Citrus Sinensis ID: 000292
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1713 | 2.2.26 [Sep-21-2011] | |||||||
| F4J5S1 | 1407 | Clustered mitochondria pr | no | no | 0.251 | 0.306 | 0.376 | 5e-89 | |
| B0W2S0 | 1377 | Clustered mitochondria pr | N/A | no | 0.527 | 0.656 | 0.237 | 4e-56 | |
| O15818 | 1320 | Clustered mitochondria pr | yes | no | 0.255 | 0.331 | 0.305 | 4e-56 | |
| Q17N71 | 1442 | Clustered mitochondria pr | N/A | no | 0.266 | 0.316 | 0.270 | 9e-45 | |
| B4GAM1 | 1435 | Protein clueless OS=Droso | N/A | no | 0.244 | 0.291 | 0.259 | 4e-44 | |
| Q291J5 | 1435 | Protein clueless OS=Droso | yes | no | 0.244 | 0.291 | 0.259 | 2e-43 | |
| A1ZAB5 | 1448 | Protein clueless OS=Droso | yes | no | 0.272 | 0.322 | 0.249 | 1e-42 | |
| B3MIW0 | 1450 | Protein clueless OS=Droso | N/A | no | 0.266 | 0.315 | 0.246 | 2e-42 | |
| B3NPV8 | 1452 | Protein clueless OS=Droso | N/A | no | 0.266 | 0.314 | 0.243 | 3e-42 | |
| B4P6P7 | 1451 | Protein clueless OS=Droso | N/A | no | 0.266 | 0.314 | 0.243 | 3e-42 |
| >sp|F4J5S1|CLU_ARATH Clustered mitochondria protein OS=Arabidopsis thaliana GN=FMT PE=2 SV=1 | Back alignment and function desciption |
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Score = 330 bits (847), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 271/473 (57%), Gaps = 42/473 (8%)
Query: 520 EELIDLSHNYYVEVALPKLVTDFGSLELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSEKL 579
EE + +Y V+V LPK + D +LE+SP+DG+TLT+ +H G+ +R +G V + L
Sbjct: 787 EENVKKVSSYLVDVVLPKFIEDLCTLEVSPMDGQTLTEALHAHGVNVRYIGRVANGVKHL 846
Query: 580 SHVQSLCIHEMIVRAFKHIIQAVISAVGNTQRMAVSIAAALNLMLGVHESDGLNKSHNVH 639
H+ LC++E+ VR+ KHI++ ++ + + + +++ LN G +++ G S N
Sbjct: 847 PHLWDLCLNEITVRSAKHILKDILRDIED-HDIGSAVSHFLNCFFGNYQTAGGKASANSS 905
Query: 640 P-----------------------------------------LVWRWLELFLMKRYEWDL 658
++W ++ F +YE++L
Sbjct: 906 TAKNQKKFFGADQPITKKGQGRGKGKASSKKSFSSYMMVDSNILWSDIQEFAKAKYEFEL 965
Query: 659 NGLNFKDVRKFAILRGLCHKVGIELVSRDFDMDSPSPFRKIDVVSLVPVHKQAACSSADG 718
L+ +K ++LR LC KVG+ + +R +D + +PF D++ L PV K + ++
Sbjct: 966 PELSRTTAKKVSVLRNLCQKVGVSIAARKYDFSANTPFETSDILDLRPVIKHSVPVCSEA 1025
Query: 719 RQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQ 778
+ L+E K L +G L ++ T+ ++A + L V GP HR A LA+VLYH GD
Sbjct: 1026 KDLVEMGKVQLAEGMLSESYTFFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAG 1085
Query: 779 ATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGP 838
A + Q K L INER LGLDHPDT SYG++A+FY+ L TELAL+ + RAL LL L+ GP
Sbjct: 1086 AIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALQNMGRALLLLGLSSGP 1145
Query: 839 SHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSL 898
HP+ AAT+INVAMM + +G + ALRYL +ALK N+RLLGP+HIQTA YHA+AIA +
Sbjct: 1146 DHPDVAATFINVAMMYQDMGKMDTALRYLQEALKKNERLLGPEHIQTAVCYHALAIAFNC 1205
Query: 899 MEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNG 951
M A+ LS QHE+ T IL +LG DD RT+D+ W++ F+ + + + G
Sbjct: 1206 MGAFKLSHQHEKKTYDILVKQLGDDDSRTRDSLNWMKTFKMRELQMTAQKQKG 1258
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Involved in proper cytoplasmic distribution of mitochondria. Arabidopsis thaliana (taxid: 3702) |
| >sp|B0W2S0|CLU_CULQU Clustered mitochondria protein homolog OS=Culex quinquefasciatus GN=CPIJ001445 PE=3 SV=1 | Back alignment and function description |
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| >sp|O15818|CLU_DICDI Clustered mitochondria protein homolog OS=Dictyostelium discoideum GN=clua PE=1 SV=2 | Back alignment and function description |
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| >sp|Q17N71|CLU_AEDAE Clustered mitochondria protein homolog OS=Aedes aegypti GN=AAEL000794 PE=3 SV=1 | Back alignment and function description |
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| >sp|B4GAM1|CLU_DROPE Protein clueless OS=Drosophila persimilis GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|Q291J5|CLU_DROPS Protein clueless OS=Drosophila pseudoobscura pseudoobscura GN=clu PE=3 SV=2 | Back alignment and function description |
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| >sp|A1ZAB5|CLU_DROME Protein clueless OS=Drosophila melanogaster GN=clu PE=1 SV=1 | Back alignment and function description |
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| >sp|B3MIW0|CLU_DROAN Protein clueless OS=Drosophila ananassae GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|B3NPV8|CLU_DROER Protein clueless OS=Drosophila erecta GN=clu PE=3 SV=1 | Back alignment and function description |
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| >sp|B4P6P7|CLU_DROYA Protein clueless OS=Drosophila yakuba GN=clu PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1713 | ||||||
| 255564713 | 1872 | eukaryotic translation initiation factor | 0.987 | 0.903 | 0.702 | 0.0 | |
| 359489732 | 1863 | PREDICTED: protein KIAA0664 homolog [Vit | 0.981 | 0.902 | 0.699 | 0.0 | |
| 356520282 | 1840 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.905 | 0.658 | 0.0 | |
| 356560227 | 1846 | PREDICTED: protein TIF31 homolog [Glycin | 0.973 | 0.903 | 0.655 | 0.0 | |
| 449487415 | 1856 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.966 | 0.891 | 0.648 | 0.0 | |
| 449445826 | 1856 | PREDICTED: uncharacterized protein LOC10 | 0.966 | 0.891 | 0.648 | 0.0 | |
| 334182214 | 1787 | tetratricopeptide repeat-containing prot | 0.917 | 0.879 | 0.596 | 0.0 | |
| 42561588 | 1797 | tetratricopeptide repeat-containing prot | 0.917 | 0.874 | 0.593 | 0.0 | |
| 297842986 | 1793 | tetratricopeptide repeat-containing prot | 0.918 | 0.877 | 0.590 | 0.0 | |
| 297745448 | 1446 | unnamed protein product [Vitis vinifera] | 0.737 | 0.873 | 0.714 | 0.0 |
| >gi|255564713|ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223537439|gb|EEF39067.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2377 bits (6161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1206/1716 (70%), Positives = 1397/1716 (81%), Gaps = 24/1716 (1%)
Query: 1 MSHAFPKLSSFYEFFSLSHLTPPLQFIRKAPKRRVEEISPDDHLLSLDVKLCNGKMVNVE 60
MSH+ PKL SFYEFFSLSHLTPP QFIRKA KR+++EI+ DDHL SLDVKLCNGK+V+VE
Sbjct: 178 MSHSRPKLGSFYEFFSLSHLTPPFQFIRKATKRQIDEIAEDDHLFSLDVKLCNGKLVHVE 237
Query: 61 ACRKGFYSVGKQRILCHNIVDLLGQLSRAFDNAYNELMNAFSERNKFGNLPYGFRANTWL 120
ACRKGFY+VGKQRILCH++VDLL QLSRAF+NAY++LM AFSERNKFGN PYGFRANTWL
Sbjct: 238 ACRKGFYNVGKQRILCHDLVDLLRQLSRAFENAYDDLMKAFSERNKFGNFPYGFRANTWL 297
Query: 121 IPPIAAQSPSVFPPLPAEDEAWGGNGGGLGRDGKSDLIPWANEFLFVASMPCKTAEERQI 180
IPP AAQSP FP LP EDE WGGNGGGLGRDGKSDLIPWA+EFL++ASMPCKTAEERQ+
Sbjct: 298 IPPFAAQSPLAFPHLPVEDETWGGNGGGLGRDGKSDLIPWASEFLYLASMPCKTAEERQV 357
Query: 181 RDRKAFLLHNLFVDVAIFRAIKAVHHVMGKPELI-YPSNCKILYTEIIGGLRIAIMKDAS 239
RDRKAFLLH+LFVD+AIFRAIKAV V P ++ + KIL+TE +G L I +MKDAS
Sbjct: 358 RDRKAFLLHSLFVDIAIFRAIKAVQQVRVNPNVLSLVGSSKILHTERLGDLSITVMKDAS 417
Query: 240 NACCKVDTKIDGSQATGVDKNNLVERNLLKGITADENTAAHDVATLGVVNVRYCGYIAVV 299
NA CKVD+KIDG QATG+DK NL+ERNLLKGITADENTAAHD+ATLG+VNVRYCGY AVV
Sbjct: 418 NASCKVDSKIDGLQATGLDKRNLLERNLLKGITADENTAAHDIATLGIVNVRYCGYFAVV 477
Query: 300 KVQERENKKVGPLFQSIELEQPEGGANALNINSLRLLIHETTTLEDNKPAPNLQNLEREE 359
KV E K V P QSIELEQPEGGANALNINSLRLL+H+T E +KP P+LQ LE E+
Sbjct: 478 KVDGAEEKNVRPPSQSIELEQPEGGANALNINSLRLLLHKTIPSESSKPMPHLQTLESED 537
Query: 360 LNASQMFVERLLEESIAKLEEEKPEREHFVRWELGACWIQHLQDQKNAEKDKKLSKEKAK 419
L+ASQ FVER+LEESIAKLE E+ E++HFVRWELGACWIQHLQDQKN EKDKK EK K
Sbjct: 538 LSASQAFVERILEESIAKLEHEELEQDHFVRWELGACWIQHLQDQKNTEKDKKSPTEKNK 597
Query: 420 KLSNEKAKSEMKVEGLGTPLKSLKNNRKKSEGSNHKIHSETLKSQADGVNGESEKATSAS 479
+ S+EK EMKVEGLGTPL+SLKN++KK E +N KI SE +S DG+ GE E A SAS
Sbjct: 598 RPSSEK---EMKVEGLGTPLRSLKNSKKKLEETNMKIQSERSRSSIDGMVGEIENANSAS 654
Query: 480 IEARLESRDKENELALKNLLSDEAFARLKESETGLHCKSLEELIDLSHNYYVEVALPKLV 539
+E++LE+ KENEL L+ +LSD AF RL+ES+TGLHCKSL+EL+D+S YY++VALPKLV
Sbjct: 655 MESQLETTAKENELTLQMMLSDSAFTRLRESDTGLHCKSLQELLDMSQKYYIDVALPKLV 714
Query: 540 TDFGSLELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHII 599
DFGSLELSPVDGRTLTDFMHTRGL+MRSLGHVVKLSEKLSHVQSLCIHEMIVRA+KHI+
Sbjct: 715 ADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAYKHIL 774
Query: 600 QAVISAVGNTQRMAVSIAAALNLMLGVHESDGLNKSHNVHPLVWRWLELFLMKRYEWDLN 659
QAVI+AV N ++MA+SIAAALNLMLGV E +KS++V+ LVW+WLE+FL KRYEWDL+
Sbjct: 775 QAVIAAVVNHEKMAISIAAALNLMLGVPERGDSDKSYHVNSLVWKWLEVFLKKRYEWDLS 834
Query: 660 GLNFKDVRKFAILRGLCHKVGIELVSRDFDMDSPSPFRKIDVVSLVPVHKQAACSSADGR 719
NFKDVRKFAILRGLCHKVGIELV RDFDMDSP PFRK D+VSLVPVHKQAACSSADGR
Sbjct: 835 RSNFKDVRKFAILRGLCHKVGIELVPRDFDMDSPHPFRKSDIVSLVPVHKQAACSSADGR 894
Query: 720 QLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQA 779
QLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQA
Sbjct: 895 QLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQA 954
Query: 780 TIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPS 839
TIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPS
Sbjct: 955 TIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPS 1014
Query: 840 HPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLM 899
HPNTAATYINVAMMEEGLGNVH+ALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLM
Sbjct: 1015 HPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLM 1074
Query: 900 EAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASI 959
EAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASI
Sbjct: 1075 EAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASI 1134
Query: 960 ASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQDNNLTSPDGSSKEVLR 1019
ASKGHLSVSDLLDYINPS DTKGR+ +++RK+Y+AK+K ++L S + S +E+ +
Sbjct: 1135 ASKGHLSVSDLLDYINPSRDTKGRDFVSVRRKSYIAKMKEKTNPVSDLPSSNESPQEIPQ 1194
Query: 1020 ESSDEETHAPEPESDTDVNQGSSIPFQQQELVVEESAVEKPNITEEISSAIHEEGDDGWQ 1079
E+ DEETH P +T SS Q Q+ +VEE+A +K I E+ I EGDDGWQ
Sbjct: 1195 EAIDEETHMPIASQET-----SSTQVQFQQPIVEETADKKSGIVSEVLPEILAEGDDGWQ 1249
Query: 1080 PVQRLRSAGSYGRRLKQRRATIGKVHSYQKRNADAVIDYSSAKSSHHSSRYYLLKKRAVS 1139
PVQR RSAGSYGRRLKQRR I KV YQK+ DA +DY K++H ++RYYLLKKR +S
Sbjct: 1250 PVQRPRSAGSYGRRLKQRRGIISKV--YQKKIVDANMDYPPVKNTHQNNRYYLLKKRPLS 1307
Query: 1140 HGSSADHHPVTTFHGTKFGRRVVKAVAYRVKSMPSSAKTGTVEASINGSEPSSSPSESRP 1199
HGS DHH GTKFGRR+VKAV YRVKS+PS KT E S +G + SS ES
Sbjct: 1308 HGSYVDHHASNPSQGTKFGRRIVKAVTYRVKSIPSVNKTAPTENSKSGVKTFSS-LESAQ 1366
Query: 1200 ASAPNDTSSVKNSIISLGKSPSYKEVAVAPPGTIAMLQVRVPQSDNPDNQEFSFGKPEDG 1259
SA +D VK+S++SLGKSPSYKEVA+APPGTIA QV +PQ+DN DN++ G ++
Sbjct: 1367 LSASSDAGQVKSSVVSLGKSPSYKEVALAPPGTIAKFQVWLPQNDNSDNKDIGVGGSKEE 1426
Query: 1260 TMEEKENVNTNVTG-AEKTNEEKSDSVLDATDNLKEETGVHPNREETHISDGLEDNPSVV 1318
T+E EN + VT A+K N S D+ D+LK+ T V +E++ ++ E+N +V
Sbjct: 1427 TIEAIENASEVVTVLADKDNS----SATDSNDHLKDVTDVIEEKEDSQSNNAKEENALMV 1482
Query: 1319 VSESERGVGSVVDIHKVVQDGILINGIPNSIDSPTSE-FYEKDSSESIESHDNTKSTLQV 1377
++ +V++H V+Q+ I I+ IPNSID P+ E +EKDS+ E N+ T
Sbjct: 1483 ARKTIESESGIVEVHGVMQNSISIDRIPNSIDFPSKEPPFEKDSAGEFEPQCNSNPTSPE 1542
Query: 1378 VDDLKEKPSVFNPGDTRGLPNRKLSASAVPFNPSPAVARASAVAINMTLPPGPGAVTAVA 1437
V+DL+++ + G+TRGLPN+KLSASA PFNPSP++ARA+ V++N++LPPGPG+V AVA
Sbjct: 1543 VEDLRDRSLATSSGETRGLPNKKLSASAAPFNPSPSIARAAPVSMNISLPPGPGSVPAVA 1602
Query: 1438 PWPVNMTLHPRPATVLPTVNPMCSSPHQPYPSPPSTPNMMQPLPFMYPPYTQPQGVPTST 1497
PWPVNMTLHP PATVLP V+PM S H PYPSPP+TPNMMQPLPF+YPPY+Q Q VPTST
Sbjct: 1603 PWPVNMTLHPGPATVLPPVSPMPSP-HHPYPSPPATPNMMQPLPFIYPPYSQSQAVPTST 1661
Query: 1498 FPVTTSAFHHNHFSWQCNGNSNVPEFIPGPFLPGYHPMEFSVPPPVVEPILDPIMQPKAQ 1557
FPVT++AFH NHFSWQCN N V EFIP PG H MEFSV PPV EPI D ++PK Q
Sbjct: 1662 FPVTSNAFHPNHFSWQCNVNHRVNEFIPSTIWPGCHGMEFSVLPPVTEPIPDSALEPKVQ 1721
Query: 1558 SGDLDSSCSASILPENIDAVGDAEKEVDLLASKSMDNANEVAGIGRETVRGEFVKENGHL 1617
+ S+ +LP +I V +A++EV+LLA ++ DNAN++AG VR E VKENGH
Sbjct: 1722 FENPGSASPPPVLPADIVNVEEAKREVNLLAPEATDNANDLAG-----VRLENVKENGHS 1776
Query: 1618 NLCGTENAGSEPVHFTSQNQSLRRNVEREIEGEKTFSILVRGRRNRKQTLRIPISLLSRP 1677
NL E +G++ H+ S + ER+I+GEKTFSIL+RGRRNRKQTLR+PISLL+RP
Sbjct: 1777 NLGEVEISGNDSSHYKSFKKDGSNTDERKIDGEKTFSILIRGRRNRKQTLRMPISLLNRP 1836
Query: 1678 YGSQSFKVIYNRVIRGSEAPKSFSFSSTGDSTATAV 1713
YGSQSFKVIYNRV+RGSEAPKS F S D TA+A
Sbjct: 1837 YGSQSFKVIYNRVVRGSEAPKSTCFPSAKDCTASAT 1872
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489732|ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356520282|ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808136 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356560227|ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|449487415|ref|XP_004157615.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229361 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449445826|ref|XP_004140673.1| PREDICTED: uncharacterized protein LOC101210514 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|334182214|ref|NP_001184884.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332189151|gb|AEE27272.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|42561588|ref|NP_171639.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332189150|gb|AEE27271.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297842986|ref|XP_002889374.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335216|gb|EFH65633.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|297745448|emb|CBI40528.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1713 | ||||||
| TAIR|locus:2035327 | 1797 | AT1G01320 [Arabidopsis thalian | 0.799 | 0.762 | 0.615 | 0.0 | |
| TAIR|locus:2037783 | 1608 | AT1G15290 [Arabidopsis thalian | 0.387 | 0.412 | 0.583 | 7.9e-300 | |
| DICTYBASE|DDB_G0292806 | 1320 | cluA "CluA protein" [Dictyoste | 0.354 | 0.459 | 0.261 | 6.3e-51 | |
| UNIPROTKB|B4P6P7 | 1451 | clu "Protein clueless" [Drosop | 0.242 | 0.286 | 0.264 | 3e-44 | |
| UNIPROTKB|B4MY63 | 1441 | clu "Protein clueless" [Drosop | 0.194 | 0.231 | 0.286 | 3.7e-44 | |
| UNIPROTKB|B4KT50 | 1487 | clu "Protein clueless" [Drosop | 0.216 | 0.249 | 0.274 | 2.2e-43 | |
| UNIPROTKB|B4JW99 | 1494 | clu "Protein clueless" [Drosop | 0.217 | 0.248 | 0.268 | 2.8e-43 | |
| UNIPROTKB|B3MIW0 | 1450 | clu "Protein clueless" [Drosop | 0.233 | 0.275 | 0.258 | 5.3e-43 | |
| UNIPROTKB|B4GAM1 | 1435 | clu "Protein clueless" [Drosop | 0.194 | 0.232 | 0.280 | 1.2e-42 | |
| FB|FBgn0034087 | 1448 | clu "clueless" [Drosophila mel | 0.194 | 0.230 | 0.275 | 2.5e-42 |
| TAIR|locus:2035327 AT1G01320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4236 (1496.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 889/1444 (61%), Positives = 1063/1444 (73%)
Query: 2 SHAFPKLSSFYEFFSLSHLTPPLQFIRKAPKRRVEEISPDDHLLSLDVKLCNGKMVNVEA 61
SH+FPKL SFYEFFSL+HLTPPLQ+IR A KR E+I+ +DHLLS+DVKLCNGK+V++E
Sbjct: 168 SHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRETEDIAKEDHLLSIDVKLCNGKLVHIEG 227
Query: 62 CRKGFYSVGKQRILCHNIVDLLGQLSRAFDNAYNELMNAFSERNKFGNLPYGFRANTWLI 121
CRKGFYS+GKQRI+CHN+VDLL Q+SRAFDNAY++L+ AFSERNKFGNLPYGFRANTWLI
Sbjct: 228 CRKGFYSIGKQRIICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLI 287
Query: 122 PPIAAQSPSVFPPLPAEDEAWXXXXXXXXXXXKSDLIPWANEFLFVASMPCKTAEERQIR 181
PP AAQSP+ FPPLP EDE W DL+PW+NEF F+ASMPCKTAEERQ+R
Sbjct: 288 PPTAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDLVPWSNEFAFIASMPCKTAEERQVR 347
Query: 182 DRKAFLLHNLFVDVAIFRAIKAVHHVMGKPELIYPSNCKILYTEIIGGLRIAIMKDASNA 241
DRK FLLHNLFVDVA FRAIKAV VM +P L + ++LY+E + L + + +D SNA
Sbjct: 348 DRKVFLLHNLFVDVATFRAIKAVQKVMAEPVLA-EEDSEVLYSETVRDLTVTVTRDTSNA 406
Query: 242 CCKVDTKIDGSQATGVDKNNLVERNLLKGITADENTAAHDVATLGVVNVRYCGYIAVVKV 301
KVDTKIDG QATG+DK L+ERNLLKG+TADENTAAHDVATLG ++++YCGYIAVVK+
Sbjct: 407 SSKVDTKIDGIQATGLDKKKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYIAVVKL 466
Query: 302 QERENKKVGPLFQSIEL-EQPEGGANALNINSLRLLIHETTTLEDNKPAPNLQNLEREEL 360
E+E++++ P Q ++L EQPEGGANALNINSLR L+H+++ E NK P + +EL
Sbjct: 467 -EKESEELSPPSQIVDLLEQPEGGANALNINSLRFLLHKSSP-EQNKKTPQQHD---DEL 521
Query: 361 NASQMFVERLLEESIAKLEEEKPEREHFVRWELGACWIQHLQDQXXXXXXXXXXXXXXXX 420
+S+ FV ++LEESIAKLE E+ +R+ +RWELGACWIQHLQDQ
Sbjct: 522 TSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKSKN 581
Query: 421 XXXXXXXXXMKVEGLGTPLKSLKNNRKKSEGSNHKIHSETLKSQADGVNGESEKATSASI 480
+KVEGLG PLKSL +++KK++ S+ K L SQ D V+ E++ T+AS+
Sbjct: 582 E--------LKVEGLGKPLKSLNSSKKKTDVSSPKTPQTALSSQVDAVSSEAD--TAASL 631
Query: 481 EARLESRDKENELALKNLLSDEAFARLKESETGLHCKSLEELIDLSHNYYVEVALPKLVT 540
++ E +EN L LKNLLSD AF RLKES+TGLH KSL+EL+DL+ NYY EVA+PKLV
Sbjct: 632 QSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHKSLQELVDLAQNYYTEVAIPKLVA 691
Query: 541 DFGSLELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHIIQ 600
DFGSLELSPVDGRTLTDFMHTRGL+MRSLG+VVKLS+KLSHVQSLC+HEMIVRA KHI+Q
Sbjct: 692 DFGSLELSPVDGRTLTDFMHTRGLRMRSLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQ 751
Query: 601 AVISAVG-NTQRMAVSIAAALNLMLGVHESDGLNKSH--NVHPLVWRWLELFLMKRYEWD 657
AVISAV +T ++A+ +AAALN+MLG+ E+ + NVHPL++RWLE FL KRY++D
Sbjct: 752 AVISAVATDTDKIAIKVAAALNMMLGIPENVAATPHNPWNVHPLIFRWLEKFLKKRYDYD 811
Query: 658 LNGLNFKDVRKFAILRGLCHKVGIELVSRDFDMDSPSPFRKIDVVSLVPVHK-------- 709
LN ++KD+RKFAILRGLCHKVGIEL+ RDFDMDSP+PFRK DVVSLVPVHK
Sbjct: 812 LNAFSYKDLRKFAILRGLCHKVGIELIPRDFDMDSPAPFRKTDVVSLVPVHKTFYFKSMQ 871
Query: 710 QAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVV 769
QAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVV
Sbjct: 872 QAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVV 931
Query: 770 LYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRAL 829
LYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRAL
Sbjct: 932 LYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRAL 991
Query: 830 YLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASY 889
YLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASY
Sbjct: 992 YLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASY 1051
Query: 890 HAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAAR 949
HAIAIALSLMEAY LSVQHEQTTL+ILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAAR
Sbjct: 1052 HAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAAR 1111
Query: 950 NGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQDN---N 1006
NGT KPDASIASKGHLSVSDLLDYINPSH+ KG+ KRK Y+ K+K Q N +
Sbjct: 1112 NGTPKPDASIASKGHLSVSDLLDYINPSHNAKGKESVAAKRKNYILKLKEKSKQSNVSEH 1171
Query: 1007 LTS-PDGSSKEVLRESSDEETHAPEPESDTDVNQGSSIPFQQQEL--VVEESAVEKPN-I 1062
L P KE+ E + EET + E +S + ++ P ++ V+E++ ++ N I
Sbjct: 1172 LVEIPREKQKEMSEEDT-EETGSEEGKSSEENHETILAPVEEPPSPPVIEDATMDNSNPI 1230
Query: 1063 TE-EISSAI-HEEG-DDGWQPVQRLRSAGSYGRRLKQRRATIGKVHSYQKRNADAVIDY- 1118
T ++S+ H +G +DGWQPVQR RSAGSYGRR+KQRRA+IGKV++YQK+N +A ID
Sbjct: 1231 TSSDVSTEPQHPDGSEDGWQPVQRPRSAGSYGRRMKQRRASIGKVYTYQKKNVEADIDNP 1290
Query: 1119 XXXXXXXXXXRYYLLKKRAVSHGSSADHH-PVTTFHGTKFGXXXXXXXXXXXXS-MPSS- 1175
+YY+LKKR S+ S ADHH P T GTKFG S PSS
Sbjct: 1291 LFQNATQQNDKYYILKKRTASYSSYADHHSPGLTTQGTKFGRKIVKTLAYRVKSTQPSSG 1350
Query: 1176 -AKTGTVEASINGXXXXXXXXX--XXXXXXXNDTSSVKNSIISLGKSPSYKEVAVAPPGT 1232
AKT + +G ++ KNS++SLGKSPSYKEVA+APPG+
Sbjct: 1351 NAKTAGETSEEDGLKTDASSVEPPTLSSTVQSEAYHTKNSVVSLGKSPSYKEVALAPPGS 1410
Query: 1233 IAMLQVRVPQSDNPDNQEFSFGKPEDGTMEEKENVNTNVTGAEKTNEEKSDSVLDATDNL 1292
IA QV VPQ++ D QE D ME+K T++ E T +E+ + L+ + +
Sbjct: 1411 IAKYQVWVPQAEVSDKQE-------DDEMEKKTEQGTSM---ELTRDEQMITGLE--EEV 1458
Query: 1293 KEETGVHPNREETHISDGLEDNPXXXXXXXXXXXXXXXDIHKVVQDGILINGIPNSIDSP 1352
K+E P E++I+ G E+ I++ + G GI +
Sbjct: 1459 KKEISADP---ESNITQGEEE--IKVELQPSEGVLGGSHINENDESG---GGIQVE-EQV 1509
Query: 1353 TSEFYEKDSSESIESHDNTKSTLQVV---DDLKEKPSVF--NPGD-TRGL-PNRKLSASA 1405
E ++ I S + Q+ +DLK K S+ + GD +RGL PN+KLSASA
Sbjct: 1510 EVELINDGVTDMIHSTREQQVIDQLAADSEDLKAKLSISTTDSGDASRGLLPNKKLSASA 1569
Query: 1406 VPFN 1409
PFN
Sbjct: 1570 APFN 1573
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| TAIR|locus:2037783 AT1G15290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0292806 cluA "CluA protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4P6P7 clu "Protein clueless" [Drosophila yakuba (taxid:7245)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4MY63 clu "Protein clueless" [Drosophila willistoni (taxid:7260)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4KT50 clu "Protein clueless" [Drosophila mojavensis (taxid:7230)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4JW99 clu "Protein clueless" [Drosophila grimshawi (taxid:7222)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B3MIW0 clu "Protein clueless" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4GAM1 clu "Protein clueless" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0034087 clu "clueless" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00027051001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (1918 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1713 | |||
| pfam12807 | 169 | pfam12807, eIF3_p135, Translation initiation facto | 1e-43 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 4e-14 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 2e-12 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 3e-11 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 4e-10 | |
| pfam13374 | 42 | pfam13374, TPR_10, Tetratricopeptide repeat | 1e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 3e-07 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 3e-07 | |
| pfam13424 | 78 | pfam13424, TPR_12, Tetratricopeptide repeat | 7e-07 | |
| pfam13374 | 42 | pfam13374, TPR_10, Tetratricopeptide repeat | 2e-06 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 3e-06 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 1e-05 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 1e-05 | |
| pfam13908 | 177 | pfam13908, Shisa, Wnt and FGF inhibitory regulator | 3e-05 | |
| PRK10263 | 1355 | PRK10263, PRK10263, DNA translocase FtsK; Provisio | 3e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 5e-04 | |
| TIGR02521 | 234 | TIGR02521, type_IV_pilW, type IV pilus biogenesis/ | 0.002 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.002 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 0.004 |
| >gnl|CDD|221783 pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-43
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 22/170 (12%)
Query: 543 GSLELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSEK-LSHVQSLCIHEMIVRAFKHIIQA 601
SLELSP+DG++LT+ +H RG+ MR LG V KL+ K L H++ LC+ EMI RA KHI++
Sbjct: 1 ISLELSPMDGQSLTELLHRRGINMRYLGKVAKLASKRLPHLKRLCVSEMIARAAKHILRT 60
Query: 602 VISAVGNTQRMAVSIAAALNLMLGVH-ESDGLNKSHNVHPL----------------VWR 644
+ V ++ +I+ LN +LG D + +W
Sbjct: 61 YLRGV-PAPDLSAAISHFLNCLLGSESNPDPEAEIDESRSASYPEDDFAWEKLTPEELWS 119
Query: 645 WLELFLMKRYEWDLNGLNF---KDVRKFAILRGLCHKVGIELVSRDFDMD 691
+E R+ ++L ++K ++LR +C KVGI+L+ R++D D
Sbjct: 120 EIEKEAKDRFRYELKEDWKDEQYGLQKISLLREICLKVGIQLLLREYDFD 169
|
Translation initiation factor eIF3 is a multi-subunit protein complex required for initiation of protein biosynthesis in eukaryotic cells. The complex promotes ribosome dissociation, the binding of the initiator methionyl-tRNA to the 40 S ribosomal subunit, and mRNA recruitment to the ribosome. The protein product from TIF31 genes in yeast is p135 which associates with the eIF3 but does not seem to be necessary for protein translation initiation. Length = 169 |
| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
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| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
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| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
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| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|205553 pfam13374, TPR_10, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|205602 pfam13424, TPR_12, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205553 pfam13374, TPR_10, Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|222449 pfam13908, Shisa, Wnt and FGF inhibitory regulator | Back alignment and domain information |
|---|
| >gnl|CDD|236669 PRK10263, PRK10263, DNA translocase FtsK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
| >gnl|CDD|131573 TIGR02521, type_IV_pilW, type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1713 | |||
| KOG1839 | 1236 | consensus Uncharacterized protein CLU1/cluA/TIF31 | 100.0 | |
| KOG1839 | 1236 | consensus Uncharacterized protein CLU1/cluA/TIF31 | 100.0 | |
| PF13236 | 221 | CLU: Clustered mitochondria | 100.0 | |
| PF12807 | 169 | eIF3_p135: Translation initiation factor eIF3 subu | 99.97 | |
| KOG1840 | 508 | consensus Kinesin light chain [Cytoskeleton] | 99.93 | |
| KOG1840 | 508 | consensus Kinesin light chain [Cytoskeleton] | 99.87 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.82 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.8 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.67 | |
| KOG1130 | 639 | consensus Predicted G-alpha GTPase interaction pro | 99.65 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.58 | |
| KOG1130 | 639 | consensus Predicted G-alpha GTPase interaction pro | 99.57 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.5 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.5 | |
| PRK11788 | 389 | tetratricopeptide repeat protein; Provisional | 99.45 | |
| PRK11788 | 389 | tetratricopeptide repeat protein; Provisional | 99.42 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.4 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.39 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.36 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.36 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.36 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.34 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.34 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 99.34 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.33 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.28 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 99.27 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.26 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.25 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.25 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.25 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.24 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.24 | |
| PRK04841 | 903 | transcriptional regulator MalT; Provisional | 99.22 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.21 | |
| PF05303 | 108 | DUF727: Protein of unknown function (DUF727); Inte | 99.21 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 99.2 | |
| KOG2003 | 840 | consensus TPR repeat-containing protein [General f | 99.2 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.2 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.18 | |
| KOG2003 | 840 | consensus TPR repeat-containing protein [General f | 99.16 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 99.12 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.11 | |
| KOG1941 | 518 | consensus Acetylcholine receptor-associated protei | 99.08 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.07 | |
| KOG1129 | 478 | consensus TPR repeat-containing protein [General f | 99.06 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.05 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.04 | |
| KOG1941 | 518 | consensus Acetylcholine receptor-associated protei | 99.02 | |
| PF14938 | 282 | SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 | 99.02 | |
| cd05804 | 355 | StaR_like StaR_like; a well-conserved protein foun | 99.01 | |
| PF14938 | 282 | SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 | 99.01 | |
| PRK04841 | 903 | transcriptional regulator MalT; Provisional | 98.97 | |
| PF13424 | 78 | TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 | 98.96 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 98.96 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 98.96 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 98.96 | |
| PF13424 | 78 | TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 | 98.95 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 98.94 | |
| KOG1129 | 478 | consensus TPR repeat-containing protein [General f | 98.91 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 98.88 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.86 | |
| COG2956 | 389 | Predicted N-acetylglucosaminyl transferase [Carboh | 98.86 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 98.84 | |
| cd05804 | 355 | StaR_like StaR_like; a well-conserved protein foun | 98.84 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 98.83 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 98.82 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.79 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 98.76 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 98.76 | |
| TIGR00540 | 409 | hemY_coli hemY protein. This is an uncharacterized | 98.75 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.73 | |
| TIGR00540 | 409 | hemY_coli hemY protein. This is an uncharacterized | 98.72 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 98.72 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 98.68 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 98.68 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 98.66 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 98.65 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 98.65 | |
| COG2956 | 389 | Predicted N-acetylglucosaminyl transferase [Carboh | 98.65 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 98.65 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 98.63 | |
| PF13525 | 203 | YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M | 98.63 | |
| KOG1174 | 564 | consensus Anaphase-promoting complex (APC), subuni | 98.62 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 98.59 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 98.58 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 98.57 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 98.55 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 98.54 | |
| PRK10866 | 243 | outer membrane biogenesis protein BamD; Provisiona | 98.54 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 98.54 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 98.53 | |
| PF12569 | 517 | NARP1: NMDA receptor-regulated protein 1 ; InterPr | 98.51 | |
| PLN02789 | 320 | farnesyltranstransferase | 98.5 | |
| PRK14574 | 822 | hmsH outer membrane protein; Provisional | 98.5 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 98.49 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 98.44 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 98.43 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 98.42 | |
| PF09976 | 145 | TPR_21: Tetratricopeptide repeat; InterPro: IPR018 | 98.41 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 98.4 | |
| KOG1156 | 700 | consensus N-terminal acetyltransferase [Chromatin | 98.4 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 98.38 | |
| PRK14720 | 906 | transcript cleavage factor/unknown domain fusion p | 98.38 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 98.36 | |
| PRK14720 | 906 | transcript cleavage factor/unknown domain fusion p | 98.36 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 98.36 | |
| KOG0495 | 913 | consensus HAT repeat protein [RNA processing and m | 98.35 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 98.35 | |
| PRK14574 | 822 | hmsH outer membrane protein; Provisional | 98.34 | |
| KOG1128 | 777 | consensus Uncharacterized conserved protein, conta | 98.3 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 98.3 | |
| KOG1585 | 308 | consensus Protein required for fusion of vesicles | 98.29 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 98.28 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 98.27 | |
| PF09976 | 145 | TPR_21: Tetratricopeptide repeat; InterPro: IPR018 | 98.26 | |
| KOG2376 | 652 | consensus Signal recognition particle, subunit Srp | 98.24 | |
| KOG1174 | 564 | consensus Anaphase-promoting complex (APC), subuni | 98.21 | |
| KOG2376 | 652 | consensus Signal recognition particle, subunit Srp | 98.21 | |
| PLN02789 | 320 | farnesyltranstransferase | 98.2 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 98.2 | |
| PRK10866 | 243 | outer membrane biogenesis protein BamD; Provisiona | 98.19 | |
| KOG1127 | 1238 | consensus TPR repeat-containing protein [RNA proce | 98.17 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 98.17 | |
| PF13525 | 203 | YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M | 98.16 | |
| COG4783 | 484 | Putative Zn-dependent protease, contains TPR repea | 98.14 | |
| COG4783 | 484 | Putative Zn-dependent protease, contains TPR repea | 98.13 | |
| KOG1585 | 308 | consensus Protein required for fusion of vesicles | 98.13 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 98.13 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 98.13 | |
| PRK10153 | 517 | DNA-binding transcriptional activator CadC; Provis | 98.1 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 98.05 | |
| PLN03077 | 857 | Protein ECB2; Provisional | 98.04 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 98.03 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 98.03 | |
| KOG3617 | 1416 | consensus WD40 and TPR repeat-containing protein [ | 98.0 | |
| PF12688 | 120 | TPR_5: Tetratrico peptide repeat | 97.99 | |
| KOG0495 | 913 | consensus HAT repeat protein [RNA processing and m | 97.99 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 97.97 | |
| KOG3617 | 1416 | consensus WD40 and TPR repeat-containing protein [ | 97.97 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 97.96 | |
| KOG1127 | 1238 | consensus TPR repeat-containing protein [RNA proce | 97.96 | |
| PLN03077 | 857 | Protein ECB2; Provisional | 97.95 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 97.95 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 97.92 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 97.91 | |
| PRK11906 | 458 | transcriptional regulator; Provisional | 97.89 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 97.89 | |
| KOG1128 | 777 | consensus Uncharacterized conserved protein, conta | 97.87 | |
| KOG2047 | 835 | consensus mRNA splicing factor [RNA processing and | 97.86 | |
| KOG4340 | 459 | consensus Uncharacterized conserved protein [Funct | 97.83 | |
| PF12688 | 120 | TPR_5: Tetratrico peptide repeat | 97.83 | |
| COG0457 | 291 | NrfG FOG: TPR repeat [General function prediction | 97.81 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 97.78 | |
| KOG3060 | 289 | consensus Uncharacterized conserved protein [Funct | 97.78 | |
| PRK10153 | 517 | DNA-binding transcriptional activator CadC; Provis | 97.77 | |
| KOG2300 | 629 | consensus Uncharacterized conserved protein [Funct | 97.76 | |
| COG3071 | 400 | HemY Uncharacterized enzyme of heme biosynthesis [ | 97.74 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 97.69 | |
| KOG3060 | 289 | consensus Uncharacterized conserved protein [Funct | 97.66 | |
| KOG1156 | 700 | consensus N-terminal acetyltransferase [Chromatin | 97.65 | |
| KOG3785 | 557 | consensus Uncharacterized conserved protein [Funct | 97.63 | |
| COG4785 | 297 | NlpI Lipoprotein NlpI, contains TPR repeats [Gener | 97.62 | |
| COG4105 | 254 | ComL DNA uptake lipoprotein [General function pred | 97.61 | |
| PF12569 | 517 | NARP1: NMDA receptor-regulated protein 1 ; InterPr | 97.59 | |
| COG1729 | 262 | Uncharacterized protein conserved in bacteria [Fun | 97.58 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 97.57 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 97.53 | |
| PF08631 | 278 | SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: | 97.5 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 97.46 | |
| KOG2300 | 629 | consensus Uncharacterized conserved protein [Funct | 97.46 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 97.45 | |
| KOG1070 | 1710 | consensus rRNA processing protein Rrp5 [RNA proces | 97.45 | |
| KOG3616 | 1636 | consensus Selective LIM binding factor [Transcript | 97.44 | |
| COG3071 | 400 | HemY Uncharacterized enzyme of heme biosynthesis [ | 97.4 | |
| KOG1586 | 288 | consensus Protein required for fusion of vesicles | 97.39 | |
| KOG3785 | 557 | consensus Uncharacterized conserved protein [Funct | 97.39 | |
| COG2909 | 894 | MalT ATP-dependent transcriptional regulator [Tran | 97.39 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 97.35 | |
| PF13374 | 42 | TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT | 97.35 | |
| KOG1586 | 288 | consensus Protein required for fusion of vesicles | 97.35 | |
| PF09295 | 395 | ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter | 97.33 | |
| PF09295 | 395 | ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter | 97.32 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 97.31 | |
| COG1729 | 262 | Uncharacterized protein conserved in bacteria [Fun | 97.3 | |
| PRK11906 | 458 | transcriptional regulator; Provisional | 97.29 | |
| COG2909 | 894 | MalT ATP-dependent transcriptional regulator [Tran | 97.29 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 97.28 | |
| PF13374 | 42 | TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT | 97.27 | |
| COG0457 | 291 | NrfG FOG: TPR repeat [General function prediction | 97.26 | |
| PF04733 | 290 | Coatomer_E: Coatomer epsilon subunit; InterPro: IP | 97.19 | |
| COG4785 | 297 | NlpI Lipoprotein NlpI, contains TPR repeats [Gener | 97.13 | |
| COG4700 | 251 | Uncharacterized protein conserved in bacteria cont | 97.11 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 97.07 | |
| COG5159 | 421 | RPN6 26S proteasome regulatory complex component [ | 97.06 | |
| KOG2047 | 835 | consensus mRNA splicing factor [RNA processing and | 97.04 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 97.02 | |
| PF10345 | 608 | Cohesin_load: Cohesin loading factor; InterPro: IP | 97.01 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 97.0 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 96.99 | |
| KOG1070 | 1710 | consensus rRNA processing protein Rrp5 [RNA proces | 96.92 | |
| KOG3616 | 1636 | consensus Selective LIM binding factor [Transcript | 96.9 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 96.9 | |
| KOG4340 | 459 | consensus Uncharacterized conserved protein [Funct | 96.88 | |
| PF10300 | 468 | DUF3808: Protein of unknown function (DUF3808); In | 96.88 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 96.87 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 96.86 | |
| PF12968 | 144 | DUF3856: Domain of Unknown Function (DUF3856); Int | 96.8 | |
| PF04184 | 539 | ST7: ST7 protein; InterPro: IPR007311 The ST7 (for | 96.77 | |
| PF12968 | 144 | DUF3856: Domain of Unknown Function (DUF3856); Int | 96.77 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 96.71 | |
| PF10345 | 608 | Cohesin_load: Cohesin loading factor; InterPro: IP | 96.69 | |
| KOG2471 | 696 | consensus TPR repeat-containing protein [General f | 96.69 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 96.67 | |
| PF09986 | 214 | DUF2225: Uncharacterized protein conserved in bact | 96.62 | |
| COG4105 | 254 | ComL DNA uptake lipoprotein [General function pred | 96.6 | |
| PF09986 | 214 | DUF2225: Uncharacterized protein conserved in bact | 96.57 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 96.55 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 96.49 | |
| PF13281 | 374 | DUF4071: Domain of unknown function (DUF4071) | 96.43 | |
| KOG1463 | 411 | consensus 26S proteasome regulatory complex, subun | 96.42 | |
| PF14559 | 68 | TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN | 96.41 | |
| PF14559 | 68 | TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN | 96.36 | |
| PF10300 | 468 | DUF3808: Protein of unknown function (DUF3808); In | 96.35 | |
| COG4700 | 251 | Uncharacterized protein conserved in bacteria cont | 96.14 | |
| KOG2796 | 366 | consensus Uncharacterized conserved protein [Funct | 96.12 | |
| PF03704 | 146 | BTAD: Bacterial transcriptional activator domain; | 96.05 | |
| PF04733 | 290 | Coatomer_E: Coatomer epsilon subunit; InterPro: IP | 95.99 | |
| KOG2610 | 491 | consensus Uncharacterized conserved protein [Funct | 95.88 | |
| KOG1915 | 677 | consensus Cell cycle control protein (crooked neck | 95.87 | |
| PF10602 | 177 | RPN7: 26S proteasome subunit RPN7; InterPro: IPR01 | 95.85 | |
| COG3898 | 531 | Uncharacterized membrane-bound protein [Function u | 95.83 | |
| KOG3081 | 299 | consensus Vesicle coat complex COPI, epsilon subun | 95.77 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 95.75 | |
| KOG2041 | 1189 | consensus WD40 repeat protein [General function pr | 95.73 | |
| KOG2796 | 366 | consensus Uncharacterized conserved protein [Funct | 95.68 | |
| PF10602 | 177 | RPN7: 26S proteasome subunit RPN7; InterPro: IPR01 | 95.61 | |
| PF03704 | 146 | BTAD: Bacterial transcriptional activator domain; | 95.58 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 95.56 | |
| KOG2471 | 696 | consensus TPR repeat-containing protein [General f | 95.53 | |
| PF04184 | 539 | ST7: ST7 protein; InterPro: IPR007311 The ST7 (for | 95.48 | |
| KOG3965 | 160 | consensus Uncharacterized conserved protein [Funct | 95.37 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 95.34 | |
| KOG3081 | 299 | consensus Vesicle coat complex COPI, epsilon subun | 95.25 | |
| COG2976 | 207 | Uncharacterized protein conserved in bacteria [Fun | 95.01 | |
| PF12862 | 94 | Apc5: Anaphase-promoting complex subunit 5 | 94.91 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 94.84 | |
| PF12862 | 94 | Apc5: Anaphase-promoting complex subunit 5 | 94.82 | |
| KOG1464 | 440 | consensus COP9 signalosome, subunit CSN2 [Posttran | 94.79 | |
| KOG2610 | 491 | consensus Uncharacterized conserved protein [Funct | 94.68 | |
| KOG1915 | 677 | consensus Cell cycle control protein (crooked neck | 94.66 | |
| COG2976 | 207 | Uncharacterized protein conserved in bacteria [Fun | 94.63 | |
| KOG1464 | 440 | consensus COP9 signalosome, subunit CSN2 [Posttran | 94.58 | |
| COG3118 | 304 | Thioredoxin domain-containing protein [Posttransla | 94.57 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 94.57 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 94.54 | |
| PF08631 | 278 | SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: | 94.33 | |
| PF13176 | 36 | TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ | 94.25 | |
| PF13176 | 36 | TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ | 93.99 | |
| PF04910 | 360 | Tcf25: Transcriptional repressor TCF25; InterPro: | 93.98 | |
| PF00515 | 34 | TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 | 93.95 | |
| PF05843 | 280 | Suf: Suppressor of forked protein (Suf); InterPro: | 93.93 | |
| PF00515 | 34 | TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 | 93.91 | |
| PF06552 | 186 | TOM20_plant: Plant specific mitochondrial import r | 93.9 | |
| PF11817 | 247 | Foie-gras_1: Foie gras liver health family 1; Inte | 93.77 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 93.6 | |
| COG0790 | 292 | FOG: TPR repeat, SEL1 subfamily [General function | 93.38 | |
| PF07719 | 34 | TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 | 93.25 | |
| COG5159 | 421 | RPN6 26S proteasome regulatory complex component [ | 93.23 | |
| KOG0985 | 1666 | consensus Vesicle coat protein clathrin, heavy cha | 92.63 | |
| PF13428 | 44 | TPR_14: Tetratricopeptide repeat | 92.26 | |
| PF08626 | 1185 | TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC | 92.22 | |
| KOG4322 | 482 | consensus Anaphase-promoting complex (APC), subuni | 92.15 | |
| PF07719 | 34 | TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 | 92.09 | |
| PF13181 | 34 | TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ | 91.91 | |
| KOG2053 | 932 | consensus Mitochondrial inheritance and actin cyto | 91.9 | |
| PF13431 | 34 | TPR_17: Tetratricopeptide repeat | 91.89 | |
| KOG2041 | 1189 | consensus WD40 repeat protein [General function pr | 91.85 | |
| KOG1550 | 552 | consensus Extracellular protein SEL-1 and related | 91.76 | |
| PF13181 | 34 | TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ | 91.59 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 91.58 | |
| PF12739 | 414 | TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex | 91.54 | |
| KOG1550 | 552 | consensus Extracellular protein SEL-1 and related | 91.41 | |
| PF13281 | 374 | DUF4071: Domain of unknown function (DUF4071) | 91.21 | |
| PF13428 | 44 | TPR_14: Tetratricopeptide repeat | 91.19 | |
| PF06552 | 186 | TOM20_plant: Plant specific mitochondrial import r | 91.18 | |
| COG0790 | 292 | FOG: TPR repeat, SEL1 subfamily [General function | 91.16 | |
| KOG1463 | 411 | consensus 26S proteasome regulatory complex, subun | 91.09 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 91.04 | |
| PF13431 | 34 | TPR_17: Tetratricopeptide repeat | 90.76 | |
| KOG2581 | 493 | consensus 26S proteasome regulatory complex, subun | 90.7 | |
| PF12739 | 414 | TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex | 90.61 | |
| KOG4814 | 872 | consensus Uncharacterized conserved protein [Funct | 90.34 | |
| COG3118 | 304 | Thioredoxin domain-containing protein [Posttransla | 90.29 | |
| PF04910 | 360 | Tcf25: Transcriptional repressor TCF25; InterPro: | 90.08 | |
| KOG2053 | 932 | consensus Mitochondrial inheritance and actin cyto | 89.66 | |
| PF05843 | 280 | Suf: Suppressor of forked protein (Suf); InterPro: | 89.6 | |
| KOG4563 | 400 | consensus Cell cycle-regulated histone H1-binding | 89.26 | |
| PF11817 | 247 | Foie-gras_1: Foie gras liver health family 1; Inte | 88.8 | |
| KOG1914 | 656 | consensus mRNA cleavage and polyadenylation factor | 88.58 | |
| KOG2561 | 568 | consensus Adaptor protein NUB1, contains UBA domai | 88.42 | |
| KOG4322 | 482 | consensus Anaphase-promoting complex (APC), subuni | 88.27 | |
| PF08626 | 1185 | TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC | 88.2 | |
| KOG4014 | 248 | consensus Uncharacterized conserved protein (conta | 88.09 | |
| PF10579 | 80 | Rapsyn_N: Rapsyn N-terminal myristoylation and lin | 88.01 | |
| KOG4014 | 248 | consensus Uncharacterized conserved protein (conta | 87.95 | |
| smart00101 | 244 | 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat | 87.82 | |
| PF08424 | 321 | NRDE-2: NRDE-2, necessary for RNA interference; In | 87.57 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 87.32 | |
| PF11207 | 203 | DUF2989: Protein of unknown function (DUF2989); In | 87.0 | |
| PF10579 | 80 | Rapsyn_N: Rapsyn N-terminal myristoylation and lin | 87.0 | |
| KOG0307 | 1049 | consensus Vesicle coat complex COPII, subunit SEC3 | 86.94 | |
| KOG0985 | 1666 | consensus Vesicle coat protein clathrin, heavy cha | 86.23 | |
| COG3898 | 531 | Uncharacterized membrane-bound protein [Function u | 85.99 | |
| PF08424 | 321 | NRDE-2: NRDE-2, necessary for RNA interference; In | 85.69 | |
| PF04781 | 111 | DUF627: Protein of unknown function (DUF627); Inte | 85.64 | |
| PF00244 | 236 | 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 | 85.57 | |
| PF07145 | 18 | PAM2: Ataxin-2 C-terminal region; InterPro: IPR009 | 85.51 | |
| KOG3783 | 546 | consensus Uncharacterized conserved protein [Funct | 85.46 | |
| PF09670 | 379 | Cas_Cas02710: CRISPR-associated protein (Cas_Cas02 | 85.13 | |
| KOG2581 | 493 | consensus 26S proteasome regulatory complex, subun | 84.7 | |
| KOG4814 | 872 | consensus Uncharacterized conserved protein [Funct | 84.47 | |
| KOG0890 | 2382 | consensus Protein kinase of the PI-3 kinase family | 84.36 | |
| PF15015 | 569 | NYD-SP12_N: Spermatogenesis-associated, N-terminal | 84.27 | |
| KOG1920 | 1265 | consensus IkappaB kinase complex, IKAP component [ | 83.75 | |
| KOG0686 | 466 | consensus COP9 signalosome, subunit CSN1 [Posttran | 83.01 | |
| KOG3783 | 546 | consensus Uncharacterized conserved protein [Funct | 81.7 | |
| PF10516 | 38 | SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetrat | 81.64 | |
| COG5187 | 412 | RPN7 26S proteasome regulatory complex component, | 81.53 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 81.48 | |
| KOG0687 | 393 | consensus 26S proteasome regulatory complex, subun | 81.35 | |
| PF13174 | 33 | TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ | 81.35 | |
| PF10516 | 38 | SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetrat | 80.92 | |
| KOG2114 | 933 | consensus Vacuolar assembly/sorting protein PEP5/V | 80.66 | |
| PF10952 | 140 | DUF2753: Protein of unknown function (DUF2753); In | 80.44 | |
| PF04781 | 111 | DUF627: Protein of unknown function (DUF627); Inte | 80.33 | |
| KOG1914 | 656 | consensus mRNA cleavage and polyadenylation factor | 80.3 | |
| KOG1538 | 1081 | consensus Uncharacterized conserved protein WDR10, | 80.04 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 80.03 |
| >KOG1839 consensus Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-106 Score=1025.21 Aligned_cols=868 Identities=24% Similarity=0.324 Sum_probs=718.0
Q ss_pred CCCCccccccccccccCCCChhhhhcccccccccCCCCCceEEEEEEEeCCCEEEEEEeccceeecCC-----------C
Q 000292 4 AFPKLSSFYEFFSLSHLTPPLQFIRKAPKRRVEEISPDDHLLSLDVKLCNGKMVNVEACRKGFYSVGK-----------Q 72 (1713)
Q Consensus 4 ~~~~l~~~~~~~s~s~~~pP~~~~r~~~~~~~~~~~~~gdl~yL~v~t~eg~~~~Ita~~~GFyvn~~-----------~ 72 (1713)
+.|+-..||+.++||.|||||.++|+ +||||||+|+|+||++||||||++|||||++ .
T Consensus 187 ~~~~~~~~~~~La~sp~nppp~~~~~-----------~g~l~yL~v~t~e~~~~~it~~~~gfyvNns~~~~fdP~p~~~ 255 (1236)
T KOG1839|consen 187 SGPKWAKCFRVLAFSPCNPPPERRVL-----------DGDLFYLHVVTLEGSVFHITAIIKGFYVNNSQSSKFDPSPSGS 255 (1236)
T ss_pred CCcccchHHHHHhcCCCCCCCcceee-----------cccEEEEEEEEeeccEEEEEEeeeeEEEeccccCCCCCCCCCC
Confidence 44688899999999999999999999 9999999999999999999999999999964 3
Q ss_pred CcccchHHHHHhhhcHHHHHHHHHHHHHhhccCCCccCCCcccCCccccCCCCCCCCCCCCCCCcccccc--CCCCCCCC
Q 000292 73 RILCHNIVDLLGQLSRAFDNAYNELMNAFSERNKFGNLPYGFRANTWLIPPIAAQSPSVFPPLPAEDEAW--GGNGGGLG 150 (1713)
Q Consensus 73 ~~~~HsL~~LL~~iSp~F~~~f~~l~k~~~~~~~f~~~p~~~~~~~Wlvp~~~~~~~~~~~~l~~Ed~~~--~g~~~gq~ 150 (1713)
+.++|||++||+++||.|+++|...+|+++++|+|||++++|+..+|+|+++.| ..+.+|+|+.+. ..+.+|++
T Consensus 256 ~~ls~sl~~ll~~~S~kfkk~~~~~~~~~s~~~~~er~~~~~~~~sw~~~~~~~----~~d~~r~~~A~~~~~~~~~G~~ 331 (1236)
T KOG1839|consen 256 GDLSHSLIRLLASLSPKFKKAFQTILKKLSSEELAERVLLKTPDESWIVHPLPH----LADAARAEEALTGYYLEHIGYT 331 (1236)
T ss_pred ccchhhHHHHHHhhChHHHHHHHHHHHHHhhhhHHHhccccCCCccccccCCCc----hHHHHhhHHHhccceeccCccc
Confidence 479999999999999999999999999999999999999999999999998876 456789999875 23458888
Q ss_pred CCCCCCCcchHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc-cccCCCC-----CCccccCCceee
Q 000292 151 RDGKSDLIPWANEFLFVASMPCKTAEERQIRDRKAFLLHNLFVDVAIFRAIKAVH-HVMGKPE-----LIYPSNCKILYT 224 (1713)
Q Consensus 151 rD~~~~~rdWNeEfQ~lreLP~~t~~ER~~RdR~~fkl~sdFV~aA~~gA~~VI~-~~m~~~~-----~~~fi~nnIffs 224 (1713)
|| ||||||++||||+++++||++|+|.+||++.||+++|++|||+||+ ++++.+. .+||+||||||+
T Consensus 332 rd-------wNee~Qt~re~~~~~l~dr~~rer~~~Kv~~df~~~a~~Ga~~vi~~ni~ainp~e~~~~qm~i~~nIf~s 404 (1236)
T KOG1839|consen 332 RD-------WNEELQTTREMPHKDLPDRGARERNLNKVRGDFVKAATRGALAVISGNIVAINPEEPTILQMFIWNNIFFS 404 (1236)
T ss_pred cc-------hhhhhhhhhhcCccccchhhhhhhccccchhhhcccccccccccccCccccCCCchHHHHHHHHHhhhhee
Confidence 98 9999999999999999999999999999999999999999999999 6776543 479999999999
Q ss_pred eeccceeEEEecccccccccccccccCcccCCcchhhHhhhhhccccccccccccCCcccccEEEEEecCeEEEEE--E-
Q 000292 225 EIIGGLRIAIMKDASNACCKVDTKIDGSQATGVDKNNLVERNLLKGITADENTAAHDVATLGVVNVRYCGYIAVVK--V- 301 (1713)
Q Consensus 225 ~~vg~~~~~V~rD~~d~~~k~d~~~~G~~~~G~~~a~~A~~n~LkGl~ay~~~~v~gl~tlgtvvVDYrGyRvvAq--v- 301 (1713)
++ ||| +++ |+. .+|+-+|+.|+.+||+|++.|..++++||+||||++||||||||+|| +
T Consensus 405 ~~-----~dv-~~~----y~~--------~g~dvaa~~a~s~dl~g~r~~n~~d~~~l~~Lgt~~vDy~g~rv~Aq~i~~ 466 (1236)
T KOG1839|consen 405 EG-----FDV-RGH----YKL--------GGGDVAAYAAPSTDLNGKRLYNTVDVPGLKTLGTTVVDYRGYRVVAQVIIN 466 (1236)
T ss_pred ee-----ccc-ccc----ccc--------cchhHHhhhhccccccccccccccchhhhcchhheeeeccCceEEEEeecC
Confidence 85 455 444 442 67778899999999999999999999999999999999999999999 6
Q ss_pred ecccccccCC--CccccccccCcCccccc-----------cccccccccccccCCCCCCCCCCCCCcchhhcc--cchhH
Q 000292 302 QERENKKVGP--LFQSIELEQPEGGANAL-----------NINSLRLLIHETTTLEDNKPAPNLQNLEREELN--ASQMF 366 (1713)
Q Consensus 302 pGi~~~~~~~--~~~~i~~~~~egg~~~l-----------~~~~L~ll~H~v~~~~~~~~~~~~~~~d~~~l~--~sR~Y 366 (1713)
|||+++.+.+ +++++++ |+..+ ..+.|.+++|.+.+........++.++++++|. |||+|
T Consensus 467 p~~l~~d~~~~~~~g~~~~-----~K~~~~~e~~~~l~~~~s~~l~i~~h~~i~~~d~~~~eL~~s~eskgi~g~DgR~y 541 (1236)
T KOG1839|consen 467 PGILEGDQSQSVIYGPVDE-----GKELLSEEAYQRLLERASKLLLISPHPVINAKDTVLPELGISFESKGISGVDGRHY 541 (1236)
T ss_pred Ccchhcccccceeeccccc-----cccccccHHHHHhhcccccccccCCccccchhhccccccccccccccccCCCcchh
Confidence 9998766554 3333333 33322 237889999988777655677788899999996 89999
Q ss_pred hHHHHHhhhhhh-----------hccCCcccccccHhHHHHHHHHHHHHHHHHHhHhhhHHHHhhhhhhhhhhhhhhccC
Q 000292 367 VERLLEESIAKL-----------EEEKPEREHFVRWELGACWIQHLQDQKNAEKDKKLSKEKAKKLSNEKAKSEMKVEGL 435 (1713)
Q Consensus 367 vlDl~R~~~~~l-----------~~e~~~~~~~LRpELv~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 435 (1713)
++||+|++|+++ .+.++|+.++|||||+..|++|+..-.....++... +.+.++.... .+....++
T Consensus 542 llDL~~t~Pld~~~L~~~~~~~~~~k~pHkl~~lr~Eli~~f~~~~l~~~i~~~e~~~~--~~~~ds~~~~-~~~d~~~~ 618 (1236)
T KOG1839|consen 542 LLDLMHTRPLDLNFLGVEAVEELAEKYPHKLSLLRPELILKFYEHRLLAFIVAVENAAE--DYGFDSSNPF-KKSDAIGL 618 (1236)
T ss_pred HHHHHhccCCcccccchhhhhhccccCchhhhhcCHHHHHHHHHHHHHHHHHHHhcchh--hccCCccccc-cccchhhH
Confidence 999999988753 246889999999999999998875544332221111 0000000000 00000000
Q ss_pred CCcchhhcccccccCCCCccccccccccccCCccccccCccchhhhhhhhhhhhhH---------HHHHhhcCChHHHhh
Q 000292 436 GTPLKSLKNNRKKSEGSNHKIHSETLKSQADGVNGESEKATSASIEARLESRDKEN---------ELALKNLLSDEAFAR 506 (1713)
Q Consensus 436 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~e~---------~~~~~~~L~~dAF~~ 506 (1713)
. ..+..+..+..++- +.-+. ... ++-+. .....--.+++.|..
T Consensus 619 ~------------------~v~~l~~~is~d~~--eS~~~-------~~~-dav~~~~~al~k~~~~~~~~~fnp~~f~s 670 (1236)
T KOG1839|consen 619 V------------------PVHKLVNCISADGR--ESSKL-------SLD-DAVKYATKALVKLVAVCGPYGFNPAGFYS 670 (1236)
T ss_pred H------------------HHHHHHHhhccccc--ccccc-------chH-HHHHHHHHHHHHHHhhhcccccCcccccc
Confidence 0 00000000000000 00000 000 00000 001112344444443
Q ss_pred h----ccccccccccchHHHHHHHHHHHHHchHHHHHHHhccCCCCCCCcchHHHHHHhcccccchhHHHHHHhh-----
Q 000292 507 L----KESETGLHCKSLEELIDLSHNYYVEVALPKLVTDFGSLELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSE----- 577 (1713)
Q Consensus 507 ~----~~~~~~~~~~~~eelv~~a~~fL~~~~IP~lV~d~~~~~~~P~DG~sLte~lH~rGINmRYLG~Va~l~~----- 577 (1713)
+ -..+.......+++.+.++.+||....||.+++++.++.+.|+||++|+++||..|||+||||+++.++.
T Consensus 671 ~~v~~~~t~~~~~a~~~~qk~~d~~Erll~~~iPd~~Ks~~d~sv~p~dgq~l~~aL~~~g~n~ryLg~~~~~~~~~~~a 750 (1236)
T KOG1839|consen 671 LAVVLYHTEDFNQAAIQQQKVLDINERLLGLDIPDTMKSYGDLSVFPYDGQHLELALHYVGRNLRYLGKTCGLSHPNTAA 750 (1236)
T ss_pred CceEecCccccchhhhhhHhHHHHHHHHhccccchhHHhccccceeeecccHHHHHHHHhhHHHHHhhccccccCccccc
Confidence 1 1111112334557889999999999999999999999999999999999999999999999999998763
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHhhccccCCCCC----------C-----------
Q 000292 578 --KLSHVQSLCIHEMIVRAFKHIIQAVISAVGNTQRMAVSIAAALNLMLGVHESDGLN----------K----------- 634 (1713)
Q Consensus 578 --~L~~i~~l~~~EMIaRA~KhILRa~lr~l~~~~~la~AIahfLNcLLG~~~~~~~~----------~----------- 634 (1713)
.+.++.+|++-|++.|++||+||.++|. .....+..+++|||||+|+..+..... +
T Consensus 751 ~~~~v~l~~l~~~ei~~RslKhvlK~~~r~-l~~~~i~ta~SH~ln~~ls~~~~av~~~~t~~~~~ka~~~~~~~~~~g~ 829 (1236)
T KOG1839|consen 751 TYINVALMELGVGEIALRSLKHVLKDNLRL-LGADHIQTAASHALNCLLSVMEAAVQKEQTTLEILKAKDLRTQDAAAGT 829 (1236)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHhhcccccCCCccchHHHHhhhhhhhhhhccCC
Confidence 2667889999999999999999999998 588899999999999999984432100 0
Q ss_pred -CC---------CCchhHHHHHHHHHHHHhcccccCCChh------hhhHHHHHHHHHHHhhhhhhcccccCCCC---CC
Q 000292 635 -SH---------NVHPLVWRWLELFLMKRYEWDLNGLNFK------DVRKFAILRGLCHKVGIELVSRDFDMDSP---SP 695 (1713)
Q Consensus 635 -~~---------~~~~~lw~~I~~elk~ry~y~L~~~~~~------~l~k~aLLReLc~KlGIqL~~R~Y~fdsa---~~ 695 (1713)
.. -....+|++|+.....+|++........ ...++++.+..|.+.|++...|.|+|+.. ..
T Consensus 830 ~k~~~S~~s~~~l~~s~L~~~I~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~r~~~~e~~~~ks~ 909 (1236)
T KOG1839|consen 830 PKPDASISSKGHLSVSDLLKYITADSKNKFTAAHDVKSRETILLKNGKSKIAVEKLEKKKRELQKPARNYDFESSEPKSE 909 (1236)
T ss_pred CCcccccccccccchhHHHHhccccccccccchhhhhHHHHHhhhcccchhHHHHHHHHhhhcchhhhhccccccCCCCC
Confidence 00 1123599999999998998877654433 35588899999999999999999999984 78
Q ss_pred chHHHHhhhccchhhccCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhcCC
Q 000292 696 FRKIDVVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGD 775 (1713)
Q Consensus 696 F~~eDIlnl~PvvK~~~~~s~~A~~LlelA~~~l~qG~~eeAle~lqeAL~l~eqv~G~dhp~~A~ay~~LA~vy~~lGd 775 (1713)
|...||+++.|++|+..+...++...++.|+..+.+|.+.+|.+ .-+++.++.+++|..|++++.+|..|+.++..+|+
T Consensus 910 f~~~Di~~~~p~ik~s~P~~~~a~~~~e~gq~~~~e~~~~~~~~-~~~slnl~~~v~~~~h~~~~~~~~~La~l~~~~~d 988 (1236)
T KOG1839|consen 910 FNDSDILNLRPVIKHSSPTVSEAKDSPEQGQEALLEDGFSEAYE-LPESLNLLNNVMGVLHPEVASKYRSLAKLSNRLGD 988 (1236)
T ss_pred CCcccccccccccccCCCccchhhhhhhhhhhhhcccchhhhhh-hhhhhhHHHHhhhhcchhHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 000292 776 FNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEE 855 (1713)
Q Consensus 776 ~deAle~~~KAL~I~Er~lG~Dhp~ta~ay~nLA~vy~~lG~~eeALe~yerALeL~~~i~G~dhP~~a~a~~NLA~iy~ 855 (1713)
+++|+.+.++|+.+.+|.+|.|++.++..|.+|+.+++..++...|+..+.+|++++...+|++||..+.+..|++.++.
T Consensus 989 ~~~Ai~~~~ka~ii~eR~~g~ds~~t~~~y~nlal~~f~~~~~~~al~~~~ra~~l~~Ls~ge~hP~~a~~~~nle~l~~ 1068 (1236)
T KOG1839|consen 989 NQEAIAQQRKACIISERVLGKDSPNTKLAYGNLALYEFAVKNLSGALKSLNRALKLKLLSSGEDHPPTALSFINLELLLL 1068 (1236)
T ss_pred hHHHHHhcccceeeechhccCCCHHHHHHhhHHHHHHHhccCccchhhhHHHHHHhhccccCCCCCchhhhhhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 000292 856 GLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLE 935 (1713)
Q Consensus 856 ~lG~~eeAle~lekALei~ek~~G~d~~~tA~a~~nLA~ay~~lGd~eeAle~lekALeI~kk~LG~dh~~t~ea~~~La 935 (1713)
..++++.|+++++.|+++..+++|+.+..++.+++.+|+++..++++..|+.+.+.++.|++.++|++|.++.++..|+.
T Consensus 1069 ~v~e~d~al~~le~A~a~~~~v~g~~~l~~~~~~~~~a~l~~s~~dfr~al~~ek~t~~iy~~qlg~~hsrt~~S~~~~~ 1148 (1236)
T KOG1839|consen 1069 GVEEADTALRYLESALAKNKKVLGPKELETALSYHALARLFESMKDFRNALEHEKVTYGIYKEQLGPDHSRTKESSEWLN 1148 (1236)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCccchhhhhHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhCCCcccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 000292 936 YFESKAFEQQEAAR 949 (1713)
Q Consensus 936 ~L~qka~e~AeAl~ 949 (1713)
..+..++..++.+.
T Consensus 1149 ~~T~~~v~~Qk~~~ 1162 (1236)
T KOG1839|consen 1149 LSTAIAVKIQKKLL 1162 (1236)
T ss_pred HhhHHHHHHHHHHH
Confidence 88887777766554
|
|
| >KOG1839 consensus Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 [General function prediction only] | Back alignment and domain information |
|---|
| >PF13236 CLU: Clustered mitochondria | Back alignment and domain information |
|---|
| >PF12807 eIF3_p135: Translation initiation factor eIF3 subunit 135 | Back alignment and domain information |
|---|
| >KOG1840 consensus Kinesin light chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1840 consensus Kinesin light chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
| >KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
| >KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11788 tetratricopeptide repeat protein; Provisional | Back alignment and domain information |
|---|
| >PRK11788 tetratricopeptide repeat protein; Provisional | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
| >PRK04841 transcriptional regulator MalT; Provisional | Back alignment and domain information |
|---|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
| >PF05303 DUF727: Protein of unknown function (DUF727); InterPro: IPR007967 This family consists of several uncharacterised eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2003 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2003 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
| >KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1129 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
| >KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] | Back alignment and domain information |
|---|
| >PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A | Back alignment and domain information |
|---|
| >cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals | Back alignment and domain information |
|---|
| >PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A | Back alignment and domain information |
|---|
| >PRK04841 transcriptional regulator MalT; Provisional | Back alignment and domain information |
|---|
| >PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H | Back alignment and domain information |
|---|
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H | Back alignment and domain information |
|---|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
| >KOG1129 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals | Back alignment and domain information |
|---|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
| >TIGR00540 hemY_coli hemY protein | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >TIGR00540 hemY_coli hemY protein | Back alignment and domain information |
|---|
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
| >COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A | Back alignment and domain information |
|---|
| >KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK10866 outer membrane biogenesis protein BamD; Provisional | Back alignment and domain information |
|---|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
| >PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala | Back alignment and domain information |
|---|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
| >PRK14574 hmsH outer membrane protein; Provisional | Back alignment and domain information |
|---|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function | Back alignment and domain information |
|---|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
| >KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
| >PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
| >KOG0495 consensus HAT repeat protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK14574 hmsH outer membrane protein; Provisional | Back alignment and domain information |
|---|
| >KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
| >KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function | Back alignment and domain information |
|---|
| >KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK10866 outer membrane biogenesis protein BamD; Provisional | Back alignment and domain information |
|---|
| >KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A | Back alignment and domain information |
|---|
| >COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK10153 DNA-binding transcriptional activator CadC; Provisional | Back alignment and domain information |
|---|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
| >PLN03077 Protein ECB2; Provisional | Back alignment and domain information |
|---|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12688 TPR_5: Tetratrico peptide repeat | Back alignment and domain information |
|---|
| >KOG0495 consensus HAT repeat protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
| >KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] | Back alignment and domain information |
|---|
| >PLN03077 Protein ECB2; Provisional | Back alignment and domain information |
|---|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
| >PRK11906 transcriptional regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
| >KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2047 consensus mRNA splicing factor [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4340 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12688 TPR_5: Tetratrico peptide repeat | Back alignment and domain information |
|---|
| >COG0457 NrfG FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
| >KOG3060 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK10153 DNA-binding transcriptional activator CadC; Provisional | Back alignment and domain information |
|---|
| >KOG2300 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3060 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG3785 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >COG4105 ComL DNA uptake lipoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala | Back alignment and domain information |
|---|
| >COG1729 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
| >PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] | Back alignment and domain information |
|---|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2300 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
| >KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG3616 consensus Selective LIM binding factor [Transcription] | Back alignment and domain information |
|---|
| >COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG3785 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG2909 MalT ATP-dependent transcriptional regulator [Transcription] | Back alignment and domain information |
|---|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
| >PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A | Back alignment and domain information |
|---|
| >KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi | Back alignment and domain information |
|---|
| >PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi | Back alignment and domain information |
|---|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
| >COG1729 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK11906 transcriptional regulator; Provisional | Back alignment and domain information |
|---|
| >COG2909 MalT ATP-dependent transcriptional regulator [Transcription] | Back alignment and domain information |
|---|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A | Back alignment and domain information |
|---|
| >COG0457 NrfG FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
| >COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
| >COG5159 RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2047 consensus mRNA splicing factor [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF10345 Cohesin_load: Cohesin loading factor; InterPro: IPR019440 Cohesin loading factor is a conserved protein that has been characterised in fungi | Back alignment and domain information |
|---|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG3616 consensus Selective LIM binding factor [Transcription] | Back alignment and domain information |
|---|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4340 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans | Back alignment and domain information |
|---|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12968 DUF3856: Domain of Unknown Function (DUF3856); InterPro: IPR024552 This domain of unknown function is found in a small group of tetratricopeptide-like proteins, which includes the uncharacterised protein Q8KAL8 from SWISSPROT | Back alignment and domain information |
|---|
| >PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene | Back alignment and domain information |
|---|
| >PF12968 DUF3856: Domain of Unknown Function (DUF3856); InterPro: IPR024552 This domain of unknown function is found in a small group of tetratricopeptide-like proteins, which includes the uncharacterised protein Q8KAL8 from SWISSPROT | Back alignment and domain information |
|---|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF10345 Cohesin_load: Cohesin loading factor; InterPro: IPR019440 Cohesin loading factor is a conserved protein that has been characterised in fungi | Back alignment and domain information |
|---|
| >KOG2471 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function | Back alignment and domain information |
|---|
| >COG4105 ComL DNA uptake lipoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function | Back alignment and domain information |
|---|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
| >PF13281 DUF4071: Domain of unknown function (DUF4071) | Back alignment and domain information |
|---|
| >KOG1463 consensus 26S proteasome regulatory complex, subunit RPN6/PSMD11 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A | Back alignment and domain information |
|---|
| >PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A | Back alignment and domain information |
|---|
| >PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans | Back alignment and domain information |
|---|
| >COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] | Back alignment and domain information |
|---|
| >KOG2796 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production | Back alignment and domain information |
|---|
| >PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2610 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10602 RPN7: 26S proteasome subunit RPN7; InterPro: IPR019585 This entry represents the regulatory subunit RPN7 (known as the non-ATPase regulatory subunit 6 in higher eukaryotes) of the 26S proteasome | Back alignment and domain information |
|---|
| >COG3898 Uncharacterized membrane-bound protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2041 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2796 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10602 RPN7: 26S proteasome subunit RPN7; InterPro: IPR019585 This entry represents the regulatory subunit RPN7 (known as the non-ATPase regulatory subunit 6 in higher eukaryotes) of the 26S proteasome | Back alignment and domain information |
|---|
| >PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG2471 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene | Back alignment and domain information |
|---|
| >KOG3965 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG2976 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF12862 Apc5: Anaphase-promoting complex subunit 5 | Back alignment and domain information |
|---|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12862 Apc5: Anaphase-promoting complex subunit 5 | Back alignment and domain information |
|---|
| >KOG1464 consensus COP9 signalosome, subunit CSN2 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2610 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG2976 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG1464 consensus COP9 signalosome, subunit CSN2 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] | Back alignment and domain information |
|---|
| >PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A | Back alignment and domain information |
|---|
| >PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A | Back alignment and domain information |
|---|
| >PF04910 Tcf25: Transcriptional repressor TCF25; InterPro: IPR006994 This entry appears to represent a novel family of basic helix-loop-helix (bHLH) proteins that control differentiation and development of a variety of organs [, ] | Back alignment and domain information |
|---|
| >PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins | Back alignment and domain information |
|---|
| >PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins | Back alignment and domain information |
|---|
| >PF11817 Foie-gras_1: Foie gras liver health family 1; InterPro: IPR021773 Mutating the gene foie gras in zebrafish has been shown to affect development; the mutants develop large, lipid-filled hepatocytes in the liver, resembling those in individuals with fatty liver disease [] | Back alignment and domain information |
|---|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] | Back alignment and domain information |
|---|
| >PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >COG5159 RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13428 TPR_14: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway | Back alignment and domain information |
|---|
| >KOG4322 consensus Anaphase-promoting complex (APC), subunit 5 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A | Back alignment and domain information |
|---|
| >KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13431 TPR_17: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >KOG2041 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1550 consensus Extracellular protein SEL-1 and related proteins [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A | Back alignment and domain information |
|---|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12739 TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex 85 kDa subunit; InterPro: IPR024420 This entry represents Trs85, a subunit of the TRAPP III complex [] | Back alignment and domain information |
|---|
| >KOG1550 consensus Extracellular protein SEL-1 and related proteins [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13281 DUF4071: Domain of unknown function (DUF4071) | Back alignment and domain information |
|---|
| >PF13428 TPR_14: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins | Back alignment and domain information |
|---|
| >COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1463 consensus 26S proteasome regulatory complex, subunit RPN6/PSMD11 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
| >PF13431 TPR_17: Tetratricopeptide repeat | Back alignment and domain information |
|---|
| >KOG2581 consensus 26S proteasome regulatory complex, subunit RPN3/PSMD3 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12739 TRAPPC-Trs85: ER-Golgi trafficking TRAPP I complex 85 kDa subunit; InterPro: IPR024420 This entry represents Trs85, a subunit of the TRAPP III complex [] | Back alignment and domain information |
|---|
| >KOG4814 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04910 Tcf25: Transcriptional repressor TCF25; InterPro: IPR006994 This entry appears to represent a novel family of basic helix-loop-helix (bHLH) proteins that control differentiation and development of a variety of organs [, ] | Back alignment and domain information |
|---|
| >KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins | Back alignment and domain information |
|---|
| >KOG4563 consensus Cell cycle-regulated histone H1-binding protein [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF11817 Foie-gras_1: Foie gras liver health family 1; InterPro: IPR021773 Mutating the gene foie gras in zebrafish has been shown to affect development; the mutants develop large, lipid-filled hepatocytes in the liver, resembling those in individuals with fatty liver disease [] | Back alignment and domain information |
|---|
| >KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2561 consensus Adaptor protein NUB1, contains UBA domain [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4322 consensus Anaphase-promoting complex (APC), subunit 5 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway | Back alignment and domain information |
|---|
| >KOG4014 consensus Uncharacterized conserved protein (contains TPR repeat) [Function unknown] | Back alignment and domain information |
|---|
| >PF10579 Rapsyn_N: Rapsyn N-terminal myristoylation and linker region; InterPro: IPR019568 Neuromuscular junction formation relies upon the clustering of acetylcholine receptors and other proteins in the muscle membrane | Back alignment and domain information |
|---|
| >KOG4014 consensus Uncharacterized conserved protein (contains TPR repeat) [Function unknown] | Back alignment and domain information |
|---|
| >smart00101 14_3_3 14-3-3 homologues | Back alignment and domain information |
|---|
| >PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
| >PF11207 DUF2989: Protein of unknown function (DUF2989); InterPro: IPR021372 Some members in this bacterial family of proteins are annotated as lipoproteins however this cannot be confirmed | Back alignment and domain information |
|---|
| >PF10579 Rapsyn_N: Rapsyn N-terminal myristoylation and linker region; InterPro: IPR019568 Neuromuscular junction formation relies upon the clustering of acetylcholine receptors and other proteins in the muscle membrane | Back alignment and domain information |
|---|
| >KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG3898 Uncharacterized membrane-bound protein [Function unknown] | Back alignment and domain information |
|---|
| >PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] | Back alignment and domain information |
|---|
| >PF07145 PAM2: Ataxin-2 C-terminal region; InterPro: IPR009818 This entry represents a conserved region approximately 250 residues long located towards the C terminus of eukaryotic ataxin-2 | Back alignment and domain information |
|---|
| >KOG3783 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09670 Cas_Cas02710: CRISPR-associated protein (Cas_Cas02710) | Back alignment and domain information |
|---|
| >KOG2581 consensus 26S proteasome regulatory complex, subunit RPN3/PSMD3 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4814 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15015 NYD-SP12_N: Spermatogenesis-associated, N-terminal | Back alignment and domain information |
|---|
| >KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
| >KOG0686 consensus COP9 signalosome, subunit CSN1 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3783 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >COG5187 RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0687 consensus 26S proteasome regulatory complex, subunit RPN7/PSMD6 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A | Back alignment and domain information |
|---|
| >PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ] | Back alignment and domain information |
|---|
| >KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10952 DUF2753: Protein of unknown function (DUF2753); InterPro: IPR020206 This entry represents a group of uncharacterised proteins | Back alignment and domain information |
|---|
| >PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1713 | ||||
| 3nf1_A | 311 | Crystal Structure Of The Tpr Domain Of Kinesin Ligh | 5e-10 | ||
| 3nf1_A | 311 | Crystal Structure Of The Tpr Domain Of Kinesin Ligh | 4e-09 | ||
| 3ceq_A | 283 | The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc | 1e-08 | ||
| 3ceq_A | 283 | The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc | 6e-06 | ||
| 3edt_B | 283 | Crystal Structure Of The Mutated S328n Hklc2 Tpr Do | 2e-08 | ||
| 3edt_B | 283 | Crystal Structure Of The Mutated S328n Hklc2 Tpr Do | 4e-06 | ||
| 2fo7_A | 136 | Crystal Structure Of An 8 Repeat Consensus Tpr Supe | 3e-04 | ||
| 2fo7_A | 136 | Crystal Structure Of An 8 Repeat Consensus Tpr Supe | 9e-04 | ||
| 2wqh_A | 125 | Crystal Structure Of Ctpr3y3 Length = 125 | 4e-04 |
| >pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain 1 Length = 311 | Back alignment and structure |
|
| >pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain 1 Length = 311 | Back alignment and structure |
| >pdb|3CEQ|A Chain A, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2) Length = 283 | Back alignment and structure |
| >pdb|3CEQ|A Chain A, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2) Length = 283 | Back alignment and structure |
| >pdb|3EDT|B Chain B, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain Length = 283 | Back alignment and structure |
| >pdb|3EDT|B Chain B, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain Length = 283 | Back alignment and structure |
| >pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) Length = 136 | Back alignment and structure |
| >pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) Length = 136 | Back alignment and structure |
| >pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3 Length = 125 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 2e-38
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 3/220 (1%)
Query: 730 DKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDI 789
+G+ E AV +AL L G H A ++LA+V + A AL I
Sbjct: 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAI 98
Query: 790 NERELGLDHPDTMKSYGDLAVFYYRL-QHTELALKYVKRALYLLHLTCGPSHPNTAATYI 848
E+ LG DHP + +LAV Y + ++ E A KRAL + G HP+ A
Sbjct: 99 REKTLGKDHPAVAATLNNLAVLYGKRGKYKE-AEPLCKRALEIREKVLGKDHPDVAKQLN 157
Query: 849 NVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQH 908
N+A++ + G Y +AL+ Q LGPD A + + +A + +
Sbjct: 158 NLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETL 217
Query: 909 EQTTLQILRAK-LGPDDLRTQDAAAWLEYFESKAFEQQEA 947
+ L + G D + E E +Q++
Sbjct: 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDG 257
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Length = 283 | Back alignment and structure |
|---|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} Length = 203 | Back alignment and structure |
|---|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} Length = 203 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Length = 406 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Length = 338 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Length = 411 | Back alignment and structure |
|---|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Length = 378 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Length = 383 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307 | Back alignment and structure |
|---|
| >3tax_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; thiocarbamate crosslink, covalent inhibitor, gylcosyltransfe inhibitor, O-GLCNAC transferase; HET: UDP; 1.88A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* Length = 723 | Back alignment and structure |
|---|
| >3tax_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; thiocarbamate crosslink, covalent inhibitor, gylcosyltransfe inhibitor, O-GLCNAC transferase; HET: UDP; 1.88A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* Length = 723 | Back alignment and structure |
|---|
| >3tax_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; thiocarbamate crosslink, covalent inhibitor, gylcosyltransfe inhibitor, O-GLCNAC transferase; HET: UDP; 1.88A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* Length = 723 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 | Back alignment and structure |
|---|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} Length = 208 | Back alignment and structure |
|---|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} Length = 208 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Length = 272 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Length = 252 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} Length = 225 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568 | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568 | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568 | Back alignment and structure |
|---|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Length = 243 | Back alignment and structure |
|---|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Length = 243 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 | Back alignment and structure |
|---|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} Length = 177 | Back alignment and structure |
|---|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} Length = 117 | Back alignment and structure |
|---|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} Length = 117 | Back alignment and structure |
|---|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Length = 136 | Back alignment and structure |
|---|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >3v6t_A DHAX3; tandem repeats, DNA specific binding protein, DNA binding DNA complex; HET: DNA; 1.85A {Xanthomonas} PDB: 3v6p_A 2kq5_A Length = 499 | Back alignment and structure |
|---|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Length = 293 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A Length = 186 | Back alignment and structure |
|---|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* Length = 213 | Back alignment and structure |
|---|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 Length = 292 | Back alignment and structure |
|---|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Length = 275 | Back alignment and structure |
|---|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Length = 275 | Back alignment and structure |
|---|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 Length = 275 | Back alignment and structure |
|---|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 Length = 121 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Length = 217 | Back alignment and structure |
|---|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A Length = 125 | Back alignment and structure |
|---|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A Length = 125 | Back alignment and structure |
|---|
| >3ugm_A TAL effector avrbs3/PTHA; TAL effector; 3.00A {Xanthomonas oryzae} Length = 1047 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Length = 474 | Back alignment and structure |
|---|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A Length = 372 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1713 | ||||
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 6e-12 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 2e-08 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 6e-06 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 2e-05 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 4e-05 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 0.001 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 5e-10 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 2e-09 | |
| d1hz4a_ | 366 | a.118.8.2 (A:) Transcription factor MalT domain II | 4e-09 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 5e-06 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 7e-06 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 3e-04 | |
| d1fcha_ | 323 | a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting | 5e-04 | |
| d1zbpa1 | 264 | e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {V | 7e-06 | |
| d1qqea_ | 290 | a.118.8.1 (A:) Vesicular transport protein sec17 { | 8e-06 | |
| d1ya0a1 | 497 | a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [T | 3e-04 | |
| d1sgoa_ | 139 | d.82.3.1 (A:) Hypothetical protein c14orf129, hspc | 7e-04 | |
| d1tjca_ | 95 | a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subuni | 0.001 |
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.4 bits (163), Expect = 6e-12
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 32/172 (18%)
Query: 729 LDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALD 788
++G ++ A+ +A+ AY LA L G +A AL
Sbjct: 248 YEQGLIDLAIDTYRRAIE--------LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 299
Query: 789 INERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYI 848
P S +LA + E A++ ++AL + P AA +
Sbjct: 300 --------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHS 343
Query: 849 NVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLME 900
N+A + + G + AL + +A++ + P A +Y + L M+
Sbjct: 344 NLASVLQQQGKLQEALMHYKEAIRIS-----PTF---ADAYSNMGNTLKEMQ 387
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Length = 366 | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} Length = 264 | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 290 | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 497 | Back information, alignment and structure |
|---|
| >d1sgoa_ d.82.3.1 (A:) Hypothetical protein c14orf129, hspc210 {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1713 | |||
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 99.69 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.68 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.66 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.62 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.57 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.51 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.51 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.49 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.48 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 99.48 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.4 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.21 | |
| d1sgoa_ | 139 | Hypothetical protein c14orf129, hspc210 {Human (Ho | 99.15 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.14 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.1 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.04 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 98.94 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.93 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.92 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 98.89 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 98.85 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 98.84 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.84 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 98.79 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.79 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 98.77 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.77 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.75 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 98.75 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 98.75 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 98.73 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 98.72 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 98.66 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 98.65 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 98.62 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.55 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.5 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 98.46 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 98.4 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.32 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.26 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.19 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.14 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 98.08 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.03 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 98.02 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.01 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.98 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 97.92 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.86 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 97.82 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 97.72 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 96.94 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 96.62 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 90.59 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 88.62 |
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=1.4e-13 Score=128.56 Aligned_cols=275 Identities=9% Similarity=-0.082 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999991997999999999999998840999733899999999999814999999999999999999950999
Q 000292 718 GRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 797 (1713)
Q Consensus 718 A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~D 797 (1713)
+..+..+|..++.+|++++|+.++++++.+.... .+.+..+.++..++.++...|++..|...+.+++.+.....+..
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~ 128 (366)
T d1hz4a_ 51 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ 128 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 9999999999998799999999999999998750--11489999998887887888889999988999999867503412
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 91149999999999999099699999999999999983499994499999999999998899799999999999998883
Q 000292 798 HPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRL 877 (1713)
Q Consensus 798 hp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei~ek~ 877 (1713)
.......+..+|.++...|+++.|..++.+++...... ........+..++..+...+++..+..++.++..+....
T Consensus 129 ~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~ 205 (366)
T d1hz4a_ 129 LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY---QPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 205 (366)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS---CGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56788899888789998145666689999988876630---024689999888888876466788889999999999873
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 09995779999999999999928918999999999999999619999999999999999999889999999933899952
Q 000292 878 LGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDA 957 (1713)
Q Consensus 878 lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~L~qka~e~AeAl~~~~~~~~~ 957 (1713)
+.........+..++.++...|+++.|..++++++.+. ..+..........++......+...++..........
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 280 (366)
T d1hz4a_ 206 -KYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPE----FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNEN 280 (366)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCC----CTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf -11572699999999999986044898999999999762----2466677788999999998758799999999999988
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 343039962999999999999987997999999999998870103
Q 000292 958 SIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 1002 (1713)
Q Consensus 958 a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~ 1002 (1713)
.............+..+|.+|..+|++++|+.++++++++....+
T Consensus 281 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~~ 325 (366)
T d1hz4a_ 281 ARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTG 325 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 764266747999999999999987899999999999999765318
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sgoa_ d.82.3.1 (A:) Hypothetical protein c14orf129, hspc210 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
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| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
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| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
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| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
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| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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