Citrus Sinensis ID: 000295

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710-

MKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHccHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHHHHccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccc

cccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHcccccccccHHHHHHHHHHHHccccHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHcccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHcccHccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHccccHHHHHHHHHHHHHccccccHHHHcccccHHHHHHHHHHHHHHccccccHHHHHcccEcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccHHHHHcccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHcccccccEEEccccccEEEcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHcccEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHccc

mkelnreeptglggplceryvlDSRGALVERRAVVYRERLILGHCLVLSVLvvrtspkdvKDAFSALKDSAAELSenndtlkhQITFSLLFSLVIAFISDalstvpdkssvlsrdasFRKEFHEIVMatgsdpivegfVGGVRLAWAVHLMLIHDEIaaretvsssssseLSNIRSCLETIFSNNVFQFLLDKALRTaayqnddedmVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIagshdfvhdsnlpsqqdteigplpfVSLLEFVSEIYqkepellsgndvLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQtggallpdfqegDAKALVAYLNVLQKVMENgnsierknwfpdieplfkllsyenvppyLKGALRNAIAACIHVSLVMKDNIWRLLeqydlpvvvgthvgntaqpiagQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEekdvsdrgrrFVGIFRFvydhvfgpfpqrayadpceKWQLVVACLKHFHMILNMYDIQEEDIDNAVeqsstltqsspiqmqLPVLELLKDFMSGKAVFRNIMGilqpgvdsiiternnqiygPLLEKAVQLSLEIVILVFEKDLllsdfwrplyqpvdvilSQDHNQIVALLEYvrydflpqIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIeksgddpgVLIMQLLIdnisrpapniTHLLLKfdldtpiertvlqpkfHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELcldpltcgptmdllsnkKYQFFVKHLdaigvaplpkrnsnqalRISSLHQRAWLLKLLAIELHagygsssthQEACQTILAHLFgrdhiedtdrtlslpFMVQNITehagtrtisKSKVLELLEVVqfrspdtaMKLSQIVSNMKYDLLAEEilgnpttsgkggiyyysergdrlidlsSFSDKLWKKLNIVypqlsnfgseaeLNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDAclgasaspdcsLRMAFILCQVALTCMAKLrdekflcpgglnsdsvTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQhmlapdvpTTVLQYLLLdeqdgedldLQKIDKEQAELTHANFSTLRKEAQAILDLFIKdatqgsepgktlSLYVLDALICIDHEKYFLNQLQSRGFLRSCLmnvsnvsyqdgkRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVglqgslrrvatkprralggdidrqrmiVTPMLRLVFSLTslvdtsdffevKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSkvwpyeesdeygFVQGLFGMMSSLfssdlenltFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSrslddyntnsglqqLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVRedyvsssdnIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFqdssivsasSEAMRTITygaksdsgqdisllsgkliPILERLEllgedkvgrDLKVFRRLVTSLKEMTIQKLAL

mkelnreeptglggplceRYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDAlstvpdkssvlsrDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAaretvsssssSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSStltqsspiqMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITehagtrtiskskVLELLEVVQfrspdtamKLSQIVSNMKYDLLAEeilgnpttsgkGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAvglqgslrrvatkprralggdidrqrmivTPMLRLVFSLTslvdtsdfFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLlnkirdinelsrqevDEVINMCVredyvsssdniQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYgaksdsgqdiSLLSGKLIPILERLellgedkvgrdlKVFRRLVtslkemtiqklal

MKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVssssssELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDrgrrfvgifrfvYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVlqyllldeqdgedldlqKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTleaelalllRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNtnsglqqltltslgsllnsataVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQlitllllltehvlnvilIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

*************GPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSP**********************TLKHQITFSLLFSLVIAFISDALSTVP****VLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAA*************NIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLAR************VLNSYRIAGSHDFV***********EIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDI****************QMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSE**QIIE**GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDG**L***********LTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDL*******************LKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSA****MRTITYGA*****QDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKE********

*K*******************LDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDS*********TLKHQITFSLLFSLVIAFISD****************SFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAA********SSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVL**************************PLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDE**********************ALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLP*********************QFELNEIEARREQYPSTISFLNLLNAL*************FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQ***LTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIIT**********LEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRS*********GDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTP**********HYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAG***********QTILAHLF*********************************KVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWK**********************EAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASA***CSLRMAFILCQVALTCMAKLRDE*******************MVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHM****************************************STLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVS*****************CTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGS************GGDIDRQRMIVTPMLRLVFSLTSLVDT*D***V**KVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENL*****************KKFQLCFSLSSYLYFMVTKKSLRL**********************LGSLLNSATAVLERAAE*******************************************YVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSS**************************LSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKL**

***********LGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAA**************IRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGY********ACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSA********SELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

*********TGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKF******N*DSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAxxxxxxxxxxxxxxxxxxxxxITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLxxxxxxxxxxxxxxxxxxxxxxxxxxxxSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLAL

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1711	2.2.26 [Sep-21-2011]
Q92621		2012	Nuclear pore complex prot	yes	no	0.807	0.686	0.229	6e-51

>sp\|Q92621\|NU205_HUMAN Nuclear pore complex protein Nup205 OS=Homo sapiens GN=NUP205 PE=1 SV=3	Back alignment and function desciption

 Score =  204 bits (518), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 392/1706 (22%), Positives = 696/1706 (40%), Gaps = 324/1706 (18%)

Query: 137  GFVGGVRLAWAVHLMLIH---DEIAARE-TVSSSSSSELSNIRSCLETIFSNNVFQFLLD 192
            G    VRLAWA+ L  I    D  A  E T +  + +EL+          ++NVF FL++
Sbjct: 324  GLQATVRLAWALALRGISQLPDVTALAEFTEADEAMAELA---------IADNVFLFLME 374

Query: 193  KALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSH 252
              + +  +  ++    Y+    +H LIT FL+  L   KVK+ +++A    ++  I  S 
Sbjct: 375  SVVVSEYFYQEE---FYIRR--VHNLITDFLA--LMPMKVKQLRNRADE--DARMIHMSM 425

Query: 253  DFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEP-------------ELLSGNDVLWT 299
               ++  +  ++D E        L+  + E+Y+K P             E L    ++ +
Sbjct: 426  QMGNEPPISLRRDLE-------HLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGS 478

Query: 300  FVVFAGEDHTNFQTL-----------------VAFLKMLSTLASSQEGASKVYELL---- 338
            ++  A +     Q +                 + +LKML  LA+  + A   + LL    
Sbjct: 479  YLGVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNG 538

Query: 339  -------QGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----LPD--FQEGDAKALV 385
                   QG     + W   F  L +Y E  ++ L +  ++    LP     + +   L+
Sbjct: 539  SSHVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLI 598

Query: 386  AYLNVLQKVM---ENGNS--IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHV 440
            A+L +   ++   EN      E   W P +  L  L    ++PP LK  L   +AA    
Sbjct: 599  AFLQLTSTIITWSENARLALCEHPQWTPVVVILGLLQC--SIPPVLKAELLKTLAA-FGK 655

Query: 441  SLVMKDNIWRLLEQYDLPVVVGTHVGNTAQ-PIAGQVYDMQFELNEIEARREQYPSTISF 499
            S  +  ++W+ LE         T +  T + P   Q   ++ ELNEIE+R E+YP T +F
Sbjct: 656  SPEIAASLWQSLEY--------TQILQTVRIPSQRQAIGIEVELNEIESRCEEYPLTRAF 707

Query: 500  LNLLNALIAEEKDVSD-----RGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACL 554
              L++ L+ E    S+     R   F    +F+ D VF  F  RAY    EKW++    L
Sbjct: 708  CQLISTLV-ESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVL 766

Query: 555  KHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGIL 614
            + F+ +L  Y+ Q ED    V+Q   L     I  + P   L+   ++   +    + +L
Sbjct: 767  EVFYKLLRDYEPQLEDF---VDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLL 823

Query: 615  QPGVDSIITERNNQIYGPL-----LEKAVQLSLEIVILVFEKDLLLSDFWR--------- 660
            + GV  + T      Y P      LEKAVQ  L ++ L  +K+ L  D  R         
Sbjct: 824  EEGVKQLDT------YAPFPGKKHLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVC 877

Query: 661  PLYQPVDVI--LSQDHNQIVALLEYVRY-DFLPQIQQCSIKIMSILSSRMVGLVQLLLKY 717
            PL Q +  I   ++  + +V +  Y+ + +  P++   S KI+  +S      ++L+  +
Sbjct: 878  PLEQLLQGINPRTKKADNVVNIARYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDF 937

Query: 718  NAASS----LVEDYAACLE-------LRSEESQIIEKS----GDDPGVLIMQLLIDNISR 762
                S    L+  +  CL+       +R EE   +EK       +  + I+ LLI ++  
Sbjct: 938  THDQSISQKLMAGFVECLDCEDAEEFVRLEEGSELEKKLVAIRHETRIHILNLLITSLEC 997

Query: 763  PAPNITHLLLKFDLDTPIERTVLQ-------PKFHYSCLKIILEILEKVSKPDVNAL--- 812
              PN+   LL F+L  P+  T LQ       P+   +CL  IL ILEK ++     +   
Sbjct: 998  NPPNLALYLLGFELKKPVSTTNLQDPGVLGCPR---TCLHAILNILEKGTEGRTGPVAVR 1054

Query: 813  ----LHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALR 868
                L E  +Q++Y+LC    T GPTM  L   +  F    L  +         SN+   
Sbjct: 1055 ESPQLAELCYQVIYQLCACSDTSGPTMRYLRTSQ-DFLFSQLQYLPF-------SNKEYE 1106

Query: 869  ISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLF-----------GRDHIEDTD 917
            IS L+Q +WL+K  +IEL     +S   Q +    L HL            G   IED +
Sbjct: 1107 ISMLNQMSWLMKTASIELRV---TSLNRQRSHTQRLLHLLLDDMPVKPYSDGEGGIEDEN 1163

Query: 918  RTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLL---- 973
            R++S  F+      H  T T  + K+L +L+ + F          +I   ++ D      
Sbjct: 1164 RSVS-GFL------HFDTATKVRRKILNILDSIDFSQ--------EIPEPLQLDFFDRAQ 1208

Query: 974  AEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVK 1033
             E+++ N          + + RG  + ++      L  ++N     L    +  +   + 
Sbjct: 1209 IEQVIAN--------CEHKNLRGQTVCNVKLLHRVLVAEVNA----LQGMAAIGQRPLLM 1256

Query: 1034 EAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV---SVSRRISALGNRSEILYQIL- 1089
            E I  +L++    NK L+   A+ H L  W Q+VE+   +  + +    +R  I+  IL 
Sbjct: 1257 EEISTVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQ 1316

Query: 1090 ---DACLGASASPDCSLRMA-FILCQVALTCMAKLRDEK-------------FLCPGGLN 1132
               D  L   A+ +    +A  +    A    A L ++K             F+      
Sbjct: 1317 DVHDKILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKETSVLGPAEAHYAFMLDSCFT 1376

Query: 1133 SDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESS-EALRRRQYALLLSYFQYCQHML 1191
            S       ++    + + + + +L KL+  IL+     + +R   Y  LL Y Q  Q   
Sbjct: 1377 SPPPEENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPD 1436

Query: 1192 APDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQG 1251
             PD      + +       ED+   K+ +E       N + +     A++++  +DA  G
Sbjct: 1437 EPDTLEAAKKTMWERLTAPEDV-FSKLQRE-------NIAIIESYGAALMEVVCRDACDG 1488

Query: 1252 SEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDT----- 1306
             E G+ L+L +LD ++ +D ++ +L  L + G+L+     V   S  +  R+L +     
Sbjct: 1489 HEIGRMLALALLDRIVSVDKQQQWLLYLSNSGYLK-----VLVDSLVEDDRTLQSLLTPQ 1543

Query: 1307 ---LQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKP 1363
               L+   T E+++A L R++    + GA  L   G +  +A C+   +     R  T P
Sbjct: 1544 PPLLKALYTYESKMAFLTRVAKI--QQGALELLRSGVIVRLAQCQVYDM-----RPETDP 1596

Query: 1364 RRALG---------GDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKG 1414
            +   G           +DR R I+ P L+L      ++ TS   +   +   +V+ F+  
Sbjct: 1597 QSMFGMRDPPMFIPTPVDRYRQILLPALQLC----QVILTSSMAQ-HLQAAGQVLQFLIS 1651

Query: 1415 HQLLVDQVLQ-ENISEADELTMEQINLVVGILSK-VWP---------------YEESDEY 1457
            H   +  +L+ +++S     +++++ L+ GI+SK   P                E     
Sbjct: 1652 HSDTIQAILRCQDVSAG---SLQELALLTGIISKAALPGILSELDVDVNEGSLMELQGHI 1708

Query: 1458 G-FVQGLFGMMSSLFSSD-LENLTFSQ---SARSLENQRKSELKKFQLCFSLSSYLYFMV 1512
            G F +   G++S    SD L    F         +  + + EL   Q+C ++  Y   ++
Sbjct: 1709 GRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEGDKVSKKDEIELAMQQICANVMEYCQSLM 1768

Query: 1513 TKKSLRLQ-----VSRSLDDYNTNSGLQQLT---------LTSLG---SLLNSATAVLER 1555
             + S   Q      + SL +     G +Q T         L  LG    LL  +      
Sbjct: 1769 LQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQAPVVPYWRLPGLGIIIYLLKQSANDFFS 1828

Query: 1556 AAEEKSLLLNKIRDINELSRQEVDEVIN--MCVREDYVSSSDNIQKRRYV-AMVEMCQVA 1612
              +     ++K++++ +L   E+ E+    M    D +S++     ++YV A   + +V 
Sbjct: 1829 YYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGVDKISTA-----QKYVLARRRLVKVI 1883

Query: 1613 GNRDQLITLLLLLTEHVLNVILIHFQ 1638
             NR +L++L   + E  L ++  H +
Sbjct: 1884 NNRAKLLSLCSFIIETCLFILWRHLE 1909

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1711
297738947		1889	unnamed protein product [Vitis vinifera]	0.998	0.904	0.799	0.0
359484406		1934	PREDICTED: nuclear pore complex protein	0.987	0.873	0.759	0.0
357510427		2047	Nuclear pore complex protein Nup205 [Med	0.993	0.830	0.724	0.0
449493695		1849	PREDICTED: nuclear pore complex protein	0.976	0.903	0.717	0.0
240256431		1838	uncharacterized protein [Arabidopsis tha	0.969	0.902	0.688	0.0
297792433		1808	hypothetical protein ARALYDRAFT_495190 [	0.951	0.900	0.675	0.0
8843857		1837	unnamed protein product [Arabidopsis tha	0.952	0.887	0.665	0.0
356514473		1931	PREDICTED: nuclear pore complex protein	0.817	0.724	0.749	0.0
387169521		1729	hypothetical protein 11M19.28 [Arabidops	0.872	0.863	0.642	0.0
242064430		1850	hypothetical protein SORBIDRAFT_04g00700	0.968	0.895	0.603	0.0

>gi\|297738947\|emb\|CBI28192.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 2817 bits (7302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1371/1715 (79%), Positives = 1515/1715 (88%), Gaps = 6/1715 (0%)

Query: 1    MKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDV 60
            MKELNREEP GLGGP  ERYVLDSRGALVERRAVV+RERLILGHCLVLSVLVVRTSPKDV
Sbjct: 175  MKELNREEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDV 234

Query: 61   KDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRK 120
            KD FS LKD AAEL+ ++DT+K+QITFS+LFSLVIAFISDAL TVPDK+SVL RDA+FR+
Sbjct: 235  KDLFSTLKDCAAELNGSSDTIKYQITFSILFSLVIAFISDALGTVPDKASVLCRDATFRR 294

Query: 121  EFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLET 180
            EF EIV+A+G+DPI EGFV  +RLAWA HLML+ D   A ETVSS+SS++L  I SCLE 
Sbjct: 295  EFQEIVIASGNDPIAEGFVDVIRLAWAAHLMLVQDATVATETVSSASSNDLGYICSCLEV 354

Query: 181  IFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAM 240
            IFSNNVFQFLLDKAL+TAAYQNDDEDM+Y+ NAYLHK+ITCFLSH +ARDKVKE+K+KAM
Sbjct: 355  IFSNNVFQFLLDKALQTAAYQNDDEDMIYVYNAYLHKMITCFLSHPIARDKVKETKEKAM 414

Query: 241  SVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWTF 300
            SVL+ YR+ GSHDF+HD+N  SQ+  E+G  PFVSLLEFVSE+YQKEPELLSGNDVLWTF
Sbjct: 415  SVLSPYRMVGSHDFMHDNNSNSQKAVEMGSQPFVSLLEFVSEVYQKEPELLSGNDVLWTF 474

Query: 301  VVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDE 360
            V FAGEDHTNFQTLVAFLKML TLASSQEGA KV+ELLQGK FRS+GW TLFDCLSIY+E
Sbjct: 475  VNFAGEDHTNFQTLVAFLKMLGTLASSQEGALKVFELLQGKTFRSVGWSTLFDCLSIYEE 534

Query: 361  KFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFPDIEPLFKLLSYE 420
            KFKQ+LQ+ GA+LP+FQEGDAKALVAYLNVLQKVM+NGN +ERKNWFPDIEPLFKLLSYE
Sbjct: 535  KFKQALQSPGAILPEFQEGDAKALVAYLNVLQKVMQNGNPVERKNWFPDIEPLFKLLSYE 594

Query: 421  NVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQ 480
            NVPPYLKGALRNAI   I VS  +KD IW  LEQYDLPVVVG ++GN AQP+A Q+YDM+
Sbjct: 595  NVPPYLKGALRNAITTFIQVSPALKDTIWSYLEQYDLPVVVGPNLGNNAQPMASQIYDMR 654

Query: 481  FELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAY 540
            FELNEIEARREQYPSTISFL LLNALIAEE+DVSDRGRRF+GIFRF+YDHVFGPFPQRAY
Sbjct: 655  FELNEIEARREQYPSTISFLKLLNALIAEERDVSDRGRRFIGIFRFIYDHVFGPFPQRAY 714

Query: 541  ADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQS--STLTQSSPIQMQLPVLELLK 598
            ADPCEKWQLVVACL+HF MIL+MYDI++ DIDNA +Q   S + QS+P+QMQLPV+ELLK
Sbjct: 715  ADPCEKWQLVVACLQHFRMILSMYDIRDGDIDNAGDQPQLSAVAQSAPLQMQLPVVELLK 774

Query: 599  DFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDF 658
            DFMSGK +FRNIMGIL PGV+SII ER NQIYG LLEKAV+LSLEI+ILVFEKD+LLSDF
Sbjct: 775  DFMSGKTIFRNIMGILLPGVNSIINERTNQIYGQLLEKAVELSLEIIILVFEKDVLLSDF 834

Query: 659  WRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVGLVQLLLKYN 718
            WRPLYQP+DVIL+QDHNQIVALLEYVRYDF PQIQ+ SIKIMSI  SRMVGLVQLLLK N
Sbjct: 835  WRPLYQPLDVILAQDHNQIVALLEYVRYDFRPQIQKLSIKIMSIFGSRMVGLVQLLLKSN 894

Query: 719  AASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDT 778
            AAS L+EDYAACLE  S ESQIIE S DD GVLIMQLLIDNISRPAPNITHLLLKFDLDT
Sbjct: 895  AASFLIEDYAACLESVSVESQIIENSNDDLGVLIMQLLIDNISRPAPNITHLLLKFDLDT 954

Query: 779  PIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLL 838
             IERT+LQPKFHYSCLK+IL+IL+K+ KPDVNALLHEFGFQLLYELCLDPLT GPTMDLL
Sbjct: 955  SIERTILQPKFHYSCLKVILDILDKLFKPDVNALLHEFGFQLLYELCLDPLTSGPTMDLL 1014

Query: 839  SNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQE 898
            SNKKYQFFVKHLD IG+APLPKRN NQALRISSLHQRAWLLKLLA+ELHAG   +STH++
Sbjct: 1015 SNKKYQFFVKHLDTIGIAPLPKRNINQALRISSLHQRAWLLKLLAVELHAGDMVNSTHRD 1074

Query: 899  ACQTILAHLFGRDHIE-DTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDT 957
            ACQ+IL H+FG D ++  TD + S  + V N     GTRTISKSKVLELLEVVQFRSPDT
Sbjct: 1075 ACQSILGHIFGPDVVDFTTDHSTSHAYSVHNSAADVGTRTISKSKVLELLEVVQFRSPDT 1134

Query: 958  AMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVY 1017
             MK SQ+VSNMKYDLLAE+ILGNPTTSGK  +YYYSERGDRLIDL++F DKLW+K N + 
Sbjct: 1135 TMKYSQVVSNMKYDLLAEDILGNPTTSGKNNVYYYSERGDRLIDLTTFRDKLWQKCNFMN 1194

Query: 1018 PQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISA 1077
            PQLS FGSE ELNDV+E IQQLLRWGWKYNKNLEEQAAQLHML GWSQVVEVS SRR+S 
Sbjct: 1195 PQLSFFGSEVELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLIGWSQVVEVSASRRLSH 1254

Query: 1078 LGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVT 1137
            L NR+EIL+Q+LDA L ASASPDCSL+MA  LCQVALTCMAKLRDE+FLCPGGLNSDSVT
Sbjct: 1255 LENRAEILFQLLDASLTASASPDCSLKMAVTLCQVALTCMAKLRDERFLCPGGLNSDSVT 1314

Query: 1138 FLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPT 1197
             LD+I VKQLSNGACHS+LFKLI+AILR+ESSEALRRRQYALLLSYFQYC+HML  DVPT
Sbjct: 1315 CLDIITVKQLSNGACHSILFKLIVAILRHESSEALRRRQYALLLSYFQYCRHMLDLDVPT 1374

Query: 1198 TVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKT 1257
             VL+ LLLDE DGEDLDL KIDKEQAEL  ANFS LRKEAQAILDL IKDATQGSE GKT
Sbjct: 1375 AVLR-LLLDEHDGEDLDLLKIDKEQAELAQANFSILRKEAQAILDLVIKDATQGSESGKT 1433

Query: 1258 LSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAEL 1317
            +SLYVLDALICIDHE++FLNQLQSRGFLRSCLMN+SN+S QDG RSLD+LQR CTLEAEL
Sbjct: 1434 ISLYVLDALICIDHERFFLNQLQSRGFLRSCLMNISNISLQDGGRSLDSLQRTCTLEAEL 1493

Query: 1318 ALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQ--GSLRRVATKPRRALGGDIDRQR 1375
            AL+LRISHKYGKSGAQ+LFSMG+LEHIASCK V  Q  GS RR  TK RR    +ID+Q+
Sbjct: 1494 ALVLRISHKYGKSGAQILFSMGALEHIASCKVVNFQMKGSFRRFETKLRRDAAVNIDKQQ 1553

Query: 1376 MIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTM 1435
             I+ P+LRLVFSLTSLVDTSDFFEVKNK+VREV+DF+KGHQLL DQV+QE++ EADELTM
Sbjct: 1554 TIIAPILRLVFSLTSLVDTSDFFEVKNKIVREVIDFVKGHQLLFDQVIQEDVLEADELTM 1613

Query: 1436 EQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLENQRKSEL 1495
            EQINLVVGILSKVWPYEESDEYGFVQGLFGMM SLFS DLE+ T +Q  +SL+ QRKSEL
Sbjct: 1614 EQINLVVGILSKVWPYEESDEYGFVQGLFGMMRSLFSHDLESRTPTQPVQSLDKQRKSEL 1673

Query: 1496 KKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNTNSGLQQLTLTSLGSLLNSATAVLER 1555
              F+LCFSLSSYLYF+VTKKSLRLQV     DY+    LQQ TLT L  LLNS T  LER
Sbjct: 1674 NIFRLCFSLSSYLYFLVTKKSLRLQVLDGPTDYHAPGRLQQPTLTLLVYLLNSVTTALER 1733

Query: 1556 AAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNR 1615
            AAEEKSLLLNKI+DINELSRQEVDE+INMCVR+D VSSSDN Q+RRY+AMVEMCQVAGNR
Sbjct: 1734 AAEEKSLLLNKIQDINELSRQEVDEIINMCVRQDCVSSSDNTQRRRYIAMVEMCQVAGNR 1793

Query: 1616 DQLITLLLLLTEHVLNVILIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLSGKLIPI 1675
            DQLITLLL L EHVLNVILIHFQD SI   +S   + IT+G K D+GQDIS+  GKLIP 
Sbjct: 1794 DQLITLLLPLAEHVLNVILIHFQDGSITPGTSATTKAITFGDKFDNGQDISVFCGKLIPT 1853

Query: 1676 LERLELLGEDKVGRDLKVFRRLVTSLKEMTIQKLA 1710
            LERLELL EDKVG +LKVFRRLV+SLKE+ IQKL 
Sbjct: 1854 LERLELLSEDKVGHNLKVFRRLVSSLKELGIQKLG 1888

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359484406\|ref\|XP_003633105.1\| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357510427\|ref\|XP_003625502.1\| Nuclear pore complex protein Nup205 [Medicago truncatula] gi\|355500517\|gb\|AES81720.1\| Nuclear pore complex protein Nup205 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449493695\|ref\|XP_004159416.1\| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|240256431\|ref\|NP_199933.5\| uncharacterized protein [Arabidopsis thaliana] gi\|332008669\|gb\|AED96052.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297792433\|ref\|XP_002864101.1\| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata] gi\|297309936\|gb\|EFH40360.1\| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|8843857\|dbj\|BAA97383.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356514473\|ref\|XP_003525930.1\| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]	Back alignment and taxonomy information

>gi\|387169521\|gb\|AFJ66182.1\| hypothetical protein 11M19.28 [Arabidopsis halleri]	Back alignment and taxonomy information

>gi\|242064430\|ref\|XP_002453504.1\| hypothetical protein SORBIDRAFT_04g007000 [Sorghum bicolor] gi\|241933335\|gb\|EES06480.1\| hypothetical protein SORBIDRAFT_04g007000 [Sorghum bicolor]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1711
TAIR\|locus:2176197		1838	EMB3142 "EMBRYO DEFECTIVE 3142	0.701	0.653	0.644	0.0
UNIPROTKB\|F1N1V3		2012	NUP205 "Uncharacterized protei	0.406	0.345	0.236	1.6e-42
RGD\|1309413		2008	Nup205 "nucleoporin 205" [Ratt	0.409	0.349	0.228	1.7e-41
UNIPROTKB\|J9P7I1		2012	NUP205 "Uncharacterized protei	0.405	0.344	0.237	2.7e-41
UNIPROTKB\|Q92621		2012	NUP205 "Nuclear pore complex p	0.406	0.345	0.233	2.3e-40
UNIPROTKB\|F1PZ99		1985	NUP205 "Uncharacterized protei	0.396	0.342	0.232	1e-39
UNIPROTKB\|E1BV83		2017	NUP205 "Uncharacterized protei	0.405	0.343	0.217	5.6e-36
ZFIN\|ZDB-GENE-040715-8		2001	nup205 "nucleoporin 205" [Dani	0.216	0.185	0.252	8.1e-35
UNIPROTKB\|I3LC31		727	NUP205 "Uncharacterized protei	0.313	0.738	0.223	4.2e-12
FB\|FBgn0031078		2090	Nup205 "Nucleoporin 205kD" [Dr	0.266	0.218	0.241	2.4e-09

TAIR\|locus:2176197 EMB3142 "EMBRYO DEFECTIVE 3142" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3949 (1395.2 bits), Expect = 0., Sum P(2) = 0.
 Identities = 798/1239 (64%), Positives = 969/1239 (78%)

Query:   473 AGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDXXXXXXXXXXXXYDHVF 532
             + QVYDMQFELNE+EARREQYPSTISFLNL+NALIA EKDV+D                 
Sbjct:   633 SSQVYDMQFELNEVEARREQYPSTISFLNLINALIAGEKDVNDRG--------------- 677

Query:   533 GPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLT--QSSPIQMQ 590
                 +RAY+DPCEKWQLVVACL+HFHMIL+MYDIQEED+D   E    L   ++S +Q Q
Sbjct:   678 ----RRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHPHFLVSLETSSLQTQ 733

Query:   591 LPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFE 650
             LP++ELLKDFMSGKA++RN+MGILQ GV+SII+ER ++ YG +LEKAVQLSLEI++LVFE
Sbjct:   734 LPIIELLKDFMSGKALYRNLMGILQVGVNSIISERLSKTYGKILEKAVQLSLEILLLVFE 793

Query:   651 KDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILS-SRMVG 709
             KDLL+SD WRPLYQP+D+ILSQDHNQI+ALLEYVRYD LPQIQ+ SIKIM+IL  SR+VG
Sbjct:   794 KDLLVSDVWRPLYQPLDIILSQDHNQIIALLEYVRYDSLPQIQRSSIKIMNILRCSRLVG 853

Query:   710 LVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITH 769
             LV +L+K +AA+SL+EDYAACLE R EE +++E S DD GVLIMQLL+DNI+RPAP+ITH
Sbjct:   854 LVPMLIKIDAANSLIEDYAACLEGRLEEGEVVENSCDDLGVLIMQLLVDNINRPAPSITH 913

Query:   770 LLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPL 829
             LLLKFDLD P+E TVLQPKFHYSCLK+ILE+LEK+  PD+N LL EFGFQLL EL LDPL
Sbjct:   914 LLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFEFGFQLLCELNLDPL 973

Query:   830 TCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAG 889
             T GPTMDLLS+KKYQFF++HLD IGVA LPKR+ +QALRISSLHQRAWLLKLLAI LH G
Sbjct:   974 TSGPTMDLLSSKKYQFFLQHLDTIGVATLPKRSGSQALRISSLHQRAWLLKLLAIALHTG 1033

Query:   890 YGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEV 949
              GSSS H EACQ+IL+HLFGR+  E  +   S     Q+  ++AGT +ISKSK L LLE+
Sbjct:  1034 SGSSSAHLEACQSILSHLFGREVTEAANEPFSSSTYPQDGLDYAGTSSISKSKALALLEI 1093

Query:   950 VQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKL 1009
             +QFRSPD +M+L QIVS++KYD L E+ILGN  TS  G IYYYSERGDRLIDLSSFS+KL
Sbjct:  1094 LQFRSPDASMQLPQIVSSLKYDSLVEDILGNRDTSVSGSIYYYSERGDRLIDLSSFSNKL 1153

Query:  1010 WKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV 1069
             W+KL+  +P + +F + AEL++V+E IQQLL+WGWKYN+NLEEQAAQLHML GWSQ+VEV
Sbjct:  1154 WQKLHSGFPLVDSFPNVAELSEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEV 1213

Query:  1070 SVSRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPG 1129
             S  RRIS+L NRSEILY+ILDA L ASASPDCSL+MAF+L QVALTC+AKLRD++F   G
Sbjct:  1214 SACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQG 1273

Query:  1130 GLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQH 1189
              L+SD+VT LDV+MVK LS GACHS+LFKL+MAILR+ESSE+LRRRQYALLLSYFQYCQH
Sbjct:  1274 ALSSDTVTCLDVMMVKHLSTGACHSVLFKLVMAILRHESSESLRRRQYALLLSYFQYCQH 1333

Query:  1190 MLAPDVPTTVXXXXXXXXXXXXXXXXXKIDKEQAELTHANFSTLRKEAQAILDLFIKDAT 1249
             M+A DVPT+V                 KIDKEQA+L  ANF  ++KEAQ ILDL IKDA+
Sbjct:  1334 MIALDVPTSVVQFLLLNEQDGEDLDIQKIDKEQADLARANFFIIKKEAQGILDLVIKDAS 1393

Query:  1250 QGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQR 1309
             QGSE GKT+SLYVL+AL+CIDHE+YFL+QLQSRGF+RSCL ++SN+SYQDG   L++ QR
Sbjct:  1394 QGSEFGKTISLYVLEALVCIDHERYFLSQLQSRGFIRSCLGSISNISYQDGTHLLESQQR 1453

Query:  1310 ACTXXXXXXXXXRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRVATKPRRALGG 1369
             ACT         RISHKYGKSG QVLFSMG+LEHIASC+A+  +G++RRV  K +  +G 
Sbjct:  1454 ACTLEAELALLLRISHKYGKSGGQVLFSMGALEHIASCRAISFKGNMRRVDMKLQSDVGY 1513

Query:  1370 DIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISE 1429
             ++ +QR I+T +LRLVF+LTSLV+TS+FFE +NK+VR+V++FIKGHQ L DQ+L+E+ ++
Sbjct:  1514 NVQKQRTIITAVLRLVFALTSLVETSEFFEGRNKIVRDVVEFIKGHQSLFDQLLREDFTQ 1573

Query:  1430 ADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLTFSQSARSLEN 1489
             AD+L MEQI L VGILSKVWP+EE+D YGFVQGLF MMS LF         +   +S+ +
Sbjct:  1574 ADDLLMEQIILAVGILSKVWPFEENDGYGFVQGLFDMMSKLF--------IASPIKSILS 1625

Query:  1490 QRKSELKKFQLCFSLSSYLYFMVTKKSLRLQVSRSLDDYNXXXXXXXXXXXXXXXXXXXX 1549
             Q  SELK  QL FSL+SYLYF+VTK SLRLQVS   D  +                    
Sbjct:  1626 QG-SELKLSQLRFSLTSYLYFLVTKNSLRLQVSD--DSLDSSTKLRQPTLLLLASLLSHV 1682

Query:  1550 XXVLERAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMC 1609
                LERAAE+KSLLL+KIRDINELSRQ+VD +I +C  ++YV+ SDNI KRRY+AMVEMC
Sbjct:  1683 TDSLERAAEKKSLLLHKIRDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVEMC 1742

Query:  1610 QVAGNRDQXXXXXXXXXXXXXXXXXIHFQDSSIVSASSEAMRTITYGAKSDSGQDISLLS 1669
             Q+ GNRDQ                 IH QD S+  +S+E     +YG+KS   Q+++ L 
Sbjct:  1743 QIVGNRDQLITLLLQLAEHVLNIILIHLQDRSV--SSNERG---SYGSKSHIQQEVTDLC 1797

Query:  1670 GKLIPILERLELLGEDKVGRDLKVFRRLVTSLKEMTIQK 1708
             GKL P ++RL LL E KVG +LKVF+RL T++KEM IQK
Sbjct:  1798 GKLSPTIDRLALLNEGKVGHNLKVFQRLATTVKEMAIQK 1836

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005635 "nuclear envelope" evidence=IDA

UNIPROTKB\|F1N1V3 NUP205 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

RGD\|1309413 Nup205 "nucleoporin 205" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|J9P7I1 NUP205 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q92621 NUP205 "Nuclear pore complex protein Nup205" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PZ99 NUP205 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BV83 NUP205 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040715-8 nup205 "nucleoporin 205" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|I3LC31 NUP205 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

FB\|FBgn0031078 Nup205 "Nucleoporin 205kD" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G51200	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 13 growth stages; Has 176 Blast hits to 143 proteins in 58 species- Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 19; Plants - 20; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink). (1838 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT2G41620	nucleoporin interacting component family protein; nucleoporin interacting component family prot [...] (861 aa)	•	•	0.961
	AT4G30840	WD-40 repeat protein family; WD-40 repeat protein family; FUNCTIONS IN- molecular_function unkn [...] (361 aa)	•		0.819
	AT1G80670	transducin family protein / WD-40 repeat family protein; This gene is predicted to encode a pro [...] (349 aa)	•		0.819
	AT1G75340	zinc finger (CCCH-type) family protein; zinc finger (CCCH-type) family protein; FUNCTIONS IN- z [...] (435 aa)	•		0.819

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1711
pfam11894		1612	pfam11894, DUF3414, Protein of unknown function (D	0.0

>gnl\|CDD\|221296 pfam11894, DUF3414, Protein of unknown function (DUF3414)	Back alignment and domain information

 Score =  635 bits (1640), Expect = 0.0
 Identities = 372/1578 (23%), Positives = 604/1578 (38%), Gaps = 264/1578 (16%)

Query: 5    NREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAF 64
                  GLG     ++V D           +  E  +L   L         +  D+    
Sbjct: 187  QLNTNRGLGFIEHIKFVRDF----------LEEEHELLAQILFGLSKQSGLTRDDILKLL 236

Query: 65   SALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHE 124
              LK       E ND L      +LL++  +       S   + S  LS         H 
Sbjct: 237  DHLKKL-----ERNDFLLVHYLPALLYAFDL-------SGSSEGSLPLSDARQLHTAIHS 284

Query: 125  IVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSN 184
             +    S   + G    +RLAW   L+          ++ ++      +     +   S+
Sbjct: 285  ELDNETS-WALPGLHAAIRLAWLAELIGWCKAP---PSLRATGIDFKEDDEKLFDEALSD 340

Query: 185  NVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLN 244
              F+FLL  A  T                                DK+++ +++    L 
Sbjct: 341  GAFEFLLSLAADTMP------------------------------DKLRKLRNREDDQLL 370

Query: 245  SYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLS-------GNDVL 297
            S     S   +     P    +          L  ++ +Y+  PEL             L
Sbjct: 371  S-----SQTHLQLGLEPPDDISL--RADLERFLLLIAYLYEGRPELALEFWGDPEPTSNL 423

Query: 298  WTFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELL----QGKAFRSIGWRTLFD 353
            + F+ +A + + +     AFL+ML++L+S  E A+  +ELL      K   SI W  +FD
Sbjct: 424  YGFLEWASDRNPSPLV-SAFLEMLASLSSGPENATNAFELLKEESGSKRSSSISWDHIFD 482

Query: 354  CLSIYDEKFK------QSLQTGGALLPDFQ--EGDAKALVAYLNVLQKVMENGNSI---- 401
             L  Y EK +      Q++Q   + LP+ +  E +   L AYL ++  V +         
Sbjct: 483  SLKYYIEKLREKQQQSQTIQRSRSPLPEIELEEEEIVGLSAYLRLISSVAKQSEVARSAL 542

Query: 402  -ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVV 460
             E  +W P ++ LF LL   +VP +LK A+   +AA +  S  +  +IW  L+Q+ L   
Sbjct: 543  LEHPSWTP-VDVLFGLLKC-SVPLHLKAAILKTLAALVAKSPEIAYSIWTSLDQWQLGGT 600

Query: 461  VGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSD----- 515
            VG       Q    Q   +Q EL   E+  E Y  + +F+ LL+AL+A     S      
Sbjct: 601  VG----APGQRSLQQPLGIQEELEAFESILEGYSLSRAFVQLLSALLAPLSSSSAFTFGK 656

Query: 516  --------RGRRFVGI---FRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMY 564
                     G R  GI     FV D VF  F  RAY DP EKW+L ++CL+     L  +
Sbjct: 657  LPFPEDLGAGYRKPGIWPYLDFVLDEVFLKFKSRAYTDPAEKWELQLSCLEFIETCLRSF 716

Query: 565  DIQEEDIDNAVEQSSTL---TQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSI 621
            D     + N+VE   +L   T      ++L     + + +  + V + +  I++ GVD +
Sbjct: 717  DPSF--LLNSVEPGISLDVDTSDFATYVRLHPGFRVMELLFNEKVLKALFRIIEEGVDEL 774

Query: 622  ITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPL-----YQPVDVILS----- 671
             +   +    PL EKAV L+L I+ LV E      D  RP+     + P++V+LS     
Sbjct: 775  DSYSPDPGKSPL-EKAVLLALRILDLVLELQDTYFDLLRPILKDSLFSPLNVLLSGLSSF 833

Query: 672  ----QDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVG---------------LVQ 712
                  +  I+A L        P+I   S+KI+  +SS                   L+ 
Sbjct: 834  EDAILFNLNIIAHLGLYIGSDNPEIALSSLKILKKISSSPNFNEADSPEGERLRRNKLLG 893

Query: 713  LLLKYNAASSLVEDYAACLELRSEESQIIEKS-GDDPGVLIMQLLIDNISRP--APNITH 769
            +    + +  + + +   LE   +E +   +S G +    I+ LLI N+S+    PNI H
Sbjct: 894  VFESIDESQRIKQGFVEQLESELDEEEAGAESPGLELKEAILDLLISNLSQSPDTPNIAH 953

Query: 770  LLLKFDLDTPIERTVLQP----KFHYSCLKIILEILEK----VSKPDVN---ALLHEFGF 818
            LLL FD+   +     Q         S L  IL +LEK    +S  +++     L E  +
Sbjct: 954  LLLGFDVRGNVLSLGPQLPGFFGSPSSLLHSILNLLEKSLDSISGLNIDEAPPRLAELAY 1013

Query: 819  QLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKR----------------N 862
            QLLY+LC +PLT GPT+  L +    F  +HL ++                        +
Sbjct: 1014 QLLYKLCSNPLTSGPTLRYLRSS-NDFLFRHLASLPFIDPNTLWDGLSFALANDNKFFLS 1072

Query: 863  SNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSL 922
            S+    IS L+QR+WLL+ LAIELH+   S +      + IL+ L G             
Sbjct: 1073 SSIGALISFLNQRSWLLQYLAIELHST--SKNGQPSRKERILSALLGG------------ 1118

Query: 923  PFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPT 982
                   T            +  LL+ + F       +L          L  +  L N  
Sbjct: 1119 ---SSTYTADGEP--GDNPTIFSLLDFLDFEFK---EELPPPQLEFFDGLDLDLCLEN-- 1168

Query: 983  TSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRW 1042
                      ++ G RL DLS     L  +   +        ++ +L  +   I++LL +
Sbjct: 1169 -------EPDNDYGVRLYDLSKLERLLRLEKRTLQSSGQL--AQGQLKAIMAEIEKLLEY 1219

Query: 1043 GWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGA-SASPDC 1101
              + N++ E ++AQL  L  W+Q+V+V ++    +   RS  + +IL A L       D 
Sbjct: 1220 VTERNRSRELRSAQLKALHSWTQLVQVLLTDCPLSGDVRSNFILEILQAILPKLEDYIDS 1279

Query: 1102 SLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIM 1161
             +  A  L  +ALT  A LR            D  T LD I V  L +   H L    I 
Sbjct: 1280 DVEFAEELASLALTLFALLRQ-----------DRPTGLDAIDVGSLIDSRLHQLFKTCID 1328

Query: 1162 AILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKE 1221
             IL + SS  LR   Y +LL Y Q      +PD  + + +                   E
Sbjct: 1329 GILSSGSSPELRSDLYVILLKYLQIVFKKESPDGESLLSR-----------------LTE 1371

Query: 1222 QAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEK--YFLNQL 1279
               L+      ++   + ++++   DA  G    + L+L +LDAL+ +D  K  + L  L
Sbjct: 1372 TMSLSRETLQIIKSYGERLIEVICNDAIDGEGTCRILALLLLDALVHLDSRKDNFILESL 1431

Query: 1280 QSRGFLRSCLMNV--SNVSYQDGKRSLDTLQRA-CTLEAELALLLRISHKYGKSGAQVLF 1336
                +L   + ++  ++ + Q     L  L       EA+LA L R++    +SGAQ L 
Sbjct: 1432 SKSNYLSLLVDSLKTTDEALQAALTPLPELLYELYAFEAKLAFLTRLAQT--RSGAQALL 1489

Query: 1337 SMGSLEHIASCKAVGLQGSLRRVATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSD 1396
              G  E +A CK   +   L  +           ++R   ++ P+L+L+ ++   +  S+
Sbjct: 1490 QAGLFEILAECKFFDIDPDL-GLDLLFDENSPDALERYYELLVPVLQLITAILLSMGPSN 1548

Query: 1397 FFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDE 1456
                    V +V  F+K H+ LV  VL+               L              + 
Sbjct: 1549 -----KSAVIQVRAFLKAHRDLVVGVLK-----------RDALLGGSGALSEAKGAGGEL 1592

Query: 1457 YGFVQGLFGMMSSLFSSD 1474
                QGL  +       D
Sbjct: 1593 S--EQGLVELAKLFTVLD 1608

This family of proteins are functionally uncharacterized. This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif. Length = 1612

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1711
PF11894		1691	DUF3414: Protein of unknown function (DUF3414); In	100.0
KOG1835		1704	consensus Uncharacterized conserved protein [Funct	100.0
KOG1835		1704	consensus Uncharacterized conserved protein [Funct	99.95
PF10487		931	Nup188: Nucleoporin subcomplex protein binding to	99.75
KOG4833		573	consensus Uncharacterized conserved protein [Funct	98.98

>PF11894 DUF3414: Protein of unknown function (DUF3414); InterPro: IPR021827 This family of proteins are functionally uncharacterised	Back alignment and domain information

Probab=100.00  E-value=6.6e-193  Score=2013.38  Aligned_cols=1345  Identities=31%  Similarity=0.448  Sum_probs=1131.3

Q ss_pred             CCCCCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHHHHHhccccccCCCCcchHHHHHH
Q 000295            9 PTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFS   88 (1711)
Q Consensus         9 ~~~lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~~~~~~~~d~~~ll~~Lk~~~~~~~~~~d~v~l~~~~~   88 (1711)
                      ++++|+++|++++.++.          .++|+.||+|||+|++...++++|+++++++||+.+     ++|.+.+|++|+
T Consensus       191 ~~~~~~~~~~~~~r~~l----------~~~~~~La~iL~~~~~~~~~~~~~~~~ll~~l~~~~-----~~D~~~~~~lpa  255 (1691)
T PF11894_consen  191 NRALGFQEHIEFQRDSL----------FEEHESLAQILYLLVKQSYLSPEDFKKLLDHLKKLD-----SNDFLTVHYLPA  255 (1691)
T ss_pred             cccccchhHHHHHHHHH----------HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcC-----CCchhhHHHHHH
Confidence            56999999999999996          999999999999999999999999999999999974     689999999999


Q ss_pred             HHHHHHHhhhcccCCCCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHHHhhcchhhhhhhcCCCCc
Q 000295           89 LLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSS  168 (1711)
Q Consensus        89 ll~a~~~s~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~l~~~~~~~~~~~~~~~~~~  168 (1711)
                      ++|+++.+      ++..+...|+..|+++.+.|++.+.++. +|+.+||+++|++||+++|+++...++....   ...
T Consensus       256 ll~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~w~~~~l~a~i~l~w~~~l~~~~~~~~~~~~---~~~  325 (1691)
T PF11894_consen  256 LLAAIDIS------GGSPLGSLPLSDDRELHSQIHKELDSDS-DWKLPGLKAVIQLAWLLFLIGWCKDDPSLEA---QGI  325 (1691)
T ss_pred             HHHHHHhh------cccccccCcchhHHHHHHHHHHhhcccc-ccccccHHHHHHHHHHHHHHHHHcCCccccc---ccc
Confidence            99999875      3344678899999999999999998755 5999999999999999999997775433311   124


Q ss_pred             hhhHHHHHHHHHHHhcCcHHHHHHHHHhccCCCCC---------------------------chhH-HHHHHHHHHHHHH
Q 000295          169 SELSNIRSCLETIFSNNVFQFLLDKALRTAAYQND---------------------------DEDM-VYMNNAYLHKLIT  220 (1711)
Q Consensus       169 ~~~~~~~~~~~~Al~~~vF~Fl~~~ll~~~~~~~~---------------------------~~~~-~~f~~~~lh~li~  220 (1711)
                      +..+++++++++||++|||+||++.++++..++..                           ++.+ +.|+++++|.||+
T Consensus       326 d~~~~~~~~~~~ai~~gaf~fL~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~~~~~~~s~~~~~~~~~~~l~~~i~  405 (1691)
T PF11894_consen  326 DFKDDDEKLFEEAIEDGAFEFLLSIAADTPEWQDPSRWSNFYDFRSLLQRKIPRLTPENDSFSEFFNEEFFMRQLHSFID  405 (1691)
T ss_pred             CHHHHHHHHHHHHHHcChHHHHHHHHHhcccccchhhhhhhHHHHHHHHhhccccccccccccHHHHHHHHHHHHHHHHH
Confidence            45567779999999999999999999998333321                           2223 4589999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhhhhccCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhccCcccccccccch--
Q 000295          221 CFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLW--  298 (1711)
Q Consensus       221 ~fI~~~~m~~kvk~lr~~~de~~~~~r~~~~~~~~~d~~~~~~~~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fW--  298 (1711)
                      +||++  ||+|||+||.+|||++   |..+.+  ..++.  ..++.++++.|||+||++|+++|++||+++   .+||  
T Consensus       406 ~fI~~--m~~~l~~Lr~~eed~~---~~~~~~--~~~~~--~~~~~~~~~~dlE~fl~~ia~~Y~~rPe~~---~~FW~d  473 (1691)
T PF11894_consen  406 SFISN--MPDKLRKLRDREEDSL---LSSQTH--QQEGE--DPPDDISLRADLERFLLLIAYLYDGRPELA---LEFWSD  473 (1691)
T ss_pred             HHHHh--hHHHhhhhchhHHHHH---HHhHhh--hhcCC--CCCcccchhhhHHHHHHHHHHHHcCChHHH---HHhCCC
Confidence            99996  9999999999999995   444433  22221  111346779999999999999999999999   8999  


Q ss_pred             --------hHHHHhhccCCCcchHHHHHHHHHHhcCCchhHHHHHHHhcCCC-----CCcccHHHHHHHHHHHHHHhhh-
Q 000295          299 --------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKA-----FRSIGWRTLFDCLSIYDEKFKQ-  364 (1711)
Q Consensus       299 --------gFl~wa~~~~~~~~~~~afl~ML~sLa~g~e~A~~~~~~L~~~~-----~~~vSW~~iF~~L~~Y~~~l~~-  364 (1711)
                              ||++||+++++ +++++|||+||+|||+|++||++||+||++++     .+++||+|||++|++|++++++ 
T Consensus       474 ~e~~s~l~gFl~wa~~~~~-~~l~~af~~ML~sLs~g~~~A~~a~~~L~~~~~~~~~~~~~SW~~if~~L~~Y~~~l~~~  552 (1691)
T PF11894_consen  474 PEVTSNLYGFLRWASDRNP-SPLVSAFLEMLASLSSGPECASAAFNFLKDNSGKGRRSSSVSWDQIFQSLQYYIDKLRQQ  552 (1691)
T ss_pred             cccchhHhHHHHHHhhcCC-chhHHHHHHHHHHHcCChHHHHHHHHHHhhcccCCCCCCcccHHHHHHHHHHHHHHhccc
Confidence                    69999999976 78889999999999999999999999999764     3599999999999999999993 


Q ss_pred             cc-ccCCC------CCC--CCChhhHHHHHHHHHHHHHHHhcCcc-----ccccccCCChHHHHHhccCCCCChhHHHHH
Q 000295          365 SL-QTGGA------LLP--DFQEGDAKALVAYLNVLQKVMENGNS-----IERKNWFPDIEPLFKLLSYENVPPYLKGAL  430 (1711)
Q Consensus       365 ~~-~~~~~------~~~--~~~~ee~~~L~a~L~Li~~V~~~~~~-----~e~~~w~~~i~~Lf~Ll~~~~VP~~LKa~i  430 (1711)
                      .. ++.++      ..+  +++|+|++||+|||+||++||++++.     +++++|.+ +++||+|++ |+||+.|||++
T Consensus       553 ~~~~~~~~~~~~~~~~~~~el~~ee~~~L~a~L~Li~~V~~~s~~ar~~l~~~~~~~~-~~~L~~L~~-~~vp~~Lkaai  630 (1691)
T PF11894_consen  553 QQQQQSQSIQRSRSPPPEIELSPEEVEMLSAYLRLISSVVRNSEQARSALLENPNWNP-IDILFGLLS-CPVPPSLKAAI  630 (1691)
T ss_pred             cCCCCccccccCCCCCcccCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCCch-HHHHHHHhc-CCCCHHHHHHH
Confidence            22 22111      122  36999999999999999999999874     46678886 999999999 69999999999


Q ss_pred             HHHHHHhhhcChhhHHHHHHHHhhccCCCccccCCCCCCcccCCcccchHHHHHHHhhhccCCcchHHHHHHHHHhhcCC
Q 000295          431 RNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEE  510 (1711)
Q Consensus       431 ~~tLaal~~~s~~~a~~iW~~Ld~~~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~Yp~T~aFl~LL~~Li~~~  510 (1711)
                      |+||+||+.++++++++||+.||+|++..+..++.+..    .++..|+..|++++|++.++||+|+||++||++|++|+
T Consensus       631 ~~~Laal~~~~~~~~~~iW~~Ld~~~~~~~~~~~~~~~----~~~~~~i~~el~~~e~~~~~y~~t~aFl~Ll~~Li~~~  706 (1691)
T PF11894_consen  631 FNALAALAAKSPEIANQIWQLLDQWQILSTAPTPSSSA----LPQPSGIQSELEEFESRLEEYPETRAFLQLLNALISPP  706 (1691)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCcccc----cCCCccHHHHHHHHHhhhcCCchHHHHHHHHHHHhCCC
Confidence            99999996559999999999999999965532222111    12668999999999999999999999999999999998


Q ss_pred             ------------CCCCCCccc---cchhHHHHHhhhhCCCCccccCCchhHHHHHHHHHHHHHHHHhcccCCchhhhhhh
Q 000295          511 ------------KDVSDRGRR---FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAV  575 (1711)
Q Consensus       511 ------------~~~lg~g~R---~~py~~FV~~~VF~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~edl~~~~  575 (1711)
                                  |..+|.|||   +|||++||+++||++ ++|.|+||.|||+++..||++|+++|++|+|+   +....
T Consensus       707 ~~~~~~~~~l~~P~~LG~~~R~~Gi~pY~~fv~~~Vf~~-~~r~y~~~~ekw~l~~~cL~~~~~~L~~f~~~---~i~~~  782 (1691)
T PF11894_consen  707 SDSSFLNDSLPFPENLGAGYRMPGIWPYVDFVLDEVFLK-SSRSYKDPSEKWQLALSCLEFFEKCLSSFDPS---FILNS  782 (1691)
T ss_pred             cccccccccCCCccccCccccCCCcHHHHHHHHHHHHhc-cchhcCCHHHHHHHHHHHHHHHHHHHHhCCHH---HHhhc
Confidence                        667999999   889999999999999 99999999999999999999999999999985   33333


Q ss_pred             hcCCCcCCC----Cccccc---CcHHHHHHHhccChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHH
Q 000295          576 EQSSTLTQS----SPIQMQ---LPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILV  648 (1711)
Q Consensus       576 ~~~~~~~~~----~~l~~y---~P~~~vm~~~L~~~~v~~~l~~ii~~Gvd~l~~e~~~~~y~~~l~~~vl~aL~Il~~v  648 (1711)
                      .+++.+.+.    .++.+|   |||++||.+||+++++++.||+|+++|+|.+.++.+. .+++++++|+++||+||+++
T Consensus       783 ~~~~~~~d~~~~~~~~~~~v~~hP~~~vm~~~l~~~~~~~~l~~ii~~g~~~l~~~~~~-~~~~~l~~~v~~~L~Il~~v  861 (1691)
T PF11894_consen  783 NESNINLDSIVDTSDLATYVKLHPGFRVMLELLFDEKVLRSLFSIIDEGVDSLDSYSPD-PGGSPLEECVLRSLRILNRV  861 (1691)
T ss_pred             ccccccccccccccchhhhhhcCcHHHHHHHHhcCcHHHHHHHHHHHHhHHHHhhcCcc-cchHHHHHHHHHHHHHHHHH
Confidence            333332222    456666   8999999779999999999999999999999877653 35799999999999999999


Q ss_pred             Hhhhhhhhhhhccccc------chhhhh----------ccCchHHHHHHhhhccCCcchhHHHHHHHHHHHhh--hh---
Q 000295          649 FEKDLLLSDFWRPLYQ------PVDVIL----------SQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSS--RM---  707 (1711)
Q Consensus       649 L~~q~~f~d~lrpi~~------~ld~lL----------s~~~~~I~~L~~Yv~~~~~p~lal~SikIL~~ls~--r~---  707 (1711)
                      |++|++|+|.+||+++      +.+.++          .++.+.|++||+|||.++ |+|++.|+|||++++.  ..   
T Consensus       862 L~~Q~~f~~~~~p~~~~~~~~~~~~~~~~~~~sf~~~~~~~l~iv~~l~l~~~~~~-p~ial~alkIL~~ls~s~~~~~~  940 (1691)
T PF11894_consen  862 LELQDTFLDVVRPILKSDIIYRPLDVLLLGLNSFEDAILFNLNIVVHLGLYVGSDH-PEIALLALKILSKLSSSPKFNSA  940 (1691)
T ss_pred             HHHHHHHHHHHHHHhcccccccChHHHhhccCcchhhhcchHHHHHHhHhhcCCCC-HHHHHHHHHHHHHHHcCCCCccc
Confidence            9999999999999888      344433          357788999999999887 9999999999999982  23   


Q ss_pred             ----------hhHHHHHhhhchhHHHHHHHHHHhccccccccc-cccCCCChHHHHHHHHHhccCCC--CChHHHhhhCC
Q 000295          708 ----------VGLVQLLLKYNAASSLVEDYAACLELRSEESQI-IEKSGDDPGVLIMQLLIDNISRP--APNITHLLLKF  774 (1711)
Q Consensus       708 ----------~~lv~~l~~~~es~~I~~~Fv~~Le~~~~d~~~-~e~~~~~~k~~IL~lLl~nL~~~--~PnlAHlLLGF  774 (1711)
                                ++++++|++++++.+|++|||+|||.++++.++ .+.....+|..||+||++||+.+  +||||||||||
T Consensus       941 ~~~~~~~~~~n~ll~~l~~~~es~~I~~~fv~~Le~~~~~~~~~~~~~~~~ik~~IL~lL~~~L~~~~~~PniAHlLLGF 1020 (1691)
T PF11894_consen  941 DSFSSRRLRRNRLLTILESSDESERIRFGFVEQLEADIDEFEEGAESPSLSIKLAILDLLLENLSQPPPAPNIAHLLLGF 1020 (1691)
T ss_pred             ccccccccchhHHHHHHhcccHHHHHHHHHHHHHccccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcHHHHHhCC
Confidence                      469999999999999999999999988665443 33344679999999999999755  99999999999


Q ss_pred             ccCCCCccccccC----CCCcchHHHHHHHHHhcCCCC-------CchhHHHHHHHHHHHhhcCCCCcHHHHHHHhcccc
Q 000295          775 DLDTPIERTVLQP----KFHYSCLKIILEILEKVSKPD-------VNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKY  843 (1711)
Q Consensus       775 dv~~~~~~~~l~p----~~~~ScLhsIL~lL~~~~~~~-------~~p~L~e~~~~lL~~Lc~~p~TS~~tL~~LR~~~~  843 (1711)
                      ++.+++..+..+|    ++++||||+||++|++++++.       .+|+|+|+||+|||+||+||+||+|||||||+++ 
T Consensus      1021 ~~~~~~~~~~~~~~g~~~~~~S~lhsiL~lL~~~~~~~~~~~~~~~~~~L~e~~~~ll~~Lc~~p~TS~~~L~~LR~~~- 1099 (1691)
T PF11894_consen 1021 DVRGNVSSLSLQDPGFFGSPRSCLHSILDLLESSLDSDSNSDIDYWPPRLAELCYRLLYKLCSSPLTSEPTLRYLRSNN- 1099 (1691)
T ss_pred             CcCCchhhcccccccccCCcCcHHHHHHHHHHhccccccCcchhcccHHHHHHHHHHHHHHHcCCcchHHHHHHHHhHH-
Confidence            9998888888885    468999999999999988632       2489999999999999999999999999999975 


Q ss_pred             chHHHhhhhcC-CCCCCCCCCch------------hHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHhhcCC
Q 000295          844 QFFVKHLDAIG-VAPLPKRNSNQ------------ALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGR  910 (1711)
Q Consensus       844 dff~~~L~~~~-i~~l~~~~~~~------------~~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~  910 (1711)
                      |||.+|+...| ++|.+.|+|..            .++.+||++|||+|||+|+|||.++.  .++++.+++|++.|+|.
T Consensus      1100 df~~~~l~~~p~i~~~~~w~g~~~~~~~f~~~~~~~~~~~~L~~Rs~lL~~~AlEL~~~s~--~~~~s~~~~l~~~Ll~~ 1177 (1691)
T PF11894_consen 1100 DFFFRHLSSLPFIDPQTIWDGERISDPDFFLSTSASALISFLHQRSWLLKYLALELHSLSQ--SGQRSQKRRLLSLLLGN 1177 (1691)
T ss_pred             HHHHHHHHcCCCCCcccccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHhcc
Confidence            99999999998 78999999853            27889999999999999999999875  47888999999999992


Q ss_pred             CccC-CCCcccccccccccccccccccccchhhhhhhhccccCCCCCchhhhhhhhhhcchhhHHHHHhcCCCCCCCCCc
Q 000295          911 DHIE-DTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGI  989 (1711)
Q Consensus       911 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~lLd~l~F~~~d~~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~  989 (1711)
                      .... .++.                  ....+.||+|||.++|.+ ....+.|++  +++.+..++..+.+|.       
T Consensus      1178 ~~~~~~~~~------------------~~~~~~i~~lld~l~~~~-~~~~~~~~l--~~f~~~~l~~~~~~c~------- 1229 (1691)
T PF11894_consen 1178 SQSSTDDGE------------------PIINPSIFDLLDFLDFDF-SWEFPPPQL--EFFDDLDLELCLEECT------- 1229 (1691)
T ss_pred             ccccCCCCC------------------CccccHHHHHHhhhCCCc-ccCCCCchh--hhhchhcHHHHHHhcc-------
Confidence            1111 0111                  124556999999999999 223344443  3445555666666672       


Q ss_pred             eeecCCCcccccHHHHHHHHHHhhhhccccccCCCchhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000295          990 YYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV 1069 (1711)
Q Consensus       990 ~~~~~~g~~l~di~~L~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~~iL~~~~~~N~~~~~~~a~~~~L~aW~qLv~V 1069 (1711)
                        .+.+|++++|+.++++++..+.+..+++.. . +.++.+.+++|++.|++|++++|+.++.++||+++|+||+|||+|
T Consensus      1230 --~~~~g~~~~Dl~~l~~lL~~~~~~~~~~~~-~-~~~~~~~v~~E~~~il~~~~~~N~~~~~~~a~~~~L~sW~qLv~V 1305 (1691)
T PF11894_consen 1230 --DSEGGVRLYDLSKLHELLQLERKSLQSSGQ-L-TAQQREAVEEEIQKILEYAVARNRRRELAAAQLHALESWRQLVEV 1305 (1691)
T ss_pred             --ccCCCCeEeeHHHHHHHHHHHHHHhhcccc-c-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              134567899999999999999988876521 1 456788899999999999999999999999999999999999999


Q ss_pred             HHhccccchhhHHHHHHHHHHHHhhccCC-CccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccchhhhhhhccc
Q 000295         1070 SVSRRISALGNRSEILYQILDACLGASAS-PDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLS 1148 (1711)
Q Consensus      1070 ~~s~~~~~~~~r~~~Ild~L~~il~ki~~-~~~~~~~a~~Ls~l~ltLl~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~ 1148 (1711)
                      +++++......|.++|+|+|+.++||+++ .+.+++++.++++++++|+++||.++.....           ....++++
T Consensus      1306 ~~~~~~l~~~~r~~~ile~Lq~iLpkl~~~~~~~~~~a~~ls~l~l~L~~~L~~~~~~~~~-----------~~~~~~l~ 1374 (1691)
T PF11894_consen 1306 LVSDCPLSPDQRSNFILELLQAILPKLEDYPECDPEFAEELSSLALTLLAKLRQDRISQSD-----------SEDSGSLP 1374 (1691)
T ss_pred             HHHhCCCCHHHHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHhhhhcccc-----------cccccccc
Confidence            99999988899999999999999999995 4889999999999999999999998631100           11124477


Q ss_pred             cchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhccCCCCchhhHHhhhhccccCcchhhhhhhhHHHHhHHH
Q 000295         1149 NGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHA 1228 (1711)
Q Consensus      1149 ~~~~~~iL~~ll~~Il~~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~d~~~~~~~~~~~~l~~~ 1228 (1711)
                      .+++++||+.+|+||+++++++.+|+|+|++|++||+++.+....+.......    +..+         +.....++++
T Consensus      1375 ~~~L~~lf~~~l~~Il~~~ss~~lR~~lY~~l~~yL~~~~~~~~~~~~~~~~~----~~~~---------~~~~~~l~~~ 1441 (1691)
T PF11894_consen 1375 DSRLHQLFKSCLQGILSSGSSQRLRSNLYAILLNYLQIVQKNSSLEDGQSLSS----RLDD---------SSEQSSLEKM 1441 (1691)
T ss_pred             hhHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHHHHhcccccccchhcchh----hccc---------chhhHHHHHH
Confidence            88999999999999999999999999999999999999976553111111110    0000         1122358999


Q ss_pred             HHHHHHhhhhHHHHHHhhcccCCCcchHHHHHHHHHHHHccc---CcchHHHHHHhcCcHHHHHHHhhhh--hhhcccc-
Q 000295         1229 NFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICID---HEKYFLNQLQSRGFLRSCLMNVSNV--SYQDGKR- 1302 (1711)
Q Consensus      1229 ~~~iI~~~ge~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~ld---~~~~il~~L~~~g~L~~lv~sl~~~--~L~~~~~- 1302 (1711)
                      ++++|+++|++|||+||+||++|||+|||+|++|||+|+++|   .+++|+++|.|+|||+++|++++++  .|++... 
T Consensus      1442 ~~~~i~~~g~~Li~vic~DA~~g~~~~r~~Al~lLdaLv~ld~~~~~~~il~~L~~~g~L~~lv~sl~~~d~~l~~~~~~ 1521 (1691)
T PF11894_consen 1442 NLQIIKSYGERLIDVICRDAIDGHGVCRILALSLLDALVQLDSQEKSNFILEYLSRRGYLKSLVDSLKRTDEDLQASLQP 1521 (1691)
T ss_pred             HHHHHHHhhhHHHHHHHhHhhcCcccHHHHHHHHHHHHHHhcccccccHHHHHHHhCCcHHHHHHHHHhhHHHHHhccCC
Confidence            999999999999999999999999999999999999999999   5799999999999999999999754  6888666 


Q ss_pred             CcchhhHHHHHHHHHHHHHHHhhhcCcchHHHHHhcchhHHhhhcccccccCccccc--ccC--CCccCCchhhhhhhhh
Q 000295         1303 SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRV--ATK--PRRALGGDIDRQRMIV 1378 (1711)
Q Consensus      1303 ~~~~l~~L~~yea~laLLlriAq~~tr~GA~~Ll~~gl~~~L~~~~~~~~~Pd~~~~--~~~--~~~~~p~~~~ry~~lL 1378 (1711)
                      .|+++++||+|||+|+||+||||  ||.||++|+++|+|++|++|+||++|||.+..  +++  +..+ |++.+|||++|
T Consensus      1522 ~~~~l~~L~~yea~laLL~RiAq--tr~GA~~Ll~~~lf~~L~~~~~l~~~Pdl~~~~~~~~~~~~~~-p~~~~ry~~lL 1598 (1691)
T PF11894_consen 1522 IPDSLRELYVYEAKLALLLRIAQ--TRSGAEALLQSGLFQVLAECKFLDADPDLGLDLMFDNSDPMSF-PSALERYYQLL 1598 (1691)
T ss_pred             CCcchHhHHHHHHHHHHHHHHHc--ChHHHHHHHHCCHHHHHHcCCCcCCCCccchhhcccccccccC-chHHHHHHHHH
Confidence            89999999999999999999999  99999999999999999999999999998643  332  2223 99999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCChhhHHHHHHHHHHHHhccccccCCchh
Q 000295         1379 TPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYG 1458 (1711)
Q Consensus      1379 ~PvlrL~~sv~~~~~s~G~~~~n~~~~~qv~~FL~~h~~li~~vLr~~~~~~~~~~Leel~ll~~ll~~~~~~~~~~~~~ 1458 (1711)
                      +||||||+++++++   |  ++|++++.||++||.+|+++|++|||++++..+.+..++..++++...+.+++++.... 
T Consensus      1599 ~PvlrLi~ail~s~---G--~~n~~~~~qv~~FL~~h~~lv~~vLk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1672 (1691)
T PF11894_consen 1599 VPVLRLISAILSSL---G--SSNKSAVQQVLNFLKAHRDLVVGVLKRDALIGNLGSSEIYSLVNSKLSKDWPYEESRLS- 1672 (1691)
T ss_pred             HHHHHHHHHHHHhc---C--cccHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchhhhhhhhhhhhhhhhhhHH-
Confidence            99999997776666   8  99999999999999999999999999999999888888888888888888777655332 


Q ss_pred             hHHHHHHHHHHHhh
Q 000295         1459 FVQGLFGMMSSLFS 1472 (1711)
Q Consensus      1459 ~~~~l~~l~~~l~~ 1472 (1711)
                       .+++..|+.+++-
T Consensus      1673 -~~~l~~l~~~f~~ 1685 (1691)
T PF11894_consen 1673 -QQGLEELVKLFML 1685 (1691)
T ss_pred             -HHHHHHHHHHHhh
Confidence             5567776666543

This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif.

>KOG1835 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1835 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF10487 Nup188: Nucleoporin subcomplex protein binding to Pom34; InterPro: IPR018864 This is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes []	Back alignment and domain information

>KOG4833 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1711
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 81.4 bits (200), Expect = 2e-15
 Identities = 108/750 (14%), Positives = 227/750 (30%), Gaps = 252/750 (33%)

Query: 638  VQLSLEIVILVFEKDLL-------LSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLP 690
             Q   + ++ VFE   +       + D  +       ++  ++ + I+            
Sbjct: 14   HQYQYKDILSVFEDAFVDNFDCKDVQDMPKS------ILSKEEIDHIIMS---------K 58

Query: 691  QIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGV 750
                 ++++   L S+   +VQ  ++      L  +Y   +     E +        P  
Sbjct: 59   DAVSGTLRLFWTLLSKQEEMVQKFVE----EVLRINYKFLMSPIKTEQR-------QPS- 106

Query: 751  LIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVN 810
            ++ ++ I+   R   N   +  K+++     +  L+       L+  L  L    +P  N
Sbjct: 107  MMTRMYIEQRDR-LYNDNQVFAKYNV--SRLQPYLK-------LRQALLEL----RPAKN 152

Query: 811  ALLHE---FGFQLL-YELCLDP------------LT---CGPTMDLLSNKKYQFFVKHLD 851
             L+      G   +  ++CL              L    C     +L  +  Q  +  +D
Sbjct: 153  VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQID 210

Query: 852  AIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRD 911
                +     +SN  LRI S+  +A L +LL  + +          E C  +L ++    
Sbjct: 211  PNWTS-RSDHSSNIKLRIHSI--QAELRRLLKSKPY----------ENCLLVLLNVQNAK 257

Query: 912  HIEDTD---RTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFR--------SPDTAMK 960
                 +   + L        +T    TR    +  L                 +PD    
Sbjct: 258  AWNAFNLSCKIL--------LT----TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 961  LSQIVSNMKYDLLAEEIL-GNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQ 1019
            L     + +   L  E+L  NP       I       + + D  +  D  WK +N    +
Sbjct: 306  LLLKYLDCRPQDLPREVLTTNPRRLS--II------AESIRDGLATWDN-WKHVN--CDK 354

Query: 1020 LSNFGSEAELNDVKEAIQQLLRWGWKY--------NKNLEEQAAQLHMLTGWSQVVEVSV 1071
            L+    E+ LN ++ A  + +     +        + ++      L ++  W  V++  V
Sbjct: 355  LTTI-IESSLNVLEPAEYRKM-----FDRLSVFPPSAHIPTIL--LSLI--WFDVIKSDV 404

Query: 1072 SRRISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGL 1131
                            +++     S            L +         +  K       
Sbjct: 405  M--------------VVVNKLHKYS------------LVE---------KQPK------- 422

Query: 1132 NSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRR---QYALLLSYFQYCQ 1188
              +S   +              S+  +L    ++ E+  AL R     Y +  ++     
Sbjct: 423  --ESTISI-------------PSIYLELK---VKLENEYALHRSIVDHYNIPKTFDSD-- 462

Query: 1189 HMLAPDVPTTVLQYL---LLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDL-F 1244
             ++ P +      ++   L + +  E + L              F  +       LD  F
Sbjct: 463  DLIPPYLDQYFYSHIGHHLKNIEHPERMTL--------------FRMV------FLDFRF 502

Query: 1245 IKDATQGSEPGKTLSLYVLDAL---------ICIDHEKY---------FLNQLQS----- 1281
            ++   +        S  +L+ L         IC +  KY         FL +++      
Sbjct: 503  LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562

Query: 1282 --RGFLRSCLMNVSNVSYQDGKRSLDTLQR 1309
                 LR  LM      +++  +    +QR
Sbjct: 563  KYTDLLRIALMAEDEAIFEEAHKQ---VQR 589

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00