCcc
Q 000278 1698 TTYFLMVPDQWFPLST 1713 (1731)
Q Consensus 1698 ~~yf~~vpd~W~~~~~ 1713 (1731)
++||++|||+|+++|.
T Consensus 1583 d~YfL~VPD~Wtg~g~ 1598 (1598)
T KOG0230|consen 1583 DTYFLMVPDQWTGLGV 1598 (1598)
T ss_pred hheeeecCCcccCCCC
Confidence 9999999999999763
|
|
| >COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >smart00330 PIPKc Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in [] | Back alignment and domain information |
|---|
| >TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02339 thermosome_arch thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03343 cpn60 cpn60 chaperonin family | Back alignment and domain information |
|---|
| >cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >PTZ00212 T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
| >TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit | Back alignment and domain information |
|---|
| >cd00309 chaperonin_type_I_II chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit | Back alignment and domain information |
|---|
| >COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism | Back alignment and domain information |
|---|
| >KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK00013 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PTZ00114 Heat shock protein 60; Provisional | Back alignment and domain information |
|---|
| >PRK12849 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12851 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >cd03344 GroEL GroEL_like type I chaperonin | Back alignment and domain information |
|---|
| >KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02348 GroEL chaperonin GroL | Back alignment and domain information |
|---|
| >PRK12852 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12850 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PLN03167 Chaperonin-60 beta subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14104 chaperonin GroEL; Provisional | Back alignment and domain information |
|---|
| >CHL00093 groEL chaperonin GroEL | Back alignment and domain information |
|---|
| >cd03333 chaperonin_like chaperonin_like superfamily | Back alignment and domain information |
|---|
| >KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >KOG0993 consensus Rab5 GTPase effector Rabaptin-5 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1731 | ||||
| 3iyg_G | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 1e-19 | ||
| 1q3s_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 6e-17 | ||
| 1q3r_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 6e-17 | ||
| 1q2v_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 7e-17 | ||
| 1gml_A | 178 | Crystal Structure Of The Mouse Cct Gamma Apical Dom | 8e-17 | ||
| 3p9d_C | 590 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 3e-16 | ||
| 3ko1_A | 553 | Cystal Structure Of Thermosome From Acidianus Tengc | 9e-15 | ||
| 1a6d_A | 545 | Thermosome From T. Acidophilum Length = 545 | 4e-13 | ||
| 1a6d_B | 543 | Thermosome From T. Acidophilum Length = 543 | 9e-12 | ||
| 2ybx_A | 394 | Crystal Structure Of Human Phosphatidylinositol-5-P | 3e-11 | ||
| 3aq1_B | 500 | Open State Monomer Of A Group Ii Chaperonin From Me | 3e-11 | ||
| 1dvp_A | 220 | Crystal Structure Of The Vhs And Fyve Tandem Domain | 4e-11 | ||
| 1bo1_A | 416 | Phosphatidylinositol Phosphate Kinase Type Ii Beta | 9e-11 | ||
| 3izh_A | 513 | Mm-Cpn D386a With Atp Length = 513 | 1e-10 | ||
| 3los_A | 543 | Atomic Model Of Mm-Cpn In The Closed State Length = | 1e-10 | ||
| 3izi_A | 513 | Mm-Cpn Rls With Atp Length = 513 | 1e-10 | ||
| 3rus_A | 543 | Crystal Structure Of Cpn-Rls In Complex With Adp Fr | 2e-10 | ||
| 2gk9_A | 392 | Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty | 2e-10 | ||
| 3j02_A | 491 | Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun | 3e-09 | ||
| 3izn_A | 491 | Mm-Cpn Deltalid With Atp Length = 491 | 3e-09 | ||
| 3iyf_A | 521 | Atomic Model Of The Lidless Mm-Cpn In The Open Stat | 4e-09 | ||
| 3izk_A | 491 | Mm-Cpn Rls Deltalid With Atp Length = 491 | 4e-09 | ||
| 1hyi_A | 65 | Solution Structure Of The Eea1 Fyve Domain Complexe | 8e-09 | ||
| 1vfy_A | 73 | Phosphatidylinositol-3-Phosphate Binding Fyve Domai | 9e-09 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 1e-08 | ||
| 1e0r_B | 159 | Beta-Apical Domain Of Thermosome Length = 159 | 1e-08 | ||
| 1ass_A | 159 | Apical Domain Of The Chaperonin From Thermoplasma A | 2e-08 | ||
| 3t7l_A | 90 | Crystal Structure Of The Fyve Domain Of Endofin (Zf | 3e-08 | ||
| 3zyq_A | 226 | Crystal Structure Of The Tandem Vhs And Fyve Domain | 3e-08 | ||
| 1z2q_A | 84 | High-Resolution Solution Structure Of The Lm5-1 Fyv | 2e-07 | ||
| 2yqm_A | 89 | Solution Structure Of The Fyve Domain In Zinc Finge | 4e-07 | ||
| 2yw8_A | 82 | Crystal Structure Of Human Run And Fyve Domain-Cont | 6e-07 | ||
| 3iyg_H | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 8e-06 | ||
| 3iyg_E | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 1e-05 | ||
| 3mpx_A | 434 | Crystal Structure Of The Dh And Ph-1 Domains Of Hum | 5e-05 | ||
| 3p9d_B | 527 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 7e-05 | ||
| 3p9d_G | 550 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 7e-05 | ||
| 3iyg_D | 518 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 3e-04 |
| >pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
|
| >pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 | Back alignment and structure |
| >pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 | Back alignment and structure |
| >pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 | Back alignment and structure |
| >pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain (Triclinic) Length = 178 | Back alignment and structure |
| >pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 590 | Back alignment and structure |
| >pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 | Back alignment and structure |
| >pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 | Back alignment and structure |
| >pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 | Back alignment and structure |
| >pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394 | Back alignment and structure |
| >pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 | Back alignment and structure |
| >pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of Hrs, A Protein Involved In Membrane Trafficking And Signal Transduction Length = 220 | Back alignment and structure |
| >pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416 | Back alignment and structure |
| >pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 | Back alignment and structure |
| >pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 | Back alignment and structure |
| >pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 | Back alignment and structure |
| >pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 | Back alignment and structure |
| >pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 | Back alignment and structure |
| >pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 | Back alignment and structure |
| >pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 | Back alignment and structure |
| >pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|1HYI|A Chain A, Solution Structure Of The Eea1 Fyve Domain Complexed With Inositol 1,3-Bisphosphate Length = 65 | Back alignment and structure |
| >pdb|1VFY|A Chain A, Phosphatidylinositol-3-Phosphate Binding Fyve Domain Of Vps27p Protein From Saccharomyces Cerevisiae Length = 73 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome Length = 159 | Back alignment and structure |
| >pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma Acidophilum Length = 159 | Back alignment and structure |
| >pdb|3T7L|A Chain A, Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At 1.1a Resolution Length = 90 | Back alignment and structure |
| >pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) At 1.48 A Resolution Length = 226 | Back alignment and structure |
| >pdb|1Z2Q|A Chain A, High-Resolution Solution Structure Of The Lm5-1 Fyve Domain From Leishmania Major Length = 84 | Back alignment and structure |
| >pdb|2YQM|A Chain A, Solution Structure Of The Fyve Domain In Zinc Finger Fyve Domain-Containing Protein 12 Length = 89 | Back alignment and structure |
| >pdb|2YW8|A Chain A, Crystal Structure Of Human Run And Fyve Domain-Containing Protein Length = 82 | Back alignment and structure |
| >pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3MPX|A Chain A, Crystal Structure Of The Dh And Ph-1 Domains Of Human Fgd5 Length = 434 | Back alignment and structure |
| >pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 527 | Back alignment and structure |
| >pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 550 | Back alignment and structure |
| >pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 518 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
Score = 185 bits (470), Expect = 4e-51
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 1401 SILSLSGSRSSLILDPLSYTKAFHPKVSFKDDGPL-----GQVKYSVTCYYARRFEALRK 1455
SI LS + ++L P F K D L + Y F LR+
Sbjct: 37 SINELSHVQIPVMLMP----DDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRE 92
Query: 1456 ICCPSELDYVRSLSRCKKW-GAKGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYF 1514
+ D+ SL+R +S F + D R+IIK +T ++ +Y
Sbjct: 93 RFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYH 152
Query: 1515 KYLSESISTGSPTCLAKILGIYQVTTKHLKGGRESKMDVLVMENLLFSR-SVTQLYDLKG 1573
+Y+ E T L + LG+Y++ ++ V+V N+ R SV + YDLKG
Sbjct: 153 QYIVEC---HGITLLPQFLGMYRLNVDG------VEIYVIVTRNVFSHRLSVYRKYDLKG 203
Query: 1574 SSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDY 1633
S+ +R D + ++ ++ I++ + K++ + D FLA + +MDY
Sbjct: 204 STVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDY 263
Query: 1634 SLLVGVDEENHQ 1645
SLLVG+ +
Sbjct: 264 SLLVGIHDVERA 275
|
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Length = 178 | Back alignment and structure |
|---|
| >3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 | Back alignment and structure |
|---|
| >3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 | Back alignment and structure |
|---|
| >3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 | Back alignment and structure |
|---|
| >1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 | Back alignment and structure |
|---|
| >3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 | Back alignment and structure |
|---|
| >3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 | Back alignment and structure |
|---|
| >3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 | Back alignment and structure |
|---|
| >3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 | Back alignment and structure |
|---|
| >3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 | Back alignment and structure |
|---|
| >3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 | Back alignment and structure |
|---|
| >3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 | Back alignment and structure |
|---|
| >3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 | Back alignment and structure |
|---|
| >3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 | Back alignment and structure |
|---|
| >3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 | Back alignment and structure |
|---|
| >3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 | Back alignment and structure |
|---|
| >3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 | Back alignment and structure |
|---|
| >3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 | Back alignment and structure |
|---|
| >3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Length = 159 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1731 | ||||
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 1e-50 | |
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 3e-12 | |
| d1gmla_ | 168 | c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musc | 9e-37 | |
| d1q3qa2 | 153 | c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon | 1e-34 | |
| d1a6db2 | 152 | c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon | 4e-33 | |
| d1assa_ | 152 | c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermo | 3e-31 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 2e-21 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 3e-20 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 4e-20 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 1e-17 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 6e-16 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 5e-13 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 1e-50
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 24/271 (8%)
Query: 1401 SILSLSGSRSSLILDPLSYTKAFHPKVSFKDDG-----PLGQVKYSVTCYYARRFEALRK 1455
+I LS ++L P F K D ++ Y F LR+
Sbjct: 20 TINELSNVPVPVMLMP----DDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRE 75
Query: 1456 ICCPSELDYVRSLSRCKKWGAKG-GKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPEYF 1514
+ DY S++R + G+ F T D RF+IK V+ ++ +Y
Sbjct: 76 RFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYH 135
Query: 1515 KYLSESISTGSPTCLAKILGIYQVTTKHLKGGRESKMDVLVMENLLFSR-SVTQLYDLKG 1573
+++ E T L + LG+Y++T + ++V N+ R +V + YDLKG
Sbjct: 136 QFIVEC---HGNTLLPQFLGMYRLTVDG------VETYMVVTRNVFSHRLTVHRKYDLKG 186
Query: 1574 SSRSRYNPDSSG--SNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVM 1631
S+ +R D D + + + VG ++K+ + D FLA + +M
Sbjct: 187 STVAREASDKEKAKDLPTFKDNDFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIM 244
Query: 1632 DYSLLVGVDEENHQLVLGIIDFMRQYTWDKH 1662
DYSLLVG+ + + + R +
Sbjct: 245 DYSLLVGIHDVDRAEQEEMEVEERAEDEECE 275
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Length = 168 | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 153 | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1731 | |||
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1gmla_ | 168 | Thermosome, A-domain {Mouse (Mus musculus), gamma | 100.0 | |
| d1q3qa2 | 153 | Thermosome, A-domain {Archaeon Thermococcus sp. ks | 99.97 | |
| d1assa_ | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1a6db2 | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.47 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.36 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.33 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.27 | |
| d1kida_ | 193 | GroEL, A domain {Escherichia coli [TaxId: 562]} | 99.0 | |
| d1sjpa2 | 184 | GroEL, A domain {Mycobacterium tuberculosis, GroEL | 99.0 | |
| d1q3qa3 | 107 | Thermosome, I domain {Archaeon Thermococcus sp. ks | 98.9 | |
| d1ioka2 | 176 | GroEL, A domain {Paracoccus denitrificans [TaxId: | 98.87 | |
| d1srva_ | 145 | GroEL, A domain {Thermus thermophilus [TaxId: 274] | 98.86 | |
| d1a6db3 | 107 | Thermosome, I domain {Archaeon Thermoplasma acidop | 98.74 | |
| d1a6da3 | 105 | Thermosome, I domain {Archaeon Thermoplasma acidop | 98.73 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.6 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 98.43 | |
| d1q3qa1 | 258 | Thermosome, E domain {Archaeon Thermococcus sp. ks | 97.48 | |
| d1a6db1 | 243 | Thermosome, E domain {Archaeon Thermoplasma acidop | 97.46 | |
| d1sjpa1 | 180 | GroEL, E domain {Mycobacterium tuberculosis, GroEL | 97.43 | |
| d1a6da1 | 245 | Thermosome, E domain {Archaeon Thermoplasma acidop | 97.39 | |
| d1kp8a1 | 252 | GroEL, E domain {Escherichia coli [TaxId: 562]} | 97.05 | |
| d1ioka1 | 252 | GroEL, E domain {Paracoccus denitrificans [TaxId: | 96.17 | |
| d1we3a1 | 255 | GroEL, E domain {Thermus thermophilus [TaxId: 274] | 94.35 | |
| d1w2fa_ | 276 | Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {H | 88.46 | |
| d1wffa_ | 85 | ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus | 80.53 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=537.12 Aligned_cols=262 Identities=27% Similarity=0.475 Sum_probs=231.5
Q ss_pred CEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC-CCCCCCEEEEEECCCCEEEEECCHHHH
Q ss_conf 5587148999865139999915999999998809996889996213655777-899752139974178389960599999
Q 000278 1425 PKVSFKDDGPLGQVKYSVTCYYARRFEALRKICCPSELDYVRSLSRCKKWGA-KGGKSNVFFAKTLDDRFIIKQVTKTEL 1503 (1731)
Q Consensus 1425 ~~~~f~~~~~~~~~~~~~~~y~p~~F~~LR~~~~~~~~~~i~SL~~~~~~~~-sgGKSgs~F~~T~D~rfiiKtis~~E~ 1503 (1731)
....|+.++.+ .+|+||+|+|.+|++||++||+++++|+.||+++..|.. ++|||||+||+|.|+|||||||++.|+
T Consensus 47 ~~~~~~~~~~~--~~fkfk~Y~P~vF~~lR~~fgi~~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~ 124 (383)
T d1bo1a_ 47 DNHLFNKENLP--SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDV 124 (383)
T ss_dssp ECBSSSCSSSC--SEEEEEEECHHHHHHHHHHTTCCHHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHH
T ss_pred CCCCCCCCCCC--CCEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHH
T ss_conf 77778867798--8707998379999999998198989999972788654345657767867880699689998579999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCC-CCEEEEECCCCCCCCCCCC
Q ss_conf 999999999999998404999992201454278987412689812465689852145788-7203430677644456889
Q 000278 1504 ESFIKFAPEYFKYLSESISTGSPTCLAKILGIYQVTTKHLKGGRESKMDVLVMENLLFSR-SVTQLYDLKGSSRSRYNPD 1582 (1731)
Q Consensus 1504 ~~f~~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~g~~~k~~~iVMeNlf~~~-~i~~~yDLKGS~~~R~~~~ 1582 (1731)
+.|+++||.||+|+.++ +++|||+||||+|+|+++ | .+.+||||+|+|+++ .|+++||||||+++|.+.+
T Consensus 125 ~~l~~~l~~Y~~h~~~~---n~~TLL~k~~Gly~i~~~----~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~ 195 (383)
T d1bo1a_ 125 AEMHNILKKYHQFIVEC---HGNTLLPQFLGMYRLTVD----G--VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASD 195 (383)
T ss_dssp HHHHHHHHHHHHHHHTT---TTCCSSCCEEEEEEEEET----T--EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCS
T ss_pred HHHHHHHHHHHHHHHHC---CCCCCHHHHHEEEEEEEC----C--CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 99999989999999860---787578763430378747----9--52799998424567765103676158632567675
Q ss_pred CC--CCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC-------------------
Q ss_conf 99--986322514376418999736393889999999983010123597102510388744-------------------
Q 000278 1583 SS--GSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDE------------------- 1641 (1731)
Q Consensus 1583 ~~--~~~~vl~D~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~nimDYSLLvGi~~------------------- 1641 (1731)
.+ ....||||.||++. ..+|+|+++.|..|..||++||.||+++||||||||||||.
T Consensus 196 ~~~~~~~~~lKD~df~~~--~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~ 273 (383)
T d1bo1a_ 196 KEKAKDLPTFKDNDFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEE 273 (383)
T ss_dssp GGGSSSCCEECHHHHHHT--TCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC
T ss_pred CCCCCCCHHHHHHHHHHC--CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCC
T ss_conf 334555204656778764--688230799999999999999999987786750436755122111122110011245554
Q ss_pred ----------------------------------------------------CCCEEEEEEEEHHHCCCHHHHHHHHHHH
Q ss_conf ----------------------------------------------------7626887645123114202466676544
Q 000278 1642 ----------------------------------------------------ENHQLVLGIIDFMRQYTWDKHLETWVKA 1669 (1731)
Q Consensus 1642 ----------------------------------------------------~~~~l~~GIID~l~~yt~~KklE~~~K~ 1669 (1731)
++..||+|||||||+|||.||+||++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ks 353 (383)
T d1bo1a_ 274 CENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKT 353 (383)
T ss_dssp -----------------------------------CCSCCTTTSTTEEECSSTTEEEEEEECCSCC--------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 44555564322345789788302221553346644577765445445678997599999999715779689999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 022499999997413937899999999986134
Q 000278 1670 SGILGGPKNASPTVISPKQYKKRFRKAMTTYFL 1702 (1731)
Q Consensus 1670 ~~~~~g~~~~~~Tvv~P~~Y~~RF~~~m~~~f~ 1702 (1731)
. ..++ +.++|||+|++|++||++||.++|.
T Consensus 354 l--~~~~-g~~IS~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 354 V--KHGA-GAEISTVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp ------C-CCSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred H--CCCC-CCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 2--1188-9896127989999999999998649
|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|