Citrus Sinensis ID: 000321
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1670 | 2.2.26 [Sep-21-2011] | |||||||
| Q9NTI5 | 1447 | Sister chromatid cohesion | yes | no | 0.579 | 0.668 | 0.251 | 7e-72 | |
| Q5F3U9 | 1412 | Sister chromatid cohesion | yes | no | 0.579 | 0.684 | 0.251 | 8e-72 | |
| Q4VA53 | 1446 | Sister chromatid cohesion | yes | no | 0.579 | 0.668 | 0.25 | 2e-71 | |
| Q6TRW4 | 1447 | Sister chromatid cohesion | yes | no | 0.579 | 0.668 | 0.25 | 4e-71 | |
| Q5U241 | 1464 | Sister chromatid cohesion | N/A | no | 0.579 | 0.661 | 0.245 | 1e-70 | |
| Q498H0 | 1448 | Sister chromatid cohesion | N/A | no | 0.580 | 0.669 | 0.246 | 1e-69 | |
| A1L1F4 | 1320 | Sister chromatid cohesion | no | no | 0.598 | 0.756 | 0.244 | 8e-66 | |
| Q29RF7 | 1337 | Sister chromatid cohesion | no | no | 0.579 | 0.724 | 0.249 | 2e-65 | |
| A4L9P7 | 1333 | Sister chromatid cohesion | no | no | 0.579 | 0.726 | 0.248 | 3e-65 | |
| Q5F3V3 | 1330 | Sister chromatid cohesion | no | no | 0.580 | 0.728 | 0.246 | 1e-64 |
| >sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 | Back alignment and function desciption |
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Score = 273 bits (699), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 260/1032 (25%), Positives = 468/1032 (45%), Gaps = 65/1032 (6%)
Query: 56 LLKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGR 114
LKH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 115 RVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEE 173
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICE 187
Query: 174 SEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSR 229
+ + ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 188 GDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTS 247
Query: 230 PGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 289
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 290 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDEN 349
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEA 365
Query: 350 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 409
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 366 IRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSAA 425
Query: 410 GSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFD 468
G + WI K+L Y +E + + P +R++ +++ D
Sbjct: 426 GKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLD 485
Query: 469 RIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAK 527
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P K
Sbjct: 486 LNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGK 541
Query: 528 AEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTL 584
A++ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 542 AQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMI 601
Query: 585 SM---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSP 632
+ + + + E + ++ +V + Q +++ +++L +L+ P
Sbjct: 602 KFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHP 661
Query: 633 LLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEG 690
+ E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 662 ISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKG 721
Query: 691 SRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPV 748
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A
Sbjct: 722 PPRQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ 780
Query: 749 FETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVK 804
F +S + FI +L T W ++ S ++KI IK +V+ L +K
Sbjct: 781 FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK 840
Query: 805 DAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIP 862
+ H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I
Sbjct: 841 NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT 900
Query: 863 VDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE 920
++ + L Q +++F K+H+ + L +Y CA +K P E
Sbjct: 901 LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERR 955
Query: 921 ---KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDV 977
+Q L I + + + +V S PEY++PY +H AH PD + +D+
Sbjct: 956 AHARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDI 1011
Query: 978 KAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSK 1034
+ + V L+F++ +L+ K+E+ S + I + +IK ++D DA ++
Sbjct: 1012 EQLKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDAKMNE 1063
Query: 1035 NSHAICDLGLSI 1046
+ +CD+ ++I
Sbjct: 1064 KLYTVCDVAMNI 1075
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Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Plays a role in androgen-induced proliferative arrest in prostate cells. Homo sapiens (taxid: 9606) |
| >sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3 | Back alignment and function description |
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| >sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus GN=Pds5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus GN=Pds5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis GN=pds5b-b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis GN=pds5b-a PE=1 SV=1 | Back alignment and function description |
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| >sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio GN=pds5a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens GN=PDS5A PE=1 SV=1 | Back alignment and function description |
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| >sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus GN=Pds5a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus GN=PDS5A PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1670 | ||||||
| 147777785 | 1922 | hypothetical protein VITISV_030148 [Viti | 0.959 | 0.834 | 0.665 | 0.0 | |
| 255585406 | 1735 | androgen induced inhibitor of proliferat | 0.951 | 0.915 | 0.644 | 0.0 | |
| 356522079 | 1641 | PREDICTED: sister chromatid cohesion pro | 0.958 | 0.975 | 0.638 | 0.0 | |
| 224139450 | 1417 | predicted protein [Populus trichocarpa] | 0.826 | 0.974 | 0.718 | 0.0 | |
| 356564452 | 1642 | PREDICTED: sister chromatid cohesion pro | 0.959 | 0.975 | 0.632 | 0.0 | |
| 449443672 | 1692 | PREDICTED: sister chromatid cohesion pro | 0.883 | 0.872 | 0.654 | 0.0 | |
| 356557993 | 1656 | PREDICTED: sister chromatid cohesion pro | 0.959 | 0.967 | 0.611 | 0.0 | |
| 224089565 | 1411 | predicted protein [Populus trichocarpa] | 0.782 | 0.926 | 0.696 | 0.0 | |
| 356532370 | 1648 | PREDICTED: sister chromatid cohesion pro | 0.956 | 0.969 | 0.607 | 0.0 | |
| 186530158 | 1607 | sister chromatid cohesion protein PDS5 [ | 0.934 | 0.970 | 0.585 | 0.0 |
| >gi|147777785|emb|CAN75734.1| hypothetical protein VITISV_030148 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 2155 bits (5584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1110/1669 (66%), Positives = 1325/1669 (79%), Gaps = 66/1669 (3%)
Query: 22 LQQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAP 81
L+QAATCL+EL+QSP ASILE++QP LNAIV+P LLKHQD+DVKLLVATCICEITRITAP
Sbjct: 85 LKQAATCLTELDQSPSASILESLQPSLNAIVKPELLKHQDRDVKLLVATCICEITRITAP 144
Query: 82 EAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVN 141
EAPYSDDVLKDIF+LIV TFSGL DT GP+FGRRVVILETLA+YRSCVVMLDLECD+LVN
Sbjct: 145 EAPYSDDVLKDIFRLIVSTFSGLSDTNGPAFGRRVVILETLARYRSCVVMLDLECDDLVN 204
Query: 142 EMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDT---AR 198
EM+ TFF+VA DDHPESVL+SMQTIM+VLLEESED++EDLL +LS LGRNK+D AR
Sbjct: 205 EMFRTFFSVARDDHPESVLTSMQTIMVVLLEESEDVREDLLFSILSILGRNKSDVTTAAR 264
Query: 199 RLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPY 258
RLAMNVIE CA KLE GIKQFLVSS+SGD+R +S IDYHEVIYD+YRC+PQILSGV PY
Sbjct: 265 RLAMNVIEHCAAKLEPGIKQFLVSSISGDNRSMNSEIDYHEVIYDIYRCAPQILSGVTPY 324
Query: 259 LTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEH 318
LTGELLTD LDTRLKAV LVGDLFA+PG A +E F +FSEFLKRL DR+V VRMSVLEH
Sbjct: 325 LTGELLTDNLDTRLKAVKLVGDLFALPGLAISEAFQPIFSEFLKRLADRVVGVRMSVLEH 384
Query: 319 VKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVA 378
VKSCLL++PSRA+APQI++ALCDRLLD+DENVRKQVVAVICDVACH+L+SIPVET KLVA
Sbjct: 385 VKSCLLSNPSRAEAPQIISALCDRLLDYDENVRKQVVAVICDVACHSLSSIPVETXKLVA 444
Query: 379 ERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTI 438
ERLRDKSVLVK+YT+ERLA+I+ CLR +GS+N +EF+WIPGKILRC YDKDF SDTI
Sbjct: 445 ERLRDKSVLVKKYTLERLAEIYNLYCLRCCDGSLNPSEFDWIPGKILRCFYDKDFRSDTI 504
Query: 439 ESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQM 498
ESVLC +LFPT FS+KD+V+HWVR+FSGFD++E+KALEKILEQKQRLQQEMQRYLSL+QM
Sbjct: 505 ESVLCETLFPTEFSIKDKVKHWVRVFSGFDKVEVKALEKILEQKQRLQQEMQRYLSLKQM 564
Query: 499 HQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFD 558
HQDG+ PEIQKK+ +C R+MSR FA+PAKAEENF ILDQLKD N+WKIL +L+D TSF
Sbjct: 565 HQDGEGPEIQKKVTYCLRIMSRLFADPAKAEENFQILDQLKDVNIWKILSSLIDPKTSFH 624
Query: 559 QAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQ 618
QA + RDDLL+ILG KHRLYDFL TLS+KCSYLLFNKEHVKE LLE A QKSS N Q++Q
Sbjct: 625 QACSSRDDLLRILGEKHRLYDFLGTLSLKCSYLLFNKEHVKEFLLEAAIQKSSGNTQYIQ 684
Query: 619 SCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSS 678
SCM++L +LARFSPLLL G EE+LV+LLK++NEIIKEG+LH+LAKAGGTIREQLA TSSS
Sbjct: 685 SCMNVLVVLARFSPLLLSGAEEDLVHLLKDDNEIIKEGVLHILAKAGGTIREQLAVTSSS 744
Query: 679 VDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSL 738
VDL+LERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDML++KTHLPAVLQSL
Sbjct: 745 VDLILERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLDKKTHLPAVLQSL 804
Query: 739 GCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVK 798
GCIAQTAMPVFETRESEIE FIK +IL+CS+ I+GIKT+VK
Sbjct: 805 GCIAQTAMPVFETRESEIEGFIKCEILKCSS--------------------IFGIKTMVK 844
Query: 799 SYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWD 858
SYLPVKDAH+R GIDDLL ILK++L +GE+S+DIESS+VDKAHLRLA+AKA+LRL+R WD
Sbjct: 845 SYLPVKDAHLRLGIDDLLEILKNILLFGEISKDIESSAVDKAHLRLAAAKAILRLARHWD 904
Query: 859 HKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFE 918
HKIPV VFHLTLRT E SFPQAKKLFLSKVHQY+KDRLLDAKYACAF F I S+ EFE
Sbjct: 905 HKIPVGVFHLTLRTSESSFPQAKKLFLSKVHQYIKDRLLDAKYACAFSFNIVGSQPSEFE 964
Query: 919 EEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVK 978
E+K NL DIIQM+HQ KARQ+S QSDA+S A YPE+I+PYLVH AHHSCPDIDECKDVK
Sbjct: 965 EDKHNLGDIIQMYHQAKARQLSTQSDASSLA-YPEFILPYLVHALAHHSCPDIDECKDVK 1023
Query: 979 AFELVYCRLYFIVSMLIHKDEDVKSEAS---NKESISVIISIFRSIKCSEDIVDAAKSKN 1035
AFE +Y +L+ +SML+H DED K+EA KE IS IISIF+SIK SEDIVDAAKSKN
Sbjct: 1024 AFEPIYWKLHIFLSMLVHGDEDTKAEAGADKEKEGISAIISIFQSIKLSEDIVDAAKSKN 1083
Query: 1036 SHAICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDDSLASERQTWLADES 1095
SHA+CDLGLSI KRL + +D+ QG+ SS++LP LYK EKKEGDDS+ASE QTWLADE
Sbjct: 1084 SHALCDLGLSIIKRLVQKQDDVQGLTSSITLPPILYKLCEKKEGDDSVASEGQTWLADEX 1143
Query: 1096 VLTHFESLKLETHEVVGSEIARHEALDDLEKDGNEVPLGKMIQQLKSQGAKGGKAKKKKS 1155
VLTHFESLKLET+ +V E ++B ++DGNE+PLGKMI++LKS+G K K K KKS
Sbjct: 1144 VLTHFESLKLETNGMVDEE----GVINBNDRDGNELPLGKMIKRLKSRGTKSRKVKNKKS 1199
Query: 1156 SPAEVKGTENDVDILQMVREINLDNLGVLNKFESSNGHKHFPSKQIKVDLENEEIKKRKA 1215
SPA+ K ENDVDIL+MVREIN D +G+ +KFESSNGH++ ++ K+ ++E+ K+R++
Sbjct: 1200 SPAKKKHAENDVDILKMVREINFDAMGMSSKFESSNGHEYSSHRKSKMGQKHEKKKRRRS 1259
Query: 1216 TDVTSFPVPKRRRSLSAHGGFRTPKSNSKAPLRASGGGSHHAGVSSFQSIDMDDDI-SES 1274
T+VT VPKRRRS SA P+S SK +RA H AGVSSFQS DMD ++ ++S
Sbjct: 1260 TEVTPVTVPKRRRSSSAKSSL--PRSASKGSVRALRDNLHQAGVSSFQSTDMDSEVHTDS 1317
Query: 1275 EVKISTKKKKFTSNESDSFASRFQGSRSFSSKRKGKSADLGHDNEADEVGEADEGDLKNS 1334
E K+S K ESD S F+ + +F SKRKGK +D G ++EA VGE + DL+
Sbjct: 1318 EDKVSALKNIGEPAESDLLVSCFRRNSNFLSKRKGKGSDKGDNDEARIVGEDXDHDLRKP 1377
Query: 1335 DMLS-----------KSPVGSAKKRKRRSIAGLAKCTTKNAGVNIEDLIGYRIKVWWPMD 1383
++ KSP GS KKRKRRSIAGLAK T+K + DLI RIKVWWPMD
Sbjct: 1378 NVPMETDKIHTASNVKSPTGSTKKRKRRSIAGLAKSTSKEGRSHAADLIDCRIKVWWPMD 1437
Query: 1384 KQFYEGTIKSYDPIKKKHVILYDDEDVEVLRLDKERWELLDNGRKPTKKSKSNSLKHASL 1443
KQFYEG +KSYDP +KHV+LYDD DVEVLRL +ERWEL++N KP K K NS K
Sbjct: 1438 KQFYEGXVKSYDPKARKHVVLYDDGDVEVLRLARERWELVENVAKPAK--KLNSSKTPPS 1495
Query: 1444 IQVSSGKKNKLSGGARQNKKSMKD-----KGKRTPKKSLKDRPKFA----SKSYFSEDED 1494
VS+ +KNK G++QNKK +K +GKRTP+K+LK K + + F E E
Sbjct: 1496 KGVSADQKNKFLNGSQQNKKPIKSSSSKVRGKRTPRKNLKHVEKAGLESNTATEFCEVES 1555
Query: 1495 SEKTDVSDPKPTTVSKVLETNSGDSQGKRADMEDENLTDKEESDKEFKLISEERDVEDTE 1554
+DVS+P+P +SKV + NSGDS+ K + ++ LT EESDKE K +SE + VED E
Sbjct: 1556 RGSSDVSNPEPNAMSKVEDMNSGDSEEKLNERSEKGLTGGEESDKEEKSVSEGKQVEDKE 1615
Query: 1555 GNLNGEDESDEVDKMDSEEKPAEEVGSVPQDEK---------SDEEDKEEAESSKGSREE 1605
+ +ES++ +K SE +P E+ + QD + S+E + EE++ S EE
Sbjct: 1616 KRPSDTEESEKEEKPYSEGRPVEDKEGICQDAQESPEKKESYSEEREPEESKRDSPSGEE 1675
Query: 1606 ANEDGKSDSEGNEEINGDGSSPMNPEKSQNELPKPVDADDAEISDDEPL 1654
AN++ +SDSE + N + S+P + +KS + P + +DA+ SDDEPL
Sbjct: 1676 ANKEEQSDSEETQAENLE-SNPTDXDKSSKKTSDPSNTEDAKNSDDEPL 1723
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585406|ref|XP_002533398.1| androgen induced inhibitor of proliferation (as3) / pds5, putative [Ricinus communis] gi|223526757|gb|EEF28984.1| androgen induced inhibitor of proliferation (as3) / pds5, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356522079|ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224139450|ref|XP_002323118.1| predicted protein [Populus trichocarpa] gi|222867748|gb|EEF04879.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356564452|ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449443672|ref|XP_004139601.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356557993|ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224089565|ref|XP_002308759.1| predicted protein [Populus trichocarpa] gi|222854735|gb|EEE92282.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356532370|ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|186530158|ref|NP_001119390.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gi|332008170|gb|AED95553.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1670 | ||||||
| TAIR|locus:2169058 | 1607 | AT5G47690 [Arabidopsis thalian | 0.734 | 0.762 | 0.639 | 0.0 | |
| UNIPROTKB|F1N7G8 | 1449 | PDS5B "Uncharacterized protein | 0.312 | 0.360 | 0.274 | 1.3e-64 | |
| RGD|1307094 | 1333 | Pds5a "PDS5, regulator of cohe | 0.416 | 0.521 | 0.251 | 3.5e-64 | |
| UNIPROTKB|Q5F3U9 | 1412 | PDS5B "Sister chromatid cohesi | 0.312 | 0.369 | 0.276 | 3.5e-64 | |
| UNIPROTKB|F1P3B8 | 1446 | PDS5B "Sister chromatid cohesi | 0.312 | 0.360 | 0.276 | 5.3e-64 | |
| UNIPROTKB|Q29RF7 | 1337 | PDS5A "Sister chromatid cohesi | 0.416 | 0.519 | 0.251 | 1.5e-63 | |
| ZFIN|ZDB-GENE-091217-2 | 1415 | pds5b "PDS5, regulator of cohe | 0.314 | 0.371 | 0.272 | 1.5e-63 | |
| MGI|MGI:2140945 | 1446 | Pds5b "PDS5, regulator of cohe | 0.312 | 0.360 | 0.272 | 2.8e-63 | |
| UNIPROTKB|Q5U241 | 1464 | pds5b-b "Sister chromatid cohe | 0.312 | 0.356 | 0.268 | 4.2e-63 | |
| UNIPROTKB|F1Q0Z0 | 1447 | PDS5B "Uncharacterized protein | 0.312 | 0.360 | 0.274 | 5.8e-63 |
| TAIR|locus:2169058 AT5G47690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4065 (1436.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 789/1234 (63%), Positives = 964/1234 (78%)
Query: 23 QQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPE 82
++AA CLSEL QSPP ++L+++QPFL+A+++P +L HQDKDVKLLVA+C+ EITRITAPE
Sbjct: 31 KEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDVKLLVASCVSEITRITAPE 90
Query: 83 APYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNE 142
APYSD+++KDIFQLIV F+GL D GPSFGRRV+ILET+AKYRSCVVMLDLECD+LV E
Sbjct: 91 APYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKE 150
Query: 143 MYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDT---ARR 199
+++TF VA DDHPE V SSMQ IMIVLLEESED+QE LL+ILLS LGRN++D ARR
Sbjct: 151 VFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARR 210
Query: 200 LAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYL 259
LAM VIE CA K+E+ IKQFL+SSMSGDSR S IDYHEVIYD+YRC+PQ LSGV PYL
Sbjct: 211 LAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQIDYHEVIYDLYRCAPQALSGVAPYL 270
Query: 260 TGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHV 319
TGELL D+L+TRLK VGLVG+LF++PG +E+F S+F EFLKRLTDR+V VRM++L+H+
Sbjct: 271 TGELLADKLETRLKVVGLVGELFSLPGRVISEEFDSIFLEFLKRLTDRVVEVRMAILDHI 330
Query: 320 KSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAE 379
K CLL+DP RA+A QI++ALCDRLLD+DEN+RKQVVAVICDV+ AL SIPV+T+KLVAE
Sbjct: 331 KDCLLSDPLRAEASQIISALCDRLLDYDENIRKQVVAVICDVSVSALTSIPVDTMKLVAE 390
Query: 380 RLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIE 439
RLRDK++LVK YTMERL ++FR CLR +G ++ +F WIPGKILRCLYDKDF SDTIE
Sbjct: 391 RLRDKAILVKTYTMERLTELFRVYCLRCADGKVDTGDFNWIPGKILRCLYDKDFRSDTIE 450
Query: 440 SVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMH 499
+LC SLFP+ FSV+D+V+HW++IFSGFD++E KA EKILEQ+QR+QQEMQRYLS++Q
Sbjct: 451 YILCSSLFPSDFSVRDKVKHWIQIFSGFDKVETKAFEKILEQRQRIQQEMQRYLSIKQTQ 510
Query: 500 QDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQ 559
Q DAPEIQKKILF FRVMSR+F++P K E+NFLILDQLKDAN+WKIL NLLD NTS Q
Sbjct: 511 QTADAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANIWKILTNLLDPNTSITQ 570
Query: 560 AFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQS 619
A RDD+LKIL KH LYDFLSTLS+KCSYLLF+KE+VKEIL EV+ +KSS N +Q
Sbjct: 571 ASRIRDDMLKILSEKHSLYDFLSTLSIKCSYLLFSKEYVKEILAEVSVRKSSKNTLGIQP 630
Query: 620 CMDILGILARFSPLLLGGTXXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSV 679
CMD LG+LA F P L G ++KEG L +LAKAGGTIRE L +SSV
Sbjct: 631 CMDFLGLLACFCPSLFDGAEEELISFLKDDDEMMKEGTLKILAKAGGTIRENLIVLASSV 690
Query: 680 DLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLG 739
DLLLER+C+EG+R+QAKYAVHALA+ITKDDGLKSLSVLYKRLVDMLE+K + PAVLQ LG
Sbjct: 691 DLLLERICVEGNRKQAKYAVHALASITKDDGLKSLSVLYKRLVDMLEDKRYQPAVLQCLG 750
Query: 740 CIAQTAMPVFETRXXXXXXXXXXXXLRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKS 799
CIAQ AMPV+ETR L+ ++ +D K WDD+SE+C LKIYGIKTLVKS
Sbjct: 751 CIAQIAMPVYETRESEVVEFIRSKILKLKSETVDDKKLSWDDKSEICQLKIYGIKTLVKS 810
Query: 800 YLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDH 859
YLP KDA +R G+DDLLGILK++LS+GE+SED+ESSSVDKAHLRLA+AKAVLRLSR WD
Sbjct: 811 YLPFKDAQLRAGVDDLLGILKNILSFGEVSEDLESSSVDKAHLRLAAAKAVLRLSRHWDD 870
Query: 860 KIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEE 919
KIP+++FHLTL+TPEI FP AKK+FL KVHQYVKDR+L+ KYAC+FLF IT S E EE
Sbjct: 871 KIPIEIFHLTLKTPEIPFPTAKKIFLGKVHQYVKDRVLEMKYACSFLFDITGSNVLESEE 930
Query: 920 EKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 979
+K NLADIIQ +Q K R+IS Q+DANS YP +I+PYLVH AHHSCPD+++CKDVK
Sbjct: 931 DKHNLADIIQHSYQTKVRKISAQTDANSVTLYPHHILPYLVHALAHHSCPDVEKCKDVKE 990
Query: 980 FELVYCRLYFIVSMLIHKDEDVKSEASNKEXXX--XXXXXXXXXKCSEDIVDAAKSKNSH 1037
+E++Y +LY I+SML+HK+ED K+E +KE K SED+ DA KSKNSH
Sbjct: 991 YEMIYRQLYLIISMLLHKEEDGKTEDIDKEREYVPTIILIFHSIKQSEDVTDATKSKNSH 1050
Query: 1038 AICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDDSLASERQTWLADESVL 1097
AIC+LGLSI L++ E + QG + VSLP TLYKP EK EGD S E + WLADE+VL
Sbjct: 1051 AICELGLSIINHLTQKEPDLQGEITPVSLPPTLYKPSEKVEGDKSQVGEEKLWLADETVL 1110
Query: 1098 THFESLKLETHE--VVGSEIARHEALDDLEKDGNEVPLGKMIXXXXXXXXXXXXXXXXXX 1155
HF +LKLE+H V + + +E + D E DGNE+PLGK++
Sbjct: 1111 LHFRALKLESHADASVIPQTSENEVMIDGESDGNEIPLGKIVERLRAQGTKTRKGKKNKS 1170
Query: 1156 XXXEVKGTENDVDILQMVREINLDNLGVLNKFESSNGHKHFPSKQIKVDLENEEIKKRKA 1215
E + +NDVD+L+MVREINLD+L +L+KFESSNGHKH PS++ ++ +++ KR
Sbjct: 1171 VPAEDENGKNDVDVLKMVREINLDHLQMLDKFESSNGHKHSPSERAEICQRDQKGNKRNV 1230
Query: 1216 TDVTSF-PVPKRRRSLSAHGGFRTPKSNSKAPLR 1248
D TS VPKRRRS S H ++ S K L+
Sbjct: 1231 GDATSVVSVPKRRRSSSGHSPYKFSNSGPKVQLK 1264
|
|
| UNIPROTKB|F1N7G8 PDS5B "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1307094 Pds5a "PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5F3U9 PDS5B "Sister chromatid cohesion protein PDS5 homolog B" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P3B8 PDS5B "Sister chromatid cohesion protein PDS5 homolog B" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q29RF7 PDS5A "Sister chromatid cohesion protein PDS5 homolog A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-091217-2 pds5b "PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2140945 Pds5b "PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5U241 pds5b-b "Sister chromatid cohesion protein PDS5 homolog B-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1Q0Z0 PDS5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1670 | |||
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 2e-06 | |
| pfam05793 | 528 | pfam05793, TFIIF_alpha, Transcription initiation f | 4e-06 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 2e-05 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 3e-05 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 9e-05 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 1e-04 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 1e-04 | |
| pfam09507 | 427 | pfam09507, CDC27, DNA polymerase subunit Cdc27 | 1e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 2e-04 | |
| PRK05901 | 509 | PRK05901, PRK05901, RNA polymerase sigma factor; P | 2e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 3e-04 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 4e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 5e-04 | |
| PRK13108 | 460 | PRK13108, PRK13108, prolipoprotein diacylglyceryl | 5e-04 | |
| PLN02976 | 1713 | PLN02976, PLN02976, amine oxidase | 5e-04 | |
| TIGR01651 | 600 | TIGR01651, CobT, cobaltochelatase, CobT subunit | 5e-04 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 6e-04 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 7e-04 | |
| pfam05793 | 528 | pfam05793, TFIIF_alpha, Transcription initiation f | 0.001 | |
| COG4547 | 620 | COG4547, CobT, Cobalamin biosynthesis protein CobT | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| COG4547 | 620 | COG4547, CobT, Cobalamin biosynthesis protein CobT | 0.003 | |
| PLN02967 | 581 | PLN02967, PLN02967, kinase | 0.003 | |
| COG5406 | 1001 | COG5406, COG5406, Nucleosome binding factor SPN, S | 0.003 | |
| pfam04615 | 728 | pfam04615, Utp14, Utp14 protein | 0.004 |
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-06
Identities = 22/151 (14%), Positives = 38/151 (25%), Gaps = 18/151 (11%)
Query: 1503 PKPTTVSKVLETNSGDSQGKRADMEDENLTDKEESDKEFKLISEERDVEDTEGNLNGEDE 1562
P P T SG A+ E+ +E + +E +
Sbjct: 46 PAPPA-----PTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSG----SG 96
Query: 1563 SDEVDKMDSEEKPAEEVGSVPQDEKSDEEDKEEAESSKGSREEANEDGKSDSEGNEEING 1622
S+ V + E + ++ E+ +S E
Sbjct: 97 SESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPE--- 153
Query: 1623 DGSSPMNPEKSQNELPKPVDADDAEISDDEP 1653
+ S N+ P E S +EP
Sbjct: 154 ------SHNPSPNQQPSSFLQPSHEDSPEEP 178
|
Length = 413 |
| >gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27 | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|215527 PLN02976, PLN02976, amine oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|130712 TIGR01651, CobT, cobaltochelatase, CobT subunit | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) | Back alignment and domain information |
|---|
| >gnl|CDD|226920 COG4547, CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226920 COG4547, CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|215521 PLN02967, PLN02967, kinase | Back alignment and domain information |
|---|
| >gnl|CDD|227693 COG5406, COG5406, Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >gnl|CDD|218177 pfam04615, Utp14, Utp14 protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1670 | |||
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 100.0 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 99.73 | |
| PF09465 | 55 | LBR_tudor: Lamin-B receptor of TUDOR domain; Inter | 98.94 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.66 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 98.6 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.24 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 98.17 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.15 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.01 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 97.76 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 97.45 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.42 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.36 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 97.25 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 97.24 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 97.1 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 96.97 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 96.97 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.89 | |
| cd04508 | 48 | TUDOR Tudor domains are found in many eukaryotic o | 96.76 | |
| smart00743 | 61 | Agenet Tudor-like domain present in plant sequence | 96.72 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 96.7 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 96.64 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 96.63 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 96.6 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 96.59 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 96.58 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.48 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 96.46 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 96.45 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 96.2 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 96.17 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 95.95 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 95.78 | |
| KOG4675 | 273 | consensus Uncharacterized conserved protein, conta | 95.7 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 95.7 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 95.67 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 95.51 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 95.4 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 95.28 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 95.26 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 95.12 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 94.77 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 94.64 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 94.47 | |
| PF09038 | 122 | 53-BP1_Tudor: Tumour suppressor p53-binding protei | 94.39 | |
| KOG2011 | 1048 | consensus Sister chromatid cohesion complex Cohesi | 94.38 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 94.18 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 94.05 | |
| COG5098 | 1128 | Chromosome condensation complex Condensin, subunit | 94.05 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 93.77 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 93.77 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 93.68 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 93.53 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 93.34 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 93.32 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 93.21 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 92.52 | |
| COG5098 | 1128 | Chromosome condensation complex Condensin, subunit | 91.7 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 91.63 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 91.46 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 91.11 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 90.94 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 90.73 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 90.53 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 90.38 | |
| PF06003 | 264 | SMN: Survival motor neuron protein (SMN); InterPro | 90.12 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 89.99 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 89.98 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 89.67 | |
| PF13001 | 501 | Ecm29: Proteasome stabiliser; InterPro: IPR024372 | 89.55 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 88.69 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 88.53 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 88.32 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 88.03 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 87.61 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 87.49 | |
| PF12765 | 42 | Cohesin_HEAT: HEAT repeat associated with sister c | 86.96 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 86.74 | |
| KOG2011 | 1048 | consensus Sister chromatid cohesion complex Cohesi | 86.72 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 86.51 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 84.17 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 84.06 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 83.13 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 82.96 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 82.34 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 82.23 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 81.04 | |
| PF12231 | 372 | Rif1_N: Rap1-interacting factor 1 N terminal; Inte | 80.78 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 80.38 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 80.1 |
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-135 Score=1310.61 Aligned_cols=1061 Identities=30% Similarity=0.461 Sum_probs=893.5
Q ss_pred eehhhhHHHHHHHHHHHHHHHhhcCCCCchhhHHhHHHHHHHhcchhhhcCCCcchHHHHHHHHHHHHhhcCCCCCCChh
Q 000321 9 LLLGNVLHFFLLNLQQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDD 88 (1670)
Q Consensus 9 ~~~~~~~~~LlkrLk~l~~~Ls~~dQ~~~~~~~~sl~~~~~~Lv~~~LL~HkD~~Vra~vAcCLadIlRI~APdaPytd~ 88 (1670)
++--+.+++||+||++|++||.+++|++ .+++++.|++.+|+++.||+|+|+|||+|||||++||||||||+|||++.
T Consensus 13 ~~~~~s~~ell~rLk~l~~~l~~~~qd~--~~~~~~~pl~~~l~~~~~L~h~d~dvrllvacCvseilRi~aPeaPy~~~ 90 (1266)
T KOG1525|consen 13 SLNPISKDELLKRLKKLANCLASLDQDN--LDLASLLPLADHLIKDFLLKHKDKDVRLLVACCVSEILRIYAPEAPYTDE 90 (1266)
T ss_pred ccCcccHHHHHHHHHHHHHHHhhcccCc--hhHHHHHHHHHHHhhHHHhcCCCcChhHHHHHHHHHHHHHhCCCCCCcHH
Confidence 3444567899999999999999999996 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHhhhhheeeccCCchHHHHHHHHHHHhhhcCCChhhHHHHHHHHHH
Q 000321 89 VLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMI 168 (1670)
Q Consensus 89 ~LkdIF~lfi~qf~~L~d~~~p~f~q~~~LLe~La~vks~vl~~DL~~~~Li~~lF~~ff~~v~~~~~~~V~~~m~~IL~ 168 (1670)
||+|||++|++||.||+|+.+|||.|||||||+||.||.|++|.|.+|++++.+||++||++++.+|+.+|.+ |.+||+
T Consensus 91 ~lkdIf~~~~~q~~gL~d~~sp~f~r~~~lletl~~~k~~l~~~l~d~~e~~~~~f~~f~d~~~~~~~~~v~~-~~~i~~ 169 (1266)
T KOG1525|consen 91 QLKDIFQLILSQFSGLGDVESPYFKRYFYLLETLAKVKFCLLMLLEDCQELVHELFRTFFDLARKGHPKKVFN-MLDIAI 169 (1266)
T ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhHHHheeeccchHHHHHHHHHHHHHHHhccccHHHHH-HHHHHH
Confidence 9999999999999999999999999999999999999955555555599999999999999999999999999 999999
Q ss_pred HHhcccccccHHHHHHHHHHhcCCCc---HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CCCCCcchHHHHHHHH
Q 000321 169 VLLEESEDIQEDLLVILLSALGRNKN---DTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDS-RPGHSHIDYHEVIYDV 244 (1670)
Q Consensus 169 ~vIeEse~vp~~vLd~IL~~l~~~~~---~~a~~lA~~v~~~~~dkL~~~I~qyf~~il~~~~-~~~~~~~~~h~Li~eL 244 (1670)
.+|.|.+.||.++|++||.+|+.++. ..|++||..+++.|++.+++.+++||++.+.++. ..+....++|++|++|
T Consensus 170 ~li~e~d~v~~e~L~~ll~~lv~~~~~~~~~a~~la~~li~~~a~~~~~~i~~f~~~~~~~~~s~~~~~~~~~he~i~~L 249 (1266)
T KOG1525|consen 170 MLITEEDTVQSELLDVLLENLVKPGRDTIKEADKLASDLIERCADNLEDTIANFLNSCLTEYKSRQSSLKIKYHELILEL 249 (1266)
T ss_pred HHHHhhccchHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHhhhhhchhHHHHHHHHHhhccccccchhhHHHHHHHHH
Confidence 99999999999999999999976543 3999999999999999999999999999888764 4456677899999999
Q ss_pred HhhCchhhhhhhhhhcccccCCChHHHHHHHHHHHHhhcCCCCCchhhcHHHHHHHHhhhcCCChhHHHHHHHHhHHHHh
Q 000321 245 YRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLL 324 (1670)
Q Consensus 245 ~~~~P~lL~~ViP~Le~EL~sed~~~Rl~At~llG~mfs~~~~~~~~~y~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~ 324 (1670)
|+++|++|++|||||++||+++++.+|+.||.++|+||+.+++.++.+|+++|.+||+||+|++++||++||+++++||.
T Consensus 250 ~~~~p~ll~~vip~l~~eL~se~~~~Rl~a~~lvg~~~~~~~~~l~~~~~~~~~~fl~r~~D~~~~vR~~~v~~~~~~l~ 329 (1266)
T KOG1525|consen 250 WRIAPQLLLAVIPQLEFELLSEQEEVRLKAVKLVGRMFSDKDSQLSETYDDLWSAFLGRFNDISVEVRMECVESIKQCLL 329 (1266)
T ss_pred HHhhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhcchhhhcccchHHHHHHHHHhccCChhhhhhHHHHhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHhhhCCChhHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHhhccCChhHHHHHHHHHHHHHHH-H
Q 000321 325 TDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRG-C 403 (1670)
Q Consensus 325 ~~p~~~~~~eii~~L~~rL~D~DEkVR~aaVkai~~la~~~l~~Vs~elL~~laeR~RDKK~~VR~eAm~~La~LY~~-~ 403 (1670)
+||+...+..+..+++.|+.|++++||..||.++|+++.+.+..++. +|+.|+||+||||+.||++||++|+++|+. |
T Consensus 330 ~~~~~~~~~~~~~~l~~~~~D~~~rir~~v~i~~~~v~~~~l~~~~~-ll~~~~eR~rDKk~~VR~~Am~~LaqlYk~~~ 408 (1266)
T KOG1525|consen 330 NNPSIAKASTILLALRERDLDEDVRVRTQVVIVACDVMKFKLVYIPL-LLKLVAERLRDKKIKVRKQAMNGLAQLYKNVY 408 (1266)
T ss_pred cCchhhhHHHHHHHHHhhcCChhhhheeeEEEEEeehhHhhhhhhHH-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999999999 999999999999999999999999999996 5
Q ss_pred hhhccCCCcchhccccchHHHhhhhccCCCCc-hhHHHHhhccCcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 000321 404 CLRNFNGSINQNEFEWIPGKILRCLYDKDFGS-DTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQK 482 (1670)
Q Consensus 404 ~~~~~~~~~~~~~~~wIPs~IL~~~Y~nD~~~-~lVE~vL~e~LlP~~~~~~~R~~~ll~l~~~LD~~~~kal~~il~~k 482 (1670)
|..++.+...+..|.|||++||++||.++.+. .+||++|+++|+|+++++++|+++|+++|.+||..+.++|..|+++|
T Consensus 409 ~~~~~~~k~~t~~~swIp~kLL~~~y~~~~~~r~~vE~il~~~L~P~~l~~q~Rmk~l~~~l~~~D~~a~kaf~~i~~~q 488 (1266)
T KOG1525|consen 409 CLRSAGGKEITPPFSWIPDKLLHLYYENDLDDRLLVERILAEYLVPYPLSTQERMKHLYQLLAGLDLNAHKAFNEILKRQ 488 (1266)
T ss_pred HhhccCcccccccccccchhHHhhHhhccccHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcccHhhhhHHHHHHHHH
Confidence 55666777888999999999999999998764 48999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhh--ccHHHHHHHHHHhcCCCCHHHH
Q 000321 483 QRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQA 560 (1670)
Q Consensus 483 ~~l~~~~~~~l~l~~~~~~~d~~ei~~kl~~~I~~Ls~~FPDp~Ka~~~L~kf~kL--nD~RiykLLk~~id~~td~~t~ 560 (1670)
.++|.+++.||.+++..+.++ .++++...|..++..||||.......++|++. .+..+...+..+..+..+|.++
T Consensus 489 ~~ls~~vr~~I~~~k~~~~d~---~~k~i~~~i~~i~~~lpD~~s~~~~~~~f~~~L~~~~~~~s~~~~L~~~~~~C~~l 565 (1266)
T KOG1525|consen 489 SRLSEEVRDYITLSKTPNTDD---SMKKIFSKIVKISENLPDPSSRSYDSMKFADVLETLAKVRSCLVSLDSPSISCKEL 565 (1266)
T ss_pred HHHHHHHHHHhccccCCCccH---hHHHHHHHHHHHHHhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 999999999999988765433 77788888999999999999999999999653 4678888999999998888877
Q ss_pred HHHHHHHHHHhc----CCCchHHHHHHHHHhhhccccCh-hHHHHHHHHHHhhcc-------cch--hhhHHHHHHHHHH
Q 000321 561 FTGRDDLLKILG----AKHRLYDFLSTLSMKCSYLLFNK-EHVKEILLEVAAQKS-------SAN--AQFMQSCMDILGI 626 (1670)
Q Consensus 561 ~~a~~ELlkkL~----~~~~l~e~l~~Ll~R~S~li~Nk-s~V~~LL~~v~~~~~-------~~~--~~~~~~a~eLL~~ 626 (1670)
.-.+++++.+++ .++.+..+.+.|+.|..++.+.. +.+..++........ .++ .........||.+
T Consensus 566 ~~~v~~~l~e~~~~~~s~nlF~~~~~~li~~I~~v~~di~~s~~~~ik~~~~~i~~~~~~l~e~v~~~~a~kl~~~lle~ 645 (1266)
T KOG1525|consen 566 LITVKEILFELGRKKQSKNLFSSMEKELIERIAEVSLDILESISALIKLNNIVIAEVSLLLLEGVLSEKALKLKKYLLEA 645 (1266)
T ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHHhcchhhhhHHHHHHHHhhhhhhHHHHHhhcccccchhhHHhHHHHHHHH
Confidence 555566665555 34557788899999999988887 777777765432111 111 1223456789999
Q ss_pred HHhhCCcCcccc--HHHHHHHHhhccccchHHHHHHHHHhhcchhhhhhcccchHHHHHHHHhhcCChHHHHHHHHHHHh
Q 000321 627 LARFSPLLLGGT--EEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAA 704 (1670)
Q Consensus 627 IS~~~P~lFk~~--v~~Li~lL~~~~~~~~~~aLkiLak~~k~~~e~~~~~~s~l~~~L~~lal~Gtp~qAKyAvr~Laa 704 (1670)
+|..+|.+|... +..++..+.+..+...+.+|+.+...|..+....+...+.+...+.+++..|+|.|||+|++|+.+
T Consensus 646 ls~~~~~~~~~s~~v~~i~~~~~~~~~~~~~~vLk~~~~~~~~~~~~~~si~~~~~~~~~~~~~~g~~~q~k~~~~~i~~ 725 (1266)
T KOG1525|consen 646 LSSIHPDLFKYSESVLSILEKLFSEPDVVAPVVLKKLESQGKKIEVEAPSILSTLSRVLAKKELSGTPEQAKLAKRCIKA 725 (1266)
T ss_pred hhhcCcchhhhhHHHHHHHHHhccchhhhhHHHHHHHHhccccccccchhhhcchhhhhhHHHHcCCcchhHHHhhhhhH
Confidence 999999998876 466666666666667788999998888544444455667789999999999999999999999998
Q ss_pred hcCCCccchHHHHHHHHHHhhhhc-----CCCchHHHHHHHHHhhccccccc-chHHHHHHHHHhhhccccccCCC-CCC
Q 000321 705 ITKDDGLKSLSVLYKRLVDMLEEK-----THLPAVLQSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRND-TKA 777 (1670)
Q Consensus 705 ~~~~~~~~~~~~L~~~L~~~L~~~-----~~l~t~L~sL~~Iaq~aP~vfe~-~~~eI~~fiik~ILl~~~~~~~~-~~~ 777 (1670)
+...... .+..++..+.+.+... .++.+.+.+||+|+.+.|..|.+ ....+..||+|+++..++.+++. ...
T Consensus 726 ~~~s~~~-~l~q~~~~~~d~l~~~~~~~~e~~~~~i~~lgei~~~~p~~~~~~~k~~~~~~IvK~~~~~~~~~~e~~~~~ 804 (1266)
T KOG1525|consen 726 ILQSKFC-KLKQTFEEIKDNLLEDLTSELEGLRTPIVTLGEIFLDLPSQFLDPLKSDVAKFIVKKVLSNDDSPGEKNKSK 804 (1266)
T ss_pred Hhhhhhh-HHHHHhhhhHHHHhhhhhhhhhccccchhhhhhHhhhccHhhcchhhhhhHHHHHHHHhcCCCccccccCcc
Confidence 8876422 3445677777776544 49999999999999999966655 47889999999998888888775 667
Q ss_pred CCCCc----hhhHHHHHHHHHHHHHhhcCCCcccc--ccchHHHHHHHHHhh-ccCccccCCCCChhhHhHhHHHHHHHH
Q 000321 778 CWDDR----SELCLLKIYGIKTLVKSYLPVKDAHI--RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAV 850 (1670)
Q Consensus 778 ~W~d~----se~~~aKi~aLK~Lvn~ll~~~~~~~--~~~i~~ll~lL~~il-~~GEl~~~~~tp~~~ksrLRLaAa~~l 850 (1670)
.|++. +..+.+|+++++++++||++...+.- +-.+...+.+|..++ +.|++..+..+|..++++||+.|+.++
T Consensus 805 ~~~P~~~~~~p~~~~k~~a~~L~~~~l~~~~~d~~~~e~s~~~~~~~L~~ll~~~gdl~~~~~~~~~~~sklr~~a~~~i 884 (1266)
T KOG1525|consen 805 EWLPSDKLLSPNTSLKVLAIKLLVRRLLDLEEDKEKDELSTPRSFRLLSKLLNSEGDLTEQNRDPKSDQSKLRLTAKITI 884 (1266)
T ss_pred ccCCcccccchhhhhHHHHHHHhhhhccccccCcchhhhcchhHHHHHHHHHhhcCCCCcccCCcchhhhhhhhhhhhee
Confidence 78662 45688899999999999999876421 111112566777765 699999998899999999999999999
Q ss_pred HHhhhc--cCCCCCHHHHHHHhhcccCCchhHHHHHHHHHHHhHhcCCCchhhHHHHHhhhccCCCCchHHHHHHHHHHH
Q 000321 851 LRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADII 928 (1670)
Q Consensus 851 LKLAr~--~d~~I~~d~f~l~~l~~qD~~~~VR~~Fl~KL~kyL~~~~L~~rY~~lf~laa~a~ep~~~~e~K~~l~~~I 928 (1670)
||||.. +..++.++.|..+.+.++|++++||..|+.||++++....+|.-|++.|.+++.+..... ..-+....+-.
T Consensus 885 lKl~~~~~~~e~~~~~~~~~~~~~i~de~~~vR~~f~~kl~k~l~~i~lp~~~~a~~~l~~~d~~~~~-~~~~~~~~t~~ 963 (1266)
T KOG1525|consen 885 LKLASEKSYHEFINAEQYEKLILLISDECLQVRLVFLLKLHKGLSRIKLPLEYMAKFKLCAPDVSKEL-LANKREEETKN 963 (1266)
T ss_pred eecccccchhccCCHHHHHHHHHHhcCCchhHHHHHHHHccccccccccchhhhhHHHHhccchhhhh-hhHHHHhhhhc
Confidence 999976 578899999988888899999999999999999999999999999999988653211100 00011111111
Q ss_pred HHHHHHHHhhhhhccccccccCCchhhhHHHHhhccCCCCCCcchhhcHHHHHHHHHHHHHHHHHhhccCcccccccccc
Q 000321 929 QMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNK 1008 (1670)
Q Consensus 929 ~~~~~~r~r~~s~~s~~~~~~~~pEy~LprLIHLLAHH~~Pd~ee~~d~~a~~~~~~~L~F~L~~L~~~~~~~~~~~~~~ 1008 (1670)
..+++.+.....+.++. .....|||+.+|.+|++||| |++...+++..|-.+..++||.++.|... .
T Consensus 964 ~~~~r~~t~~e~~~s~~-~~~~~~e~V~~~~~~~la~d--~~~~~~edv~~l~~~ke~~~~vl~~l~~~----------~ 1030 (1266)
T KOG1525|consen 964 SASRREQTKFERATSDG-TLAHLPEYVGSYVIHLLAHD--PDFVKAEDVDSLSDLKECLWFVLEDLDEE----------N 1030 (1266)
T ss_pred chhhhhhhhhhhccCch-hhhhhhHHhhhhhhhhhccC--ccccccchhhhHHHHHHhHHHHHhhhhhh----------h
Confidence 22222233333333322 15688999999999999999 99998889999998899999999999532 1
Q ss_pred ccH--HHHHHHHHHhhcccccccc---ccCcchHHHHHHHHHHHHHHhc-cCCCCcccccccCCCccccCCCCCCCcccc
Q 000321 1009 ESI--SVIISIFRSIKCSEDIVDA---AKSKNSHAICDLGLSITKRLSR-MEDNSQGVFSSVSLPSTLYKPYEKKEGDDS 1082 (1670)
Q Consensus 1009 eNi--SlLy~La~rIKq~rDa~d~---~~S~nlY~LcDLAq~IIk~~a~-k~W~lqsyPGkV~LPs~LF~p~~s~~~~~a 1082 (1670)
+|+ .+.-.+.+-+++.+|...+ ..+..||+|||+|+.|+..... .+|...+|||+++||..+|.+..+. +
T Consensus 1031 ~n~~~~~~~~~~~~~~~~~d~~s~~d~~~~~kl~~l~d~a~~i~~sk~~~~s~~~tt~~~~~~lp~~~~~~~~~k----n 1106 (1266)
T KOG1525|consen 1031 ENNQHKFWKREKEEIKGSEDEESPDDVGDNIKLYTLCDLAQCIILSKSTKFSNSSTTSPGKLNLPALSFTSPKDK----N 1106 (1266)
T ss_pred ccchhHHHHHHHhhhhcchhhcCCcccCCCceeeeHHhHHHHHHhcccccccCCCCCCCccccCchhhhCCcchh----h
Confidence 232 2333344446667777643 3456799999999999997775 6799999999999999999998642 2
Q ss_pred cccccccccccchh
Q 000321 1083 LASERQTWLADESV 1096 (1670)
Q Consensus 1083 ~~~~~k~yLpde~~ 1096 (1670)
-...++|+|+++-
T Consensus 1107 -~~~~k~~i~e~~~ 1119 (1266)
T KOG1525|consen 1107 -FINNKIYIPEETE 1119 (1266)
T ss_pred -hccccccCCchhc
Confidence 2468999999943
|
|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09465 LBR_tudor: Lamin-B receptor of TUDOR domain; InterPro: IPR019023 The Lamin-B receptor is a chromatin and lamin binding protein in the inner nuclear membrane | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >cd04508 TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains | Back alignment and domain information |
|---|
| >smart00743 Agenet Tudor-like domain present in plant sequences | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG4675 consensus Uncharacterized conserved protein, contains ENT domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09038 53-BP1_Tudor: Tumour suppressor p53-binding protein-1 Tudor; InterPro: IPR015125 This domain consist of ten beta-strands and a carboxy-terminal alpha-helix | Back alignment and domain information |
|---|
| >KOG2011 consensus Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >PF06003 SMN: Survival motor neuron protein (SMN); InterPro: IPR010304 This family consists of several eukaryotic survival motor neuron (SMN) proteins | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3 | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF12765 Cohesin_HEAT: HEAT repeat associated with sister chromatid cohesion | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG2011 consensus Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF12231 Rif1_N: Rap1-interacting factor 1 N terminal; InterPro: IPR022031 This domain family is found in eukaryotes, and is typically between 135 and 146 amino acids in length | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 88.0 bits (217), Expect = 2e-17
Identities = 94/638 (14%), Positives = 201/638 (31%), Gaps = 138/638 (21%)
Query: 499 HQDGDAPEIQ---KKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNT 555
H D + E Q K IL F E+ F+ + + + D
Sbjct: 6 HMDFETGEHQYQYKDILSVF-------------EDAFV-----DNFDCKDVQ----DM-- 41
Query: 556 SFDQAFTGR--DDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEIL----------L 603
+ D ++ A TL K ++ ++ V+E+L +
Sbjct: 42 -PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV--QKFVEEVLRINYKFLMSPI 98
Query: 604 EVAAQKSSANAQFMQSCMDIL-GILARFSPLLLGGTEEELVNLLKEENEIIKEG---ILH 659
+ ++ S + D L F+ + + + L++ ++ ++
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV--SRLQPYLKLRQALLELRPAKNVLID 156
Query: 660 --------VLAKAGGTIREQ--------------LAATSSSVDLL--LERLCLEGSRRQA 695
+A L +S +L L++L +
Sbjct: 157 GVLGSGKTWVALD--VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 696 KYAVHALAAITKDDGLKS-LSVL-----YKR--LV-DMLEEKTHLPAVLQSLGCIAQTAM 746
+ H+ + +++ L L Y+ LV ++ A +L C +
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--NLSC--KI-- 268
Query: 747 PVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDA 806
+ TR ++ +F+ + + + + D + LLK + LP +
Sbjct: 269 -LLTTRFKQVTDFLSAAT-TTHISLDHHSMTLTPDEVKSLLLKYLDCRP---QDLPREVL 323
Query: 807 HIRPGIDDLLG-ILKSMLS---------YGEMSEDIESS--SVDKAHLR-LASAKAVLRL 853
P ++ ++ L+ +++ IESS ++ A R + +V
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 854 SRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESK 913
IP + L S + ++K+H+Y L++ K I
Sbjct: 384 ----SAHIPTILLSLIWFDVIKSDVM---VVVNKLHKY---SLVE-KQPKESTISI---- 428
Query: 914 SPE-FEEEKQNLADIIQMHHQM-KARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDI 971
P + E K L + +H + I D++ P Y+ Y HH +I
Sbjct: 429 -PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI--PPYLDQYFYSHIGHH-LKNI 484
Query: 972 DECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIIS----IFRSIKCSE-- 1025
+ + + F +V+ F+ + H + S ++ + I + E
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL 544
Query: 1026 --DIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVF 1061
I+D + IC + R++ M ++ +F
Sbjct: 545 VNAILDFLPKIEENLICSKYTDLL-RIALMAEDE-AIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1670 | ||||
| d2vglb_ | 579 | a.118.1.10 (B:) Adaptin beta subunit N-terminal fr | 2e-04 | |
| d2vglb_ | 579 | a.118.1.10 (B:) Adaptin beta subunit N-terminal fr | 0.004 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 3e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.001 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 0.004 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1670 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.51 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.39 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.38 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.26 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.06 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.85 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 98.67 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.57 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.56 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.32 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.05 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.61 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.44 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.34 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 97.31 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 96.76 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.62 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.61 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 96.41 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 96.4 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.14 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 96.03 | |
| d2d9ta1 | 60 | Tudor domain-containing protein 3, TDRD3 {Mouse (M | 95.76 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 95.13 | |
| d1mhna_ | 59 | Survival motor neuron protein 1, smn {Human (Homo | 95.03 | |
| d2diga1 | 55 | Lamin-b receptor {Human (Homo sapiens) [TaxId: 960 | 94.17 | |
| d2diqa1 | 97 | Tudor and KH domain-containing protein TDRKH {Huma | 92.37 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 90.21 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 90.16 | |
| d2hqxa1 | 90 | P100 co-activator, SND1 {Human (Homo sapiens) [Tax | 88.83 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 88.82 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 88.82 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 86.9 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 85.92 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 85.51 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 82.76 | |
| d1wgsa_ | 133 | Probable histone acetyltransferase MYST1 {Mouse (M | 81.01 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=3.8e-09 Score=80.04 Aligned_cols=364 Identities=13% Similarity=0.137 Sum_probs=210.2
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999986318999442587489999983201110589821379899999788751299999991589999999998216
Q 000321 23 QQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFS 102 (1670)
Q Consensus 23 k~l~~~Ls~~dQ~~~~~~~~sl~~~~~~Lv~~~LL~HkD~~Vra~vAcCLadIlRI~APdAPytd~~LkdIF~lfi~ql~ 102 (1670)
..+.+-+..+.++....+.+....+...|+. +|.-++.+||..+..||..+..- . ...++..+...++..+.
T Consensus 22 ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~--~L~D~~~~Vq~~A~k~l~~l~~~-~-----~~~~~~~l~~~L~~~l~ 93 (1207)
T d1u6gc_ 22 MATNDLMTELQKDSIKLDDDSERKVVKMILK--LLEDKNGEVQNLAVKCLGPLVSK-V-----KEYQVETIVDTLCTNML 93 (1207)
T ss_dssp HHHHHHHHHTSSSCCSCCTTHHHHHHHHHHH--HTTCSSHHHHHHHHHHHHHHHTT-S-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHH-C-----CHHHHHHHHHHHHHHHC
T ss_conf 9999999987230144576889999999999--96799879999999999999976-7-----68669999999999856
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHEEE--CCCC-CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf 99888998714699999999743141001--0688-3289999999999632499825199999999999960234453-
Q 000321 103 GLKDTGGPSFGRRVVILETLAKYRSCVVM--LDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ- 178 (1670)
Q Consensus 103 ~L~d~~~p~f~q~~~lLe~LA~vks~vli--~DL~-~~~Li~~lF~~ff~~v~~~~~~~V~~~m~~IL~~iIeEse~Ip- 178 (1670)
+.+...-.-....|..+- ..+.. ..-. ...+...+...+.+.........+.....+++..++.-....-
T Consensus 94 ---~~~~~~r~~~~~~L~~i~---~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~ 167 (1207)
T d1u6gc_ 94 ---SDKEQLRDISSIGLKTVI---GELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLV 167 (1207)
T ss_dssp ---CSSSHHHHHHHHHHHHHH---HHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCT
T ss_pred ---CCCHHHHHHHHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---896326599999999999---96632002311278899999999987634777789999999999999987567668
Q ss_pred ---HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCH
Q ss_conf ---8899999997137985789999999999965544-----79999999973159999988730377999999840730
Q 000321 179 ---EDLLVILLSALGRNKNDTARRLAMNVIEQCAGKL-----EAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQ 250 (1670)
Q Consensus 179 ---~~vLd~IL~~l~~~~~~~A~~lA~~ii~~~~dkL-----~~~I~qyf~~il~~d~~~~~~~~~~h~Li~eL~~~~P~ 250 (1670)
..++..++..+.... ..-+.-|...+..-+..+ ...+...+..+.... .......+-.++-.|.+..|.
T Consensus 168 ~~~~~il~~l~~~l~~~~-~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~--~~~~~~~~~~~l~~l~~~~~~ 244 (1207)
T d1u6gc_ 168 NFHPSILTCLLPQLTSPR-LAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKND--SMSTTRTYIQCIAAISRQAGH 244 (1207)
T ss_dssp TTHHHHHHHHGGGGGCSS-HHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTC--SSCSCTTHHHHHHHHHHHSSG
T ss_pred HHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHCCH
T ss_conf 779999999998808999-89999999999999987799879999999999870599--889999999999999987615
Q ss_pred HH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHH-------------------------
Q ss_conf 34----3112112012357776899999999998625999982100499999998-------------------------
Q 000321 251 IL----SGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFL------------------------- 301 (1670)
Q Consensus 251 lL----~~ViP~Le~EL~sdd~~~Rl~At~llG~mfs~~~s~~a~~y~~~w~~fL------------------------- 301 (1670)
.+ ..++|.+..-+..++.++|..|...+..+...-+..+...++.++...+
T Consensus 245 ~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~ 324 (1207)
T d1u6gc_ 245 RIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADG 324 (1207)
T ss_dssp GGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 46777999999999882586177789999999999986746544559999999999874073000346788776555401
Q ss_pred ------------HHHCCCCHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ------------30059993399999999698783199999--8678999998660797167999999999996532137
Q 000321 302 ------------KRLTDRIVAVRMSVLEHVKSCLLTDPSRA--DAPQILTALCDRLLDFDENVRKQVVAVICDVACHALN 367 (1670)
Q Consensus 302 ------------~R~~Dks~~VR~~~v~~~~~iL~s~p~~~--~~~eI~~~L~~rL~D~DEkVR~aaVkai~~la~~~l~ 367 (1670)
.-..|.+..||...+++...++.+.|... ...++.+.|..++.|.++.||.+++.++..+......
T Consensus 325 ~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~~~~l~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~~ 404 (1207)
T d1u6gc_ 325 GDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRP 404 (1207)
T ss_dssp -----------------CTTHHHHHHHHHHHHHHTTCCTTHHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 10135667888752201338999999999986898889999999999999999984598548999999999999973032
Q ss_pred CC----------------------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88----------------------9888999997603689369999999999999987
Q 000321 368 SI----------------------PVETVKLVAERLRDKSVLVKRYTMERLADIFRGC 403 (1670)
Q Consensus 368 ~V----------------------~~elL~~LaeR~RDKK~~VR~eAi~~La~LY~~~ 403 (1670)
.. -..++..+...++++...+|..++..+..+....
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~ 462 (1207)
T d1u6gc_ 405 VQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVL 462 (1207)
T ss_dssp C------------CCCHHHHHHHHTTHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 1255515488876302699999876999999999864886567888999999999972
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1mhna_ b.34.9.1 (A:) Survival motor neuron protein 1, smn {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2diqa1 b.34.9.1 (A:8-104) Tudor and KH domain-containing protein TDRKH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2hqxa1 b.34.9.1 (A:8-97) P100 co-activator, SND1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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