Citrus Sinensis ID: 000355
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1620 | 2.2.26 [Sep-21-2011] | |||||||
| Q55FJ0 | 2179 | Probable inactive serine/ | yes | no | 0.213 | 0.158 | 0.362 | 1e-70 | |
| D4A929 | 1933 | WD repeat-containing prot | yes | no | 0.216 | 0.181 | 0.396 | 1e-68 | |
| Q562E7 | 1941 | WD repeat-containing prot | yes | no | 0.223 | 0.186 | 0.404 | 2e-68 | |
| Q5ND34 | 1934 | WD repeat-containing prot | yes | no | 0.223 | 0.187 | 0.406 | 4e-67 | |
| Q10122 | 1336 | Uncharacterized WD repeat | yes | no | 0.137 | 0.166 | 0.456 | 1e-50 | |
| Q6ZS81 | 3184 | WD repeat- and FYVE domai | no | no | 0.145 | 0.073 | 0.331 | 3e-27 | |
| Q6VNB8 | 3508 | WD repeat and FYVE domain | no | no | 0.159 | 0.073 | 0.307 | 8e-27 | |
| Q8IZQ1 | 3526 | WD repeat and FYVE domain | no | no | 0.143 | 0.066 | 0.317 | 1e-26 | |
| Q9W4E2 | 3578 | Neurobeachin OS=Drosophil | no | no | 0.162 | 0.073 | 0.299 | 3e-26 | |
| Q9EPN1 | 2936 | Neurobeachin OS=Mus muscu | no | no | 0.144 | 0.079 | 0.308 | 4e-25 |
| >sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 232/472 (49%), Gaps = 126/472 (26%)
Query: 163 PSFDESSVPGCLR-HPNVAPVLGLLKTSGL--------------------ITSVIPKTPY 201
PS D +S P L+ HPN+ P++ ++ I + K Y
Sbjct: 335 PSIDYTS-PNVLKLHPNLLPIIEIIYNDIDNNDNDNDDDDDKNNNNLNDKIFIIYKKYNY 393
Query: 202 TLENILQFSPNALKSEWHVR-FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
TL+ +L++S L+ + F++YQL+ ++LH I H + PSN+ L + W L
Sbjct: 394 TLDGLLRYSLQYLQRNQKITTFMIYQLIQLFSFLHQREIVHGDLQPSNIHLNNQMWLGL- 452
Query: 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320
GF + P++P+ +E + S N+W GEL
Sbjct: 453 ------EGF-------SFPSTPLYHQPLEN----------------QFESSMNKWINGEL 483
Query: 321 SNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKP---DENFDS--------------- 362
SNF YL+ LN LA R GD H V+PWVIDF+T P D + DS
Sbjct: 484 SNFNYLMILNHLAHRHIGDPMNHPVLPWVIDFTTSPINIDNDNDSRDDVDNSSSSNNNNN 543
Query: 363 -----------GSRDLSKSKWRLAKGDEQLDFTYSSS----------------------- 388
G RDL+K+K+RL KGDEQLDF + ++
Sbjct: 544 NNNEDQSGKTVGWRDLTKTKYRLNKGDEQLDFQFFNTGNSTTLGDDSMGGGIGSIGSTGG 603
Query: 389 ----------------EIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPS 432
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+
Sbjct: 604 ITNSSNNGGGGGSGNSGKAHHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPA 662
Query: 433 TMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWA--GSPEEFIKLHRDALESDR 490
TM+RLY+WTPDECIPEF+ D IF S H M DL +P W S +EFIK+H +ALESD
Sbjct: 663 TMERLYRWTPDECIPEFFTDSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDH 722
Query: 491 VSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHP 542
VS ++H WID+TFGY +SG+ AI AKN+ L + T P++ G +QLF PHP
Sbjct: 723 VSKQLHSWIDLTFGYLLSGEEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHP 772
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|D4A929|WDR81_RAT WD repeat-containing protein 81 OS=Rattus norvegicus GN=Wdr81 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 221/416 (53%), Gaps = 66/416 (15%)
Query: 163 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 221
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLR------AEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC-----------------DK 264
F+++++L A+ H G+A ++ ++ + + S L + +K
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324
G S D P GC +GL D W G +SNF
Sbjct: 318 DRTGVKSEKDGEGRP-----GCPTCQKELRGLVLD---------------WVHGRVSNFY 357
Query: 325 YLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFT 384
YL+ LN+LAGRR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFT
Sbjct: 358 YLMQLNRLAGRRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFT 412
Query: 385 YSSSE---------------IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNE 429
Y + +PHH+SD LS++ YKARR P SVL VR+ +EP+E
Sbjct: 413 YEMTRQAFVAGGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHE 471
Query: 430 YPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESD 489
YP+TM+R+ WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES
Sbjct: 472 YPATMERMQTWTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESW 531
Query: 490 RVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
VS +HHWID+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 532 EVSQDLHHWIDLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q562E7|WDR81_HUMAN WD repeat-containing protein 81 OS=Homo sapiens GN=WDR81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 217/391 (55%), Gaps = 29/391 (7%)
Query: 171 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 229
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 230 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 289
A+ H G+A ++ ++ + + S L + D + P + I
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRL-DLSAYERPEEDENEEAPVA-RDEAGIV 327
Query: 290 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 349
QG Q + S W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 328 SQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 386
Query: 350 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHHV 394
+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH+
Sbjct: 387 VDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHVPHHI 441
Query: 395 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 454
SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY DP
Sbjct: 442 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTDPS 500
Query: 455 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 514
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 501 IFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGKEAVK 560
Query: 515 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
KNV L + T S G +QLF QPHP R
Sbjct: 561 EKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
Homo sapiens (taxid: 9606) |
| >sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 OS=Mus musculus GN=Wdr81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 217/391 (55%), Gaps = 29/391 (7%)
Query: 171 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 229
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 230 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 289
A+ H G+A ++ ++ + + S L + D S D + G I+
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL-DLSAYEMPS-EDENQEGSEEKNGTGIK 325
Query: 290 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 349
+ Q + W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 326 SEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 384
Query: 350 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHHV 394
+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH+
Sbjct: 385 VDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHHI 439
Query: 395 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 454
SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 440 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDPS 498
Query: 455 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 514
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 499 IFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVK 558
Query: 515 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
KNV L + T S G +QLF QPHP R
Sbjct: 559 EKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
Mus musculus (taxid: 10090) |
| >sp|Q10122|YSM1_CAEEL Uncharacterized WD repeat-containing protein F52C9.1 OS=Caenorhabditis elegans GN=F52C9.1 PE=4 SV=2 | Back alignment and function description |
|---|
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 315 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRL 374
W + N++YL +LN + GR G+ H + PWV DFS +EN G R L+++K+RL
Sbjct: 239 WANRKWENYQYLTYLNDITGRVRGEVHNHPIFPWVCDFS---EEN--GGFRQLNRTKYRL 293
Query: 375 AKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM 434
KGD+QL YS E HHV E LS++ Y+AR P L VR + P EYPSTM
Sbjct: 294 CKGDDQLREMYSR-EPSHHVP-ELLSDIGYMVYRARVEPKDNLCRHVRRKWVPEEYPSTM 351
Query: 435 QRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSR 494
R+YQWTPDECIPEFY DP IF S HP M DL P + SP+EFI+ HR LE + VS
Sbjct: 352 SRMYQWTPDECIPEFYDDPSIFNSCHPDMADLRFPEFVSSPQEFIEWHRKMLEHEEVSMN 411
Query: 495 IHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP--KSVGRLQLFTQPHPVR 544
+H WID+ FG+ ++ + +A N+ L E + ++ G +QLF +PHP+R
Sbjct: 412 LHRWIDLVFGFNLAIDNSKNALNLHLCFVEKNRRGLRTTGMVQLFNRPHPIR 463
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens GN=WDFY4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 134/287 (46%), Gaps = 52/287 (18%)
Query: 312 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSK 369
+W + ++SNFEYL++LN AGR DY + V PWV+ T N + RDLSK
Sbjct: 2539 LQKWQKRDISNFEYLMYLNTAAGRTCNDYMQYPVFPWVLADYTSETLNLANPKIFRDLSK 2598
Query: 370 --------SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTA- 420
K + + ++++ T + H S + V SY R P + A
Sbjct: 2599 PMGAQTKERKLKFIQRFKEVEKTEGDMTVQCHYYTHYSSAIIVASYLVRMPPFTQAFCAL 2658
Query: 421 --------------VRSVYEPNEYPSTMQRLYQWTPDEC-IPEFY--CDPQIFYSQHPG- 462
V+S +E + M + + TP+ +PEF C+ F G
Sbjct: 2659 QGGSFDVADRMFHSVKSTWE-SASRENMSDVRELTPEFFYLPEFLTNCNGVEFGCMQDGT 2717
Query: 463 -MTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVML 520
+ D+ +PPWA G P +FI LHR ALESD VS+ +HHWID+ FGYK G AA+DA N+
Sbjct: 2718 VLGDVQLPPWADGDPRKFISLHRKALESDFVSANLHHWIDLIFGYKQQGPAAVDAVNIFH 2777
Query: 521 PS--------SEPTKP----------KSVGRL--QLFTQPHPVRQTA 547
P S T P + G++ QLFT+PHP R A
Sbjct: 2778 PYFYGDRMDLSSITDPLIKSTILGFVSNFGQVPKQLFTKPHPARTAA 2824
|
Homo sapiens (taxid: 9606) |
| >sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 155/342 (45%), Gaps = 83/342 (24%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 372
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2678 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILS-------DYDSEEVDLTNPKT 2730
Query: 373 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 415
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2731 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2790
Query: 416 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 460
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2791 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2850
Query: 461 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 516
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2851 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2910
Query: 517 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKGSRKC 556
NV + ++P K + G++ QLF +PHP ++
Sbjct: 2911 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKR----------- 2959
Query: 557 KFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSP 598
VRS+ N DN+ +P A ++ F H +L P
Sbjct: 2960 --VRSRLNG--DNIGISVPPGATSDKI-----FFHHLDNLRP 2992
|
Mus musculus (taxid: 10090) |
| >sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 63/296 (21%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 372
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2696 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWIL-------ADYDSEEVDLTNPKT 2748
Query: 373 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 415
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2749 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2808
Query: 416 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 460
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2809 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2868
Query: 461 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 516
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2869 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2928
Query: 517 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKG 552
NV + ++P K + G++ QLF +PHP ++ + G
Sbjct: 2929 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRSRLNG 2984
|
Homo sapiens (taxid: 9606) |
| >sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 50/314 (15%)
Query: 282 PMIGCCIEGCSSQGLYADLKLSQSMDWHSQF-NRWWRGELSNFEYLLFLNKLAGRRWGDY 340
P +G I+ Q A + + + +S +W R E+SNFEYL+FLN +AGR + D
Sbjct: 2886 PRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDL 2945
Query: 341 TFHMVMPWVI-DFSTKP-DENFDSGSRDLSK-----SKWRLAKGDEQLDFTYSSSEIPHH 393
+ + PWV+ ++ +K D + S RDLSK + R A +E+ + S + P H
Sbjct: 2946 NQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFH 3005
Query: 394 VSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM--------QRLYQWTPD-- 443
+ ++ R P + + A++ +YP + + + T D
Sbjct: 3006 YGTHYSTAAFTLNWLVRVEPFTTMFLALQG--GKFDYPDRLFSSVSLSWKNCQRDTSDVK 3063
Query: 444 ECIPEFYCDPQIFYS--------QHPG--MTDLAVPPWAGSPEEFIKLHRDALESDRVSS 493
E IPE+Y P++FY+ + G + D+ +PPWA SPEEF++++R ALES+ VS
Sbjct: 3064 ELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSC 3123
Query: 494 RIHHWIDITFGYKMSGQAAIDAKNV------------------MLPSSEPTKPKSVGRL- 534
++H WID+ FGYK G AI A NV ++ + + ++ G+
Sbjct: 3124 QLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTP 3183
Query: 535 -QLFTQPHPVRQTA 547
QL +PHP R +A
Sbjct: 3184 SQLLMEPHPPRSSA 3197
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways. Drosophila melanogaster (taxid: 7227) |
| >sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 45/279 (16%)
Query: 314 RWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSK-- 369
RW R E+SNFEYL+FLN +AGR + D + V PWV+ S + D RDLSK
Sbjct: 2278 RWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI 2337
Query: 370 ---SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSV--LRTAVRSV 424
+ R E+ + P H + + + S+ R P + L
Sbjct: 2338 GALNPKRAVFYAERYETWEEDQSPPFHYNTHYSTATSALSWLVRIEPFTTFFLNANDGKF 2397
Query: 425 YEPNEYPSTMQRLYQWTP------DECIPEFYCDPQIFYSQ---HPGM-------TDLAV 468
P+ S++ R ++ + E IPEFY P++F + H G+ D+ +
Sbjct: 2398 DHPDRTFSSIARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYHLGVREDEVVVNDVDL 2457
Query: 469 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV---------- 518
PPWA PE+F++++R ALES+ VS ++H WID+ FGYK G A+ A NV
Sbjct: 2458 PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSV 2517
Query: 519 --------MLPSSEPTKPKSVGRL--QLFTQPHPVRQTA 547
+L + + ++ G+ QL +PHP R +A
Sbjct: 2518 NLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSA 2556
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking. Mus musculus (taxid: 10090) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1620 | ||||||
| 297736745 | 1609 | unnamed protein product [Vitis vinifera] | 0.953 | 0.960 | 0.695 | 0.0 | |
| 297736790 | 1520 | unnamed protein product [Vitis vinifera] | 0.872 | 0.930 | 0.722 | 0.0 | |
| 356574433 | 1659 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.960 | 0.663 | 0.0 | |
| 356535948 | 1660 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.960 | 0.664 | 0.0 | |
| 449441654 | 1652 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 0.957 | 0.654 | 0.0 | |
| 449522694 | 1476 | PREDICTED: uncharacterized protein LOC10 | 0.904 | 0.992 | 0.680 | 0.0 | |
| 240256309 | 1639 | protein serine/threonine kinase [Arabido | 0.963 | 0.952 | 0.613 | 0.0 | |
| 357128121 | 1633 | PREDICTED: uncharacterized protein LOC10 | 0.914 | 0.907 | 0.550 | 0.0 | |
| 53791494 | 1619 | BWF1-like protein [Oryza sativa Japonica | 0.922 | 0.922 | 0.527 | 0.0 | |
| 53791495 | 1467 | BWF1-like protein [Oryza sativa Japonica | 0.883 | 0.976 | 0.539 | 0.0 |
| >gi|297736745|emb|CBI25946.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2302 bits (5965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1129/1623 (69%), Positives = 1306/1623 (80%), Gaps = 78/1623 (4%)
Query: 11 ASQFILVYCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSI------------SEQ 58
+++FILV + NDCL KYVDEY ++N GS + + IV I +++
Sbjct: 52 SAEFILVCMPTHANDCLAKYVDEYFMENPEGSYKEGIGDIIVSEINQHQAEVGVPNLTDE 111
Query: 59 ATSTDSLRDESRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYS 118
S+DSL + S L NG + + + CNHS RFSCSR+++AL P+A IGICS
Sbjct: 112 TASSDSLLNRSESLLNGDRKIILAGLRSRSSKCNHSSRFSCSRMISALAPVARIGICSDF 171
Query: 119 IFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178
IFEELAS+F SG +ED VL SL+LLIEGKA+G++S NFL L+G+PSF+E PGCL HPN
Sbjct: 172 IFEELASDFSSGSVEDHVLCSLSLLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLMHPN 231
Query: 179 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG 238
+AP+LG+LKTS + V+PK PYTLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG
Sbjct: 232 IAPILGMLKTSDYVNLVLPKAPYTLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLG 291
Query: 239 IAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYA 298
+ H ++CPSNV+LTDSCWSWL IC C SQ LYA
Sbjct: 292 VTHGNICPSNVMLTDSCWSWLRIC----------------------------CPSQDLYA 323
Query: 299 DLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDE 358
DLKLS S+DWH F+RWWRG+LSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDE
Sbjct: 324 DLKLSPSIDWHLNFDRWWRGDLSNFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDE 383
Query: 359 NFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLR 418
N D G RDLSKSKWRLAKGDEQLDFTYS+SEIPHHVS+ECLSELAVCSYKARRLPLSVLR
Sbjct: 384 NVDEGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSEECLSELAVCSYKARRLPLSVLR 443
Query: 419 TAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEF 478
AVRSVYEPNEYPS MQRLYQWTPDECIPEFYCDPQIF S H GM DLAVP WA SPEEF
Sbjct: 444 LAVRSVYEPNEYPSNMQRLYQWTPDECIPEFYCDPQIFRSLHSGMADLAVPSWARSPEEF 503
Query: 479 IKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFT 538
IK+HRDALESDRVS +IHHWIDITFGYKMSGQAA+ AKNVMLPS+EP P
Sbjct: 504 IKVHRDALESDRVSCQIHHWIDITFGYKMSGQAALAAKNVMLPSTEPMMP---------- 553
Query: 539 QPHPVRQTATWEKGSRKCKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSP 598
+E+ LLP+ YLQ+LEEA AFS+HA HLSP
Sbjct: 554 --------------------------SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSP 587
Query: 599 RYYNHQESFGMYISPTKEFSSESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGS 657
Y H ++ +S +E SES IS E G+++ V S+IDL YLL+++EV+DEGS
Sbjct: 588 LYCYHPKNLADDVSSVEEPPSESSKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGS 647
Query: 658 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPG 717
+ YQELLLWRQKS SK S+D +KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG
Sbjct: 648 VGYQELLLWRQKSYCSKALSEDVAKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPG 707
Query: 718 VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRL 777
+++ELP HT+ LVEACI KDW RRPSAKSL ESPYF +TV+SSYLFVAPLQL+A+ GS L
Sbjct: 708 LIQELPPHTKALVEACILKDWRRRPSAKSLFESPYFLTTVRSSYLFVAPLQLLAKDGSHL 767
Query: 778 QYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVR 837
+YAANFAK GALKAM +F AE CAPYCLPLV PLSD EAE AY+LLKEF+KCL KAV+
Sbjct: 768 RYAANFAKQGALKAMRAFGAEMCAPYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVK 827
Query: 838 TMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKS 897
+++LPAIQKILQ + YSHLKVSLLQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKS
Sbjct: 828 SLVLPAIQKILQAS-YSHLKVSLLQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKS 886
Query: 898 SASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQ 957
SASAASVLLIG SEELGVPITVHQT+LPLI CFG+G+C DGIDV+VRIGGL GE FI R
Sbjct: 887 SASAASVLLIGFSEELGVPITVHQTVLPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARH 946
Query: 958 MLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRS 1017
+LPLLK+V R IDVS+ NKPEP+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S
Sbjct: 947 ILPLLKNVVRYCIDVSSMNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQS 1006
Query: 1018 CLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDE 1077
+HVMVLM NLEI VLQVAA+ L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++
Sbjct: 1007 FVHVMVLMQANLEIPVLQVAANYLIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANG 1066
Query: 1078 SGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLR 1137
SGSLG +LK K KVD ++Q+ SRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR
Sbjct: 1067 SGSLGRALKFSKSKVDEDAQMGSRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLR 1126
Query: 1138 YHNWKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKN 1197
HNWKWE+TGESSR ENISA RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KN
Sbjct: 1127 CHNWKWEHTGESSRTGAENISANRPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKN 1186
Query: 1198 LIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKI 1257
LI Q+R Y H+ V+R A+S++ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI
Sbjct: 1187 LIAQKRFYSLHQDPVQRHAASSSIGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKI 1246
Query: 1258 KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEV 1317
+AS++ S RAHHGALRS+AV QDECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEV
Sbjct: 1247 RASVIHSARAHHGALRSLAVCQDECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEV 1306
Query: 1318 VNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1377
VNDIC+LSSSGR+ASCDGT+H+WNSQTGKL+ VF+E S DSLH SP SS SKIN DQ
Sbjct: 1307 VNDICILSSSGRVASCDGTIHIWNSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQAN 1366
Query: 1378 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1437
MLN N+L+SGIL++AFDG+LYTC+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E
Sbjct: 1367 MLNPNSLTSGILTSAFDGSLYTCMHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSES 1426
Query: 1438 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG 1497
+ GFPS VSA+C+CGS++MQ GA A PSWIAAG SSG CRL DVRSGN+IASWRAHDG
Sbjct: 1427 IDSGFPSFVSAVCSCGSDRMQVDGASALPSWIAAGFSSGSCRLLDVRSGNLIASWRAHDG 1486
Query: 1498 YVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISN 1557
Y+TKLAA EDHLLVSSSLD+TLRIWDLRR W ++P +F+GHT+G+SGFSVWGQD+ISIS
Sbjct: 1487 YITKLAAREDHLLVSSSLDRTLRIWDLRRGWSAEPIIFRGHTDGVSGFSVWGQDIISISK 1546
Query: 1558 NKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1617
NKIGLSSLS+SADE+GQH + PQKLYM D G ++LSVLSSISILPFSRLFLVGTEDGYLR
Sbjct: 1547 NKIGLSSLSRSADEEGQHWVTPQKLYMPDRGTRHLSVLSSISILPFSRLFLVGTEDGYLR 1606
Query: 1618 LCC 1620
+CC
Sbjct: 1607 ICC 1609
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736790|emb|CBI25991.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2209 bits (5723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1069/1480 (72%), Positives = 1223/1480 (82%), Gaps = 66/1480 (4%)
Query: 142 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 201
LLIEGKA+G++S NFL L+G+PSF+E PGCLRHPN+AP+LG+LKTS + V+PK PY
Sbjct: 106 LLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLRHPNIAPILGMLKTSDYVNLVLPKAPY 165
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261
TLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+LTDSCWSWL I
Sbjct: 166 TLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVMLTDSCWSWLRI 225
Query: 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321
C C SQ LYADLKLS S+DWH F+RWWRG+LS
Sbjct: 226 C----------------------------CPSQDLYADLKLSPSIDWHLNFDRWWRGDLS 257
Query: 322 NFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQL 381
NFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSKSKWRLAKGDEQL
Sbjct: 258 NFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSKSKWRLAKGDEQL 317
Query: 382 DFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWT 441
DFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQRLYQWT
Sbjct: 318 DFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRLAVRSVYEPNEYPSNMQRLYQWT 377
Query: 442 PDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDI 501
PDECIPEFYCDPQIF+S H GM DLAVP WA SPEEFIK+HRDALESD+VS +IHHWIDI
Sbjct: 378 PDECIPEFYCDPQIFHSLHSGMADLAVPSWARSPEEFIKVHRDALESDQVSCQIHHWIDI 437
Query: 502 TFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRS 561
TFGYKMSGQAA+ A NVMLPS+EP P
Sbjct: 438 TFGYKMSGQAALAAMNVMLPSTEPMMP--------------------------------- 464
Query: 562 QNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKEFSSES 621
+E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++ +S +E SES
Sbjct: 465 ---SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLADDVSSVEEPPSES 521
Query: 622 FVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDC 680
IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWRQKS S+ S+D
Sbjct: 522 SKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWRQKSYCSRALSEDV 581
Query: 681 SKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDWTR 740
+KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+ LVEACI KDW R
Sbjct: 582 AKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTKALVEACILKDWRR 641
Query: 741 RPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAAERC 800
RPSAKSLLESPYF +TV+SSYLFVAPLQL+A+ GSRL+YAANFAK GALKAMG+F AE C
Sbjct: 642 RPSAKSLLESPYFLTTVRSSYLFVAPLQLLAKDGSRLRYAANFAKQGALKAMGAFGAEMC 701
Query: 801 APYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLKVSL 860
APYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKILQ + YSHLKVSL
Sbjct: 702 APYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKILQAS-YSHLKVSL 760
Query: 861 LQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPITVH 920
LQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLIGSSEELGVPITVH
Sbjct: 761 LQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLIGSSEELGVPITVH 820
Query: 921 QTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEP 980
QTILPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R IDVS+ NKPEP
Sbjct: 821 QTILPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVRYCIDVSSMNKPEP 880
Query: 981 VQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVAAST 1040
+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM NLEI VLQVAA+
Sbjct: 881 MQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLEIPVLQVAANY 940
Query: 1041 LMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQIES 1100
L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK K KVD E+ + S
Sbjct: 941 LIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKFAKSKVDEEAHMGS 1000
Query: 1101 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEENISAK 1160
RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR HNWKWE+TGESSR ENISA
Sbjct: 1001 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLRCHNWKWEHTGESSRTGAENISAN 1060
Query: 1161 RPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSN 1220
RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KNLI Q+R Y H+ V+R A+S+
Sbjct: 1061 RPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKNLIAQKRFYSLHQDPVQRHAASSS 1120
Query: 1221 LMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQD 1280
+ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI+AS++ S RAHHGALRS+AV QD
Sbjct: 1121 IGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKIRASVIHSARAHHGALRSLAVCQD 1180
Query: 1281 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVW 1340
ECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEVVNDIC+LSSSGR+ASCDGT+H+W
Sbjct: 1181 ECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEVVNDICILSSSGRVASCDGTIHIW 1240
Query: 1341 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1400
NSQTGKL+ VF+E S DSLH SP SS SKIN DQ MLN N+L+SGIL++AFDG+LYTC
Sbjct: 1241 NSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQANMLNPNSLTSGILTSAFDGSLYTC 1300
Query: 1401 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1460
+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E + GFPS VSA+C+CGS++MQ
Sbjct: 1301 MHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSESIDSGFPSFVSAVCSCGSDRMQVD 1360
Query: 1461 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
GA A PSWIAAG SSG CRL D RSGN+IASWRAHDGY+TKLAA EDHLLVSSSLD+TLR
Sbjct: 1361 GASALPSWIAAGFSSGSCRLLDARSGNLIASWRAHDGYITKLAAREDHLLVSSSLDRTLR 1420
Query: 1521 IWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQ 1580
IWDLRR W ++P +F+GHT+G+SGFSVWGQD+ISIS NKIGLSSLS+SADE+GQH + PQ
Sbjct: 1421 IWDLRRGWSAEPIIFRGHTDGVSGFSVWGQDIISISKNKIGLSSLSRSADEEGQHWVTPQ 1480
Query: 1581 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620
KLYM D G ++LSVLSSISILPFSRLFLVGTEDGYLR+CC
Sbjct: 1481 KLYMPDRGTRHLSVLSSISILPFSRLFLVGTEDGYLRICC 1520
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574433|ref|XP_003555352.1| PREDICTED: uncharacterized protein LOC100810047 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2175 bits (5636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1076/1621 (66%), Positives = 1294/1621 (79%), Gaps = 27/1621 (1%)
Query: 11 ASQFILVYCRSLENDCLTKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLR 66
+QFIL Y + + +C YV+EY++D+ SD + ++ +++ + TS+D
Sbjct: 55 GAQFILQYMPTRDKNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSD--- 111
Query: 67 DESRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASN 126
+ + G+ C+HSGRFSC R +T+L PIA +G+ SYS F+E++++
Sbjct: 112 -----------DSESGKAFSGSTSCSHSGRFSCLRTITSLAPIARVGMSSYSTFQEVSTD 160
Query: 127 FLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186
FL +ED VL SL+L IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL +
Sbjct: 161 FLCELIEDHVLESLDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIF 220
Query: 187 KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246
KTS + V+PKTPY LE+IL F+PNALKS W++ FLMYQLLSA++Y+H LG++H ++CP
Sbjct: 221 KTSDHVNVVLPKTPYNLESILHFNPNALKSNWNIIFLMYQLLSALSYIHGLGLSHGNICP 280
Query: 247 SNVLLTDSCWSWLYICDKPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQ 304
SN++LTDS WSWL + ++P++ N ++ + + P IGCC C S LYADLKLS
Sbjct: 281 SNIMLTDSLWSWLRLWNEPVLESNLTLQESERDNSKPARIGCCNVACRSYDLYADLKLSP 340
Query: 305 SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS 364
++DW S F++WWRGELSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD++ D+G
Sbjct: 341 TIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDSCDAGW 400
Query: 365 RDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV 424
RDLSKSKWRLAKGDEQLDFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSV
Sbjct: 401 RDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSV 460
Query: 425 YEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRD 484
YEPNEYPSTMQRLYQWTPDECIPEFYC QIF S H GM DLAVP WA SPE+FIKLHRD
Sbjct: 461 YEPNEYPSTMQRLYQWTPDECIPEFYCHAQIFKSIHDGMADLAVPSWAESPEDFIKLHRD 520
Query: 485 ALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVR 544
ALES+RVS ++HHWIDITFGYKMSGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R
Sbjct: 521 ALESNRVSFQLHHWIDITFGYKMSGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIR 580
Query: 545 QTATWEK--GSRKCKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-Y 601
T K GS K V Q N E+ +SLL E AYLQELE+A FS+ ARHL+ Y Y
Sbjct: 581 HATTRTKRHGSNKYAKVWIQAN-EMHQETSLLSETAYLQELEQASTFSEQARHLNAYYHY 639
Query: 602 NHQESFGMYISPTKEFSSESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEY 660
++ G IS + ++E+F +IS + + V ++L L+H++ EDE S+ Y
Sbjct: 640 PLNQTTGKNISSLGDPTTETFSESISKLSLIDRNYQVPYRMNLISFLQHMKEEDESSLGY 699
Query: 661 QELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVME 720
+LLLW+QK S S+ S+D ++DIFSIGCLLAELHL RPLFD ISLA+YLE+G LPG ++
Sbjct: 700 PDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLCRPLFDPISLAIYLEDGTLPGFLQ 759
Query: 721 ELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYA 780
+LP R+LVEACI KDWTRRPSAK LLESPYFP TVKSSYLF+APLQL+A+ +RL YA
Sbjct: 760 DLPPDIRLLVEACIQKDWTRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLHYA 819
Query: 781 ANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMI 840
AN AK GAL+ MG+FA E C YCLPL+ +SD EAE AY+LLKEF+KCL+ +A++T+I
Sbjct: 820 ANLAKHGALREMGAFATEMCTTYCLPLIVNAVSDTEAEWAYMLLKEFMKCLTVQAMKTLI 879
Query: 841 LPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSAS 900
LP IQKILQTTGY LKVSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA+
Sbjct: 880 LPTIQKILQTTGYLRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYNSPDKSSAA 939
Query: 901 AASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLP 960
+ASVLLI SSEELGVPIT+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FI++QM+P
Sbjct: 940 SASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIIKQMVP 999
Query: 961 LLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLH 1020
LLK+V RS IDVS NK +PVQSWSAL+LIDC+MTLDGLV FL EV+VKEL+ED C+H
Sbjct: 1000 LLKNVVRSFIDVSCMNKADPVQSWSALALIDCMMTLDGLVYFLTEEVIVKELLEDLCCIH 1059
Query: 1021 VMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGS 1080
+ VLM ++EI VLQVAASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S +
Sbjct: 1060 IGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTT 1119
Query: 1081 LGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHN 1140
+G +LKV K K+ G+ IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ LLR+HN
Sbjct: 1120 VGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQHLLRHHN 1179
Query: 1141 WKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIP 1200
WKWEY GESS+ S EN A+RP++ +G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIP
Sbjct: 1180 WKWEYAGESSKNSSENFLARRPVIAQGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIP 1238
Query: 1201 QRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS 1260
QRR + H+S V E S M EPWFWFP+PA WDGP+FLGRVG KDE PWKI+AS
Sbjct: 1239 QRRPFKVHQSPVAVHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDELPWKIRAS 1298
Query: 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320
++ SIRAHHGA+RS+AV QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVND
Sbjct: 1299 VIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVND 1358
Query: 1321 ICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLN 1380
I +LSSSGR+ASCDGT+H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN
Sbjct: 1359 IYILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLN 1418
Query: 1381 SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTEL 1440
NTLS+GILS+AFD +LYTC+H + E LVVG GNGSLRFID+ +GQKLH+WRGE T
Sbjct: 1419 MNTLSNGILSSAFDSSLYTCMHLLNSTETLVVGTGNGSLRFIDVARGQKLHIWRGESTVS 1478
Query: 1441 GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1500
FPSL+SAIC+ GS+KMQAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVT
Sbjct: 1479 SFPSLISAICSTGSDKMQAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVT 1538
Query: 1501 KLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKI 1560
KLAAPE+HLLVSSSLD+TLR+WDLR N P QP +F+GH++GIS FSVWGQDVISIS N+I
Sbjct: 1539 KLAAPEEHLLVSSSLDRTLRVWDLRMNLPLQPIIFRGHSDGISSFSVWGQDVISISRNRI 1598
Query: 1561 GLSSLSKSADE-DGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
GL SLSKSA+E DGQH + PQ+LY+ DNG ++LS LSSISILPFSRLFL+GTEDGYLR+C
Sbjct: 1599 GLLSLSKSANETDGQHHISPQRLYISDNGQRSLSALSSISILPFSRLFLIGTEDGYLRIC 1658
Query: 1620 C 1620
C
Sbjct: 1659 C 1659
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535948|ref|XP_003536503.1| PREDICTED: uncharacterized protein LOC100809116 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2175 bits (5636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1077/1621 (66%), Positives = 1302/1621 (80%), Gaps = 27/1621 (1%)
Query: 11 ASQFILVYCRSLENDCLTKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLR 66
+QFIL Y S + +C YV+EY++D+ SD + ++ +++ + TS+D
Sbjct: 56 GAQFILQYMPSRDKNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDD-S 114
Query: 67 DESRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASN 126
D + + G+ C+HS RFSC R +T+L P+A +GI SYS F+E++++
Sbjct: 115 DSGKAFS-------------GSTSCSHSERFSCLRTITSLAPVARVGISSYSTFQEVSTD 161
Query: 127 FLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186
FLSG +ED VL SL+L IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL +
Sbjct: 162 FLSGLIEDHVLESLDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIF 221
Query: 187 KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246
KTS + V+PK PY LE+IL F+P+ALKS W+ FLMYQLLSA++Y+H LG++H ++CP
Sbjct: 222 KTSDHVNVVLPKNPYNLESILHFNPDALKSNWNRIFLMYQLLSALSYIHGLGVSHGNICP 281
Query: 247 SNVLLTDSCWSWLYICDKPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQ 304
SN++LTDS WSWL + ++P++ N ++ + + + P IGCC GC S GLYADL+LS
Sbjct: 282 SNIMLTDSLWSWLRLWNEPVLESNLTLQESERVNSEPARIGCCNVGCRSYGLYADLRLSP 341
Query: 305 SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS 364
++DW S F++WWRGELSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD+N D+G
Sbjct: 342 TIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDTGW 401
Query: 365 RDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV 424
RDLSKSKWRLAKGDEQLDFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSV
Sbjct: 402 RDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRVAVRSV 461
Query: 425 YEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRD 484
YEPNEYPSTMQRLYQWTPDECIPEFYCD QIF S H GM DLAVP WA S E+FIKLHRD
Sbjct: 462 YEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMADLAVPSWAESHEDFIKLHRD 521
Query: 485 ALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVR 544
ALES+RVS ++HHWIDITFGYK+SGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R
Sbjct: 522 ALESNRVSFQLHHWIDITFGYKISGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIR 581
Query: 545 Q--TATWEKGSRKCKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-Y 601
T+T GS K V SQ N +SLL E AYLQELE+A FS+HARHL+ Y Y
Sbjct: 582 HATTSTKRHGSNKYAKVWSQAN-ATHRETSLLSETAYLQELEQASTFSEHARHLNAFYHY 640
Query: 602 NHQESFGMYISPTKEFSSESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEY 660
++ G IS + + ++E+F +IS + + V ++L L+H++ ED+GS Y
Sbjct: 641 PLNQTRGKNISSSGDPTTETFSESISKLSLIDRNYQVPYKMNLISFLQHMKEEDKGSSGY 700
Query: 661 QELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVME 720
+LLLW+QK S S+ S+D ++DIFS+GCLLAELHL RPLFD ISLA+YLE+G LPG ++
Sbjct: 701 PDLLLWKQKLSSSRLCSEDIARDIFSVGCLLAELHLCRPLFDPISLAIYLEDGTLPGYLQ 760
Query: 721 ELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYA 780
+LP R+LVEACI KDW RRPSAK LLESPYFP+TVKSSYLF+APLQL+A+ +RL+YA
Sbjct: 761 DLPPDIRLLVEACIQKDWMRRPSAKILLESPYFPNTVKSSYLFLAPLQLVAKDETRLRYA 820
Query: 781 ANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMI 840
AN AK GAL+ MG+FA E C YCLPL+ T +SD EAE AY+LLKEF+KCL+ +AV+T+I
Sbjct: 821 ANLAKHGALREMGTFATEMCTTYCLPLIVTAVSDTEAEWAYMLLKEFMKCLTVQAVKTLI 880
Query: 841 LPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSAS 900
LP IQKILQTT Y LKVSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA+
Sbjct: 881 LPTIQKILQTTSYLRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAA 940
Query: 901 AASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLP 960
+ASVLLI SSEELGVPIT+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FIV+QM+P
Sbjct: 941 SASVLLISSSEELGVPITIHQTILPLVHCFGKGLCSDGIDVLVRIGGIFGELFIVKQMVP 1000
Query: 961 LLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLH 1020
LLK+V RS IDVS NKP+PVQSWSAL+LIDC++TLDGLVAFL EV+VKEL+ED SC+H
Sbjct: 1001 LLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMLTLDGLVAFLTEEVIVKELLEDLSCIH 1060
Query: 1021 VMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGS 1080
+ VLM ++EI VLQVAASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S +
Sbjct: 1061 IGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTT 1120
Query: 1081 LGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHN 1140
+G +LKV K K+ G+ IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ+LLR+HN
Sbjct: 1121 VGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHN 1180
Query: 1141 WKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIP 1200
WKWEY GESS+ E + A+RP++ G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIP
Sbjct: 1181 WKWEYAGESSKNGSEIVLARRPVIAHGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIP 1239
Query: 1201 QRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS 1260
QR+ + H+S V E S M EPWFWFP+PA WDGP+FLGRVG KD+ PWKI+A+
Sbjct: 1240 QRQPFKVHQSPVAVHEEMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRAT 1299
Query: 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320
++ SIRAHHGA+RS+AV QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVND
Sbjct: 1300 VIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVND 1359
Query: 1321 ICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLN 1380
IC+LSSSGR+ASCDGT+H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN
Sbjct: 1360 ICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSSSKINSDQANVLN 1419
Query: 1381 SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTEL 1440
NTLSSGILS+AFD +LYTC+H + E LVVG GNGSLRF D+ +GQKLH+WRGE TE
Sbjct: 1420 LNTLSSGILSSAFDSSLYTCMHLLNSAETLVVGTGNGSLRFFDVARGQKLHIWRGESTES 1479
Query: 1441 GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1500
FPSL+SAIC+ GS+KMQAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVT
Sbjct: 1480 SFPSLISAICSTGSDKMQAGGISTFPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVT 1539
Query: 1501 KLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKI 1560
KLAAPE+HLLVSSSLD+TLR+WDLR N SQP +F+GH++GIS FS+WGQDVISIS N+I
Sbjct: 1540 KLAAPEEHLLVSSSLDRTLRVWDLRMNLSSQPIIFRGHSDGISSFSIWGQDVISISRNRI 1599
Query: 1561 GLSSLSKSADE-DGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
GL SLSKS +E DGQH + PQKLY+ DNG ++LS LSSISILPFSRLFL+GTEDGYLR+C
Sbjct: 1600 GLLSLSKSPNETDGQHHISPQKLYVSDNGQRSLSALSSISILPFSRLFLIGTEDGYLRIC 1659
Query: 1620 C 1620
C
Sbjct: 1660 C 1660
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441654|ref|XP_004138597.1| PREDICTED: uncharacterized protein LOC101204693 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2165 bits (5610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1066/1628 (65%), Positives = 1298/1628 (79%), Gaps = 47/1628 (2%)
Query: 11 ASQFILVYCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATST-------- 62
SQF++VY + +++C+T YV+EY++DN V S+SE++ T
Sbjct: 52 GSQFMIVYLPAHDHNCITNYVNEYLLDN-------------VNSLSEESFHTMSPVSADQ 98
Query: 63 -DSLRDESRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFE 121
DS+R S L+ G + + + Y NHS R SCSRI+++L P+A + + S SIFE
Sbjct: 99 EDSIRAGSLHLSQIGEKSATESPNY-----NHSSRLSCSRIISSLAPVARVCVSSPSIFE 153
Query: 122 ELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181
E+ASN LSG LED VL SL LLIEG+ASG++S NFL L+G+P F E+ CLRHPNV P
Sbjct: 154 EVASNLLSGSLEDHVLHSLCLLIEGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVP 213
Query: 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAH 241
VL +L+TSG +++P TPYTLENIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H
Sbjct: 214 VLSMLRTSGYTNAILPSTPYTLENILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFH 273
Query: 242 RSVCPSNVLLTDSCWSWLYICDKP--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYAD 299
+CPSNV+L D CWSWL+ICD P + N + C++ TS I C + CSS+ LYAD
Sbjct: 274 GKICPSNVMLNDMCWSWLHICDMPGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYAD 333
Query: 300 LKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDEN 359
KLS S+DW S F RWWRGELSNFEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+
Sbjct: 334 FKLSSSIDWPSDFFRWWRGELSNFEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDES 393
Query: 360 FDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRT 419
D G RDLSKSKWRLAKGDEQLDFTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR
Sbjct: 394 SDVGWRDLSKSKWRLAKGDEQLDFTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRM 453
Query: 420 AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFI 479
AVRSVYEPNEYPS MQRLYQWTPDECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFI
Sbjct: 454 AVRSVYEPNEYPSNMQRLYQWTPDECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFI 513
Query: 480 KLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQ 539
KLHRDALESDRVS+++H WIDI FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++
Sbjct: 514 KLHRDALESDRVSAKLHEWIDIAFGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSR 573
Query: 540 PHPVRQTATWEKGSRKCK-----FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHAR 594
PHP RQ T R C+ V + +E+++ +S++ E YL+ELE A +F + R
Sbjct: 574 PHPKRQVLT----KRSCQSPVISVVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGR 629
Query: 595 HLSPRY-YNHQESFGMYISPTKEFSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLE 651
HLS Y Y ++ M +KE SS +SF +SN + ++H ++I L YLLEH+E
Sbjct: 630 HLSALYGYFAKKPEDM---SSKELSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVE 686
Query: 652 VEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE 711
VE + S+ YQELL W++K + FS + DIFSIGC+LAELHL++PLF S SLA+YLE
Sbjct: 687 VESKDSIGYQELLSWKEKM-FHLQFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLE 745
Query: 712 NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIA 771
+G LPG ++ELP +ILVEACI KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A
Sbjct: 746 SGILPGFIQELPPDIKILVEACIQKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLA 805
Query: 772 RHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCL 831
+ +RL+Y ANFAK GALKAMG FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL
Sbjct: 806 KDATRLRYVANFAKQGALKAMGDFAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCL 865
Query: 832 SPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLY 891
PKAV+T++LP IQKILQ TGYSHLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL
Sbjct: 866 MPKAVKTLVLPGIQKILQVTGYSHLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLS 925
Query: 892 AAPHKSSASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGE 951
APHKSSA+AASVLLIGS EELG+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+
Sbjct: 926 VAPHKSSAAAASVLLIGSCEELGMPVTINQTILPLINCFGKGICADGMDALVRIGGLFGD 985
Query: 952 TFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKE 1011
TFI++QMLPLLK+V R I S+ +KPEP+QSWS+L+LIDC TLDGLVA+LP EVV+ E
Sbjct: 986 TFIIKQMLPLLKNVVRCCIKFSSVSKPEPMQSWSSLALIDCFTTLDGLVAYLPGEVVLNE 1045
Query: 1012 LIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFS 1071
LIE + CLHVMVL+ NL+++VLQVAAS+LM ICQ IG D+TALH++P L+E+FDELAFS
Sbjct: 1046 LIEGQKCLHVMVLIQKNLDVSVLQVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFS 1105
Query: 1072 QECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLL 1131
QE + S S+G ++K KP +DG+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLL
Sbjct: 1106 QEAAYRSTSIGRNMKSSKPSIDGDVLNERRMDLVLILYPTFASILGIEKLRQCCTTWLLL 1165
Query: 1132 EQFLLRYHNWKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQG 1191
EQ+LLRYHNWKWE TG SSR S E + +KR +K STS+ +PAKLLLNGVGWSIPQSQ
Sbjct: 1166 EQYLLRYHNWKWECTGMSSRCSSEKLISKRNEFSKSSTSEYSPAKLLLNGVGWSIPQSQR 1225
Query: 1192 SRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKD 1251
++ +KNL+P R +D H S++ +TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+
Sbjct: 1226 AQGAKNLMPLR--HDVHGGSMQMHASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKE 1283
Query: 1252 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY 1311
E PWKIKAS++ S+RAH GA+RS+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGY
Sbjct: 1284 EHPWKIKASVIYSVRAHQGAVRSLAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGY 1343
Query: 1312 YGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371
YGHEEVVNDICVLS +GRIASCDGT+HVWNS++GKL+SVFAE S+DS H SP SS+ K
Sbjct: 1344 YGHEEVVNDICVLSPTGRIASCDGTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKP 1403
Query: 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH 1431
N D V +++SN+LSSGIL++AFDG+LYT +HH+E E+LVVG GNGSLRFID+ QGQKLH
Sbjct: 1404 NMDHVNLISSNSLSSGILTSAFDGSLYTYMHHLEFAEKLVVGTGNGSLRFIDVAQGQKLH 1463
Query: 1432 LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1491
LWRG+ E GFPSLVSAI +CG +KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+
Sbjct: 1464 LWRGDGVESGFPSLVSAIGSCGFDKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIAT 1523
Query: 1492 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQD 1551
WRAHDGYVTKLAAPE+H+LVSSSLD+TLRIWDLRR PS+P +F+GH +G+S FS+WGQD
Sbjct: 1524 WRAHDGYVTKLAAPEEHMLVSSSLDRTLRIWDLRRLSPSKPIIFRGHNDGVSSFSMWGQD 1583
Query: 1552 VISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT 1611
VISIS NKIGLSSL+KSADEDGQ+R++PQ L D G +NLSVLSSISIL +SRLF+VGT
Sbjct: 1584 VISISRNKIGLSSLTKSADEDGQYRVIPQNLASNDQGTRNLSVLSSISILRYSRLFIVGT 1643
Query: 1612 EDGYLRLC 1619
EDGY+++C
Sbjct: 1644 EDGYMKIC 1651
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522694|ref|XP_004168361.1| PREDICTED: uncharacterized protein LOC101225335, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2081 bits (5393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1010/1485 (68%), Positives = 1216/1485 (81%), Gaps = 20/1485 (1%)
Query: 145 EGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLE 204
EG+ASG++S NFL L+G+P F E+ CLRHPNV PVL +L+TSG +++P TPYTLE
Sbjct: 1 EGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVPVLSMLRTSGYTNAILPSTPYTLE 60
Query: 205 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264
NIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H +CPSNV+L D CWSWL+ICD
Sbjct: 61 NILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFHGKICPSNVMLNDMCWSWLHICDM 120
Query: 265 P--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 322
P + N + C++ TS I C + CSS+ LYAD KLS S+DW S F RWWRGELSN
Sbjct: 121 PGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYADFKLSSSIDWPSDFFRWWRGELSN 180
Query: 323 FEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLD 382
FEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+ D G RDLSKSKWRLAKGDEQLD
Sbjct: 181 FEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDESSDVGWRDLSKSKWRLAKGDEQLD 240
Query: 383 FTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTP 442
FTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR AVRSVYEPNEYPS MQRLYQWTP
Sbjct: 241 FTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRMAVRSVYEPNEYPSNMQRLYQWTP 300
Query: 443 DECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDIT 502
DECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFIKLHRDALESDRVS+++H WIDI
Sbjct: 301 DECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFIKLHRDALESDRVSAKLHEWIDIA 360
Query: 503 FGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCK----- 557
FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++PHP RQ T R C+
Sbjct: 361 FGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSRPHPKRQVLT----KRSCQSPVIS 416
Query: 558 FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPTKE 616
V + +E+++ +S++ E YL+ELE A +F + RHLS Y Y ++ M +KE
Sbjct: 417 VVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGRHLSALYGYFAKKPEDM---SSKE 473
Query: 617 FSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSK 674
SS +SF +SN + ++H ++I L YLLEH+EVE + S+ YQELL W++K +
Sbjct: 474 LSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVEVESKDSIGYQELLSWKEKM-FHL 532
Query: 675 TFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACI 734
FS + DIFSIGC+LAELHL++PLF S SLA+YLE+G LPG ++ELP +ILVEACI
Sbjct: 533 QFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLESGILPGFIQELPPDIKILVEACI 592
Query: 735 TKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGS 794
KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A+ +RL+Y ANFAK GALKAMG
Sbjct: 593 QKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLAKDATRLRYVANFAKQGALKAMGD 652
Query: 795 FAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYS 854
FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL PKAV+T++LP IQKILQ TGYS
Sbjct: 653 FAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCLMPKAVKTLVLPGIQKILQVTGYS 712
Query: 855 HLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELG 914
HLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL APHKSSA+AASVLLIGS EELG
Sbjct: 713 HLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLSVAPHKSSAAAASVLLIGSCEELG 772
Query: 915 VPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSN 974
+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+TFI++QMLPLLK+V R I S+
Sbjct: 773 MPVTINQTILPLINCFGKGICADGMDALVRIGGLFGDTFIIKQMLPLLKNVVRCCIKFSS 832
Query: 975 TNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVL 1034
+KPEP+QSWS L+LIDC TLDGLVA+LP EVV+KELIE + CLHVMVL+ NL+++VL
Sbjct: 833 VSKPEPMQSWSCLALIDCFTTLDGLVAYLPGEVVLKELIEGQKCLHVMVLIQKNLDVSVL 892
Query: 1035 QVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDG 1094
QVAAS+LM ICQ IG D+TALH++P L+E+FDELAFSQE + S S+G ++K KP +DG
Sbjct: 893 QVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFSQEAAYRSTSIGRNMKSSKPSIDG 952
Query: 1095 ESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISE 1154
+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLLEQ+LLRYHNWKWE TG SSR S
Sbjct: 953 DVLNEGRMDLVLILYPTFASILGIEKLRQCCTTWLLLEQYLLRYHNWKWECTGMSSRCSS 1012
Query: 1155 ENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVER 1214
E + +KR +KGSTS+ +PAKLLLNGVGWSIPQSQ ++ +KNL+P R +D H+ S++
Sbjct: 1013 EKLISKRNEFSKGSTSEYSPAKLLLNGVGWSIPQSQRAQGAKNLMPLR--HDVHRGSMQM 1070
Query: 1215 QEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRS 1274
+TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+E PWKIKAS++ S+RAH GA+RS
Sbjct: 1071 HASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKEEHPWKIKASVIYSVRAHQGAVRS 1130
Query: 1275 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCD 1334
+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGYYGHEEVVNDICVLS +GRIASCD
Sbjct: 1131 LAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGYYGHEEVVNDICVLSPTGRIASCD 1190
Query: 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFD 1394
GT+HVWNS++GKL+SVFAE S+DS H SP SS+ K N D V +++SN+LSSGIL++AFD
Sbjct: 1191 GTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKTNMDHVNLISSNSLSSGILTSAFD 1250
Query: 1395 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1454
G+LYT +HHIE E+LVVG GNGSLRFID+ QGQKLHLWRG+ E GFPSLVSAI +CG
Sbjct: 1251 GSLYTYMHHIEFAEKLVVGTGNGSLRFIDVAQGQKLHLWRGDGVESGFPSLVSAIGSCGF 1310
Query: 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSS 1514
+KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+WRAHDGYVTKLAAPE+H+LVSSS
Sbjct: 1311 DKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIATWRAHDGYVTKLAAPEEHMLVSSS 1370
Query: 1515 LDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQ 1574
LD+TLRIWDLRR PS+P +F+GH +G+S FS+WGQDVISIS NKIGLSSL+KSADEDGQ
Sbjct: 1371 LDRTLRIWDLRRLSPSKPIIFRGHNDGVSSFSMWGQDVISISRNKIGLSSLTKSADEDGQ 1430
Query: 1575 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
+R++PQ L D G +NLSVLSSISIL +SRLF+VGTEDGY+++C
Sbjct: 1431 YRVIPQNLASNDQGTRNLSVLSSISILRYSRLFIVGTEDGYMKIC 1475
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240256309|ref|NP_974804.4| protein serine/threonine kinase [Arabidopsis thaliana] gi|332005192|gb|AED92575.1| protein serine/threonine kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1920 bits (4973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 994/1621 (61%), Positives = 1205/1621 (74%), Gaps = 60/1621 (3%)
Query: 13 QFILVYCRSLENDCLTKYVDEYVV-DNNGGSDSQVEENDIVGSISEQATSTDSLRDESRC 71
QFIL Y R E+ CL KYVD++VV D G S+ VE ++ + + + +T+
Sbjct: 66 QFILEYLRKDEHGCLAKYVDKFVVKDREGNSNDAVESDECLDCSTSGSQATE-------- 117
Query: 72 LANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGC 131
+ + I G+ C HSG FSC R + AL PIA I CS S ++LAS+F C
Sbjct: 118 ------DDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYEC 171
Query: 132 LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSF-DESSVPGCLRHPNVAPVLGLLKTSG 190
ED +L SL+ LI+GK+SGQ + +FL L+ +E S CLRHPN++PVLGLL +S
Sbjct: 172 PEDQILASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSD 231
Query: 191 LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
+ SV+PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH L ++H + PSN+L
Sbjct: 232 CLVSVLPKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNIL 291
Query: 251 LTDSCWSWLYICDKPLVG---FNSIAD---WCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304
L+DS WSWL I KP +G NS A WC +EGC S GLYADLK+S
Sbjct: 292 LSDSLWSWLTIYSKPDLGSVDANSSASRRRWC-----------VEGCYSYGLYADLKISS 340
Query: 305 SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS 364
+DW + F++WW+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS KP+ + DSG
Sbjct: 341 HLDWQTHFDKWWKGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGW 400
Query: 365 RDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV 424
RDL KSKWRLAKGDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSV
Sbjct: 401 RDLRKSKWRLAKGDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSV 460
Query: 425 YEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRD 484
YEPNEYPS MQRLY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP+EFI+LHRD
Sbjct: 461 YEPNEYPSDMQRLYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRD 520
Query: 485 ALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVR 544
ALES VSS IHHWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR QLF +PHPVR
Sbjct: 521 ALESPHVSSLIHHWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVR 580
Query: 545 QTATWEK-GSRKCKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHARHLSPRYYN 602
+ EK SR + + + VDN S++ A YL+E EEA AFSDHA HL P+Y+
Sbjct: 581 LGFSREKEQSRNELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHLCPKYHL 640
Query: 603 HQESFGMYISPTK-EFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQ 661
+ + SP +S + S P + ++ + S I L YLLEH+EV DE S E Q
Sbjct: 641 RE---NLVESPLHVSYSENTKKVNTSLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQ 697
Query: 662 ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEE 721
ELL WRQ + SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE GDLP +++E
Sbjct: 698 ELLQWRQDFC-TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKE 756
Query: 722 LPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAA 781
LP T+++VEACI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A+ +RL YAA
Sbjct: 757 LPPPTQVIVEACIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAA 816
Query: 782 NFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMIL 841
+FAK G LK MG+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L+P AV+ ++L
Sbjct: 817 SFAKQGVLKVMGTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVL 876
Query: 842 PAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASA 901
P+IQKIL TTGYSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY +P K SASA
Sbjct: 877 PSIQKILLTTGYSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASA 936
Query: 902 ASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPL 961
ASVLLIGSSEELG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG FIV+QMLPL
Sbjct: 937 ASVLLIGSSEELGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPL 996
Query: 962 LKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHV 1021
L+HV ID+S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ EL + R CLHV
Sbjct: 997 LEHVVCFCIDLSSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHV 1056
Query: 1022 MVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSL 1081
VLM NLE+ VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS++ +D S SL
Sbjct: 1057 RVLMQKNLELRVLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFSEKSTDASDSL 1116
Query: 1082 GGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNW 1141
++ + K ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLLEQ+LL++HNW
Sbjct: 1117 SWKIRTAEQKFHPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLLEQYLLKHHNW 1176
Query: 1142 KWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQ 1201
KWEYTG SSR + E RP+L +G S+ P K+LLNG G S+PQSQG R+S +L
Sbjct: 1177 KWEYTGRSSRYNME----ARPVLKQGPASKHTP-KVLLNGSGRSVPQSQGLRNSNHLKLH 1231
Query: 1202 RRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASI 1261
V VE QEA N + EPW WFP+P WDG D +GR G KDE+ WKI+AS+
Sbjct: 1232 IHV------PVEGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKDENRWKIRASV 1284
Query: 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDI 1321
LSS RAHHGALRS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y+ HEEVVNDI
Sbjct: 1285 LSSARAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDI 1344
Query: 1322 CVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNS 1381
+LSS+G++ASCDGT+HVWNSQTGKL+S+F+E D S S SK N++ S
Sbjct: 1345 GILSSTGKVASCDGTIHVWNSQTGKLISLFSESPSDQDQASSDPS--SKNNSNPCNRHAS 1402
Query: 1382 NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1441
+ LSSGI FD NLYTC+H++E +++L+VG G G+LRFID+ +GQKL LW GE E G
Sbjct: 1403 HGLSSGI----FDENLYTCMHYLEYMDQLIVGTGFGALRFIDLARGQKLELWGGEAIESG 1458
Query: 1442 FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1501
F SLVSA+C+ GS+ GA SPSWIAAG SSGQCRLFD+R I+SWRAHDGYVTK
Sbjct: 1459 FTSLVSALCSGGSQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTK 1518
Query: 1502 LAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIG 1561
L APE HLLVSSSLDKTLRIWDLR++W QP V KGH +G+SGFS+WG+DVISIS N IG
Sbjct: 1519 LVAPESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKDVISISRNNIG 1578
Query: 1562 LSSLSKS--ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
+ SL+KS +E Q R++PQKLYM + G + S LS+I +LPFSRLF+VG DG+LR+C
Sbjct: 1579 IFSLAKSQDEEEQQQQRIIPQKLYMAEKGGRVKSDLSTICVLPFSRLFIVGAHDGHLRIC 1638
Query: 1620 C 1620
C
Sbjct: 1639 C 1639
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357128121|ref|XP_003565724.1| PREDICTED: uncharacterized protein LOC100837771 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1692 bits (4382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 851/1545 (55%), Positives = 1093/1545 (70%), Gaps = 63/1545 (4%)
Query: 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGV 162
+T L P+ + G S S EL +++++ +E+ V+ SLNLL E K SG +FL +G
Sbjct: 123 VTKLIPVYYSGRISISEIRELIASYMNLKVEENVISSLNLLCENKISGSAGLDFLNFVGF 182
Query: 163 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRF 222
+FD+ GC+RHPN+ PVLG++++S + PK PYTLENI+ +SP AL S+WH+RF
Sbjct: 183 SAFDDLHPSGCVRHPNILPVLGVVESSDCCYMLHPKAPYTLENIMHYSPKALCSDWHIRF 242
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV----GFNSIADWCTI 278
LMYQ++SA+AYLH G+ H ++ PS +L++DS W +L I D V GF
Sbjct: 243 LMYQIISALAYLHDSGVHHGNLKPSTILMSDSLWPYLSISDIYHVRQNWGFERPKG---- 298
Query: 279 PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 338
++P C E CSS+ ++ L S+DW S F RWW GELSN+EYLL LNKLAGRRWG
Sbjct: 299 -STPSSCCVAEDCSSRPIHTSFDLLSSLDWSSHFKRWWAGELSNYEYLLVLNKLAGRRWG 357
Query: 339 DYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDEC 398
D FH VMPWVIDF+ +PDEN D G RDL+KSKWRLAKGDEQLDFTYSSSE+PHHVSDEC
Sbjct: 358 DPAFHPVMPWVIDFTVRPDENSDIGWRDLTKSKWRLAKGDEQLDFTYSSSEVPHHVSDEC 417
Query: 399 LSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYS 458
LSELAVCSYKARRL ++LR+AVRSVYEPNEYPS+MQRLYQWTPDECIP+FY DP+IF S
Sbjct: 418 LSELAVCSYKARRLSKTILRSAVRSVYEPNEYPSSMQRLYQWTPDECIPDFYSDPRIFVS 477
Query: 459 QHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV 518
H M+DLA+P W S EEFI LHRDALESDRVS ++HHWIDITFGYK+ G+A+++AKNV
Sbjct: 478 LHSEMSDLALPSWVTSSEEFICLHRDALESDRVSQQLHHWIDITFGYKLDGEASVEAKNV 537
Query: 519 MLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEKGSRKCKFVRSQNNNEVDNVSS-- 572
MLP S+P++PKS+GR QLFT PHP R +T + C +++ +N +V+S
Sbjct: 538 MLPPSDPSRPKSIGRRQLFTTPHPKRHISTPHPSYHNKVESCARCQAKGSNSTTDVASNG 597
Query: 573 -----LLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKEFSSESFVGTIS 627
+L + YL+E E+A F + HL P+Y N+ ++ Y S K S IS
Sbjct: 598 FIPPDMLSQVDYLEEFEQATIFMELEHHLDPKY-NYTDTSSCYCSSVKYPKSH-----IS 651
Query: 628 NPFENGSRHVLS---DIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDI 684
+ S VLS D D LE E ++ M YQELL W+QKS + + + DI
Sbjct: 652 DQEMLQSDTVLSVVPDFDFGSYLECFECDNSSPMGYQELLPWKQKSC---SVIEHHANDI 708
Query: 685 FSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSA 744
FSIGC+LAE++LRRPLFD+ LA Y E G LPG + ELP H +LVE+CI ++W RRPS+
Sbjct: 709 FSIGCMLAEIYLRRPLFDASLLAAYRETGMLPGALNELPVHVGVLVESCIQREWKRRPSS 768
Query: 745 KSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAAERCAPYC 804
K LL+SPYFP +V+++Y+F+APLQL+ G RL+Y A A G LKAMG F+AE CAPYC
Sbjct: 769 KHLLDSPYFPPSVQAAYMFLAPLQLLCTSGDRLKYVAKLASEGTLKAMGEFSAEMCAPYC 828
Query: 805 LPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLKVSLLQDS 864
LP V++ LSD + E LLKEF+KCLS +A + +IL IQKILQ YSHLKVSLLQDS
Sbjct: 829 LPFVSSSLSDVDTESGLCLLKEFLKCLSVQATKQLILHIIQKILQAPEYSHLKVSLLQDS 888
Query: 865 FVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPITVHQTIL 924
FVRE+W ++GKQ Y+E VHPLVI+NL +P+K ASAAS++LIGSSEELG+PIT+HQTIL
Sbjct: 889 FVRELWKKLGKQTYIENVHPLVIANLCNSPNKIIASAASIVLIGSSEELGIPITIHQTIL 948
Query: 925 PLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSW 984
PLI FG+G+C DGI+ +VRIGGLLGE+F V+Q+LPLL++V S ID S KPEP SW
Sbjct: 949 PLIHYFGKGLCADGIETLVRIGGLLGESFTVKQILPLLRNVILSCIDSSKVIKPEPQHSW 1008
Query: 985 SALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVAASTLMAI 1044
++ +LID L L+GLV+ LP + V+KEL++D+ CLH+ VLM +L++ V+QVAA+ L+ +
Sbjct: 1009 NSFALIDGLSALEGLVSVLPVKAVLKELLQDQVCLHIKVLMLIHLDLRVIQVAATALVDL 1068
Query: 1045 CQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQIESRMDL 1104
C RIGPD TA++VLPHLKELF ELAF E S S G LK+ K ++ESR+DL
Sbjct: 1069 CLRIGPDNTAIYVLPHLKELFAELAFYHESSAVSLPSEG-LKISKGNKSEPIKMESRIDL 1127
Query: 1105 VLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWK----WEYTGESSRISEENISAK 1160
+ LLYP AS +GIEKLR+CC+TW LLEQ L R +NWK W T EN+
Sbjct: 1128 MFLLYPFLASYVGIEKLRECCSTWFLLEQSLQRLYNWKPFSEWSKTA-------ENMKDP 1180
Query: 1161 RPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSN 1220
R S+ P +LL NG G S+ QS+ +++ N+ R+ S +E ++ N
Sbjct: 1181 RSQSGNCIPSEVFPTELLFNGAGLSVSQSEITKTGWNVAVSRQ-----GSRLEHGTSSDN 1235
Query: 1221 LMKC----EPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVA 1276
L +PWFWFP+P +SW PDFLGR GLKDE WKIKAS+L S RAH GALRS+A
Sbjct: 1236 LCSSTSGNQPWFWFPSPDSSWGTPDFLGRSSGLKDEFQWKIKASVLYSARAHPGALRSLA 1295
Query: 1277 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGT 1336
V DECTVFT G+GPGF G++Q+W+L +NC SGYYGHEEVVN IC+LS++G++ASCDGT
Sbjct: 1296 VHDDECTVFTGGVGPGFTGSIQRWQLPNMNCTSGYYGHEEVVNSICILSTTGKVASCDGT 1355
Query: 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1396
+HVWN QTGKL++ E S S + + +Q MLN + LS GILS AF G+
Sbjct: 1356 IHVWNGQTGKLIAAHTESST--------SFPLQTASVEQANMLNQDALSGGILSNAFRGS 1407
Query: 1397 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1456
LYT +H++ ++LV G+GNGS+RFIDI+Q +KLHLW+ + E+ F SLVSAIC+CGS+K
Sbjct: 1408 LYTTMHYMSSEDKLVAGMGNGSIRFIDISQDRKLHLWKSDSAEISFSSLVSAICSCGSDK 1467
Query: 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLD 1516
+ G V S SWIAAGLSSG CRL D RSG +IA WRAHDG++TKLA+PEDHL+VSSSLD
Sbjct: 1468 PRTGRLVDSSSWIAAGLSSGYCRLLDERSGKIIAVWRAHDGHITKLASPEDHLIVSSSLD 1527
Query: 1517 KTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHR 1576
KTLRIWDLRR +Q +F+ H++GI FSVWGQD++S+S NKI L+SL + E G +
Sbjct: 1528 KTLRIWDLRRKLETQSNIFRSHSDGIFDFSVWGQDLVSVSRNKISLTSLFRPTSEIGHQQ 1587
Query: 1577 LVPQKLYMVDNG--AKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
LV Q LY D G +KN+SVLS+IS+LP SRLF+VGTEDG+L++C
Sbjct: 1588 LVLQNLYSTDRGVKSKNMSVLSTISVLPLSRLFVVGTEDGFLKIC 1632
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53791494|dbj|BAD52616.1| BWF1-like protein [Oryza sativa Japonica Group] gi|222618325|gb|EEE54457.1| hypothetical protein OsJ_01553 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1630 bits (4221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1591 (52%), Positives = 1084/1591 (68%), Gaps = 97/1591 (6%)
Query: 68 ESRCLANGG-----GEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEE 122
ES L NG G++S D + NH + S +T L P ++ + S E
Sbjct: 86 ESNSLENGSQIDLQGKESTDADD------NHRKQ-SIINTITKLTPTRYLARAATSEIRE 138
Query: 123 LASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182
L S++L+ E+ V+ SLNLL E K G +FL G F++ G +RHPN+ PV
Sbjct: 139 LISSYLNLTTEESVMNSLNLLSENKIVGSGGLDFLNFTGFSEFNDIHPSGHVRHPNILPV 198
Query: 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 242
LG+++T + PK+PYTLENI+ +SP AL S+WH+RFL+YQ++SA+ YLH G+ H
Sbjct: 199 LGIVETYDCCYMLHPKSPYTLENIMHYSPEALWSDWHIRFLIYQIISALVYLHDSGVHHG 258
Query: 243 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE-GCSSQGLYADLK 301
++ PS + ++DS W +L I D V N P + CC E CSS+ +Y+
Sbjct: 259 NLKPSAIFMSDSLWPYLSISDICPVKQNCGFAESKRPA--LTLCCFEEDCSSRAIYSGFN 316
Query: 302 LSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFD 361
LS S+DW S RWW GELSN+EY+L LNKLAGRRWGD FH VMPWVIDF+ +PDEN D
Sbjct: 317 LSSSLDWQSYSKRWWMGELSNYEYILVLNKLAGRRWGDPAFHTVMPWVIDFTVRPDENSD 376
Query: 362 SGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAV 421
G RDL+KSKWRLAKGDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRLP ++LR+AV
Sbjct: 377 IGWRDLTKSKWRLAKGDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLPKNILRSAV 436
Query: 422 RSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKL 481
RSVYEPNEYPS MQRLYQWTPDECIPEFY DP+IF S H M++LA+P W S EEFI L
Sbjct: 437 RSVYEPNEYPSNMQRLYQWTPDECIPEFYSDPRIFVSLHSEMSNLALPSWVTSAEEFICL 496
Query: 482 HRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPH 541
HR+ALESDRVS ++HHWIDITFGYK+SG+++++AKNVMLP S+P KPKS GR QLFT+PH
Sbjct: 497 HRNALESDRVSRQLHHWIDITFGYKLSGESSVEAKNVMLPPSDPAKPKSTGRRQLFTKPH 556
Query: 542 PVRQTAT----WEKGSRKCKFVRSQNNNEVDNV-------SSLLPEAAYLQELEEAFAFS 590
P R T+T + C + +++ + ++ + YL+E E+A F
Sbjct: 557 PKRLTSTPHSTYHNKMESCAKCQGGSSSMTTGLLLKDHIPPAMSSQIDYLEEFEQANVFM 616
Query: 591 DHARHLSPRY--------------YNHQESFGMYISPTKEFSSESFVGTISNPFENGSRH 636
HL P Y YN YI P + S
Sbjct: 617 KLENHLCPIYDYANDSSSCCSSVKYNKSPCSNQYIVPPESVLS----------------- 659
Query: 637 VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL 696
V D D LE E +D YQELL W+QKS + + DIFS+GC+LAE++L
Sbjct: 660 VAPDFDFCSFLECFESDDSSPTGYQELLRWKQKSCSVNEYHAN---DIFSVGCILAEIYL 716
Query: 697 RRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPST 756
PLFD+ L+ Y E G LPG ++ELP H ++VE+CI ++W RRP AK LLES YFP +
Sbjct: 717 HGPLFDADLLSAYKETGILPGAIQELPIHVAVIVESCIQREWKRRPLAKHLLESQYFPPS 776
Query: 757 VKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAE 816
V+S+Y+F+APLQLI RL+Y A A G L+AMG AAE CAPYCLPLV+ LS +
Sbjct: 777 VRSAYMFLAPLQLICTPRDRLKYVAKLASEGTLRAMGECAAEMCAPYCLPLVSPSLSYID 836
Query: 817 AECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQ 876
E A LLKEF+KCLS +A + +IL IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ
Sbjct: 837 TEFALALLKEFVKCLSVQATKDLILHIIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQ 896
Query: 877 AYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICP 936
Y+E VHPLVI NLY +P+K +AS+AS++LIGSSEELG+PIT +QT+LP+IQCFG+G+CP
Sbjct: 897 TYIEKVHPLVIMNLYNSPNKITASSASIVLIGSSEELGIPITFNQTVLPIIQCFGKGLCP 956
Query: 937 DGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTL 996
DGID +VRIGGLLGE+F V+Q+LPLL++V S I+ S NKPEP SW++ +L+D L L
Sbjct: 957 DGIDTLVRIGGLLGESFTVKQILPLLRNVILSCIESSKINKPEPQHSWNSFALMDGLSAL 1016
Query: 997 DGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALH 1056
+GLV+ LP + +++EL++D+ CLH+ VL +L + V+QVAAS + +CQ+IGP+ TA +
Sbjct: 1017 EGLVSILPVKTILRELLQDQVCLHIKVLTQVHLNLRVIQVAASAFVDLCQQIGPENTATY 1076
Query: 1057 VLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLL 1116
VLPHLKELF ELAFS E S S G LK +++ESR+DLV LLYP A+L+
Sbjct: 1077 VLPHLKELFAELAFSHESSGLSVPTKG-LKFFDGNKTEPAKMESRIDLVFLLYPFLAALV 1135
Query: 1117 GIEKLRQCCATWLLLEQFLLRYHNWK--WEYTGESSRISEENISAKRPLLNKGSTSQCNP 1174
GIEKLR+C +TW LLEQ L R + WK +++G S EN+ +R ++S+ P
Sbjct: 1136 GIEKLRECYSTWFLLEQALQRLYGWKPSTDHSG-----SSENMKGQRFRSGNYTSSEPAP 1190
Query: 1175 AKLLL----NGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWF 1230
KL+ NG ++ +QGSR H SS + A+++ +PWFWF
Sbjct: 1191 TKLVAEIGKNGRNMTV-SNQGSRLE------------HGSSSDNLCASTS--GNQPWFWF 1235
Query: 1231 PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIG 1290
P+P + PDFLGR G+KDE PWKIKAS+L S RAH GALRS+AV DECT+FT G+G
Sbjct: 1236 PSPDRNCWAPDFLGRSAGMKDELPWKIKASVLYSARAHPGALRSLAVHDDECTIFTGGVG 1295
Query: 1291 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSV 1350
PGFKG++QKWEL +NC SGYYGHEEVVN IC+LS +G++ASCDGT+H+WN+QTGKL++V
Sbjct: 1296 PGFKGSIQKWELPNMNCSSGYYGHEEVVNSICILSITGKVASCDGTIHIWNAQTGKLIAV 1355
Query: 1351 FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1410
E S+ P + S +Q MLN + LS GILS AF G+LYT +H++E ++L
Sbjct: 1356 HTESSI-----SFPQQTAS---IEQANMLNQDALSGGILSNAFRGSLYTTMHYMESKDKL 1407
Query: 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIA 1470
V G+GNGS+RFIDI+Q QKLHLW+ + E+ F SLVSAIC+C S+K++ VAS SWIA
Sbjct: 1408 VAGMGNGSIRFIDISQDQKLHLWKSDSDEISFSSLVSAICSCASDKLKKDSTVASSSWIA 1467
Query: 1471 AGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS 1530
AGLSSG CRL D RSGN++A WRAHDG++TKLAAPEDHL+VSSSLDKTLR+WDLR N +
Sbjct: 1468 AGLSSGYCRLLDERSGNIVAVWRAHDGHITKLAAPEDHLIVSSSLDKTLRVWDLRGNLST 1527
Query: 1531 QPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGA- 1589
Q +++ H++GI FS WGQD++S+S NKI L+SLS+ E G +L Q LY D G
Sbjct: 1528 QSNIYRSHSDGIINFSAWGQDMVSVSRNKIALTSLSRPTSEIGHQQLTFQYLYSSDRGVK 1587
Query: 1590 -KNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619
KN+SVLS+IS+LP SRLF+VGTEDG+L++C
Sbjct: 1588 YKNMSVLSTISVLPLSRLFVVGTEDGFLKIC 1618
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53791495|dbj|BAD52617.1| BWF1-like protein [Oryza sativa Japonica Group] gi|215768435|dbj|BAH00664.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1612 bits (4175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/1517 (53%), Positives = 1051/1517 (69%), Gaps = 85/1517 (5%)
Query: 137 LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVI 196
+ SLNLL E K G +FL G F++ G +RHPN+ PVLG+++T +
Sbjct: 1 MNSLNLLSENKIVGSGGLDFLNFTGFSEFNDIHPSGHVRHPNILPVLGIVETYDCCYMLH 60
Query: 197 PKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
PK+PYTLENI+ +SP AL S+WH+RFL+YQ++SA+ YLH G+ H ++ PS + ++DS W
Sbjct: 61 PKSPYTLENIMHYSPEALWSDWHIRFLIYQIISALVYLHDSGVHHGNLKPSAIFMSDSLW 120
Query: 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE-GCSSQGLYADLKLSQSMDWHSQFNRW 315
+L I D V N P + CC E CSS+ +Y+ LS S+DW S RW
Sbjct: 121 PYLSISDICPVKQNCGFAESKRPA--LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRW 178
Query: 316 WRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLA 375
W GELSN+EY+L LNKLAGRRWGD FH VMPWVIDF+ +PDEN D G RDL+KSKWRLA
Sbjct: 179 WMGELSNYEYILVLNKLAGRRWGDPAFHTVMPWVIDFTVRPDENSDIGWRDLTKSKWRLA 238
Query: 376 KGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQ 435
KGDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRLP ++LR+AVRSVYEPNEYPS MQ
Sbjct: 239 KGDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLPKNILRSAVRSVYEPNEYPSNMQ 298
Query: 436 RLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRI 495
RLYQWTPDECIPEFY DP+IF S H M++LA+P W S EEFI LHR+ALESDRVS ++
Sbjct: 299 RLYQWTPDECIPEFYSDPRIFVSLHSEMSNLALPSWVTSAEEFICLHRNALESDRVSRQL 358
Query: 496 HHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEK 551
HHWIDITFGYK+SG+++++AKNVMLP S+P KPKS GR QLFT+PHP R T+T +
Sbjct: 359 HHWIDITFGYKLSGESSVEAKNVMLPPSDPAKPKSTGRRQLFTKPHPKRLTSTPHSTYHN 418
Query: 552 GSRKCKFVRSQNNNEVDNV-------SSLLPEAAYLQELEEAFAFSDHARHLSPRY---- 600
C + +++ + ++ + YL+E E+A F HL P Y
Sbjct: 419 KMESCAKCQGGSSSMTTGLLLKDHIPPAMSSQIDYLEEFEQANVFMKLENHLCPIYDYAN 478
Query: 601 ----------YNHQESFGMYISPTKEFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHL 650
YN YI P + S V D D LE
Sbjct: 479 DSSSCCSSVKYNKSPCSNQYIVPPESVLS-----------------VAPDFDFCSFLECF 521
Query: 651 EVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL 710
E +D YQELL W+QKS + + DIFS+GC+LAE++L PLFD+ L+ Y
Sbjct: 522 ESDDSSPTGYQELLRWKQKSCSVNEYHAN---DIFSVGCILAEIYLHGPLFDADLLSAYK 578
Query: 711 ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLI 770
E G LPG ++ELP H ++VE+CI ++W RRP AK LLES YFP +V+S+Y+F+APLQLI
Sbjct: 579 ETGILPGAIQELPIHVAVIVESCIQREWKRRPLAKHLLESQYFPPSVRSAYMFLAPLQLI 638
Query: 771 ARHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKC 830
RL+Y A A G L+AMG AAE CAPYCLPLV+ LS + E A LLKEF+KC
Sbjct: 639 CTPRDRLKYVAKLASEGTLRAMGECAAEMCAPYCLPLVSPSLSYIDTEFALALLKEFVKC 698
Query: 831 LSPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNL 890
LS +A + +IL IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ Y+E VHPLVI NL
Sbjct: 699 LSVQATKDLILHIIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQTYIEKVHPLVIMNL 758
Query: 891 YAAPHKSSASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLG 950
Y +P+K +AS+AS++LIGSSEELG+PIT +QT+LP+IQCFG+G+CPDGID +VRIGGLLG
Sbjct: 759 YNSPNKITASSASIVLIGSSEELGIPITFNQTVLPIIQCFGKGLCPDGIDTLVRIGGLLG 818
Query: 951 ETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVK 1010
E+F V+Q+LPLL++V S I+ S NKPEP SW++ +L+D L L+GLV+ LP + +++
Sbjct: 819 ESFTVKQILPLLRNVILSCIESSKINKPEPQHSWNSFALMDGLSALEGLVSILPVKTILR 878
Query: 1011 ELIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAF 1070
EL++D+ CLH+ VL +L + V+QVAAS + +CQ+IGP+ TA +VLPHLKELF ELAF
Sbjct: 879 ELLQDQVCLHIKVLTQVHLNLRVIQVAASAFVDLCQQIGPENTATYVLPHLKELFAELAF 938
Query: 1071 SQECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLL 1130
S E S S G LK +++ESR+DLV LLYP A+L+GIEKLR+C +TW L
Sbjct: 939 SHESSGLSVPTKG-LKFFDGNKTEPAKMESRIDLVFLLYPFLAALVGIEKLRECYSTWFL 997
Query: 1131 LEQFLLRYHNWK--WEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLL----NGVGW 1184
LEQ L R + WK +++G S EN+ +R ++S+ P KL+ NG
Sbjct: 998 LEQALQRLYGWKPSTDHSG-----SSENMKGQRFRSGNYTSSEPAPTKLVAEIGKNGRNM 1052
Query: 1185 SIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLG 1244
++ +QGSR H SS + A+++ +PWFWFP+P + PDFLG
Sbjct: 1053 TV-SNQGSRLE------------HGSSSDNLCASTS--GNQPWFWFPSPDRNCWAPDFLG 1097
Query: 1245 RVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1304
R G+KDE PWKIKAS+L S RAH GALRS+AV DECT+FT G+GPGFKG++QKWEL
Sbjct: 1098 RSAGMKDELPWKIKASVLYSARAHPGALRSLAVHDDECTIFTGGVGPGFKGSIQKWELPN 1157
Query: 1305 INCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364
+NC SGYYGHEEVVN IC+LS +G++ASCDGT+H+WN+QTGKL++V E S+ P
Sbjct: 1158 MNCSSGYYGHEEVVNSICILSITGKVASCDGTIHIWNAQTGKLIAVHTESSI-----SFP 1212
Query: 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1424
+ S +Q MLN + LS GILS AF G+LYT +H++E ++LV G+GNGS+RFIDI
Sbjct: 1213 QQTAS---IEQANMLNQDALSGGILSNAFRGSLYTTMHYMESKDKLVAGMGNGSIRFIDI 1269
Query: 1425 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1484
+Q QKLHLW+ + E+ F SLVSAIC+C S+K++ VAS SWIAAGLSSG CRL D R
Sbjct: 1270 SQDQKLHLWKSDSDEISFSSLVSAICSCASDKLKKDSTVASSSWIAAGLSSGYCRLLDER 1329
Query: 1485 SGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1544
SGN++A WRAHDG++TKLAAPEDHL+VSSSLDKTLR+WDLR N +Q +++ H++GI
Sbjct: 1330 SGNIVAVWRAHDGHITKLAAPEDHLIVSSSLDKTLRVWDLRGNLSTQSNIYRSHSDGIIN 1389
Query: 1545 FSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGA--KNLSVLSSISILP 1602
FS WGQD++S+S NKI L+SLS+ E G +L Q LY D G KN+SVLS+IS+LP
Sbjct: 1390 FSAWGQDMVSVSRNKIALTSLSRPTSEIGHQQLTFQYLYSSDRGVKYKNMSVLSTISVLP 1449
Query: 1603 FSRLFLVGTEDGYLRLC 1619
SRLF+VGTEDG+L++C
Sbjct: 1450 LSRLFVVGTEDGFLKIC 1466
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1620 | ||||||
| TAIR|locus:1006230455 | 1639 | AT5G18525 [Arabidopsis thalian | 0.834 | 0.824 | 0.599 | 0.0 | |
| DICTYBASE|DDB_G0268088 | 2179 | lvsG "BEACH domain-containing | 0.125 | 0.093 | 0.444 | 1.6e-97 | |
| UNIPROTKB|Q562E7 | 1941 | WDR81 "WD repeat-containing pr | 0.220 | 0.184 | 0.405 | 3.8e-84 | |
| UNIPROTKB|E2R4W6 | 1933 | WDR81 "Uncharacterized protein | 0.222 | 0.186 | 0.409 | 1.1e-82 | |
| MGI|MGI:2681828 | 1934 | Wdr81 "WD repeat domain 81" [M | 0.223 | 0.187 | 0.411 | 1.7e-82 | |
| RGD|1311334 | 1933 | Wdr81 "WD repeat domain 81" [R | 0.222 | 0.186 | 0.408 | 8.5e-80 | |
| FB|FBgn0032395 | 1953 | CG6734 [Drosophila melanogaste | 0.141 | 0.117 | 0.486 | 4.4e-64 | |
| UNIPROTKB|E1BRH2 | 3511 | WDFY3 "Uncharacterized protein | 0.061 | 0.028 | 0.379 | 7e-21 | |
| UNIPROTKB|E1BRH3 | 3529 | WDFY3 "Uncharacterized protein | 0.061 | 0.028 | 0.379 | 7.2e-21 | |
| UNIPROTKB|E2RLD7 | 3509 | WDFY3 "Uncharacterized protein | 0.061 | 0.028 | 0.379 | 1e-20 |
| TAIR|locus:1006230455 AT5G18525 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4121 (1455.7 bits), Expect = 0., P = 0.
Identities = 837/1397 (59%), Positives = 1028/1397 (73%)
Query: 3 NSSSENLLASQFILVYCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATST 62
+ SSE AS C S E+ ++++ EY+ + G ++ + +V + S
Sbjct: 47 SDSSEEFSAS------CSSCESTS-SQFILEYLRKDEHGCLAKYVDKFVVKD--REGNSN 97
Query: 63 DSLRDESRCL--ANGGGEKSKD----RIEYGTWICNHSGRFSCSRIMTALFPIAFIGICS 116
D++ + CL + G + ++D I G+ C HSG FSC R + AL PIA I CS
Sbjct: 98 DAVESDE-CLDCSTSGSQATEDDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCS 156
Query: 117 YSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFL-RLIGVPSFDESSVPGCLR 175
S ++LAS+F C ED +L SL+ LI+GK+SGQ + +FL L+G+P +E S CLR
Sbjct: 157 ASELQKLASSFHYECPEDQILASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLR 216
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HPN++PVLGLL +S + SV+PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH
Sbjct: 217 HPNLSPVLGLLTSSDCLVSVLPKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLH 276
Query: 236 SLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQG 295
L ++H + PSN+LL+DS WSWL I KP +G S+ D ++ C+EGC S G
Sbjct: 277 GLKVSHGDIRPSNILLSDSLWSWLTIYSKPDLG--SV-D--ANSSASRRRWCVEGCYSYG 331
Query: 296 LYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTK 355
LYADLK+S +DW + F++WW+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS K
Sbjct: 332 LYADLKISSHLDWQTHFDKWWKGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKK 391
Query: 356 PDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLS 415
P+ + DSG RDL KSKWRLAKGDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLS
Sbjct: 392 PENDSDSGWRDLRKSKWRLAKGDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLS 451
Query: 416 VLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSP 475
VLR AVRSVYEPNEYPS MQRLY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP
Sbjct: 452 VLRKAVRSVYEPNEYPSDMQRLYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSP 511
Query: 476 EEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQ 535
+EFI+LHRDALES VSS IHHWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR Q
Sbjct: 512 DEFIRLHRDALESPHVSSLIHHWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQ 571
Query: 536 LFTQPHPVRQTATWEKG-SRKCKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHA 593
LF +PHPVR + EK SR + + + VDN S++ A YL+E EEA AFSDHA
Sbjct: 572 LFFRPHPVRLGFSREKEQSRNELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHA 631
Query: 594 RHLSPRYYNHQESFGMYISPTKEFSSESF--VGTISNPFENGSRHVLSDIDLEYLLEHLE 651
HL P+Y+ + + SP SE+ V T S P + ++ + S I L YLLEH+E
Sbjct: 632 THLCPKYHLREN---LVESPLHVSYSENTKKVNT-SLPGTSKNKGLSSRISLNYLLEHME 687
Query: 652 VEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE 711
V DE S E QELL WRQ + SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE
Sbjct: 688 VRDEASTELQELLQWRQDFC-TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLE 746
Query: 712 NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIA 771
GDLP +++ELP T+++VEACI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A
Sbjct: 747 GGDLPELIKELPPPTQVIVEACIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLA 806
Query: 772 RHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCL 831
+ +RL YAA+FAK G LK MG+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L
Sbjct: 807 KGQTRLCYAASFAKQGVLKVMGTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSL 866
Query: 832 SPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLY 891
+P AV+ ++LP+IQKIL TTGYSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY
Sbjct: 867 TPMAVQRLVLPSIQKILLTTGYSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLY 926
Query: 892 AAPHKXXXXXXXVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGE 951
+P K VLLIGSSEELG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG
Sbjct: 927 NSPDKISASAASVLLIGSSEELGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGV 986
Query: 952 TFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKE 1011
FIV+QMLPLL+HV ID+S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ E
Sbjct: 987 NFIVKQMLPLLEHVVCFCIDLSSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHE 1046
Query: 1012 LIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFS 1071
L + R CLHV VLM NLE+ VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS
Sbjct: 1047 LTKGRLCLHVRVLMQKNLELRVLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFS 1106
Query: 1072 QECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLL 1131
++ +D S SL ++ + K ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLL
Sbjct: 1107 EKSTDASDSLSWKIRTAEQKFHPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLL 1166
Query: 1132 EQFLLRYHNWKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQG 1191
EQ+LL++HNWKWEYTG SSR N+ A RP+L +G S+ P K+LLNG G S+PQSQG
Sbjct: 1167 EQYLLKHHNWKWEYTGRSSRY---NMEA-RPVLKQGPASKHTP-KVLLNGSGRSVPQSQG 1221
Query: 1192 SRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKD 1251
R+S +L +++ H VE QEA N + EPW WFP+P WDG D +GR G KD
Sbjct: 1222 LRNSNHL----KLH-IHVP-VEGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKD 1274
Query: 1252 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY 1311
E+ WKI+AS+LSS RAHHGALRS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y
Sbjct: 1275 ENRWKIRASVLSSARAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSY 1334
Query: 1312 YGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXKI 1371
+ HEEVVNDI +LSS+G++ASCDGT+HVWNSQTGKL+S+F+E K
Sbjct: 1335 HAHEEVVNDIGILSSTGKVASCDGTIHVWNSQTGKLISLFSESPSDQDQASSDPSS--KN 1392
Query: 1372 NTDQVGMLNSNTLSSGI 1388
N++ S+ LSSGI
Sbjct: 1393 NSNPCNRHASHGLSSGI 1409
|
|
| DICTYBASE|DDB_G0268088 lvsG "BEACH domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 1.6e-97, Sum P(8) = 1.6e-97
Identities = 97/218 (44%), Positives = 131/218 (60%)
Query: 392 HHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYC 451
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+TM+RLY+WTPDECIPEF+
Sbjct: 623 HHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPATMERLYRWTPDECIPEFFT 681
Query: 452 DPQIFYSQHPGMTDLAVPPWAG--SPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSG 509
D IF S H M DL +P W S +EFIK+H +ALESD VS ++H WID+TFGY +SG
Sbjct: 682 DSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDHVSKQLHSWIDLTFGYLLSG 741
Query: 510 QAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRSQNNNEVDN 569
+ AI AKN+ L + T P++ G +QLF PHP + K + K+ R Q +
Sbjct: 742 EEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHPKK------KYLKSLKYQRQQQTQQHQQ 793
Query: 570 VSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESF 607
+ P+ + E F++ + + NH +F
Sbjct: 794 QTQQQPQF----DTEFTIKFNESSFRYENQNINHNSTF 827
|
|
| UNIPROTKB|Q562E7 WDR81 "WD repeat-containing protein 81" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 660 (237.4 bits), Expect = 3.8e-84, Sum P(5) = 3.8e-84
Identities = 160/395 (40%), Positives = 220/395 (55%)
Query: 171 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 229
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 230 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNSIADWCTIPTSPMIG 285
A+ H G+A ++ ++ + + S L + ++P N A P +
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRLDLSAYERPEEDENEEA-----PVA-RDE 323
Query: 286 CCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMV 345
I QG Q + S W G +SNF YL+ LN+LAGRR GD +H V
Sbjct: 324 AGIVSQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPV 382
Query: 346 MPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------I 390
+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY + +
Sbjct: 383 LPWVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHV 437
Query: 391 PHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFY 450
PHH+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY
Sbjct: 438 PHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFY 496
Query: 451 CDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQ 510
DP IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+
Sbjct: 497 TDPSIFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGK 556
Query: 511 AAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
A+ KNV L + T S G +QLF QPHP R
Sbjct: 557 EAVKEKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
|
| UNIPROTKB|E2R4W6 WDR81 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 1.1e-82, Sum P(5) = 1.1e-82
Identities = 161/393 (40%), Positives = 220/393 (55%)
Query: 172 GCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLSA 230
G L P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L A
Sbjct: 211 GSLACPSLLQAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLRA 270
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTS---PMIGCC 287
+ H G+A ++ ++ + + S L + D + IP + P G
Sbjct: 271 MDACHRQGLACGALTLHHIAVDEKLCSELRL-DLSAYERPKEDESEEIPVARDGPGSGPG 329
Query: 288 IEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMP 347
EG G S + W G +SNF YL+ LN+LAGRR GD +H V+P
Sbjct: 330 EEGGGRPGCP-----SCQEELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLP 384
Query: 348 WVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPH 392
WV+DF+T P F RDL KSK+RL KGD+QLDFTY + +PH
Sbjct: 385 WVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGTGGGEPPHVPH 439
Query: 393 HVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCD 452
H+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY D
Sbjct: 440 HISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTD 498
Query: 453 PQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAA 512
P IF S HP M DL VP W GS +EF+ HR LES VS +HHWID+TFGYK+ G+ A
Sbjct: 499 PSIFCSIHPDMPDLDVPAWCGSSQEFVSAHRALLESPEVSQDLHHWIDLTFGYKLQGKEA 558
Query: 513 IDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
+ KNV L + T S G +QLF QPHP R
Sbjct: 559 VKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 591
|
|
| MGI|MGI:2681828 Wdr81 "WD repeat domain 81" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 659 (237.0 bits), Expect = 1.7e-82, Sum P(5) = 1.7e-82
Identities = 161/391 (41%), Positives = 218/391 (55%)
Query: 171 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 229
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 230 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 289
A+ H G+A ++ ++ + + S L + D S D + G I+
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL-DLSAYEMPS-EDENQEGSEEKNGTGIK 325
Query: 290 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 349
+ Q + W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 326 SEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 384
Query: 350 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS------------SSE---IPHHV 394
+DF+T P F RDL KSK+RL KGD+QLDFTY S E +PHH+
Sbjct: 385 VDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHHI 439
Query: 395 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 454
SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 440 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDPS 498
Query: 455 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 514
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 499 IFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVK 558
Query: 515 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
KNV L + T S G +QLF QPHP R
Sbjct: 559 EKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
|
| RGD|1311334 Wdr81 "WD repeat domain 81" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 645 (232.1 bits), Expect = 8.5e-80, Sum P(5) = 8.5e-80
Identities = 166/406 (40%), Positives = 227/406 (55%)
Query: 163 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 221
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLRAE------ALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNS-IADWC 276
F+++++L A+ H G+A ++ ++ + + S L + + P N +++
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 277 --TIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 334
T S G GC + +L+ +DW G +SNF YL+ LN+LAG
Sbjct: 318 DRTGVKSEKDGEGRPGCPT--CQKELR-GLVLDWV-------HGRVSNFYYLMQLNRLAG 367
Query: 335 RRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS-------- 386
RR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY
Sbjct: 368 RRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVA 422
Query: 387 ----SSE---IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQ 439
S E +PHH+SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+
Sbjct: 423 GGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQT 481
Query: 440 WTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWI 499
WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES VS +HHWI
Sbjct: 482 WTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESWEVSQDLHHWI 541
Query: 500 DITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 544
D+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 542 DLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
|
| FB|FBgn0032395 CG6734 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 4.4e-64, Sum P(4) = 4.4e-64
Identities = 123/253 (48%), Positives = 156/253 (61%)
Query: 315 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS-RDLSKSKWR 373
W G+LSNF+YL LN GR + +H +MPWV DFS + G+ RDL+KSK+R
Sbjct: 348 WCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWVTDFSGR-----GGGAWRDLTKSKYR 402
Query: 374 LAKGDEQLDFTYSSS---------------EIPHHVSDECLSELAVCSYKARRLPLSVLR 418
L KGD LD Y+ + + PHHVSD LSE+ Y ARR P S+L
Sbjct: 403 LNKGDVHLDLMYAHASQHGSADGSYQAIGDQAPHHVSD-FLSEITYFVYMARRTPQSILC 461
Query: 419 TAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEF 478
VR ++ P EYP ++QRL +WTPDECIPEFY DP IF S H + DL +P WA PE+F
Sbjct: 462 AHVRPIWVPAEYPVSIQRLQEWTPDECIPEFYSDPMIFKSIHEDLPDLELPAWATCPEDF 521
Query: 479 IKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSV-GRLQLF 537
I HR+ALES VS R+HHWID+ FGYK+SG+AA+ +KNV L + + S G +QLF
Sbjct: 522 ICKHREALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNVCLTLVDQHRNLSQRGIVQLF 581
Query: 538 TQPHPVRQTAT-W 549
HP R+ AT W
Sbjct: 582 ASAHPPRRYATPW 594
|
|
| UNIPROTKB|E1BRH2 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 7.0e-21, Sum P(5) = 7.0e-21
Identities = 44/116 (37%), Positives = 66/116 (56%)
Query: 444 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 492
E IPEF+ P+ + + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2829 ELIPEFFYLPEFLLNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDFVS 2888
Query: 493 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 548
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2889 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2938
|
|
| UNIPROTKB|E1BRH3 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 7.2e-21, Sum P(5) = 7.2e-21
Identities = 44/116 (37%), Positives = 66/116 (56%)
Query: 444 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 492
E IPEF+ P+ + + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2847 ELIPEFFYLPEFLLNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDFVS 2906
Query: 493 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 548
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2907 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2956
|
|
| UNIPROTKB|E2RLD7 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 1.0e-20, Sum P(6) = 1.0e-20
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 444 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 492
E IPEF+ P+ ++ + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2828 ELIPEFFYLPEFLFNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVS 2887
Query: 493 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 548
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2888 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2937
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1620 | |||
| cd06071 | 275 | cd06071, Beach, BEACH (Beige and Chediak-Higashi) | 2e-82 | |
| smart01026 | 280 | smart01026, Beach, Beige/BEACH domain | 1e-77 | |
| pfam02138 | 274 | pfam02138, Beach, Beige/BEACH domain | 5e-71 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-20 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-16 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 9e-12 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-12 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-11 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 8e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-09 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-09 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-09 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-08 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-08 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-08 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-07 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-07 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 5e-07 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 9e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-06 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-06 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-06 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 1e-06 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-06 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-06 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-06 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 7e-06 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 7e-06 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-05 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 3e-05 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 3e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 4e-05 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-05 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-05 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 7e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 9e-05 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-04 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 1e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-04 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-04 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-04 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-04 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 3e-04 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-04 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-04 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 4e-04 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 5e-04 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 5e-04 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 8e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 8e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 0.001 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 0.001 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 0.001 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 0.001 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 0.001 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.001 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 0.001 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 0.001 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 0.001 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 0.002 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.002 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.002 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 0.003 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 0.003 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 0.004 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 0.004 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 0.004 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 0.004 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 0.004 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 0.004 |
| >gnl|CDD|100117 cd06071, Beach, BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 2e-82
Identities = 94/278 (33%), Positives = 129/278 (46%), Gaps = 50/278 (17%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSKS 370
+W GE+SNFEYL++LN LAGR + D + + + PWVI T + + + S RDLSK
Sbjct: 2 KKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKP 61
Query: 371 KWRLAKGDEQLDFTYSSSEI---------PHHVSDECLSELAVCSYKARRLP-----LSV 416
L K QL S+ H S+ + V Y R P LS+
Sbjct: 62 IGALNKERLQLLKERYESDSDDSDPPFHYGSHYSNPAI----VLYYLVRLEPFTTLHLSL 117
Query: 417 LRTAVRS-VYEPNEYPSTMQRLYQ--WTPDECIPEFYCDPQIFYSQHP---------GMT 464
+ N PS+ + + E IPEFY P+ F + + +
Sbjct: 118 QGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFFLNINKFDFGKQDGEKVN 177
Query: 465 DLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 524
D+ +PPWA SPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A+ AKNV P +
Sbjct: 178 DVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTY 237
Query: 525 P------------------TKPKSVGRLQLFTQPHPVR 544
+QLFT+PHP R
Sbjct: 238 EGSVDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. Length = 275 |
| >gnl|CDD|214982 smart01026, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 258 bits (661), Expect = 1e-77
Identities = 94/287 (32%), Positives = 129/287 (44%), Gaps = 63/287 (21%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKS 370
+W GE+SNFEYL+ LN LAGR + D T + V PWV+ D++++ D + S RDLSK
Sbjct: 2 QKWQNGEISNFEYLMHLNTLAGRSYNDLTQYPVFPWVLADYTSETLDLSNPSTFRDLSK- 60
Query: 371 KWRLAKGDEQLDFTYS-------SSEIPHHVSDECLSELAVCSYKARRLPL--------- 414
A E+L+F Y P H S V Y R P
Sbjct: 61 PIG-ALNPERLEFFYERYEELEDPDIPPFHYGTHYSSAGIVLYYLIRLEPFTTLFLQLQG 119
Query: 415 ------SVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHP------- 461
L +V + + +M + E IPEF+ P+ + +
Sbjct: 120 GRFDHADRLFHSVAATWRSA-SLESMTDVK-----ELIPEFFYLPEFLVNINGFDFGTRQ 173
Query: 462 ---GMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKN 517
+ D+ +PPWA GSPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A++A N
Sbjct: 174 DGEDVDDVELPPWAKGSPEEFIRKHREALESEYVSQHLHHWIDLIFGYKQRGKEAVEALN 233
Query: 518 VMLP----------SSEPTKPKSVGR----------LQLFTQPHPVR 544
V P S E + QLF +PHP R
Sbjct: 234 VFHPLTYEGAVDLDSIEDPVERKALEGQIHNFGQTPKQLFKEPHPPR 280
|
The BEACH domain was described in the BEIGE protein (D1035670) and in the highly homologous CHS protein. The BEACH domain is usually followed by a series of WD repeats. The function of the BEACH domain is unknown. Length = 280 |
| >gnl|CDD|216896 pfam02138, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 5e-71
Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 43/274 (15%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSK- 369
+W GE+SNFEYL+ LN LAGR + D + + V PWV+ D++++ D N S RDLSK
Sbjct: 2 EKWQNGEISNFEYLMLLNTLAGRSFNDLSQYPVFPWVLADYTSETLDLNDPSTYRDLSKP 61
Query: 370 ----SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 425
++ RL K E+ + P H S +V Y R P + L ++
Sbjct: 62 IGALNEERLKKFKERYEE-LDEVGPPFHYGSHYSSPGSVLHYLIRLEPFTTLHIELQGGK 120
Query: 426 --EPNEYPSTMQRLYQWTPD------ECIPEFYCDPQIFYSQHP---------GMTDLAV 468
+ S+++ ++ + E IPEF+ P+ + + + D+ +
Sbjct: 121 FDHADRLFSSIEEAWKSVSESMNDVKELIPEFFYLPEFLKNINNFDLGKRDGEKVDDVEL 180
Query: 469 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP 528
PPWA SPEEF+ +R ALESD VS +H+WID+ FGYK G+ AI+AKNV P +
Sbjct: 181 PPWAKSPEEFVYKNRKALESDYVSENLHNWIDLIFGYKQRGEEAIEAKNVFHPLTYEDIV 240
Query: 529 ----------------KSVGRL--QLFTQPHPVR 544
+ G+ QLFT+PHP R
Sbjct: 241 DKIKDPVEREAIEAQISNFGQTPKQLFTEPHPKR 274
|
Length = 274 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 8e-20
Identities = 65/321 (20%), Positives = 123/321 (38%), Gaps = 66/321 (20%)
Query: 1265 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVL 1324
++ H G + VA D + T GT++ W+L + GH V D+
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGD----GTIKVWDLETGELLRTLKGHTGPVRDVAAS 60
Query: 1325 SSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382
+ +AS D T+ +W+ +TG+ + H SS ++ ++
Sbjct: 61 ADGTYLASGSSDKTIRLWDLETGECVRTLTG------HTSYVSS-VAFSPDGRI------ 107
Query: 1383 TLSSGILSTAFDGN-----------LYTCLHH---IECV------ERLVVGIGNGSLRFI 1422
+ S++ D L T H + V + +G+++
Sbjct: 108 -----LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW 162
Query: 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1482
D+ G+ + T G V+++ + + + S G +L+D
Sbjct: 163 DLRTGKCVA------TLTGHTGEVNSVAFSPDGEK-----------LLSSSSDGTIKLWD 205
Query: 1483 VRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1541
+ +G + + R H+ V +A +P+ +LL S S D T+R+WDLR Q GHTN
Sbjct: 206 LSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQ--TLSGHTNS 263
Query: 1542 ISGFSVW--GQDVISISNNKI 1560
++ + G+ + S S +
Sbjct: 264 VTSLAWSPDGKRLASGSADGT 284
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 2e-16
Identities = 64/318 (20%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 1311 YYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1368
GH V + +A+ DGT+ VW+ +TG+LL
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTL----------------- 47
Query: 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ 1428
K +T V + ++A L G + ++R D+ G+
Sbjct: 48 -KGHTGPVR---------DVAASADG-------------TYLASGSSDKTIRLWDLETGE 84
Query: 1429 KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV 1488
+ G S VS++ +++ +++DV +G
Sbjct: 85 CVRTLTG------HTSYVSSVAF-----------SPDGRILSSSSRDKTIKVWDVETGKC 127
Query: 1489 IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSV 1547
+ + R H +V +A +P+ + SSS D T+++WDLR GHT ++ +
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA--TLTGHTGEVNSVA- 184
Query: 1548 WGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS-------SISI 1600
S K+ SS + KL+ + G K L L S++
Sbjct: 185 -----FSPDGEKLLSSSSDGTI-----------KLWDLSTG-KCLGTLRGHENGVNSVAF 227
Query: 1601 LPFSRLFLVGTEDGYLRL 1618
P L G+EDG +R+
Sbjct: 228 SPDGYLLASGSEDGTIRV 245
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 7e-16
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 69/275 (25%)
Query: 1255 WKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG 1313
W ++ + ++ H + SVA D + ++ T++ W++ C++ G
Sbjct: 78 WDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSS---SRDKTIKVWDVETGKCLTTLRG 133
Query: 1314 HEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371
H + VN + +AS DGT+ +W+ +TGK ++ + H
Sbjct: 134 HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL------TGH----------- 176
Query: 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH 1431
+ + S AF + E+L+ +G+++ D++ G+ L
Sbjct: 177 -------------TGEVNSVAFSPDG----------EKLLSSSSDGTIKLWDLSTGKCLG 213
Query: 1432 LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS--WIAAGLSSGQCRLFDVRSGNVI 1489
RG + + + SP +A+G G R++D+R+G +
Sbjct: 214 TLRGHE---------NGVNSV----------AFSPDGYLLASGSEDGTIRVWDLRTGECV 254
Query: 1490 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
+ H VT LA +P+ L S S D T+RIWD
Sbjct: 255 QTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 9e-12
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + G+ + + V+ +L+++L+ + L SE + ++ Q+L +
Sbjct: 48 LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKL-SEDEILRILLQILEGLE 106
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
YLHS GI HR + P N+LL + + D
Sbjct: 107 YLHSNGIIHRDLKPENILLDSDNGK-VKLAD 136
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 69.0 bits (167), Expect = 9e-12
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 37/310 (11%)
Query: 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1314
++ ++ H ++ S+A D + + GT++ W+L +S GH
Sbjct: 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS---SLDGTIKLWDLRTGKPLSTLAGH 197
Query: 1315 EEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL-SVFAEQSMDSLHGGSPSSS--I 1368
+ V+ + G + S DGT+ +W+ TGKLL S + S + SP S
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLA 257
Query: 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ 1428
S + + + + + SS + + + + + + L G +G++R D+ G+
Sbjct: 258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK 317
Query: 1429 KLHLWR-----GEPTELGFPSLVSAICACGSE--------------KMQAGGAVASPSW- 1468
L G + L F S + + GS+ G S
Sbjct: 318 LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVS 377
Query: 1469 -------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1520
+++G + G RL+D+ +G+++ + H VT L +P+ L S S D T+R
Sbjct: 378 FSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIR 437
Query: 1521 IWDLRRNWPS 1530
+WDL+ + S
Sbjct: 438 LWDLKTSLKS 447
|
Length = 466 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 1e-11
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 27/105 (25%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPYT--------------LENILQFSPNALKSEW 218
LRH N+ GL+ + P +P L +++ SP L ++
Sbjct: 55 HLRHENII---------GLLDILRPPSPEDFNDVYIVTELMETDLHKVIK-SPQPL-TDD 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
H+++ +YQ+L + YLHS + HR + PSN+L+ +C L ICD
Sbjct: 104 HIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DLKICD 146
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 8e-11
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRH N+ + + G + V TL +L+ SP L + VR ++QLL AIAY
Sbjct: 57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPD-AVRSYIWQLLQAIAY 115
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
HS I HR + P N+L+++S L +CD
Sbjct: 116 CHSHNIIHRDIKPENILVSES--GVLKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 61.6 bits (148), Expect = 2e-09
Identities = 76/335 (22%), Positives = 124/335 (37%), Gaps = 73/335 (21%)
Query: 1290 GPGFKGTVQKWEL-TRINCVSGYYGHEEVVNDICVLSSSGRIASC---DGTLHVWNSQTG 1345
GTV+ W+L T + GH E V + +AS DGT+ +W+ +TG
Sbjct: 129 SSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG 188
Query: 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1405
K LS A +TD V L + ++++
Sbjct: 189 KPLSTLAG------------------HTDPVSSLAFSPDGGLLIASGSS----------- 219
Query: 1406 CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1465
+G++R D++ G+ L ++ S
Sbjct: 220 ----------DGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP-----------------D 252
Query: 1466 PSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
S +A+G S G RL+D+RS +++ + H V +A +P+ LL S S D T+R+WD
Sbjct: 253 GSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312
Query: 1524 LRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLY 1583
L KGH +S S + D + + +DG RL +
Sbjct: 313 LETGKLLSSLTLKGHEGPVSSLS-FSPDGSLLVS----------GGSDDGTIRLWDLRTG 361
Query: 1584 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618
+ S + S+S P R+ G+ DG +RL
Sbjct: 362 KPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRL 396
|
Length = 466 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 2e-09
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
SE RF + Q+LSA+ YLHS GI HR + P N+LL +
Sbjct: 95 SEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDG 134
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-09
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 205 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
NIL+ + H R++MYQLL A+ Y+HS + HR + PSN+LL C
Sbjct: 102 NILE--------DVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC 144
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-08
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ +L + + G + V L +++ L E ++ +YQLL +A
Sbjct: 54 ELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGL-PESLIKSYLYQLLQGLA 112
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ HS GI HR + P N+L+ L + D
Sbjct: 113 FCHSHGILHRDLKPENLLINTEG--VLKLAD 141
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
SE + + Q+L + YLHS GI HR + P N+LL
Sbjct: 96 SEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILL 131
|
Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 3e-08
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 174 LRHPNVAPVLGLL--KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
LRHPN+ + ++ K G I V + L +L SP +E ++ M QLL +
Sbjct: 55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLD-SPEVKFTESQIKCYMKQLLEGL 113
Query: 232 AYLHSLGIAHRSVCPSNVLLTD 253
YLHS GI HR + SN+L+ +
Sbjct: 114 QYLHSNGILHRDIKGSNILINN 135
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-07
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 174 LRHPNVAPVLGLLKTSGL----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLS 229
+H N+ + +L+ G + V+ L +I+ S L +E H+R+ +YQLL
Sbjct: 61 FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII-HSDQPL-TEEHIRYFLYQLLR 118
Query: 230 AIAYLHSLGIAHRSVCPSNVLLTDSC 255
+ Y+HS + HR + PSN+L+ + C
Sbjct: 119 GLKYIHSANVIHRDLKPSNLLVNEDC 144
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (131), Expect = 2e-07
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L+HPN+ +L ++ T + V L+ L P L S ++ +MYQLL +AY
Sbjct: 55 LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPL-SPNLIKSIMYQLLRGLAY 113
Query: 234 LHSLGIAHRSVCPSNVLLTDS 254
HS I HR + P N+L+
Sbjct: 114 CHSHRILHRDLKPQNILINRD 134
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 5e-07
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 210 SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S L + H ++ +YQLL + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 101 SSQTLSDD-HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 9e-07
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
S+ H++FL+YQ+L + Y+HS GI HR + PSN+ + + C
Sbjct: 116 SDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLAVYL------ENGDLPGVMEELPSHTRILVEACITK 736
DI+S+G +L EL +P F + L P ++ + L+ + K
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVK 237
Query: 737 DWTRRPSAKSLLESPYF 753
D +R +A+ L+ P+F
Sbjct: 238 DPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
SE RF +++ A+ YLHSLGI +R + P N+LL
Sbjct: 91 SEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA 128
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-06
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 174 LRHPNVAPVLGLLKTSGL--------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
+H NV L +L+ + +T ++ L I+ SP L S+ HV+ +Y
Sbjct: 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSD---LHKII-VSPQPLSSD-HVKVFLY 110
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
Q+L + YLHS GI HR + P N+L+ +C L ICD
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNSNC--VLKICD 146
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 203 LENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
L NI++ L E HV+FL+YQLL + Y+HS GI HR + PSNV + + C
Sbjct: 106 LNNIVKC--QKLSDE-HVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-06
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
+HP V +L + V+ P L +L+ L E V+ M LL +AY
Sbjct: 56 CQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPL-PEAQVKSYMRMLLKGVAY 114
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+H+ GI HR + P+N+L++ L I D
Sbjct: 115 MHANGIMHRDLKPANLLISAD--GVLKIAD 142
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 51.3 bits (121), Expect = 3e-06
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK-SEWHVRFLMYQLLSAIAY 233
PN+ + + G + V+ +LE++L+ SE F++ Q+LSA+ Y
Sbjct: 57 PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
LHS GI HR + P N+LL + + D
Sbjct: 117 LHSKGIIHRDIKPENILLDRDG-RVVKLID 145
|
Length = 384 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRI------LVEA 732
D++S+G +L EL +P F + L + P + + P + L++
Sbjct: 181 DVWSLGVILYELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKK 239
Query: 733 CITKDWTRRPSAKSLLESPYF 753
C+ KD ++RP+A+ +L+ P+F
Sbjct: 240 CLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-06
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 174 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSA 230
L+HPN+ V ++ S L I V+ + L++++ L+SE V+ LM QLLS
Sbjct: 61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSE--VKCLMLQLLSG 118
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+A+LH I HR + SN+LL + L ICD
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNR--GILKICD 149
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+++L+ + L E + ++ +LL + YLHS GI HR + +N+LLT
Sbjct: 83 SLKDLLKSTNQTLT-ESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG 135
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 7e-06
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L HP V +L + GL V+PK L L L V + QLLSAI Y
Sbjct: 217 LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPL-GLAQVTAVARQLLSAIDY 275
Query: 234 LHSLGIAHRSVCPSNVLL 251
+H GI HR + NVL+
Sbjct: 276 IHGEGIIHRDIKTENVLV 293
|
Length = 461 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 7e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF ++L A+ YLHS GI HR + P N+LL
Sbjct: 104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDK 137
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-05
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+++ +YQ+L + Y+HS G+ HR + PSN+L+ ++C L ICD
Sbjct: 110 IQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-05
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 1485 SGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
SG ++ + + H G VT +A +P+ L S S D T+++WD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 3e-05
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
H+++ +YQ+L + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 107 HIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC--DLKICD 149
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 3e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 121 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 4e-05
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 161 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVP + E+S+ L+H N+ + ++ T +T V L + P L +
Sbjct: 45 GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHP-Y 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 272
+VR M+QLL +AY+H I HR + P N+L+ S L + D L SI
Sbjct: 104 NVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI--SYLGELKLADFGLARAKSI 155
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+R Q+L +AYLHS GI HR + +N+L+
Sbjct: 103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG 138
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRH N+ ++ + + + V +T+ + L+ PN L VR ++Q+L I +
Sbjct: 57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDES-RVRKYLFQILRGIEF 115
Query: 234 LHSLGIAHRSVCPSNVLLTDS 254
HS I HR + P N+L++ S
Sbjct: 116 CHSHNIIHRDIKPENILVSQS 136
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 7e-05
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 174 LRHPNVAPVLGLL-----KTSGLITSVIPKTPYT-------LENILQFSPNALKSEWHVR 221
L+HPNV P++ + K+ SV TPY LEN P+ +E ++
Sbjct: 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-----PSVKLTESQIK 118
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
M QLL I YLH I HR + +N+L+ +
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDN 150
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 7e-05
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL--VGFN 270
H +F +YQLL A+ Y+H+ + HR + P N+L C L ICD L V FN
Sbjct: 104 HHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVAFN 155
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 9e-05
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 683 DIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACITKDWT 739
DI+S+GCL+ EL P F + + LA ++ G + S ++++ + D
Sbjct: 192 DIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPD 251
Query: 740 RRPSAKSLLESPY 752
+RPS + LL+ P
Sbjct: 252 KRPSTEELLQLPL 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 145 EGKASGQESKNFLRLIGVP-----SFDES-SVPGCLRHPNVAPVLGLLKTSGLITSVIPK 198
+ GQE L+++G +F E+ S+ L H ++ + G+ I V
Sbjct: 23 DIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM-VEEY 81
Query: 199 TPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ L+ L N + W + + QL SA+ YL + H +VC N+L+
Sbjct: 82 VKFGPLDVFLHREKNNVSLHWKL-DVAKQLASALHYLEDKKLVHGNVCGKNILVA 135
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 174 LRHPNVAPVLG--LLKTSGLITSVIPKTPYTLENILQF---------SPNALKSEWHVRF 222
L+H NV ++ L + + + L I++F P+ +KS
Sbjct: 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKS------ 112
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
L++Q+L+ + YLHS + HR + P+N+L+
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVM 142
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 1e-04
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 665 LWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLENGDLPGVMEELP 723
+WR+K YSK D+FS+G LL E L L+RP FD ++ + + L G + LP
Sbjct: 216 IWRRKP-YSK------KADMFSLGVLLYELLTLKRP-FDGENMEEVM-HKTLAGRYDPLP 266
Query: 724 SHT----RILVEACITKDWTRRPSAKSLLESP 751
+ +V A ++ D RRPS+ LL P
Sbjct: 267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 1e-04
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1486 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
G ++ + + H G VT +A +P+ +LL S S D T+R+WD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
SE H R MYQLL + Y+HS + HR + P+NV +
Sbjct: 112 SEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 683 DIFSIGCLLAEL-HLRRPLFDS---ISLAVYLENGDLPGVMEELPSHT----RILVEACI 734
DI+S+GC+L EL L+ P F+ + LA+ + G P +PS R LV + +
Sbjct: 185 DIWSLGCVLYELCTLKHP-FEGENLLELALKILKGQYP----PIPSQYSSELRNLVSSLL 239
Query: 735 TKDWTRRPSAKSLLESPYF 753
KD RPS +L+SP+
Sbjct: 240 QKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
++ H + +YQ+L + Y+HS + HR + P N+L+ C L ICD
Sbjct: 103 TDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--ELKICD 148
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-04
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
SE ++FL+YQ+L + Y+H+ GI HR + P N+ + + C
Sbjct: 116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
SE V+F + +++ A+ YLHS GI HR + P N+LL
Sbjct: 98 SEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-04
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 32/103 (31%)
Query: 683 DIFSIGCLLAELHLRRPLF------DSISLAVYL----------ENGDLPGVMEEL--PS 724
DI+ IGC+ AE+ RRP+ D + L L LPG +
Sbjct: 209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTN 268
Query: 725 HTRILVE--------------ACITKDWTRRPSAKSLLESPYF 753
+ R L E ++ D +R +A LE PYF
Sbjct: 269 YPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 3e-04
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L+HPN+ ++ + + + V +T+ N L+ +P + E ++ +++Q L A+ +
Sbjct: 57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGV-PEHLIKKIIWQTLQAVNF 115
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
H HR V P N+L+T + +CD
Sbjct: 116 CHKHNCIHRDVKPENILITKQ--GQIKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 4e-04
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 121
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-04
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ ++H N+ + ++ + + V L+ + SP+ K+
Sbjct: 43 GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPR 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ +YQ+L IAY HS + HR + P N+L+
Sbjct: 103 LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI 135
|
Length = 294 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
E V+ MYQLL ++ ++H GI HR + P N+L+ D
Sbjct: 98 PEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI 137
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-04
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
QLL +AYLHS GI HR + P+N+ L +
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHN 135
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 4e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS-LAVYLENGDLPGVMEELPSH---TRI-LVEACITKD 737
DI+SIGC + E+ +P S+ LA G G+M LP I V +C+T+D
Sbjct: 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRD 249
Query: 738 WTRRPSAKSLLESPY 752
RPSA LL +
Sbjct: 250 QHERPSALQLLRHDF 264
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 4e-04
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE +R ++YQ+L +A++H G HR + P N+L++
Sbjct: 97 SESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 5e-04
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 161 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G P + E+S+ L+H N+ + ++ T +T V L + P L E
Sbjct: 45 GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPE- 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+V+ ++QLL ++Y+H I HR + P N+L++D+
Sbjct: 104 NVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT 139
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
SE V++L+YQ+L + Y+HS GI HR + P N+ + + C
Sbjct: 115 SEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC 154
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 7e-04
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
++ LM QLL + +LHS I HR + P N+L+T
Sbjct: 105 PPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 8e-04
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACIT 735
D DI+S+GC+L E+ F+ +S+ + + G P + E ++++ +
Sbjct: 183 DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLN 242
Query: 736 KDWTRRPSAKSLLESPY 752
KD + RPSA +L +P+
Sbjct: 243 KDPSLRPSAAEILRNPF 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 8e-04
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLE-----NILQFSPNALKSEWHVRFLMYQLL 228
L+HPN+ +L + I V LE + +P +KS M L
Sbjct: 59 LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKS------YMLMTL 112
Query: 229 SAIAYLHSLGIAHRSVCPSNVLLTD 253
+ YLHS I HR + P+N+L+
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIAS 137
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 38/105 (36%)
Query: 683 DIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENGDLPG 717
D++S+GC+ AEL LR P SL Y+E P
Sbjct: 185 DMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP 244
Query: 718 VMEELPSHTRI---------LVEACITKDWTRRPSAKSLLESPYF 753
P L++ +T + +R +A+ LE PYF
Sbjct: 245 ----TPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 0.001
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
++H N+ ++ + I V+ L+ + +E V+ ++ Q+L+ +
Sbjct: 77 IKHENIMGLVDVYVEGDFINLVMDIMASDLKKV--VDRKIRLTESQVKCILLQILNGLNV 134
Query: 234 LHSLGIAHRSVCPSNVLLTD 253
LH HR + P+N+ +
Sbjct: 135 LHKWYFMHRDLSPANIFINS 154
|
Length = 335 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E S+ L+H N+ + ++ T +T V L+ L N L S +V+ M+Q
Sbjct: 53 EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGN-LMSMHNVKIFMFQ 111
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTD 253
LL ++Y H I HR + P N+L+ +
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLINE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
E R + +++ A+ YLHS GI HR + P N+L+ +
Sbjct: 92 EDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN 129
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 0.001
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTS-GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLM 224
E+++ L HPN+ +L + GL+ +V P TL +L + AL + R LM
Sbjct: 28 ETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLA-ADGALPAGETGR-LM 85
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
Q+L A+A H+ GI HR + P N++++ +
Sbjct: 86 LQVLDALACAHNQGIVHRDLKPQNIMVSQT 115
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 683 DIFSIGCLLAELHLRR-PLFDS-----ISLAVYLENGDLPGVMEELPS-HTRILVEACIT 735
DI+S+G L E L + P L + +G P + E S R + AC+
Sbjct: 182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQ 241
Query: 736 KDWTRRPSAKSLLESP 751
KD +RPSA LL+ P
Sbjct: 242 KDPKKRPSAAELLQHP 257
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 174 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
LRHPN+ + ++ L I V+ L ++L P SE V+ LM QLL +
Sbjct: 63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPF-SESQVKCLMLQLLRGL 121
Query: 232 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
YLH I HR + SN+LLTD L I D
Sbjct: 122 QYLHENFIIHRDLKVSNLLLTDK--GCLKIAD 151
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.002
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 29/100 (29%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLA---------------------VYL--------ENG 713
D++S+GC+ AEL RRPLF S A V L
Sbjct: 188 DMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247
Query: 714 DLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ E+ L++ +T + +R SA L+ PYF
Sbjct: 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ L+H N+ + ++ T +T V L+ + L +VR ++Q
Sbjct: 53 EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMH-NVRLFLFQ 111
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTD 253
LL +AY H + HR + P N+L+++
Sbjct: 112 LLRGLAYCHQRRVLHRDLKPQNLLISE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 166 DESSVPGCLRHPNVAPVLG-LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
+E + L+HPN+ + + L+ + TL + + L E V + +
Sbjct: 48 NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL 107
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+Q++SA++Y+H GI HR + N+ LT
Sbjct: 108 FQIVSAVSYIHKAGILHRDIKTLNIFLT 135
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.003
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ + + V L+ + SP
Sbjct: 40 GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPP 99
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ +YQLL IAY HS + HR + P N+L+
Sbjct: 100 LIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI 132
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 21/89 (23%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNA-----LK-----SEWHVRFL 223
L+HPN+ +G ++TS +L IL+++ N +K E V
Sbjct: 56 LKHPNIVKYIGSIETSD-----------SLYIILEYAENGSLRQIIKKFGPFPESLVAVY 104
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+YQ+L +AYLH G+ HR + +N+L T
Sbjct: 105 VYQVLQGLAYLHEQGVIHRDIKAANILTT 133
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 44/126 (34%)
Query: 662 ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLF-------------------- 701
E+LL + +SYS DI+++GC++AEL+ RPLF
Sbjct: 168 EILL--RSTSYS------SPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219
Query: 702 -----DSISLAVYLENGDLPGVMEELPSHTRI---------LVEACITKDWTRRPSAKSL 747
+ LA L P H I L++ + D +RP+A
Sbjct: 220 KQDWPEGYKLASKL-GFRFP-QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277
Query: 748 LESPYF 753
L+ PYF
Sbjct: 278 LQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 33/106 (31%)
Query: 680 CSKDIFSIGCLLAELHLRRPLF--DS-------ISLAVYLENGDL-PGVMEELPSHTRI- 728
DI+SIG + AE+ ++PLF DS I + D+ PGV LP +
Sbjct: 181 TPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV-TSLPDYKNTF 239
Query: 729 ---------------------LVEACITKDWTRRPSAKSLLESPYF 753
L+E + D +R SAK L PYF
Sbjct: 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.004
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 154 KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQ--FS 210
K FLR E+ + L HP + PV + + +P YTL+++L+ +
Sbjct: 47 KRFLR--------EAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQ 98
Query: 211 PNALKSEWHVR-----FL--MYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L E + FL +++ + I Y+HS G+ HR + P N+LL
Sbjct: 99 KESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146
|
Length = 932 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.004
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
LQ P SE RF ++L A+ YLH LGI +R + P N+LL +S
Sbjct: 92 LQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES 139
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
++ MYQLL +A+ H G+ HR + P N+L+
Sbjct: 112 IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
AS +E + FL E+S+ L HPN+ +LG+ ++T +P L
Sbjct: 39 GASEEEREEFLE--------EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGD--L 88
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ L+ L + ++ Q+ + YL S HR + N L+T++
Sbjct: 89 LDFLRKHGEKLTLKDLLQM-ALQIAKGMEYLESKNFVHRDLAARNCLVTEN 138
|
Length = 258 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1620 | |||
| cd06071 | 275 | Beach BEACH (Beige and Chediak-Higashi) domains, i | 100.0 | |
| KOG4190 | 1034 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF02138 | 270 | Beach: Beige/BEACH domain; InterPro: IPR000409 The | 100.0 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG1787 | 1126 | consensus Kinase A-anchor protein Neurobeachin and | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 100.0 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 100.0 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.98 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.98 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.98 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.98 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.98 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.98 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.97 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG1786 | 1081 | consensus Lysosomal trafficking regulator LYST and | 99.97 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.97 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.97 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.96 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.96 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.96 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.96 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.96 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.96 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.96 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.95 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.95 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.95 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.95 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.95 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.95 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.95 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.95 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.95 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.94 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.94 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.94 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.94 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.94 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.94 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.94 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.94 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.94 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.94 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.94 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.94 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.94 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.94 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.94 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.94 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.93 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.93 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.93 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.93 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.93 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.93 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.93 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.93 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.93 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.93 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.93 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.93 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.93 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.93 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.93 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.93 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.92 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.92 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.92 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.92 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.92 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.92 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.92 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.92 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.92 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.92 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.92 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.92 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.92 | |
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.91 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.91 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.91 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.91 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.91 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.91 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.91 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.91 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.91 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.91 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.91 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.91 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.91 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.91 | |
| PTZ00421 | 493 | coronin; Provisional | 99.91 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.91 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.91 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.91 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.91 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.91 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.9 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.9 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.9 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.9 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.9 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.9 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.9 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.9 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.9 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.9 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.9 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.9 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.9 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.9 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.9 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.9 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.9 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.9 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.9 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.9 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.9 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.9 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.9 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.9 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.9 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.9 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.9 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.9 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.9 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.9 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.9 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.9 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.9 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.9 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.89 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.89 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.89 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.89 | |
| PTZ00420 | 568 | coronin; Provisional | 99.89 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.89 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.89 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| PTZ00421 | 493 | coronin; Provisional | 99.89 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.89 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.89 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.89 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.89 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.89 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.89 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.89 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.89 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.89 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.89 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.89 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.89 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.89 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.89 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG1063 | 764 | consensus RNA polymerase II elongator complex, sub | 99.89 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.89 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.88 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 99.88 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.88 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.88 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.88 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.88 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.88 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.87 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.87 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.87 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.87 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.87 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.87 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.87 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 99.87 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.86 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.86 | |
| KOG0650 | 733 | consensus WD40 repeat nucleolar protein Bop1, invo | 99.86 |
| >cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-67 Score=591.55 Aligned_cols=233 Identities=40% Similarity=0.677 Sum_probs=205.8
Q ss_pred cccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCC-CCCCCCCCCCCCCccHHhhhccccccc-cc----
Q 000355 312 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLD-FT---- 384 (1620)
Q Consensus 312 ~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdlsk~~~~~~~~~~~~~-~~---- 384 (1620)
+++|..|+||||||||.||.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++++.+.. .+
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 468999999999999999999999999999999999999 88776 488999999999999999998776542 22
Q ss_pred ccCCCCCCccCccccccceeeecccccCchHHHHHHhhccc-C-CCCccchHHHhh----c--CCCCccccCcccCCccc
Q 000355 385 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY-E-PNEYPSTMQRLY----Q--WTPDECIPEFYCDPQIF 456 (1620)
Q Consensus 385 ~~~~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~~-~-~~~~~~~~~~~~----~--~~~~eliPef~~~p~~~ 456 (1620)
....+.|+||+++|+++++|++||+|++|||.+++.+++++ + +++.+.++...+ . ++++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23457899999999999999999999999999999988763 3 466666665544 3 78999999999999999
Q ss_pred ccCCC---------CCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCC
Q 000355 457 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 527 (1620)
Q Consensus 457 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~~~~ 527 (1620)
+|.+. .++||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999886531
Q ss_pred ----------------cccCC--cccccCCCCCCC
Q 000355 528 ----------------PKSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 528 ----------------~~~~g--~~qlf~~pHp~r 544 (1620)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 23456 899999999998
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. |
| >KOG4190 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=582.54 Aligned_cols=714 Identities=22% Similarity=0.327 Sum_probs=513.0
Q ss_pred cccccccCcCChhhHHH--HHHHHHHHHHhcChHHHHHhhHHHHHHhhccCC--------------------------C-
Q 000355 803 YCLPLVATPLSDAEAEC--AYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG--------------------------Y- 853 (1620)
Q Consensus 803 ~~l~~~~~~~~~~~~~~--~~~l~~~~~~~l~~~~t~~~ll~~~~~l~~~~~--------------------------~- 853 (1620)
..+||+++++.++++.+ ||.||+|+++++|...||++|+.++.|+|+.++ +
T Consensus 8 lL~PHi~dl~~De~~~il~a~~lfdpIa~algvsqtqqhL~~~L~kl~dvesv~~Pddggsngstd~~~~l~Fsasssfk 87 (1034)
T KOG4190|consen 8 LLAPHIADLFDDEDHIILCAQLLFDPIAAALGVSQTQQHLFDFLFKLEDVESVDFPDDGGSNGSTDCDEFLFFSASSSFK 87 (1034)
T ss_pred HhhhhHHhhccChhHHHHHHHHhcchhHHHhcccHHHHHHHHHHhhhhccccccCCcccCcCCCcCCCceeEEeeccccc
Confidence 56788999999998887 999999999999999999999999999998422 3
Q ss_pred CccEEEeehhhHHHHHHHHHhHHHHhhh-ccccee------------ehhcc------------------------CC--
Q 000355 854 SHLKVSLLQDSFVREIWNRIGKQAYLEM-VHPLVI------------SNLYA------------------------AP-- 894 (1620)
Q Consensus 854 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~~~~------------~~~~~------------------------~~-- 894 (1620)
+++.||||||+||++||||||++|||+| |.||++ +++|| +|
T Consensus 88 srksvklyhhsfllrliVRfgi~cfihhFiapliEa~Ggykepeqgngyhyhsggsrrtsknl~~aSe~elhk~dVaPe~ 167 (1034)
T KOG4190|consen 88 SRKSVKLYHHSFLLRLIVRFGIPCFIHHFIAPLIEAFGGYKEPEQGNGYHYHSGGSRRTSKNLKCASEHELHKLDVAPEF 167 (1034)
T ss_pred cccchhhhhhhhhhhheeeecCchhhhhhhhHHHHHhcCcCCcccCCccccccCcccccccccccchHhHhhhhccCCCc
Confidence 6889999999999999999999999999 999999 45555 22
Q ss_pred ---------------CC------Chhhhh--------------------hhhhc-----c--c-----------------
Q 000355 895 ---------------HK------SSASAA--------------------SVLLI-----G--S----------------- 909 (1620)
Q Consensus 895 ---------------~~------~~~~~~--------------------~~~~~-----~--~----------------- 909 (1620)
++ .+++++ ....| | .
T Consensus 168 k~dieeif~fEddhdkaS~qd~~~id~~dm~~~~~aa~aEEA~e~dg~pdklVIneliygarispdklSLkeS~~~~ai~ 247 (1034)
T KOG4190|consen 168 KKDIEEIFLFEDDHDKASIQDCDHIDQCDMAAFQQAAEAEEACEQDGHPDKLVINELIYGARISPDKLSLKESALEDAIN 247 (1034)
T ss_pred CcchhhheeeccccchhhhhhchhHHHHhhHHHHhhhhhHHHHhhcCCCcchhhhhhhhccccCccccccchhhCccccc
Confidence 01 112221 00011 0 0
Q ss_pred -------ccccCCC--ee------------------Eeeeh--------------------------------hh-----
Q 000355 910 -------SEELGVP--IT------------------VHQTI--------------------------------LP----- 925 (1620)
Q Consensus 910 -------~~~~~~~--~~------------------~~~~~--------------------------------~~----- 925 (1620)
||.|.|| .| .|+.+ .|
T Consensus 248 pppigprsP~IEi~m~~TaggirrsfqlsaidcdigsrksVd~fDli~~a~eqi~p~aee~eaeasdslqasvi~~isEA 327 (1034)
T KOG4190|consen 248 PPPIGPRSPMIEIIMCETAGGIRRSFQLSAIDCDIGSRKSVDLFDLIFLAHEQICPGAEEFEAEASDSLQASVIPPISEA 327 (1034)
T ss_pred CCCCCCCCCeeEeeecccccccccccccccccccccccccchHHHHHHHhhhccCCchhhHHHHhhhhcccccCCcHHHH
Confidence 1122222 01 01001 00
Q ss_pred ------------------hhhhccC---------------CCCCCc----------------------------------
Q 000355 926 ------------------LIQCFGR---------------GICPDG---------------------------------- 938 (1620)
Q Consensus 926 ------------------l~~~~~~---------------~~~~~~---------------------------------- 938 (1620)
|.||+|| .+||.|
T Consensus 328 ~A~~N~~iSemaaESi~WLahRlGPVi~akFIsrNlLkilalCY~~~E~l~~E~ddggssfnsspdaanl~~Fnia~a~v 407 (1034)
T KOG4190|consen 328 CASMNCDISEMAAESIMWLAHRLGPVICAKFISRNLLKILALCYEAFEMLGLEQDDGGSSFNSSPDAANLAVFNIALAGV 407 (1034)
T ss_pred HhhhcCcHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHhCcccCCCCccccCCcchhhhhhhhhhhhcc
Confidence 6899999 256654
Q ss_pred ---------chhhhhhhhcccchhhHHhHhhhhHHHhhcccccCCCCCCCCcccchhHHHHHHHhhhcccccccchHHHH
Q 000355 939 ---------IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVV 1009 (1620)
Q Consensus 939 ---------~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1620)
.|||+.||++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+|
T Consensus 408 vgD~saaRi~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM 479 (1034)
T KOG4190|consen 408 VGDESAARIEECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM 479 (1034)
T ss_pred ccchhHHHHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH
Confidence 89999999999999999999999999999999 4888855 999999999999999999999999
Q ss_pred HHHhhhhhh-----HHHHHhhccCcchhHHHHHHHH--------HHHHHHHhChhhHHHhhh-HHHHHHHhHhhcccccc
Q 000355 1010 KELIEDRSC-----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECS 1075 (1620)
Q Consensus 1010 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~~~~~f~~~~~~~~~~ 1075 (1620)
|.||++++ |...+|++||+.||++++..+. |++|++|||.||||+|.+ |.|.+|| +.|+++++
T Consensus 480 -ehlqhimldaillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ 556 (1034)
T KOG4190|consen 480 -EHLQHIMLDAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFE 556 (1034)
T ss_pred -HHHHHHhhhhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcC
Confidence 88888766 4445599999999999887754 899999999999999999 9999999 99998777
Q ss_pred cCCCCC---CCCcccCCCC-CCCccchhchh----hhHHHHhHHHHHhhhhHHHHHHhhhHHHHHHHHHHHcCCcccccc
Q 000355 1076 DESGSL---GGSLKVPKPK-VDGESQIESRM----DLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTG 1147 (1620)
Q Consensus 1076 ~~~~~~---~~~~~~~~~~-~~~~~~~~~~~----~~~~~~y~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1147 (1620)
..+..- -.++..-.|. +.|.+..|.|. +++...|..|++.+|...|.+.|.+-.++ +..||+.+++...
T Consensus 557 ip~tD~acdlanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq 633 (1034)
T KOG4190|consen 557 IPETDEACDLANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQ 633 (1034)
T ss_pred CCCcchhhhhcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCC
Confidence 544111 1122222333 44667777664 88999999999999999999999999998 8999988874311
Q ss_pred CCccccccccccCccccCCCCccccCccch-hcccccccccccccccc-----cCCCcccccccccccchhhhhhccccc
Q 000355 1148 ESSRISEENISAKRPLLNKGSTSQCNPAKL-LLNGVGWSIPQSQGSRS-----SKNLIPQRRVYDYHKSSVERQEATSNL 1221 (1620)
Q Consensus 1148 ~~~~~~~~~~da~r~~~~~~~~~~~~p~q~-y~s~l~~~~~~s~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~l 1221 (1620)
+.. .-|..+-....+..-.+.-.. ..+.+|- +..+.|. ....+.+..++.+.|.|..+|.....+
T Consensus 634 ~k~------qiA~n~~sgqdvdsvdasce~faAnSfG~---~i~GNRL~~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l 704 (1034)
T KOG4190|consen 634 PKA------QIAHNPPSGQDVDSVDASCEAFAANSFGG---MISGNRLFSARANSELISDMSAGGLDQMPFCDHLKGNLL 704 (1034)
T ss_pred CCc------ccccCCCCccccccccchhhhhhhhcccc---eeecceeeeeccCCccchhhhhcCccccccccccccchH
Confidence 111 111111111111111000001 1111221 1122222 223345666677788887777554222
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEE
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1299 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrL 1299 (1620)
.||+ .+.+ .+...-++++...+..+.||++.|+.++--.+++.++|+|. |+||++
T Consensus 705 -----A~W~~ets~~--------------e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKL 761 (1034)
T KOG4190|consen 705 -----AVWCAETSAA--------------ECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKL 761 (1034)
T ss_pred -----HHHHhhhhHh--------------hcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEE
Confidence 2333 1111 11122244455578889999999999999999999999998 999999
Q ss_pred EeCC-------CCeEEEEEecCCcceeEEEEeeCCCeEEEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1300 WELT-------RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1300 Wdl~-------tg~~l~~l~gH~~~V~sV~f~~~~~~laS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
|+++ |..|..+++.|+.+|+++.|..+.+.++||||.|++||.--|+.+.........
T Consensus 762 WSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~--------------- 826 (1034)
T KOG4190|consen 762 WSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE--------------- 826 (1034)
T ss_pred EEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc---------------
Confidence 9974 456899999999999999999999999999999999999888776533211100
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE-EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV-GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1451 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las-gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1451 (1620)
.-.+.| .|+.- -+...+++ ++...+|+++|.+.++.+..|+..... +-...+++++.
T Consensus 827 ----------~a~~~i----------kcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaV 884 (1034)
T KOG4190|consen 827 ----------GAGGNI----------KCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAV 884 (1034)
T ss_pred ----------CCCcee----------Eeccc-CcchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEe
Confidence 000111 11110 02234444 477899999999999999888865433 23456777776
Q ss_pred eCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEE-EECCCCCCC
Q 000355 1452 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRI-WDLRRNWPS 1530 (1620)
Q Consensus 1452 ~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~I-WDl~~~~~~ 1530 (1620)
. +.|+++|+|-++|+|.+.|.|+|+.+..|+........++.|.++.|++...|.++.+ |...++ .
T Consensus 885 a-----------~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg--i 951 (1034)
T KOG4190|consen 885 A-----------DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG--I 951 (1034)
T ss_pred c-----------cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC--e
Confidence 4 6789999999999999999999999999998888888888888899999999999999 988776 2
Q ss_pred CCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEE
Q 000355 1531 QPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLV 1609 (1620)
Q Consensus 1531 ~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLas 1609 (1620)
.....+....+..-+..-|.-|+++.... ++||.=.. . .......+|+.. ....++.++++..|.+..++.
T Consensus 952 mh~q~kpppepahflqsvgpSLV~a~~Gn~lgVYad~a--~--~ha~stitKiR~----d~f~G~lTala~LPLN~afLa 1023 (1034)
T KOG4190|consen 952 MHLQDKPPPEPAHFLQSVGPSLVTAQNGNILGVYADSA--E--LHAESTITKIRP----DEFPGTLTALAPLPLNCAFLA 1023 (1034)
T ss_pred eeeccCCCCcchhhhhccCceeEEeccCcEEEEEecch--h--hhhhhhhccccc----cccCCccceeeeccccchhhc
Confidence 22344444444444555677888887666 89986221 1 111112334432 246788999999999999999
Q ss_pred EeCCCcEEEcC
Q 000355 1610 GTEDGYLRLCC 1620 (1620)
Q Consensus 1610 gs~DG~IrlWd 1620 (1620)
|.+.|.|++.|
T Consensus 1024 Gne~G~IaLlC 1034 (1034)
T KOG4190|consen 1024 GNEHGAIALLC 1034 (1034)
T ss_pred cCCCCceeecC
Confidence 99999999977
|
|
| >PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-65 Score=578.32 Aligned_cols=233 Identities=40% Similarity=0.674 Sum_probs=160.3
Q ss_pred cccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCC-CCCCCCCCCCCCCccHHhhhcccc-ccccccc--
Q 000355 312 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDE-QLDFTYS-- 386 (1620)
Q Consensus 312 ~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdlsk~~~~~~~~~~-~~~~~~~-- 386 (1620)
+++|..|+||||||||.+|.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++... ++..+|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 99765 588999999999999998876432 2333332
Q ss_pred -CCCCCCccCccccccceeeecccccCchHHHHHHhhcc-c-CCCCccchHHHhhcC------CCCccccCcccCCcccc
Q 000355 387 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV-Y-EPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 457 (1620)
Q Consensus 387 -~~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~-~-~~~~~~~~~~~~~~~------~~~eliPef~~~p~~~~ 457 (1620)
..+.|+||+++|+++++|++||+|++|||.+++.++++ | .+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 23478999999999999999999999999999999986 3 588999999988864 56999999999999999
Q ss_pred cCCC-------CCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCCc--
Q 000355 458 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 528 (1620)
Q Consensus 458 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~~~~~-- 528 (1620)
|.+. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999887644
Q ss_pred ------------ccCC--cccccCCCCCCC
Q 000355 529 ------------KSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 529 ------------~~~g--~~qlf~~pHp~r 544 (1620)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4578 789999999998
|
The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-47 Score=505.21 Aligned_cols=293 Identities=19% Similarity=0.237 Sum_probs=225.0
Q ss_pred eecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC----e----EEEEEecCCcceeEEEEeeC-CCeEEEe--
Q 000355 1265 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI----N----CVSGYYGHEEVVNDICVLSS-SGRIASC-- 1333 (1620)
Q Consensus 1265 l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg----~----~l~~l~gH~~~V~sV~f~~~-~~~laS~-- 1333 (1620)
+.+|.+.|.+++|+++|+++||||. |++|+|||..+. . ....+. +...|.+++|++. +..++++
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~----D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGV----NKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 4569999999999999999999997 899999997542 1 223343 4568999999875 4566444
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEec-CCCEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVV 1412 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~-dg~~las 1412 (1620)
||+|++||+.+++.+..+.+|. +. |+++++++ ++..+++
T Consensus 554 Dg~v~lWd~~~~~~~~~~~~H~------------------------------~~----------V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 554 EGVVQVWDVARSQLVTEMKEHE------------------------------KR----------VWSIDYSSADPTLLAS 593 (793)
T ss_pred CCeEEEEECCCCeEEEEecCCC------------------------------CC----------EEEEEEcCCCCCEEEE
Confidence 9999999999998887776542 23 45555554 6889999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-EEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VIAS 1491 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-~i~~ 1491 (1620)
|+.||+|++||++++..+..+..+ ..|.+++|.+ ++|.++++|+.||.|++||+++++ .+..
T Consensus 594 gs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~----------~~g~~latgs~dg~I~iwD~~~~~~~~~~ 656 (793)
T PLN00181 594 GSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPS----------ESGRSLAFGSADHKVYYYDLRNPKLPLCT 656 (793)
T ss_pred EcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeC----------CCCCEEEEEeCCCeEEEEECCCCCccceE
Confidence 999999999999999988887643 2367777642 456899999999999999999876 5778
Q ss_pred EEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCC----CCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEe
Q 000355 1492 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW----PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1492 l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~----~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+.+|...|+++...++.+|+|||.|++|++||++.+. ...+.++.+|...+. +|++++++|++|+.|+ |.+|+
T Consensus 657 ~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 657 MIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred ecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 8899999999995578899999999999999997531 245678999998876 4999999999999999 99999
Q ss_pred ccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1565 LSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1565 l~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
........ .................+...|++++|+|++..|++|+.||.|+||+
T Consensus 737 ~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 737 KAFPMPVL-SYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred CCCCCceE-EEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 65211000 00000000000000123567899999999999999999999999996
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=419.63 Aligned_cols=149 Identities=23% Similarity=0.302 Sum_probs=135.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|..+++||+|+||.||+|++ .++|+.||||+++..+..+. +.+.++|||+.|++++||||+.|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d------~~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARD------TETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEe------cCCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 5799999999999999999997 35789999999988644332 233456999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
|+|...+.+.||+|||+.||+.+|+. +...++..+++.|+.|+++||+|||+++|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 99999999999999999999999984 577899999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000355 264 KPLVGF 269 (1620)
Q Consensus 264 FGla~~ 269 (1620)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999993
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=414.87 Aligned_cols=330 Identities=17% Similarity=0.284 Sum_probs=282.7
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
.++..||.+.|.+ |||+|.. |+|||+|.++|+||+. .....+.+||...|.||+|+|||+.||||+. |
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----d 178 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----D 178 (480)
T ss_pred ccccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----C
Confidence 5678899999987 9999997 9999999999999998 6789999999999999999999999999998 8
Q ss_pred cEEEEEeCCCCeEE-EEEecCCcceeEEEEee-----CCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1295 GTVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l-~~l~gH~~~V~sV~f~~-----~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
|+|++||.++|+++ ..++||++.|++++|.| ..+++||+ ||+|+|||+..|+++..+.+|..
T Consensus 179 g~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~---------- 248 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA---------- 248 (480)
T ss_pred CeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCcc----------
Confidence 99999999999876 57999999999999965 45667655 99999999999999999987642
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCcc
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V 1446 (1620)
. |+|+.+-- ..++++||.|++|++|+...|.+.+.+++|. .+|
T Consensus 249 --------------------~----------VTCvrwGG-~gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwv 291 (480)
T KOG0271|consen 249 --------------------S----------VTCVRWGG-EGLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWV 291 (480)
T ss_pred --------------------c----------eEEEEEcC-CceEEecCCCceEEEEEccchhHHHhhcccc------hhe
Confidence 2 45555543 3589999999999999999999999999765 457
Q ss_pred ceEeeeCCCccccCcccC-------------------------CCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEE
Q 000355 1447 SAICACGSEKMQAGGAVA-------------------------SPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVT 1500 (1620)
Q Consensus 1447 ~sva~~~~~~~~~~g~~p-------------------------~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~ 1500 (1620)
+.++.+....+....+.+ .|..+++|++|+++.+|+.... +++..+.||..-|+
T Consensus 292 N~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn 371 (480)
T KOG0271|consen 292 NHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVN 371 (480)
T ss_pred eeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhee
Confidence 777776333222222222 3456999999999999998754 58889999999999
Q ss_pred EEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCCcce
Q 000355 1501 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1576 (1620)
Q Consensus 1501 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1576 (1620)
.|. +||++++||+|.|++|++||.++| +.+.+|+||-..|. +||.|.++|+|||.|. ++||++..
T Consensus 372 ~V~fSPd~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~t--------- 440 (480)
T KOG0271|consen 372 HVSFSPDGRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRT--------- 440 (480)
T ss_pred eEEECCCccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeee---------
Confidence 999 999999999999999999999999 78889999999999 5999999999999999 99999862
Q ss_pred eeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1577 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1577 ~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.++..-. .+|...|.++.|+|||..+++|+.|..+++|
T Consensus 441 ---kKl~~DL--pGh~DEVf~vDwspDG~rV~sggkdkv~~lw 478 (480)
T KOG0271|consen 441 ---KKLKQDL--PGHADEVFAVDWSPDGQRVASGGKDKVLRLW 478 (480)
T ss_pred ---eeecccC--CCCCceEEEEEecCCCceeecCCCceEEEee
Confidence 1222111 1588999999999999999999999999999
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=405.56 Aligned_cols=157 Identities=23% Similarity=0.198 Sum_probs=138.9
Q ss_pred ccccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc
Q 000355 97 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 176 (1620)
Q Consensus 97 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H 176 (1620)
+...+.++.|+.+++|++|+||+||+|++. .++++||+|+++..+... .+.+.++|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek~--------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEKE--------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeecccccccC--------CCcchhHHHHHHHHhcCC
Confidence 345567889999999999999999999973 467999999998865321 245567899999999999
Q ss_pred ccccceeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 177 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 177 pNIv~l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
||||.+.++.... +.+|||||||+.||..++... ...+...+++.++.|+++||+|||.++|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999998755 489999999999999999853 4678999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccC
Q 000355 255 CWSWLYICDKPLVGFN 270 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~ 270 (1620)
| .+||+|||+||..
T Consensus 214 G--~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 214 G--ILKIADFGLAREY 227 (419)
T ss_pred C--cEEecccchhhhh
Confidence 9 8999999999943
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-45 Score=421.90 Aligned_cols=179 Identities=23% Similarity=0.258 Sum_probs=148.9
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
..+..+.|+.+++||+|+||.||+|++ ..+|++||+|++........ ... .++|||.||++|+|||
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~------~~tgkivALKKvr~d~~~~~-~~~-------t~~REI~ILr~l~HpN 177 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARD------LETGKIVALKKVRFDNEKEG-FPI-------TAIREIKILRRLDHPN 177 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeee------cccCcEEEEEEeecccCCCc-chH-------HHHHHHHHHHhcCCCc
Confidence 345567899999999999999999997 46899999999987643332 222 2359999999999999
Q ss_pred ccceeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 179 VAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 179 Iv~l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
||+|.+..... ..+|||+|||+.||.-++. ++...|++.+++.||+||+.||+|||++||+|||||.+|||||.+|
T Consensus 178 IikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G- 255 (560)
T KOG0600|consen 178 IIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG- 255 (560)
T ss_pred ccceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-
Confidence 99999998877 6899999999999999997 4677899999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
.+||+|||||+........ . .+.++-|.+|+|||++.
T Consensus 256 -~LKiaDFGLAr~y~~~~~~--~--------~T~rVvTLWYRpPELLL 292 (560)
T KOG0600|consen 256 -VLKIADFGLARFYTPSGSA--P--------YTSRVVTLWYRPPELLL 292 (560)
T ss_pred -CEEeccccceeeccCCCCc--c--------cccceEEeeccChHHhc
Confidence 8999999999954322111 0 23344677777777653
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=400.19 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=133.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
|++|+.+.++|+|+||+||||++ ..+|++||||++....... ..++. ++|||++|+.|+|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrn------k~TgqIVAIKkF~Esedd~-~VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRN------KDTGQIVAIKKFVESEDDP-VVKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEecc------CCcccEEEEEeeccCCccH-HHHHH-------HHHHHHHHHhcccchHHHH
Confidence 57899999999999999999996 2679999999997643332 22222 3599999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|.....++||+|||+.++.+-+...+++ +++..++.|++|++.|+.|||+++|||||||||||||+.+| .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888765554 58889999999999999999999999999999999999999 99999
Q ss_pred ecCCcccC
Q 000355 263 DKPLVGFN 270 (1620)
Q Consensus 263 DFGla~~~ 270 (1620)
|||+||..
T Consensus 144 DFGFAR~L 151 (396)
T KOG0593|consen 144 DFGFARTL 151 (396)
T ss_pred cchhhHhh
Confidence 99999943
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-45 Score=418.61 Aligned_cols=175 Identities=21% Similarity=0.228 Sum_probs=149.4
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 177 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-Hp 177 (1620)
+...+++|.++++||.|+||.||+|+. .+++..||||++++.-... .++++ +||++.|++|+ ||
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~------~~~~~~VAIK~MK~Kf~s~---ee~~n------LREvksL~kln~hp 69 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKS------KETGELVAIKKMKKKFYSW---EECMN------LREVKSLRKLNPHP 69 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeee------cCCCceeeHHHHHhhhccH---HHHHH------HHHHHHHHhcCCCC
Confidence 345688999999999999999999996 3678889999998754443 33332 49999999999 99
Q ss_pred cccceeeEEEeCC-EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~-~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
|||+|.+++.+.+ .+|+|||||+.+|+++++.. ++.+++..++.|++||++||+|+|.+|+.|||+||||||+....
T Consensus 70 niikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 70 NIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND- 147 (538)
T ss_pred cchhhHHHhhccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc-
Confidence 9999999999988 99999999999999999964 88899999999999999999999999999999999999999776
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.+||+|||+||.... .+. -+.+++|.+|+|||++
T Consensus 148 -~iKiaDFGLARev~S--------kpP----YTeYVSTRWYRAPEvL 181 (538)
T KOG0661|consen 148 -VIKIADFGLAREVRS--------KPP----YTEYVSTRWYRAPEVL 181 (538)
T ss_pred -eeEeccccccccccc--------CCC----cchhhhcccccchHHh
Confidence 799999999994321 111 1335578888888876
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=401.75 Aligned_cols=175 Identities=21% Similarity=0.325 Sum_probs=143.0
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
....|..++.||+|+||.|..|.+. .+|+.||||++...-......++ ++||+++|+.++|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~akR--------tlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAKR--------TLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHHH--------HHHHHHHHHHhcCCCcce
Confidence 3457777899999999999999872 56799999999743233333333 349999999999999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++..+ +.+|+|+|+|+.||.++|+ .+..+++.+++++++||++||+|+|+.+|+||||||.|||++.++
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 99999762 3799999999999999999 455699999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.+||||||+||..... ......+.+..|.+|+|||++
T Consensus 163 -~lKI~DFGLAR~~~~~---------~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 -DLKICDFGLARYLDKF---------FEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred -CEEeccccceeecccc---------CcccchhcceeeeeecCHHHH
Confidence 8999999999954211 111234555667777777764
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=400.21 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=147.4
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH--HHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~--~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
..+.|.+.+.||+|+||.|-+|.. ..+|+.||||++.+.+...... .... ...+|++||++|+||||
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e------~~tgk~vAiKIi~krk~~~~s~~~~~~~-----~v~~EieILkkL~HP~I 238 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYE------KKTGKQVAIKIINKRKSTGCSRAIAKTR-----DVQNEIEILKKLSHPNI 238 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEE------cccCcEEEeeeeehhhcccccccccchh-----hhHHHHHHHHhcCCCCE
Confidence 456899999999999999999986 2578999999999876654221 1111 12299999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC-ce
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC-WS 257 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~-~~ 257 (1620)
|+++++|+..+..||||||++| +|.+.+- .++.+.+..-+.+++|++.|+.|||++||+||||||+|||++.+. ..
T Consensus 239 V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 239 VRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred EEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce
Confidence 9999999999999999999994 9999998 567888999999999999999999999999999999999998762 23
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
.+||+|||+|+.... +.++....|||.|.|||++.+
T Consensus 317 llKItDFGlAK~~g~------------~sfm~TlCGTpsYvAPEVl~~ 352 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGE------------GSFMKTLCGTPSYVAPEVLAS 352 (475)
T ss_pred EEEecccchhhcccc------------ceehhhhcCCccccChhheec
Confidence 899999999995321 112222235999999999743
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=403.40 Aligned_cols=173 Identities=18% Similarity=0.236 Sum_probs=151.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|+..+.||+|+|+.||++++ ..+|+.||+|++.+........++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~------~~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD------LDTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE------cCCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 6799999999999999999996 367899999999886555555555553 999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|++.+++|||+|+|. ++|..+++ +.+.++|.++++|++||+.||.|||+++|||||||..||||+++. ++||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 99999999999999999 69999998 678899999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|||||.......++ ..+.| |||.|.|||++.
T Consensus 161 DFGLAt~le~~~Er----------k~TlC-GTPNYIAPEVl~ 191 (592)
T KOG0575|consen 161 DFGLATQLEYDGER----------KKTLC-GTPNYIAPEVLN 191 (592)
T ss_pred ccceeeeecCcccc----------cceec-CCCcccChhHhc
Confidence 99999966533221 12334 599999999973
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=367.31 Aligned_cols=290 Identities=23% Similarity=0.310 Sum_probs=253.2
Q ss_pred CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1259 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
..|-.++.||.++|.|++|+|+|+.|+|||. |.|+|+||+.|..+..+.+||...|.||+|+|++..|||+ ||+
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsG----D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~ 180 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSG----DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS 180 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCC----CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCe
Confidence 4577889999999999999999999999998 9999999999999999999999999999999999999766 999
Q ss_pred EEEEeCCCCceEE-EEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1337 LHVWNSQTGKLLS-VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1337 V~IWD~~tg~~i~-~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
|++||.++|+++. .+. .|..+|.+++|.|- ...|..+.+++++.
T Consensus 181 I~lwdpktg~~~g~~l~------------------------------gH~K~It~Lawep~-----hl~p~~r~las~sk 225 (480)
T KOG0271|consen 181 IRLWDPKTGQQIGRALR------------------------------GHKKWITALAWEPL-----HLVPPCRRLASSSK 225 (480)
T ss_pred EEEecCCCCCccccccc------------------------------CcccceeEEeeccc-----ccCCCccceecccC
Confidence 9999999998752 333 45677888888863 45567789999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1495 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH 1495 (1620)
||+|+|||+..+.++..+.+|.. .|+||++.+. .+|++||.|++|++|+...|.++..++||
T Consensus 226 Dg~vrIWd~~~~~~~~~lsgHT~------~VTCvrwGG~------------gliySgS~DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 226 DGSVRIWDTKLGTCVRTLSGHTA------SVTCVRWGGE------------GLIYSGSQDRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CCCEEEEEccCceEEEEeccCcc------ceEEEEEcCC------------ceEEecCCCceEEEEEccchhHHHhhccc
Confidence 99999999999999999997654 4899998642 48999999999999999999999999999
Q ss_pred CCcEEEEE-eC------------------------------------CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecC
Q 000355 1496 DGYVTKLA-AP------------------------------------EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH 1538 (1620)
Q Consensus 1496 ~~~V~sva-sp------------------------------------dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH 1538 (1620)
..+|+.++ +. ++..|+|||+|.++.+|+....+ +++..+.||
T Consensus 288 ahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgH 366 (480)
T KOG0271|consen 288 AHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGH 366 (480)
T ss_pred chheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhch
Confidence 99999998 61 12359999999999999987653 566789999
Q ss_pred CCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCc
Q 000355 1539 TNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGY 1615 (1620)
Q Consensus 1539 ~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~ 1615 (1620)
..-|+. ||||++++||+|.|+ |++|+.. +|+.. ...+ +|...|+.++|+.|.|+|++||.|.+
T Consensus 367 q~lVn~V~fSPd~r~IASaSFDkSVkLW~g~-----tGk~l-------asfR--GHv~~VYqvawsaDsRLlVS~SkDsT 432 (480)
T KOG0271|consen 367 QALVNHVSFSPDGRYIASASFDKSVKLWDGR-----TGKFL-------ASFR--GHVAAVYQVAWSADSRLLVSGSKDST 432 (480)
T ss_pred hhheeeEEECCCccEEEEeecccceeeeeCC-----Ccchh-------hhhh--hccceeEEEEeccCccEEEEcCCCce
Confidence 999994 999999999999999 9999965 44431 1112 59999999999999999999999999
Q ss_pred EEEcC
Q 000355 1616 LRLCC 1620 (1620)
Q Consensus 1616 IrlWd 1620 (1620)
+++|+
T Consensus 433 LKvw~ 437 (480)
T KOG0271|consen 433 LKVWD 437 (480)
T ss_pred EEEEE
Confidence 99996
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=377.32 Aligned_cols=174 Identities=21% Similarity=0.210 Sum_probs=143.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc-ccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN-Iv~ 181 (1620)
+..|+.+++||+|+||+||+|++. .+|+.||+|++...... ++ ....++||+.+|+.|+|+| ||.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~-EG-------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEE-EG-------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccc-cC-------CCchhhHHHHHHHHhCCCcceEE
Confidence 667899999999999999999972 46799999999875432 11 1223579999999999999 999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
|++++.+.+ .+++||||++.||..++...+. ..++...++.+++||++||+|||+++|+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999999888 8999999999999999996543 35777899999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+| .+||+|||+|+......+ +-+...+|.+|+|||++
T Consensus 156 ~G--~lKlaDFGlAra~~ip~~-----------~yt~evvTlWYRaPEvL 192 (323)
T KOG0594|consen 156 SG--VLKLADFGLARAFSIPMR-----------TYTPEVVTLWYRAPEVL 192 (323)
T ss_pred CC--cEeeeccchHHHhcCCcc-----------cccccEEEeeccCHHHh
Confidence 99 899999999994321111 02233466777777764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=380.81 Aligned_cols=154 Identities=20% Similarity=0.226 Sum_probs=140.2
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 178 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpN 178 (1620)
.+...+|..++.||+|+|++|++|++. .+++.+|||++.+.....+.....+. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 344679999999999999999999972 46899999999887666666556664 899999999 8999
Q ss_pred ccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|++||..|+++..+|+|+||++ |+|.++|+ +.+.+.+..+|+|+.||+.||+|||++|||||||||||||||.++
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 9999999999999999999999 69999999 578899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccC
Q 000355 258 WLYICDKPLVGFN 270 (1620)
Q Consensus 258 ~lKL~DFGla~~~ 270 (1620)
++||+|||.|+..
T Consensus 212 hikITDFGsAK~l 224 (604)
T KOG0592|consen 212 HIKITDFGSAKIL 224 (604)
T ss_pred cEEEeeccccccC
Confidence 9999999999954
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=375.60 Aligned_cols=146 Identities=25% Similarity=0.366 Sum_probs=127.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
-.|.-.+.+|.|+||.||+|.. .++++.+|||++-.++.... +|+++|++++|||||+|.
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~------~e~~~~vAIKKv~~d~r~kn--------------rEl~im~~l~HpNIV~L~ 83 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKL------RETEEEVAIKKVLQDKRYKN--------------RELQIMRKLDHPNIVRLL 83 (364)
T ss_pred EEEEeeEEEeecccceEEEEEE------cCCCceeEEEEecCCCCcCc--------------HHHHHHHhcCCcCeeeEE
Confidence 3788899999999999999985 24579999999987655432 899999999999999999
Q ss_pred eEEEeCC-----EEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 184 GLLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 184 ~~~~~~~-----~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
.+|.... .+.+|||||+.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+.
T Consensus 84 ~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t- 162 (364)
T KOG0658|consen 84 YFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT- 162 (364)
T ss_pred EEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-
Confidence 9887542 5679999999999999984 2356788999999999999999999999999999999999999884
Q ss_pred eEEEEeecCCcccC
Q 000355 257 SWLYICDKPLVGFN 270 (1620)
Q Consensus 257 ~~lKL~DFGla~~~ 270 (1620)
+.+||||||.|+..
T Consensus 163 g~LKicDFGSAK~L 176 (364)
T KOG0658|consen 163 GVLKICDFGSAKVL 176 (364)
T ss_pred CeEEeccCCcceee
Confidence 28999999999943
|
|
| >KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=431.37 Aligned_cols=240 Identities=34% Similarity=0.504 Sum_probs=204.6
Q ss_pred cccccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCCC-CCCCCCCCCCCCccHHhhhccccc-cccccc
Q 000355 310 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 386 (1620)
Q Consensus 310 ~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~~-~~~~~~~~rdlsk~~~~~~~~~~~-~~~~~~ 386 (1620)
..+..|+.|+|+||+|+|.+|..+||+++|++||||||||+ ||.+.. |.+.+.+||||+||+|++|..... +..+|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 46778999999999999999999999999999999999999 887654 889999999999999999876544 455676
Q ss_pred CCC----CCCccCccccccceeeecccccCchHHHHHHhhcc--cCCCCccchHHHhhc------CCCCccccCcccCCc
Q 000355 387 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQ------WTPDECIPEFYCDPQ 454 (1620)
Q Consensus 387 ~~~----~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~------~~~~eliPef~~~p~ 454 (1620)
+.+ ..+||++||++...+++|++|.+||+.++++++.+ +.+.+-+++..+-|. .|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 654 34799999999999999999999999999988754 445444444443332 368999999999999
Q ss_pred ccccCC----------CCCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCC
Q 000355 455 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 524 (1620)
Q Consensus 455 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~ 524 (1620)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|+||||||||||+|++|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 998753 4689999999999999999999999999999999999999999999999999999999998764
Q ss_pred CC-----------C--------cccCC--cccccCCCCCCCCCCcc
Q 000355 525 PT-----------K--------PKSVG--RLQLFTQPHPVRQTATW 549 (1620)
Q Consensus 525 ~~-----------~--------~~~~g--~~qlf~~pHp~r~~~~~ 549 (1620)
.. . +.++| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 21 0 12456 79999999999976655
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=374.17 Aligned_cols=173 Identities=26% Similarity=0.319 Sum_probs=153.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|.+.+.||+|+||.||||+++ .+.+.||+|.+.+.+...++.+... +|++|++.|+|||||.+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m 66 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEM 66 (808)
T ss_pred CcchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhH
Confidence 468999999999999999999963 4679999999999888777777766 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|++..++++|.|||.|+|..++. ..+.++|+.++.+++|++.||.|||+++|+|||+||.|||++.++ .+|+|
T Consensus 67 ~esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klc 142 (808)
T KOG0597|consen 67 LESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLC 142 (808)
T ss_pred HHhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeec
Confidence 99999999999999999999999999 578899999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|||+||...... ...+...|||.|||||++.
T Consensus 143 dFg~Ar~m~~~t-----------~vltsikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 143 DFGLARAMSTNT-----------SVLTSIKGTPLYMAPELVE 173 (808)
T ss_pred hhhhhhhcccCc-----------eeeeeccCcccccCHHHHc
Confidence 999999543210 1123445899999999864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=366.66 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=180.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|.+.+.||+|+||+||+|+++ .++..||||.+.+.+...+..+... .|+.+|++++|||||.
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV~ 73 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIVR 73 (429)
T ss_pred ccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCcceee
Confidence 4779999999999999999999973 4569999999988665444333333 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC-Cc---
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW--- 256 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-~~--- 256 (1620)
|++++++++++|||||||. |||.++|+ ..+.++|..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 74 l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~ 151 (429)
T KOG0595|consen 74 LLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTS 151 (429)
T ss_pred EEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCC
Confidence 9999999999999999999 69999999 56689999999999999999999999999999999999999875 22
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
..+||+|||+||...... ...+-| |+|.|||||++....|+.+.|+|+.|.|. |+++.+..+|...+
T Consensus 152 ~~LKIADFGfAR~L~~~~-----------~a~tlc-GSplYMAPEV~~~~~YdAKADLWSiG~Il-yq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQPGS-----------MAETLC-GSPLYMAPEVIMSQQYDAKADLWSIGTIL-YQCLTGKPPFDAET 218 (429)
T ss_pred ceEEecccchhhhCCchh-----------HHHHhh-CCccccCHHHHHhccccchhhHHHHHHHH-HHHHhCCCCccccC
Confidence 379999999999654211 112223 68999999999999999999999999998 99999999988777
Q ss_pred CCCC
Q 000355 337 WGDY 340 (1620)
Q Consensus 337 ~~dl 340 (1620)
..++
T Consensus 219 ~~eL 222 (429)
T KOG0595|consen 219 PKEL 222 (429)
T ss_pred HHHH
Confidence 6655
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=359.50 Aligned_cols=184 Identities=17% Similarity=0.242 Sum_probs=152.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++.+.++.||+|+.|+||||+++ .+++++|+|.+..+ ......++.+ +|++++++++|||||++
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 457888999999999999999972 57899999999543 3334444555 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
|++|..+. .++|+||||+ |+|.++++ ..+.++|.....+++++++||.|||+ ++||||||||+||||+..| .+
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 99999999 5999999999 59999998 45789999999999999999999996 9999999999999999999 99
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
||||||.++..... ......||..|||||.+.+..|+...|+|+.|
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLG 264 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERISGESYSVKSDIWSLG 264 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhcCCcCCcccceeccc
Confidence 99999999954311 12234588999999988765444444444444
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=325.87 Aligned_cols=146 Identities=23% Similarity=0.256 Sum_probs=132.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCC--cHhHHHhhccCCcccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVP--SFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~--~~~Ei~iL~~l~HpNIv~ 181 (1620)
.+|...++||+|+||+||+|++ .+++++||+|.++.+.... |+| ++|||.+|++++|.|||+
T Consensus 2 ~~ydkmekigegtygtvfkarn------~~t~eivalkrvrldddde----------gvpssalreicllkelkhknivr 65 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARN------RETHEIVALKRVRLDDDDE----------GVPSSALREICLLKELKHKNIVR 65 (292)
T ss_pred cchHHHHhhcCCcceeeEeccc------CCccceEEEEEEeccCCCC----------CCcHHHHHHHHHHHHhhhcceee
Confidence 4688889999999999999985 2678999999998754332 233 469999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..+.+|+|||..+|..+... -++.+....++.++.|+++||.|||+++++||||||.|+||+.+| .+|+
T Consensus 66 l~dvlhsdkkltlvfe~cdqdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elkl 142 (292)
T KOG0662|consen 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKL 142 (292)
T ss_pred hhhhhccCceeEEeHHHhhHHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEe
Confidence 9999999999999999999999999984 467789999999999999999999999999999999999999999 9999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+||
T Consensus 143 adfglar 149 (292)
T KOG0662|consen 143 ADFGLAR 149 (292)
T ss_pred cccchhh
Confidence 9999999
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=347.85 Aligned_cols=277 Identities=21% Similarity=0.264 Sum_probs=244.6
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC--CCeEEEe--CCcEEEEeC
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSS--SGRIASC--DGTLHVWNS 1342 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~--~~~laS~--DgtV~IWD~ 1342 (1620)
|-+.+|..+.||.|+..|+||| |+|+++||+..+...+++|.||++.|.++.|+|. +..++|+ ||+|++|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~s----wsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGS----WSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKL 248 (459)
T ss_pred cCCCcceeeEeecCCCeEEEee----cCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeecc
Confidence 5678999999999999999999 5999999999999999999999999999999997 3356655 999999999
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.+...+..+.+|. ..|..++|+|+|++++++|.|.+-|+|
T Consensus 249 ~~e~~l~~l~gH~----------------------------------------~RVs~VafHPsG~~L~TasfD~tWRlW 288 (459)
T KOG0272|consen 249 SQETPLQDLEGHL----------------------------------------ARVSRVAFHPSGKFLGTASFDSTWRLW 288 (459)
T ss_pred CCCcchhhhhcch----------------------------------------hhheeeeecCCCceeeecccccchhhc
Confidence 9888888888763 225667777889999999999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
|++++..+....||. ..|.+++|. +||.++++|+-|..-+|||+|+|.++..+.||..+|.+|
T Consensus 289 D~~tk~ElL~QEGHs------~~v~~iaf~-----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 289 DLETKSELLLQEGHS------KGVFSIAFQ-----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred ccccchhhHhhcccc------cccceeEec-----------CCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 999999887777654 447888875 677899999999999999999999999999999999999
Q ss_pred E-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEee-cCCEEEEEeCCc-eEEEeccCCCCCCCccee
Q 000355 1503 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSV-WGQDVISISNNK-IGLSSLSKSADEDGQHRL 1577 (1620)
Q Consensus 1503 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSp-dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1577 (1620)
+ +|+|..|||||.|++++|||++.. ..++++.+|++-|+ +|+| .|.+|+|+|.|. +++|.-. +.++
T Consensus 352 ~fsPNGy~lATgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~-----~~~~-- 422 (459)
T KOG0272|consen 352 AFSPNGYHLATGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR-----TWSP-- 422 (459)
T ss_pred eECCCceEEeecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCeEEEEcccCcceeeecCC-----Cccc--
Confidence 9 999999999999999999999987 56899999999998 5998 689999999999 9999954 2222
Q ss_pred eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1578 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1578 ~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+... .||.+.|-+++++||+..++|+|.|.++|+|.
T Consensus 423 ----~ksL---aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 423 ----LKSL---AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ----chhh---cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 1111 26999999999999999999999999999994
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=346.46 Aligned_cols=158 Identities=19% Similarity=0.220 Sum_probs=132.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
....|+.++.||+|+||.||+|....... ...+.+|||+++..+... .+.+.++||+.++++++|||||.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~--kr~k~yAiKkfk~~kd~t--------GiS~SAcREiaL~REl~h~nvi~ 91 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTND--KRTKEYAIKKFKGEKDGT--------GISMSACREIALLRELKHPNVIS 91 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCc--ccchhhHHHHHhccCCCC--------CcCHHHHHHHHHHHHhcCCcchh
Confidence 35689999999999999999997543321 224589999998754422 12234679999999999999999
Q ss_pred eeeEEEe-CCEEEEEEeCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-
Q 000355 182 VLGLLKT-SGLITSVIPKTPYTLENILQFS---PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW- 256 (1620)
Q Consensus 182 l~~~~~~-~~~~~lV~E~~~g~L~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~- 256 (1620)
|..+|.+ +..+++++||.+.||..+|++. ..+.++...++.|+.||+.|+.|||++.|+||||||.|||+..+|.
T Consensus 92 Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 92 LVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCc
Confidence 9999987 7799999999999999999863 3456899999999999999999999999999999999999998832
Q ss_pred -eEEEEeecCCccc
Q 000355 257 -SWLYICDKPLVGF 269 (1620)
Q Consensus 257 -~~lKL~DFGla~~ 269 (1620)
+.+||+|||+||.
T Consensus 172 rG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 172 RGRVKIADLGLARL 185 (438)
T ss_pred cCeeEeecccHHHH
Confidence 2899999999994
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=357.40 Aligned_cols=206 Identities=18% Similarity=0.210 Sum_probs=182.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+++.. .+++++|+|++++.+.......+.+. +|..||..++||+||++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 679999999999999999999852 67899999999998777664444443 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+..|++.+++|||+||+.| +|..+|. +++.++|..+++|+.+|+.||.|||++|||||||||||||||.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999995 9999998 688999999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||||++........ + .+.| ||+.|||||++.+.+|+.++|+|+.|.+. ||+|++..+|.++..
T Consensus 167 tDFgL~k~~~~~~~~-----t-----~tfc-GT~eYmAPEil~~~gy~~~vDWWsLGill-YeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 167 TDFGLCKEDLKDGDA-----T-----RTFC-GTPEYMAPEILLGKGYDKAVDWWSLGILL-YEMLTGKPPFYAEDV 230 (357)
T ss_pred eccccchhcccCCCc-----c-----cccc-CCccccChHHHhcCCCCcccchHhHHHHH-HHHhhCCCCCcCccH
Confidence 999999954322211 1 1223 69999999999999999999999999777 999999999988764
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=347.56 Aligned_cols=274 Identities=20% Similarity=0.286 Sum_probs=244.6
Q ss_pred cCCCcee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccC--CCEEEEeccCCCCCcEE
Q 000355 1223 KCEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTV 1297 (1620)
Q Consensus 1223 gH~~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspd--g~~LaSgs~d~~~DgtV 1297 (1620)
|-+..|. .||.|+.. |+|||.+|.+++|+.. ...+++|+||++.|.++.|+|. +..+|||+. ||+|
T Consensus 173 gd~rPis~~~fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtv 243 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTV 243 (459)
T ss_pred cCCCcceeeEeecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCce
Confidence 4444554 38999986 9999999999999988 7899999999999999999997 568999997 9999
Q ss_pred EEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEE--eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccc
Q 000355 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1298 rLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS--~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
++|++.+...++.+.||...|..|+|+|+|.+|++ .|.+-++||+.+++.+....+|
T Consensus 244 klw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGH--------------------- 302 (459)
T KOG0272|consen 244 KLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGH--------------------- 302 (459)
T ss_pred eeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccc---------------------
Confidence 99999999999999999999999999999999954 4999999999998876544444
Q ss_pred cccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCC
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1455 (1620)
+.+|.++ +|.+||..+++|+.|..-||||+++|+++..+.+|.. .|.+|+|+
T Consensus 303 ---------s~~v~~i----------af~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k------~I~~V~fs--- 354 (459)
T KOG0272|consen 303 ---------SKGVFSI----------AFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK------EILSVAFS--- 354 (459)
T ss_pred ---------cccccee----------EecCCCceeeccCccchhheeecccCcEEEEeccccc------ceeeEeEC---
Confidence 4444444 4556799999999999999999999999999998655 47888886
Q ss_pred ccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1456 ~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
|+|-.+|||+.|++++|||+|..+.+.++.+|.+-|+.|. +| .|.+|+|||.|++++||...+. .++.
T Consensus 355 --------PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~--~~~k 424 (459)
T KOG0272|consen 355 --------PNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW--SPLK 424 (459)
T ss_pred --------CCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc--ccch
Confidence 6778999999999999999999999999999999999999 77 6889999999999999999988 7788
Q ss_pred EeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1534 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1534 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
++.||.+.|.+ +++|++.++|++.|+ +++|.
T Consensus 425 sLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 425 SLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999999995 999999999999999 99995
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=368.10 Aligned_cols=177 Identities=17% Similarity=0.206 Sum_probs=149.2
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+...-|++++.||.|+-|.|.+|++ .++|+.+|||++.+.....+....-++ +||-||+.+.||||
T Consensus 8 ~~tiGpwkLgkTLG~Gstg~vrlakh------~~TGqlaaiKii~k~~~~s~s~~~~Ie-------rEIviMkLi~HpnV 74 (786)
T KOG0588|consen 8 KNTIGPWKLGKTLGKGSTGCVRLAKH------AETGQLAAIKIIPKRSELSSSQPAGIE-------REIVIMKLIEHPNV 74 (786)
T ss_pred cccccceeccccccCCCCceehhhhc------ccccceeEEEeeccccccccccccchh-------hhhHHHHHhcCCCe
Confidence 34477899999999999999999886 478999999999886433332222222 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++||++++++.++|+|+||++ |.|++++. .++.+++.+++.+++||+.|+.|||..+|+||||||+|+||+..+ +
T Consensus 75 l~LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--n 150 (786)
T KOG0588|consen 75 LRLYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--N 150 (786)
T ss_pred eeeeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--C
Confidence 999999999999999999999 59999998 678899999999999999999999999999999999999999999 7
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
+||+|||+|..-... .+-.+.|| .|.|.+||++.+
T Consensus 151 IKIADFGMAsLe~~g-----------klLeTSCG-SPHYA~PEIV~G 185 (786)
T KOG0588|consen 151 IKIADFGMASLEVPG-----------KLLETSCG-SPHYAAPEIVSG 185 (786)
T ss_pred EeeeccceeecccCC-----------ccccccCC-CcccCCchhhcC
Confidence 999999999832111 11234454 789999998754
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=372.45 Aligned_cols=148 Identities=21% Similarity=0.202 Sum_probs=132.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-c-----cc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 178 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-H-----pN 178 (1620)
+|++++.||+|+||.|.+|.+. .+++.||||+++..+.. ..+.. .|+.||..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f---~~Q~~--------~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRF---LRQAQ--------IEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHH---HHHHH--------HHHHHHHHHhccCCCCCee
Confidence 7899999999999999999982 56899999999875433 22333 8999999997 4 38
Q ss_pred ccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
||+++++|...+++|||+|.+..+|+++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+-+...
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999998776668
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
|||+|||.|..
T Consensus 330 vKVIDFGSSc~ 340 (586)
T KOG0667|consen 330 IKVIDFGSSCF 340 (586)
T ss_pred eeEEecccccc
Confidence 99999999984
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=361.79 Aligned_cols=313 Identities=17% Similarity=0.268 Sum_probs=204.6
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCCC-------CeEEEEEecCCcceeEEEEeeC
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTR-------INCVSGYYGHEEVVNDICVLSS 1326 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~t-------g~~l~~l~gH~~~V~sV~f~~~ 1326 (1620)
|+.+|..+..|..|...|..++.++.. .+++|||. ||+||+|+... .++..++.--...+.++.+...
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~----DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSD----DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecC----CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence 888899999999999999999998776 99999997 99999999743 2344455545678888888888
Q ss_pred CCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEe
Q 000355 1327 SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI 1404 (1620)
Q Consensus 1327 ~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s 1404 (1620)
+..+ ++.||.|++.++.-......... +..+.+ ....+..+.+.++.
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~---------------------~~ri~n----------~~~~g~vv~m~a~~ 1158 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVAT---------------------QVRIPN----------LKKDGVVVSMHAFT 1158 (1431)
T ss_pred CCeEEEEcCCCeEEEEEccccccccceee---------------------eeeccc----------ccCCCceEEeeccc
Confidence 8877 45599999999875211100000 000000 01111122222222
Q ss_pred c-CCC-EEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEE
Q 000355 1405 E-CVE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1482 (1620)
Q Consensus 1405 ~-dg~-~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD 1482 (1620)
. ++. .++.+..-+.|..||+++.....+++... -.+.|+++|.+ |.++|++.|++.|.+.+||
T Consensus 1159 ~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~----~hG~vTSi~id-----------p~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1159 AIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL----RHGLVTSIVID-----------PWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred ccccceeEEEEEeccceEEecchhhhhHHhhhcCc----cccceeEEEec-----------CCceEEEEecCCceEEEEE
Confidence 2 223 67788888999999999876665554332 24568888876 5567999999999999999
Q ss_pred CCCCcEEEEEE-ccCCcEEEEE-eCC---CCEEEEEe--CCCcEEEEECCCCCCCCCeEeecC-----------------
Q 000355 1483 VRSGNVIASWR-AHDGYVTKLA-APE---DHLLVSSS--LDKTLRIWDLRRNWPSQPTVFKGH----------------- 1538 (1620)
Q Consensus 1483 ~~tg~~i~~l~-gH~~~V~sva-spd---g~~LaSgS--~DgtI~IWDl~~~~~~~~~~l~gH----------------- 1538 (1620)
+|=+.++..|. ++..+++.|. +|- ....++++ ..+.|.+|++.++..+. ++-..
T Consensus 1224 LRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~--vl~~s~~~p~ls~~~Ps~~~~k 1301 (1431)
T KOG1240|consen 1224 LRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQT--VLWASDGAPILSYALPSNDARK 1301 (1431)
T ss_pred eecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceE--EEEcCCCCcchhhhcccccCCC
Confidence 99999999997 5668888888 442 24555444 57789999999884322 22211
Q ss_pred CC---CEE-EEeecCCEEEEEeCCc-eEEEeccCCCCC-----------------------CCcce----------eecc
Q 000355 1539 TN---GIS-GFSVWGQDVISISNNK-IGLSSLSKSADE-----------------------DGQHR----------LVPQ 1580 (1620)
Q Consensus 1539 ~~---~V~-afSpdg~~LaSgs~D~-I~vwdl~~~~~~-----------------------~g~~~----------~~~~ 1580 (1620)
.. .+. ++.--+..+.+|+.|. |+.||...+... .|... ...+
T Consensus 1302 p~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t 1381 (1431)
T KOG1240|consen 1302 PDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLT 1381 (1431)
T ss_pred CCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCch
Confidence 01 111 2444466777777666 999997643211 00000 0000
Q ss_pred ----ceeeecCC-----CCccccEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000355 1581 ----KLYMVDNG-----AKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1581 ----kl~~~~~g-----~~h~~~V~svafsPdg-~lLasgs~DG~IrlW 1619 (1620)
+......+ ..|..+|+++++.-+. .+|++++.||.|+||
T Consensus 1382 ~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiW 1430 (1431)
T KOG1240|consen 1382 EALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIW 1430 (1431)
T ss_pred hhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeec
Confidence 00001111 1677889998887544 689999999999999
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=334.72 Aligned_cols=177 Identities=18% Similarity=0.180 Sum_probs=146.9
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
....+.|++.+.||+|.|+.|+++.+ ..+|+.+|+|++..++....+.++.- +|+.|-+.|+||||
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~------~~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~I 72 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVH------KTTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNI 72 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHh------ccchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcE
Confidence 34578899999999999999999875 36789999999988777766555554 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-e
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-S 257 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~ 257 (1620)
|+|++.+......|||+|+|.| +|..-|- ....++|..+..+++||+.||.|||.+||||||+||+|+|+.+... .
T Consensus 73 vrL~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A 150 (355)
T KOG0033|consen 73 VRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGA 150 (355)
T ss_pred eehhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCC
Confidence 9999999999999999999996 7766555 2356799999999999999999999999999999999999965432 4
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
-+||+|||+|...... ..-.+..|||.|||||++.
T Consensus 151 ~vKL~~FGvAi~l~~g------------~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 151 AVKLADFGLAIEVNDG------------EAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred ceeecccceEEEeCCc------------cccccccCCCcccCHHHhh
Confidence 7999999999954311 1122345899999998863
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=363.94 Aligned_cols=175 Identities=17% Similarity=0.134 Sum_probs=147.0
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNI 179 (1620)
-..++|.++++||+|+||+|+++..+ .+++.+|||.++++.+...+..+.+. .|.+|+.... ||.+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPFL 431 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPFL 431 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCeE
Confidence 34679999999999999999999862 45789999999998777665555442 8999888775 9999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++|+..|++++++|+||||+.| |+..++ ..+.+++..+++|++.|+.||+|||++|||+||||.+|||+|.+| +
T Consensus 432 ~~L~~~fQT~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h 506 (694)
T KOG0694|consen 432 VNLFSCFQTKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--H 506 (694)
T ss_pred eecccccccCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--c
Confidence 9999999999999999999996 733332 467899999999999999999999999999999999999999999 9
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
+||+|||++|........+ .+.| |||.|||||++.
T Consensus 507 ~kiADFGlcKe~m~~g~~T----------sTfC-GTpey~aPEil~ 541 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQGDRT----------STFC-GTPEFLAPEVLT 541 (694)
T ss_pred EEecccccccccCCCCCcc----------cccc-CChhhcChhhhc
Confidence 9999999999654332211 2344 599999999874
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=358.61 Aligned_cols=176 Identities=22% Similarity=0.222 Sum_probs=146.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh--hHHHHHHhcCCCcHhHHHhhccCC-ccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPN 178 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~~~~~~~~~Ei~iL~~l~-HpN 178 (1620)
..++|.+.+.||+|+||+|++|++. .++..||+|++.+.+.... ...+.+. +|+.+++.++ |||
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~Hpn 81 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPN 81 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCC
Confidence 3679999999999999999999872 4569999998776533311 2233332 8999999999 999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC-Cc
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW 256 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-~~ 256 (1620)
|+++++++.+...+|+||||+.| +|.+++.. .+++.|.+++.+++||+.|++|||++||+||||||||||++.+ +
T Consensus 82 I~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~- 158 (370)
T KOG0583|consen 82 IIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG- 158 (370)
T ss_pred EeEEEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC-
Confidence 99999999999999999999995 99999993 7889999999999999999999999999999999999999999 7
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
++||+|||++..... .+.....+.||+.|+|||++.+
T Consensus 159 -~~Kl~DFG~s~~~~~-----------~~~~l~t~cGsp~Y~aPEvl~~ 195 (370)
T KOG0583|consen 159 -NLKLSDFGLSAISPG-----------EDGLLKTFCGSPAYAAPEVLSG 195 (370)
T ss_pred -CEEEeccccccccCC-----------CCCcccCCCCCcccCCHHHhCC
Confidence 899999999995420 0111222336899999999743
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=340.50 Aligned_cols=210 Identities=19% Similarity=0.198 Sum_probs=183.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|+++++||+|+||+||++.+ ..+|+.+|.|.+.-+....+...+.+ .|+.+|+.|+|||||++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~------~~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVqY 83 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQC------LLDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQY 83 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeee------ccCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHHH
Confidence 56899999999999999999986 46889999999987666666666666 89999999999999999
Q ss_pred ee-EEEeCCE-EEEEEeCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCceEecC
Q 000355 183 LG-LLKTSGL-ITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~-~~~~~~~-~~lV~E~~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~--~g--IiHRDLKP~NILl~~ 253 (1620)
|+ .|..++. ++||||||+ |||.++|++ ...+.++|..++.++.|++.||.+||. .. |+||||||.||+|+.
T Consensus 84 y~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~ 163 (375)
T KOG0591|consen 84 YAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA 163 (375)
T ss_pred HHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC
Confidence 99 5655555 999999999 799999985 345679999999999999999999999 55 999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
+| .+||+|||++|..... ..+..+.+|||+||+||++.+.+|+.++|+|+.||+. ||+.+.-.+|.
T Consensus 164 ~g--vvKLGDfGL~r~l~s~-----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll-yEMcaL~~PF~ 229 (375)
T KOG0591|consen 164 NG--VVKLGDFGLGRFLSSK-----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL-YEMCALQSPFY 229 (375)
T ss_pred CC--ceeeccchhHhHhcch-----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH-HHHHhcCCCcc
Confidence 99 8999999999964321 1223456799999999999999999999999999998 99999999999
Q ss_pred CCCCCCC
Q 000355 334 GRRWGDY 340 (1620)
Q Consensus 334 gRs~~dl 340 (1620)
||++-.|
T Consensus 230 g~n~~~L 236 (375)
T KOG0591|consen 230 GDNLLSL 236 (375)
T ss_pred cccHHHH
Confidence 9987555
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=310.00 Aligned_cols=280 Identities=19% Similarity=0.240 Sum_probs=249.5
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
..+|.||.+.|++ |++|++. ++|+|.||.+.|||.. +..++.+.-....|..++|+|.|+++|+||. |
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----d 118 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----D 118 (343)
T ss_pred EEEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----C
Confidence 4789999999998 9999997 9999999999999976 7788888888999999999999999999998 8
Q ss_pred cEEEEEeCCCC------eEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCC
Q 000355 1295 GTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1367 (1620)
Q Consensus 1295 gtVrLWdl~tg------~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1367 (1620)
+...|+++.+. ...+.+.||++.+.++.|.+++..| +|+|.|..+||+++|+.++.|.+|..
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~g----------- 187 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTG----------- 187 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcc-----------
Confidence 99999999855 4567799999999999998877777 88899999999999999999987743
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccc
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~ 1447 (1620)
.|.++++.|. +++.+++|+.|++.++||+|.+.++++|.+|... |+
T Consensus 188 -------------------DV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesD------IN 233 (343)
T KOG0286|consen 188 -------------------DVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESD------IN 233 (343)
T ss_pred -------------------cEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeecccccc------cc
Confidence 3444444442 7999999999999999999999999999987654 89
Q ss_pred eEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc--cCCcEEEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1448 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1448 sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
+|+|. |+|.-+++|++|+++|+||+|....+..+.. -..+|++|+ +..|++|.+|..|.++.+||.
T Consensus 234 sv~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 234 SVRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred eEEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 99986 6777999999999999999999999888872 246899999 999999999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1525 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
-.+ ..+..+.||.+.|+| .+|||..++|||.|. ++||.
T Consensus 303 lk~--e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 303 LKG--ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccc--ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 887 677899999999997 899999999999999 99994
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=342.73 Aligned_cols=174 Identities=18% Similarity=0.162 Sum_probs=139.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|...+.||+|+||.||++.+. .+|...|||.+....... .+.+. +|+.+|.+++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 457888999999999999999972 347899999987652221 22222 99999999999999999
Q ss_pred eeEEEeCC--EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceE
Q 000355 183 LGLLKTSG--LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 258 (1620)
Q Consensus 183 ~~~~~~~~--~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~ 258 (1620)
++...... .+++.|||++ |+|.+++..... .+++..++.+.+||++||.|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99855555 6999999999 599999996444 7999999999999999999999999999999999999999 67 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+||+|||+++......... .......||+.|||||++
T Consensus 157 ~KlaDFG~a~~~~~~~~~~--------~~~~~~~Gtp~~maPEvi 193 (313)
T KOG0198|consen 157 VKLADFGLAKKLESKGTKS--------DSELSVQGTPNYMAPEVI 193 (313)
T ss_pred EEeccCccccccccccccc--------cccccccCCccccCchhh
Confidence 9999999998543210000 112234578888888875
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=325.44 Aligned_cols=153 Identities=20% Similarity=0.238 Sum_probs=135.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||.|.-|+||+|+.. .++..+|+|++.+....... +.. ++..|-+||+.++||.++.||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~rk--Kl~-----Ra~tE~eIL~~lDHPFlPTLY 143 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASRK--KLK-----RAQTEREILSLLDHPFLPTLY 143 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhhh--HHH-----HHHHHHHHHHhcCCCccchhh
Confidence 48999999999999999999962 34589999999875444321 222 223899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
..|++++..|+|||||+| +|..+.+..+.+.+++..+|+|+.+++.||+|||-.|||.||||||||||-++| +|.|+
T Consensus 144 a~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIMLs 221 (459)
T KOG0610|consen 144 ASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIMLS 221 (459)
T ss_pred heeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEee
Confidence 999999999999999995 999999988999999999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCC
Q 000355 263 DKPLVGFNS 271 (1620)
Q Consensus 263 DFGla~~~~ 271 (1620)
||-|+..+.
T Consensus 222 DFDLS~~~~ 230 (459)
T KOG0610|consen 222 DFDLSLRCP 230 (459)
T ss_pred eccccccCC
Confidence 999998653
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=346.57 Aligned_cols=230 Identities=14% Similarity=0.191 Sum_probs=190.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++++.||+|+||.||+|+. ..+|.++|+|++++......+....++ .|-.+|...++|+||+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarK------k~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARK------KDTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVK 205 (550)
T ss_pred CcccchhheeeccccceeEEEEEE------ccCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEE
Confidence 467999999999999999999985 257899999999987666655555554 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
||..|++.+++||||||++| |+..+|. ..+.+++..+++|+.+++.|++.||+.|+|||||||+|+|||..| ++|
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiK 281 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIK 281 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEe
Confidence 99999999999999999995 9999998 678999999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCc------------cc-------CCC--CCCc---------------cceecccccCccchhhhccc
Q 000355 261 ICDKPLVGFNSIADW------------CT-------IPT--SPMI---------------GCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 L~DFGla~~~~~~~~------------~~-------~~~--~~~~---------------~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|+||||+........ .. ... ++.. .......+|||-|||||++.
T Consensus 282 LSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll 361 (550)
T KOG0605|consen 282 LSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL 361 (550)
T ss_pred eccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh
Confidence 999999963221000 00 000 0000 01223578999999999999
Q ss_pred ccccccccccccccccchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 305 SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 305 ~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
+.+|+..||+|+.|||. ||+|.+..+|.+-+.++. .--|+-|..
T Consensus 362 ~kgY~~~cDwWSLG~Im-yEmLvGyPPF~s~tp~~T-~rkI~nwr~ 405 (550)
T KOG0605|consen 362 GKGYGKECDWWSLGCIM-YEMLVGYPPFCSETPQET-YRKIVNWRE 405 (550)
T ss_pred cCCCCccccHHHHHHHH-HHHHhCCCCCCCCCHHHH-HHHHHHHhh
Confidence 99999999999999998 999999999999876432 223555654
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=299.35 Aligned_cols=283 Identities=19% Similarity=0.293 Sum_probs=237.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1338 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~ 1338 (1620)
..++|+||.+.|.++.|++|.+.++|+|. ||.+.|||.-|...+..++--...|..++|+|++..+|++ |+...
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSq----DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQ----DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCS 122 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeecc----CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeE
Confidence 34899999999999999999999999998 9999999999999888888889999999999999999665 99999
Q ss_pred EEeCCCCc------eEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1339 VWNSQTGK------LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1339 IWD~~tg~------~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
||++.+.+ ..+.+.+ |++ .++|..|.+ ...|++
T Consensus 123 iy~ls~~d~~g~~~v~r~l~g------------------------------Htg----------ylScC~f~d-D~~ilT 161 (343)
T KOG0286|consen 123 IYPLSTRDAEGNVRVSRELAG------------------------------HTG----------YLSCCRFLD-DNHILT 161 (343)
T ss_pred EEecccccccccceeeeeecC------------------------------ccc----------eeEEEEEcC-CCceEe
Confidence 99998652 1222222 233 345555555 668999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
+|.|.+..+||+++|+.+..|.+|.+. |-+++++|+ +++++++|+.|++.++||+|.+.++++|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f~GH~gD------V~slsl~p~----------~~ntFvSg~cD~~aklWD~R~~~c~qtF 225 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVFHGHTGD------VMSLSLSPS----------DGNTFVSGGCDKSAKLWDVRSGQCVQTF 225 (343)
T ss_pred cCCCceEEEEEcccceEEEEecCCccc------EEEEecCCC----------CCCeEEecccccceeeeeccCcceeEee
Confidence 999999999999999999999987664 677777542 5689999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEee--cCCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK--GHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~--gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.||+..|++|. .|+|.-++|||+|++.++||++... ++..+. .-..+|+ +||..|++|.+|..|. +.|||..
T Consensus 226 ~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~--~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtl 303 (343)
T KOG0286|consen 226 EGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQ--ELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTL 303 (343)
T ss_pred cccccccceEEEccCCCeeeecCCCceeEEEeecCCc--EEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecc
Confidence 99999999999 9999999999999999999999973 344443 2234566 4999999999998888 9999975
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+. .. ...+ . +|.+.|+++..+|||..++|||+|.+||||.
T Consensus 304 k~-----e~---vg~L----~--GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 304 KG-----ER---VGVL----A--GHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cc-----ce---EEEe----e--ccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 21 11 1112 2 5999999999999999999999999999995
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=318.75 Aligned_cols=203 Identities=21% Similarity=0.255 Sum_probs=176.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|+.++.||.|+||.|.+++++ .+|..+|+|++++.+.......+... +|..+|+.+.||++++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~ 108 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVK 108 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEE
Confidence 3679999999999999999999962 45789999999887666555555553 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.|.+.+++||||||.+| .|..+++ +.+++++..+++|+.||+.||+|||+++|++|||||||||||.+| ++|
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iK 184 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIK 184 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEE
Confidence 99999999999999999995 9999999 568899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+|||+|+...+. ..+-| |||.|+|||++...+|+.++|+|+.|.+. ||++.+..+|...+
T Consensus 185 itDFGFAK~v~~r-------------T~TlC-GTPeYLAPEii~sk~ynkavDWWalGVLI-YEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR-------------TWTLC-GTPEYLAPEIIQSKGYNKAVDWWALGVLI-YEMLAGYPPFYDDN 245 (355)
T ss_pred EEeccceEEecCc-------------EEEec-CCccccChHHhhcCCCCcchhHHHHHHHH-HHHHcCCCCCcCCC
Confidence 9999999954321 12233 59999999999999999999999999665 77776666654433
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=295.06 Aligned_cols=282 Identities=19% Similarity=0.301 Sum_probs=230.7
Q ss_pred cccccccCCCceecc--CCCCCCCCCCeEEEEcCCCCEEEEeCC------CceeEEeecccCcEEEEEEccCCCEEEEec
Q 000355 1217 ATSNLMKCEPWFWFP--TPAASWDGPDFLGRVGGLKDESPWKIK------ASILSSIRAHHGALRSVAVGQDECTVFTAG 1288 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~~--Spdg~~~~~~~lasgS~D~~i~lWd~~------g~~l~tl~gH~~~V~svafspdg~~LaSgs 1288 (1620)
-..++.||++||... .+.+ .+.+.++|.|+++.+|++. |..++.++||+..|..++.++||++.+|||
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~----~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKN----SDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCC----CceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 356889999999973 3332 3459999999999999976 668999999999999999999999999999
Q ss_pred cCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1289 IGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1289 ~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
. |+++|+||+.+|++.+.|.||+..|.+|+|++++++++ |.|+||++||+. |.|..+.....
T Consensus 83 w----D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~----------- 146 (315)
T KOG0279|consen 83 W----DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS----------- 146 (315)
T ss_pred c----cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC-----------
Confidence 5 99999999999999999999999999999999999994 559999999986 55655554321
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecC--CCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC--VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~d--g~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
+ .+.|+|+.|+|+ ...|++++.|++||+||+++-+..+.+.+|. .
T Consensus 147 -----------------~----------~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~------~ 193 (315)
T KOG0279|consen 147 -----------------H----------REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHS------G 193 (315)
T ss_pred -----------------C----------cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccccc------c
Confidence 0 234677777776 6789999999999999999988887777654 4
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEE
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWD 1523 (1620)
.++.++++ |||...++|+.||.+.+||++.++.+..+. |...|++++ +|+.-.|+ ...+..|+|||
T Consensus 194 ~v~t~~vS-----------pDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~-~at~~sIkIwd 260 (315)
T KOG0279|consen 194 YVNTVTVS-----------PDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLC-AATATSIKIWD 260 (315)
T ss_pred cEEEEEEC-----------CCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEe-eccCCceEEEe
Confidence 57888875 788899999999999999999999988877 789999999 87765544 44566799999
Q ss_pred CCCCCCCCCeEee----cCC---CCEE----EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1524 LRRNWPSQPTVFK----GHT---NGIS----GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1524 l~~~~~~~~~~l~----gH~---~~V~----afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+.+. ..+.+++ |.+ +.+. +|+.||+.|++|-.|+ |++|.+.
T Consensus 261 l~~~--~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 261 LESK--AVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccch--hhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 9987 3333332 221 1222 4999999999998877 9999875
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=331.79 Aligned_cols=148 Identities=22% Similarity=0.271 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..||+|.++..... .....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccC-CcchhHH--------HHHHHHHhCCCCCEeeE
Confidence 678999999999999999999862 35789999998754222 1122233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999999874 234578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 DfG~~~ 151 (288)
T cd07871 146 DFGLAR 151 (288)
T ss_pred cCccee
Confidence 999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=339.37 Aligned_cols=169 Identities=17% Similarity=0.142 Sum_probs=144.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|...++||+|+-|.||.|+. ..+++.||||++...+... ++.+ ++|+.+|+..+|+|||.+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~------~~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARK------ISTKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVNF 335 (550)
T ss_pred hhhhcchhhhccccccceeeeee------ccCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHHH
Confidence 44789999999999999999986 2457889999998754433 2333 599999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.|...+.+|+|||||+| +|.+++. ...++|.++..|++++++||+|||.+||||||||.+|||++.+| .+||
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKl 410 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKL 410 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEE
Confidence 9999999999999999995 9999997 44589999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+|||++........ ......|||+|||||++
T Consensus 411 tDFGFcaqi~~~~~-----------KR~TmVGTPYWMAPEVv 441 (550)
T KOG0578|consen 411 TDFGFCAQISEEQS-----------KRSTMVGTPYWMAPEVV 441 (550)
T ss_pred eeeeeeeccccccC-----------ccccccCCCCccchhhh
Confidence 99999985432211 12334589999999986
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=329.47 Aligned_cols=185 Identities=19% Similarity=0.163 Sum_probs=138.6
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCC------CcHhHHHhhcc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGV------PSFDESSVPGC 173 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~------~~~~Ei~iL~~ 173 (1620)
....++|++++.||+|.||+|-+|++ ..+++.||||++.+.+...+... .+...+ ...+||.||++
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~------~~~~~l~AiKil~K~~~~~~~~~--~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARD------EVDGKLYAIKILPKKELRRQYGF--PRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEee------cCCCcEEEEEeechhhhhhhccc--ccccccccCcHHHHHHHHHHHHh
Confidence 34467999999999999999999997 35689999999987543322110 000000 12489999999
Q ss_pred CCcccccceeeEEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 174 LRHPNVAPVLGLLKTS--GLITSVIPKTP-YTLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 174 l~HpNIv~l~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~-l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
|+|||||+|+++..+. +++|||+|||. |.+...= .... +++.++|.|+++++.||+|||.+|||||||||+|+
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 9999999999999876 48999999998 4443322 3444 89999999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
||+++| ++||+|||.+-....... .....+.....|||.|||||..
T Consensus 242 Ll~~~g--~VKIsDFGVs~~~~~~~~------~~~d~~L~~tvGTPAF~APE~c 287 (576)
T KOG0585|consen 242 LLSSDG--TVKISDFGVSNEFPQGSD------EGSDDQLSRTVGTPAFFAPELC 287 (576)
T ss_pred EEcCCC--cEEeeccceeeecccCCc------cccHHHHhhcCCCccccchHhh
Confidence 999999 999999999874321100 0000111224577777877764
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=331.00 Aligned_cols=148 Identities=22% Similarity=0.272 Sum_probs=129.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|++....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 578999999999999999999972 357899999987543221 112223 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 345688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 Dfg~~~ 151 (303)
T cd07869 146 DFGLAR 151 (303)
T ss_pred CCCcce
Confidence 999987
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=291.57 Aligned_cols=293 Identities=17% Similarity=0.233 Sum_probs=239.6
Q ss_pred eeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCC-----CCeEEEEEecCCcceeEEEEeeCCCeE--EE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-----RINCVSGYYGHEEVVNDICVLSSSGRI--AS 1332 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~-----tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS 1332 (1620)
+..+++||++.|+.++..+.+ +.+++++. |+++.+|++. .|..++.|+||+..|+.+..++++++. +|
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 457899999999999998874 78888887 9999999874 567899999999999999999999987 66
Q ss_pred eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1333 CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1333 ~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
.|+++++||+.+|+..+.|.+|..+ |.++++++|+..+++
T Consensus 83 wD~~lrlWDl~~g~~t~~f~GH~~d----------------------------------------Vlsva~s~dn~qivS 122 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTRRFVGHTKD----------------------------------------VLSVAFSTDNRQIVS 122 (315)
T ss_pred ccceEEEEEecCCcEEEEEEecCCc----------------------------------------eEEEEecCCCceeec
Confidence 7999999999999999999887533 677788888999999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|+.|++|++||... .+..+...+. +..+|+|++|+|... ..+|++++.|++|++||+++.+....+
T Consensus 123 GSrDkTiklwnt~g-~ck~t~~~~~----~~~WVscvrfsP~~~---------~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 123 GSRDKTIKLWNTLG-VCKYTIHEDS----HREWVSCVRFSPNES---------NPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCcceeeeeeecc-cEEEEEecCC----CcCcEEEEEEcCCCC---------CcEEEEccCCceEEEEccCCcchhhcc
Confidence 99999999999864 4544444322 267899999987542 358999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCceEEEeccCCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSA 1569 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~ 1569 (1620)
.||.+.|+.++ +|||.+++||+.||.+.+||++.+ +.++++ +|...|. +|+|+.-.|+.+.+..|++||++...
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~--k~lysl-~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG--KNLYSL-EAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEccCC--ceeEec-cCCCeEeeEEecCCceeEeeccCCceEEEeccchh
Confidence 99999999999 999999999999999999999998 455554 5778888 49999989988888889999987322
Q ss_pred CCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1570 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1570 ~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
-.+.-. .+.... ......-...+++|++||..|.+|-.||.|++|
T Consensus 266 ~v~~l~----~d~~g~-s~~~~~~~clslaws~dG~tLf~g~td~~irv~ 310 (315)
T KOG0279|consen 266 VVEELK----LDGIGP-SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVW 310 (315)
T ss_pred hhhhcc----cccccc-ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEE
Confidence 111000 000000 000122346789999999999999999999999
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=309.85 Aligned_cols=290 Identities=18% Similarity=0.279 Sum_probs=253.8
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
.+.+.||...|+. |.|+-.. ++++|.|.++++||.. |++...|+||+++|.+|+|+..|++++++|. |
T Consensus 101 ~~~l~g~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----D 171 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----D 171 (406)
T ss_pred hhhhhccccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----c
Confidence 3456678888886 7777765 9999999999999988 8899999999999999999999999999998 7
Q ss_pred cEEEEEeCCC-CeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccc
Q 000355 1295 GTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371 (1620)
Q Consensus 1295 gtVrLWdl~t-g~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1371 (1620)
-.+++||..+ .+|++.+.||+..|.+|+|.|-|.++.|| |.+|+.|++.+|-|+.++.+|.
T Consensus 172 l~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~---------------- 235 (406)
T KOG0295|consen 172 LSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS---------------- 235 (406)
T ss_pred cchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCch----------------
Confidence 8899999987 67888999999999999999999999766 9999999999999999998763
Q ss_pred cccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEee
Q 000355 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1451 (1620)
Q Consensus 1372 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1451 (1620)
.+|..++++.||..+++|+.|.+|++|-+.++++...++.|.. .|.+++|
T Consensus 236 ------------------------ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh------~vEci~w 285 (406)
T KOG0295|consen 236 ------------------------EWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH------PVECIAW 285 (406)
T ss_pred ------------------------HhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcccc------ceEEEEe
Confidence 2466677778899999999999999999999998888887654 3788888
Q ss_pred eCCCccccC----cccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1452 CGSEKMQAG----GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1452 ~~~~~~~~~----g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
.+....+.. +-...+.++++|+.|++|++||+.+|.++.++.||.++|..++ +|.|++|+|+.+|+++++||+++
T Consensus 286 ap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 286 APESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred cccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 766543221 1112346999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1527 NWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
. ++..++..|..-|++ |.-+..+++||+-|. +++|.
T Consensus 366 ~--~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 366 L--QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred c--eeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 8 778889999998886 666778999999988 99996
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=334.41 Aligned_cols=175 Identities=20% Similarity=0.209 Sum_probs=146.6
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNI 179 (1620)
.....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.+.......+.++ +|+++|+.+. ||||
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpni 98 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNI 98 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCE
Confidence 34668999999999999999999973 35899999999886655433333343 9999999998 9999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc--
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-- 256 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-- 256 (1620)
|.++++|++.+.+++|||+|. |+|.+.|... .+++.++..+++|++.|+.|||+.||+||||||+|+|+.....
T Consensus 99 v~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 99 VQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred EEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence 999999999999999999999 4999999854 3999999999999999999999999999999999999976532
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
..+|++|||+|+.... +.......||+.|+|||++
T Consensus 176 ~~ik~~DFGla~~~~~------------~~~~~~~~Gtp~y~APEvl 210 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKP------------GERLHTIVGTPEYVAPEVL 210 (382)
T ss_pred CcEEEeeCCCceEccC------------CceEeeecCCccccCchhh
Confidence 3799999999995432 1123344578999999886
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=334.82 Aligned_cols=147 Identities=23% Similarity=0.345 Sum_probs=126.8
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. .++..||||.+...........++. +|+++|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5899999999999999999962 4678999999875322223333344 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+|||||+++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 986543 589999999999999997 345689999999999999999999999999999999999999999 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999983
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=314.06 Aligned_cols=177 Identities=18% Similarity=0.205 Sum_probs=145.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNV 179 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNI 179 (1620)
-.+|+..+.||+|..++|.+|.++ ++|..+|+|++....... +...+.++ ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 457888999999999999988762 567889999987532221 11222221 234899999998 69999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++.++|+++..+++|+|.|+ |.|++++. ..-.++|.+.+.||+|++.|+.|||.++|+||||||+|||++++. +
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 89999998 567899999999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
+||+|||+|.......+ .....|||.|.|||.+..
T Consensus 162 i~isDFGFa~~l~~Gek------------LrelCGTPgYLAPEtikC 196 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEK------------LRELCGTPGYLAPETIKC 196 (411)
T ss_pred eEEeccceeeccCCchh------------HHHhcCCCcccChhheee
Confidence 99999999996532221 112236999999998753
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=317.87 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=151.6
Q ss_pred cccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcc
Q 000355 98 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 177 (1620)
Q Consensus 98 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp 177 (1620)
.+....++|++..+||.|.-++||+|+. ...+..||||++..++.... . +.++ +|++.|+.++||
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c------~p~~e~VAIK~inLEkc~~~-l-d~l~-------kE~~~msl~~HP 84 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARC------IPTNEVVAIKIINLEKCNND-L-DALR-------KEVQTMSLIDHP 84 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeee------cccCCEEEEEEeehhhhhhh-H-HHHH-------HHHHHhhhcCCC
Confidence 3444577999999999999999999985 35679999999987655443 3 3333 999999999999
Q ss_pred cccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
||++++..|..+..+|+||+||. |++.++++..-...+.|..+..|++++++||.|||.+|.||||||+.||||+.+|
T Consensus 85 NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG- 163 (516)
T KOG0582|consen 85 NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG- 163 (516)
T ss_pred CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC-
Confidence 99999999999999999999999 6999999975556689999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.|||+|||.+....... .+.........||+.|||||++
T Consensus 164 -~VkLadFgvsa~l~~~G-------~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -TVKLADFGVSASLFDSG-------DRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -cEEEcCceeeeeecccC-------ceeeEeeccccCcccccChHHh
Confidence 89999999887543221 1111111455678888888875
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=328.56 Aligned_cols=360 Identities=21% Similarity=0.264 Sum_probs=264.3
Q ss_pred CCCcee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCC--EEEEeccCCCCCcEEE
Q 000355 1224 CEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGTVQ 1298 (1620)
Q Consensus 1224 H~~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~--~LaSgs~d~~~DgtVr 1298 (1620)
|+..|. +|+|.|.. +++||.|+.+++||+. +.+.+.|+||.+.|.++.|+|+.. .|++|+. |++|+
T Consensus 104 He~Pvi~ma~~~~g~L-----lAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~----D~~v~ 174 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTL-----LATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT----DGTVR 174 (775)
T ss_pred cCCCeEEEEEcCCCce-----EEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCC----CceEE
Confidence 888776 48888865 9999999999999999 789999999999999999999874 5788886 99999
Q ss_pred EEeCCCC-eEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEecc----------C----------
Q 000355 1299 KWELTRI-NCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQ----------S---------- 1355 (1620)
Q Consensus 1299 LWdl~tg-~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~----------~---------- 1355 (1620)
+||+.+. .|+.++.+|...|++++|.+++..+ ++.|..+.|||+.+-++..++..- .
T Consensus 175 vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~ 254 (775)
T KOG0319|consen 175 VWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYII 254 (775)
T ss_pred EEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEE
Confidence 9999854 4688899999999999999998877 455999999998755443332210 0
Q ss_pred -----Ccccc----------c-cCC-C-------------CCcccccccccccc---------cccCCCCCeEEEeecC-
Q 000355 1356 -----MDSLH----------G-GSP-S-------------SSISKINTDQVGML---------NSNTLSSGILSTAFDG- 1395 (1620)
Q Consensus 1356 -----~~~~~----------~-~s~-s-------------~~~~~~~~~~~~~~---------~~~~~s~~v~sv~f~~- 1395 (1620)
+.... . ..+ + ....+........+ ...+..+.|.++.|-+
T Consensus 255 TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~ 334 (775)
T KOG0319|consen 255 TAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGP 334 (775)
T ss_pred EecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCC
Confidence 00000 0 000 0 00000000000001 0012223333333322
Q ss_pred -------------------------------CceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1396 -------------------------------NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1396 -------------------------------~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
..|.++....+|..+++|+.|+++++|.+..+........ ...+|.+
T Consensus 335 e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a--~~~gH~~ 412 (775)
T KOG0319|consen 335 EESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVA--QANGHTN 412 (775)
T ss_pred ccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhh--hhccccc
Confidence 1234455556778999999999999998855433221111 1124666
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-----EE----EEEEccCCcEEEEE-eCCCCEEEEEe
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VI----ASWRAHDGYVTKLA-APEDHLLVSSS 1514 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-----~i----~~l~gH~~~V~sva-spdg~~LaSgS 1514 (1620)
.|.+|+++.... .+++++|.|+++++|++...+ .+ .+...|+..|++|+ +|+.++++|||
T Consensus 413 svgava~~~~~a----------sffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~S 482 (775)
T KOG0319|consen 413 SVGAVAGSKLGA----------SFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGS 482 (775)
T ss_pred ccceeeecccCc----------cEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecc
Confidence 788999854322 699999999999999998621 11 13358999999999 99999999999
Q ss_pred CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCc
Q 000355 1515 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1591 (1620)
Q Consensus 1515 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1591 (1620)
.|++.+||++.+. ....++.||+.+|.| |++..+.++|+|.|+ |++|.++ +..+ .+.++ ||
T Consensus 483 qDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is-----~fSC----lkT~e-----GH 546 (775)
T KOG0319|consen 483 QDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS-----TFSC----LKTFE-----GH 546 (775)
T ss_pred cccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec-----ccee----eeeec-----Cc
Confidence 9999999999966 677899999999997 999999999999999 9999997 2222 23332 69
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1592 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1592 ~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+.|..+.|-.+|+.|++|+.||.||||+
T Consensus 547 ~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 547 TSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 99999999999999999999999999996
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=327.33 Aligned_cols=149 Identities=17% Similarity=0.185 Sum_probs=128.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.+...........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 47899999999999999999962 35789999998653222211222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 99999999999999998 49999998 355789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 144 Dfg~~~~ 150 (291)
T cd05612 144 DFGFAKK 150 (291)
T ss_pred ecCcchh
Confidence 9999883
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=332.03 Aligned_cols=142 Identities=21% Similarity=0.198 Sum_probs=123.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++........ ....++ +|+++|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999999862 4678999999875432221 222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999995 9999987 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 143 ~~ 144 (323)
T cd05571 143 KE 144 (323)
T ss_pred cc
Confidence 73
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=342.91 Aligned_cols=146 Identities=21% Similarity=0.252 Sum_probs=123.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|.+. .+++.||||++..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 458999999999999999999862 4578999998864321 111 79999999999999999
Q ss_pred eeEEEeC--------CEEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 183 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~~~~~--------~~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
+++|... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9987543 25789999999999888763 2356789999999999999999999999999999999999998
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++. .+||+|||+|+.
T Consensus 205 ~~~~-~vkL~DFGla~~ 220 (440)
T PTZ00036 205 PNTH-TLKLCDFGSAKN 220 (440)
T ss_pred CCCC-ceeeeccccchh
Confidence 6652 699999999984
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=330.79 Aligned_cols=149 Identities=16% Similarity=0.139 Sum_probs=130.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+........ ....+. +|+.+|+.++||||++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCCc
Confidence 678999999999999999999862 3578999999875432221 122233 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~k 158 (329)
T PTZ00263 83 MMCSFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVK 158 (329)
T ss_pred EEEEEEcCCEEEEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEE
Confidence 99999999999999999985 9999998 356789999999999999999999999999999999999999999 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 159 l~Dfg~~~~ 167 (329)
T PTZ00263 159 VTDFGFAKK 167 (329)
T ss_pred EeeccCceE
Confidence 999999983
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=282.53 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=227.8
Q ss_pred CeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcc
Q 000355 1241 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEV 1317 (1620)
Q Consensus 1241 ~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~ 1317 (1620)
-+|+|+|.|.+||+|.+. |.|.++++.-.+.|+.+...||++.||+|+. ..||++|+.+++ ++.+|.+|++.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKN 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCc
Confidence 459999999999999988 9999999977888999999999999999995 899999998875 58999999999
Q ss_pred eeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecC
Q 000355 1318 VNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1395 (1620)
Q Consensus 1318 V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~ 1395 (1620)
|++|.|..+|+.+ +|.||++||||++.-.+.+.++..
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~----------------------------------------- 124 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN----------------------------------------- 124 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-----------------------------------------
Confidence 9999999999988 455999999999987666655422
Q ss_pred CceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecC
Q 000355 1396 NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1475 (1620)
Q Consensus 1396 ~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~D 1475 (1620)
..|+++..+|+...+++|..+|.|++||+++..+.+.+-.... ..|+++... |+|+.++++...
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~-----~~i~sl~v~-----------~dgsml~a~nnk 188 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD-----TSIQSLTVM-----------PDGSMLAAANNK 188 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCC-----cceeeEEEc-----------CCCcEEEEecCC
Confidence 2367788888899999999999999999998877766653322 236666653 788999999999
Q ss_pred CcEEEEECCCC------cEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEe
Q 000355 1476 GQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS 1546 (1620)
Q Consensus 1476 g~I~lwD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afS 1546 (1620)
|.+++|++-++ +++.++++|.+.+..+. +||+++||++|.|++++||+..+. .+....++||...|. +||
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeec
Confidence 99999998764 36777899999999888 999999999999999999999886 345568899999999 399
Q ss_pred ecCCEEEEEeCCc-eEEEecc
Q 000355 1547 VWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1547 pdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.||++|++|+.|+ +++|+++
T Consensus 268 ~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 268 ADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred cCccEEEecCCCCceeecccc
Confidence 9999999999999 9999987
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=329.87 Aligned_cols=151 Identities=19% Similarity=0.185 Sum_probs=129.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
..++|++.+.||+|+||.||+|.+.. ..+..||+|.+......... ...+. +|+.+++.++||||+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~Iv 94 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKN-----EDFPPVAIKRFEKSKIIKQKQVDHVF--------SERKILNYINHPFCV 94 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEEC-----CCCeEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhCCCCCCc
Confidence 36689999999999999999998521 23468999998654332222 22233 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++.+.+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 95 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~i 170 (340)
T PTZ00426 95 NLYGSFKDESYLYLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FI 170 (340)
T ss_pred ceEEEEEeCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CE
Confidence 99999999999999999998 59999998 356789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 171 kL~DFG~a~~ 180 (340)
T PTZ00426 171 KMTDFGFAKV 180 (340)
T ss_pred EEecCCCCee
Confidence 9999999984
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=322.68 Aligned_cols=151 Identities=22% Similarity=0.244 Sum_probs=124.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Cccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv 180 (1620)
.+|++++.||+|+||+||+|++.. ..+..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv 67 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVV 67 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC-----CCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcc
Confidence 379999999999999999998622 2467899999876433322222333 666666555 799999
Q ss_pred ceeeEEEe-----CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 181 PVLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 181 ~l~~~~~~-----~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
++++++.. ...+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 68 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred eEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 99999863 3579999999999999999865556689999999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+++.
T Consensus 148 --~~kl~Dfg~~~~ 159 (290)
T cd07862 148 --QIKLADFGLARI 159 (290)
T ss_pred --CEEEccccceEe
Confidence 899999999973
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=320.83 Aligned_cols=149 Identities=18% Similarity=0.262 Sum_probs=127.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.+|+|++............+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchh
Confidence 47999999999999999999972 3578899999876533332223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++.+|+||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~D 143 (287)
T cd07848 67 EAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCD 143 (287)
T ss_pred hhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEee
Confidence 99999999999999999866666653 245689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000355 264 KPLVGF 269 (1620)
Q Consensus 264 FGla~~ 269 (1620)
||+++.
T Consensus 144 fg~~~~ 149 (287)
T cd07848 144 FGFARN 149 (287)
T ss_pred ccCccc
Confidence 999983
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=301.51 Aligned_cols=377 Identities=16% Similarity=0.151 Sum_probs=281.1
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.+.||+..|++ |-|.-.+ -++|||.|++|.+|+-. -+.-.+++.|+.-|+||+|+|||++++|+|. ||+
T Consensus 142 ei~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----Ccc
Confidence 36789999986 4444433 29999999999999855 5567788999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEe---cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCc----cccccCCCCC
Q 000355 1297 VQKWELTRINCVSGYY---GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD----SLHGGSPSSS 1367 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~---gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~----~~~~~s~s~~ 1367 (1620)
|.+||-.+|+.+..+. +|++.|.+++|+|++.++ +|+|.++||||+.++++++++...... ....+..+.-
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l 293 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL 293 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE
Confidence 9999999999999998 899999999999999998 566999999999999999998765431 1111111111
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-----------eeCC
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------WRGE 1436 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-----------l~~~ 1436 (1620)
+++...+..+.++....+ ....+.=+.+.++++..++++++|++|+.||.|.-||..+|..-+. +..+
T Consensus 294 ItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~ 372 (603)
T KOG0318|consen 294 ITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAAS 372 (603)
T ss_pred EEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeec
Confidence 222222333444443333 3344444566799999999999999999999999999987743211 1111
Q ss_pred C-c---c----------------------cccCCccceEeeeCCCc---------------------------cccCccc
Q 000355 1437 P-T---E----------------------LGFPSLVSAICACGSEK---------------------------MQAGGAV 1463 (1620)
Q Consensus 1437 ~-~---~----------------------v~~~~~V~sva~~~~~~---------------------------~~~~g~~ 1463 (1620)
. . . +.......++|...... -++...+
T Consensus 373 ~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~ 452 (603)
T KOG0318|consen 373 ESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVS 452 (603)
T ss_pred CCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEc
Confidence 1 0 0 00111112222222110 0223457
Q ss_pred CCCCEEEEEecCCcEEEEECCCCcE--EEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~~--i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1540 (1620)
|+++.+|.|+.||.|++|.+..++. ......|.++|++|+ +||+.+||+|...+.|.+||+.+... ....+.-|+.
T Consensus 453 ~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHta 531 (603)
T KOG0318|consen 453 PDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KTNRWAFHTA 531 (603)
T ss_pred CCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ecceeeeeee
Confidence 8999999999999999999986553 334557999999999 99999999999999999999998753 4456666999
Q ss_pred CEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEE
Q 000355 1541 GISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1617 (1620)
Q Consensus 1541 ~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Ir 1617 (1620)
.|.| |+|+.+++||||-|. |.||++.++.+ .... .+ .|...|+.+.|. |...+++.|.|-.||
T Consensus 532 kI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~-----------~i~i-kn-AH~~gVn~v~wl-de~tvvSsG~Da~iK 597 (603)
T KOG0318|consen 532 KINCVAWSPNNKLVATGSLDTNVIIYSVKKPAK-----------HIII-KN-AHLGGVNSVAWL-DESTVVSSGQDANIK 597 (603)
T ss_pred eEEEEEeCCCceEEEeccccceEEEEEccChhh-----------heEe-cc-ccccCceeEEEe-cCceEEeccCcceeE
Confidence 9995 999999999999999 99999985432 1111 12 477779999998 556788999999999
Q ss_pred EcC
Q 000355 1618 LCC 1620 (1620)
Q Consensus 1618 lWd 1620 (1620)
+|.
T Consensus 598 ~W~ 600 (603)
T KOG0318|consen 598 VWN 600 (603)
T ss_pred Eec
Confidence 995
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=296.49 Aligned_cols=294 Identities=21% Similarity=0.336 Sum_probs=246.6
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe-
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC- 1333 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~- 1333 (1620)
|...-+..+.+.||.+.|+||++.|-+++++|||. |++|+|||+.+|+...++.||...|..|++++...++.|+
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec
Confidence 44444567889999999999999999999999998 9999999999999999999999999999999999999555
Q ss_pred -CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1334 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1334 -DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
|+.|+.||+...+.++.+.+|-. .|.|++.+|.-+.+++
T Consensus 213 edk~VKCwDLe~nkvIR~YhGHlS----------------------------------------~V~~L~lhPTldvl~t 252 (460)
T KOG0285|consen 213 EDKQVKCWDLEYNKVIRHYHGHLS----------------------------------------GVYCLDLHPTLDVLVT 252 (460)
T ss_pred CCCeeEEEechhhhhHHHhccccc----------------------------------------eeEEEeccccceeEEe
Confidence 99999999999999988877631 2667777777889999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|+.|.++|+||+++...++.+.||... |.+|.+.+.+ ..+++||.|++|++||++.|+.+.++
T Consensus 253 ~grDst~RvWDiRtr~~V~~l~GH~~~------V~~V~~~~~d-----------pqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 253 GGRDSTIRVWDIRTRASVHVLSGHTNP------VASVMCQPTD-----------PQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred cCCcceEEEeeecccceEEEecCCCCc------ceeEEeecCC-----------CceEEecCCceEEEeeeccCceeEee
Confidence 999999999999999999999987664 5666654322 36999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeec-CCEEEEEeCCc-eEEEeccCCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW-GQDVISISNNK-IGLSSLSKSA 1569 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpd-g~~LaSgs~D~-I~vwdl~~~~ 1569 (1620)
..|...|++++ +|....+||+|.| .|+.|++..+ ..+..+.+|+..|++++-+ ...+++|++++ +..||.....
T Consensus 316 t~hkksvral~lhP~e~~fASas~d-nik~w~~p~g--~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 316 THHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG--EFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred ecccceeeEEecCCchhhhhccCCc-cceeccCCcc--chhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCc
Confidence 99999999999 9999999999988 5999999988 5566799999999986665 45778899999 9999986321
Q ss_pred CCC-CcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1570 DED-GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1570 ~~~-g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
..+ ++..+.+..+ .....|.+.+|...|..|++|..|.+|++|
T Consensus 393 nyQ~~~t~vqpGSl-------~sEagI~as~fDktg~rlit~eadKtIk~~ 436 (460)
T KOG0285|consen 393 NYQRGQTIVQPGSL-------ESEAGIFASCFDKTGSRLITGEADKTIKMY 436 (460)
T ss_pred ccccccccccCCcc-------ccccceeEEeecccCceEEeccCCcceEEE
Confidence 111 1111111111 234569999999999999999999999998
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=334.34 Aligned_cols=183 Identities=14% Similarity=0.134 Sum_probs=149.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|.+. .+++.||+|..... .+. +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 457999999999999999999972 45788999975321 122 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|..+...++|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 999999999999999999999999873 45688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+|+........ ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 225 DFG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 273 (391)
T PHA03212 225 DFGAACFPVDINAN----------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVL 273 (391)
T ss_pred eCCccccccccccc----------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHH
Confidence 99999742111000 01122367788888877766667777777777554
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=320.06 Aligned_cols=149 Identities=15% Similarity=0.076 Sum_probs=128.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||+||+|.+ ..+++.||+|.+......... ...+. +|+++++.++|+||++++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~------~~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~ 66 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQV------RATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCEEEEEEEE------ecCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEE
Confidence 378899999999999999986 246789999998764332222 12233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+++||||++ |+|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~ 144 (285)
T cd05631 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRIS 144 (285)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 5998888654455689999999999999999999999999999999999999988 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05631 145 DLGLAVQ 151 (285)
T ss_pred eCCCcEE
Confidence 9999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=290.88 Aligned_cols=324 Identities=16% Similarity=0.205 Sum_probs=269.3
Q ss_pred hhcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1215 QEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1215 ~~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
....+++.+|++.|++ .+|+..| +||||.|....+|++. |.....+.||.++|.++.||.||.+||||+.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm-- 126 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM-- 126 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC--
Confidence 4557889999999997 6787777 9999999999999998 8899999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
+|.|+||...++.....+.+--+.+.-+.|+|.+..+ ++.||.|..|.+.++...+.+.+|...
T Consensus 127 --sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~------------ 192 (399)
T KOG0296|consen 127 --SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP------------ 192 (399)
T ss_pred --CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC------------
Confidence 8999999999999988887677888899999988877 455999999999988777788776422
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceE
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sv 1449 (1620)
++|=.+.|+|+.+++|..||+|++||+.+|++++...+.... .-.++
T Consensus 193 ----------------------------ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~-----~~~~~ 239 (399)
T KOG0296|consen 193 ----------------------------CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL-----ELPCI 239 (399)
T ss_pred ----------------------------cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccC-----cCCcc
Confidence 566678889999999999999999999999999988754422 12222
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE--------ccCCcEEEEE-e---CCCCEEEEEeCCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--------AHDGYVTKLA-A---PEDHLLVSSSLDK 1517 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~--------gH~~~V~sva-s---pdg~~LaSgS~Dg 1517 (1620)
. ....+..+.+|+.++.+++-...+|+.+.... .+...+.+|. . ..=.+.|+|+.||
T Consensus 240 ~-----------~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 240 S-----------LNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred c-----------cccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 2 23456789999999999999999999888776 4666667776 2 3345889999999
Q ss_pred cEEEEECCCCCCCCCeEeecCCCCEEEEeecC-CEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccE
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVL 1595 (1620)
Q Consensus 1518 tI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V 1595 (1620)
+|.|||+.... +...-.|..+|..+-..+ .+|++++.|+ |+.||.+ .|+....+. +|...|
T Consensus 309 ~i~iyD~a~~~---~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaR-----tG~l~~~y~---------GH~~~I 371 (399)
T KOG0296|consen 309 TIAIYDLAAST---LRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDAR-----TGQLKFTYT---------GHQMGI 371 (399)
T ss_pred eEEEEecccch---hheeccCCCceEEEEEcCcchheeeccCceEEeeecc-----ccceEEEEe---------cCchhe
Confidence 99999998853 234456888999755555 8899999999 9999965 566533222 599999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1596 SSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1596 ~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+++++|+.++++|+|+|++.+||+
T Consensus 372 l~f~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 372 LDFALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred eEEEEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999999985
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=299.62 Aligned_cols=289 Identities=19% Similarity=0.302 Sum_probs=251.2
Q ss_pred EEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe
Q 000355 1254 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1333 (1620)
Q Consensus 1254 lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~ 1333 (1620)
.|=..-...+.+.||..+|+.+-|+|+...+++++. |++|++||..||++...++||++.|.+|+|+..|..+++|
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~----d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASE----DATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecC----CceEEEEEccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 354445678889999999999999999999999998 8999999999999999999999999999999999999776
Q ss_pred --CCcEEEEeCCC-CceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEE
Q 000355 1334 --DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1410 (1620)
Q Consensus 1334 --DgtV~IWD~~t-g~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~l 1410 (1620)
|-.+++||..+ -+|++.+.+|. ..|.++.+.|.|+++
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~----------------------------------------h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHE----------------------------------------HGVSSVFFLPLGDHI 208 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcc----------------------------------------cceeeEEEEecCCee
Confidence 87899999875 45555555442 236777888889999
Q ss_pred EEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEE
Q 000355 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490 (1620)
Q Consensus 1411 asgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~ 1490 (1620)
++++.|.+|+.||+.+|-+++++.+|. .+|+.+... .||.++|+++.|.+|++|-+.++++..
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~~h~------ewvr~v~v~-----------~DGti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFPGHS------EWVRMVRVN-----------QDGTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccceeEEeccCch------HhEEEEEec-----------CCeeEEEecCCCceEEEEEeccchhhh
Confidence 999999999999999999999999754 468888764 567899999999999999999999999
Q ss_pred EEEccCCcEEEEE-eCC---------------CCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEE
Q 000355 1491 SWRAHDGYVTKLA-APE---------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDV 1552 (1620)
Q Consensus 1491 ~l~gH~~~V~sva-spd---------------g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~L 1552 (1620)
.++.|..+|-+++ .|. +++++++|.|++|++||+.++ .++.++.||.++|. +|+|.|++|
T Consensus 272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEE
Confidence 9999999999888 331 259999999999999999999 88999999999999 499999999
Q ss_pred EEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1553 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1553 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+|+.+|+ +++||+. .+++. +.+. .|...|++++|+-+..+++||+-|.++++|
T Consensus 350 ~ScaDDktlrvwdl~-----~~~cm----k~~~-----ah~hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLK-----NLQCM----KTLE-----AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred EEEecCCcEEEEEec-----cceee----eccC-----CCcceeEEEecCCCCceEEeccccceeeee
Confidence 9999999 9999986 33331 2222 477889999999999999999999999999
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=297.91 Aligned_cols=331 Identities=18% Similarity=0.265 Sum_probs=254.9
Q ss_pred ccccCCCcccccccccccchhhhhhcccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCc
Q 000355 1192 SRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGA 1271 (1620)
Q Consensus 1192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~ 1271 (1620)
.....+.|..+.+.++|+....-........-|.|||.++-..+.| |.||++||++++||.+|++..++.||+++
T Consensus 72 e~l~~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ 146 (423)
T KOG0313|consen 72 EHLEEKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGP 146 (423)
T ss_pred HHHHHcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcc
Confidence 3344566777888888888766666666777899999986555777 99999999999999999999999999999
Q ss_pred EEEEEEccCCC---EEEEeccCCCCCcEEEEEeCCCCeE----EEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeC
Q 000355 1272 LRSVAVGQDEC---TVFTAGIGPGFKGTVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1342 (1620)
Q Consensus 1272 V~svafspdg~---~LaSgs~d~~~DgtVrLWdl~tg~~----l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~ 1342 (1620)
|.+++|.-.+. .+++||. |.++++|..+.++. ++.-+||...|.+|+..+++.++ +|.|.+++||+.
T Consensus 147 ik~v~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~ 222 (423)
T KOG0313|consen 147 IKSVAWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSV 222 (423)
T ss_pred eeeeEEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeeccc
Confidence 99999865443 5999998 89999999877643 33445999999999999999998 566999999993
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.+ .....+...... .......-.....+..+....+|...|.++.|.. ...+.+++.|.+|+.|
T Consensus 223 ~~-~~~~~~E~~s~~----rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-----------~~v~yS~SwDHTIk~W 286 (423)
T KOG0313|consen 223 ET-DEEDELESSSNR----RRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-----------ATVIYSVSWDHTIKVW 286 (423)
T ss_pred CC-Cccccccccchh----hhhhhhhhhcccccCceEEecccccceeeEEEcC-----------CCceEeecccceEEEE
Confidence 32 222222211100 0000000111223344555566777777666654 5688999999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc---EEEEEEccCCcE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---VIASWRAHDGYV 1499 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~---~i~~l~gH~~~V 1499 (1620)
|+.+|.++.++.+.. ..++|... +..++||+|+.|..+++||.|++. ...++.||.+.|
T Consensus 287 Dletg~~~~~~~~~k-------sl~~i~~~-----------~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV 348 (423)
T KOG0313|consen 287 DLETGGLKSTLTTNK-------SLNCISYS-----------PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV 348 (423)
T ss_pred EeecccceeeeecCc-------ceeEeecc-----------cccceeeecCCCCceeecCCCCCCCceeEEeeecchhhh
Confidence 999999887776532 25566654 445799999999999999999864 457788999999
Q ss_pred EEEE-eCCC-CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeec-CCEEEEEeCCc-eEEEecc
Q 000355 1500 TKLA-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1500 ~sva-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+|. +|.. ..|+|||.|+++++||+|+.+ ..++.+.+|.+.|.+..+. +..++||+.|+ |+++.-+
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9999 7754 588999999999999999974 4789999999999998876 45899999999 9998754
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=322.39 Aligned_cols=140 Identities=21% Similarity=0.253 Sum_probs=121.8
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||+|++. .+++.||+|.+....... .....+. +|+.+|+.++||||+++++++...+
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999999962 457889999987532222 2223333 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCccc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~ 269 (1620)
.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999995 9999997 356789999999999999999999999999999999999999999 899999999983
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.6e-32 Score=324.28 Aligned_cols=148 Identities=19% Similarity=0.227 Sum_probs=129.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++++.||+|+||.||+|++. .+++.||+|++........ ....+. +|++++..++||||+++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccE
Confidence 36999999999999999999962 3578999999976432221 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL 142 (333)
T cd05600 67 LYAFQDDEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKL 142 (333)
T ss_pred EEEEEcCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999997 456789999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~Dfg~a~~ 150 (333)
T cd05600 143 TDFGLSKG 150 (333)
T ss_pred EeCcCCcc
Confidence 99999984
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=329.23 Aligned_cols=147 Identities=27% Similarity=0.362 Sum_probs=128.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|.+. .+++.||+|++..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999999862 4678999999865322222333444 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+||||++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998876 899999999999999887 456789999999999999999999999999999999999999999 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 143 kL~Dfg~a~~ 152 (372)
T cd07853 143 KICDFGLARV 152 (372)
T ss_pred Eeccccceee
Confidence 9999999973
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=313.52 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=134.1
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
..+..-|.+.+.||+|-|++|-+|++- -+|+.||||++.+.+...-.....+ .|++.|+.++||||
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHV------FTGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpNi 79 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHV------FTGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPNI 79 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhh------cccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcCe
Confidence 345667999999999999999998874 4689999999998776654444444 89999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
|+||++..+...+|||+|+-+| ||+++|-.. ...+.|..++.|++||+.|+.|||+..||||||||+|+.+-+.. +-
T Consensus 80 VRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-Gl 157 (864)
T KOG4717|consen 80 VRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-GL 157 (864)
T ss_pred eeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-Cc
Confidence 9999999999999999999985 999999853 55679999999999999999999999999999999998775543 28
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
+||+|||++-.
T Consensus 158 VKLTDFGFSNk 168 (864)
T KOG4717|consen 158 VKLTDFGFSNK 168 (864)
T ss_pred eEeeecccccc
Confidence 99999999873
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=322.19 Aligned_cols=142 Identities=22% Similarity=0.187 Sum_probs=123.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+..... .....+. +|+++|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999999862 467899999997643222 2223333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999985 9988887 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 143 ~~ 144 (328)
T cd05593 143 KE 144 (328)
T ss_pred cc
Confidence 73
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.8e-34 Score=302.46 Aligned_cols=154 Identities=19% Similarity=0.201 Sum_probs=131.0
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.......|+...+||+|.||+||+|+.. .+++.||+|++...... ..+++++++|+++|+.|+|+|
T Consensus 12 ~~~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneK--------eGfpitalreikiL~~lkHen 77 (376)
T KOG0669|consen 12 FCDEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEK--------EGFPITALREIKILQLLKHEN 77 (376)
T ss_pred ceecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhccc--------cCCcHHHHHHHHHHHHhcchh
Confidence 3445678999999999999999999862 35677898876542211 124556789999999999999
Q ss_pred ccceeeEEEeC--------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 179 VAPVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 179 Iv~l~~~~~~~--------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
++.+++++.+. ..+|+||.+|+.||..++. .+...++..+++.++.+++.||.|+|++.|+|||+||+|+|
T Consensus 78 v~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvL 156 (376)
T KOG0669|consen 78 VVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVL 156 (376)
T ss_pred HHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEE
Confidence 99999987643 2699999999999999997 35578999999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeecCCccc
Q 000355 251 LTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 251 l~~~~~~~lKL~DFGla~~ 269 (1620)
|+.+| .+||+|||+||.
T Consensus 157 It~dg--ilklADFGlar~ 173 (376)
T KOG0669|consen 157 ITKDG--ILKLADFGLARA 173 (376)
T ss_pred EcCCc--eEEeeccccccc
Confidence 99999 999999999984
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-33 Score=315.11 Aligned_cols=205 Identities=18% Similarity=0.243 Sum_probs=176.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||+|-+|++. ..|+.||||.|++.++..+...-.++ |||+||..|+||||+++
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~I 118 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQI 118 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceeeh
Confidence 458999999999999999998863 35799999999998776654433333 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|++|+..+.+.|||||.. |+|+++|. ..+.+++.+++.+++||.+|+.|||.++|+|||||.+|||+|.++ ++||
T Consensus 119 yEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKI 194 (668)
T KOG0611|consen 119 YEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKI 194 (668)
T ss_pred hhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceee
Confidence 999999999999999998 69999998 577899999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccc-ccccccccccchHHHHhhhhcccCCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~-~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+|||++-..... ....++|| +|.|.+||++.+.+|.. .+|-|+.|.+. |..+-+-.+|.||.+
T Consensus 195 ADFGLSNly~~~-----------kfLqTFCG-SPLYASPEIvNG~PY~GPEVDsWsLGvLL-YtLVyGtMPFDG~Dh 258 (668)
T KOG0611|consen 195 ADFGLSNLYADK-----------KFLQTFCG-SPLYASPEIVNGTPYKGPEVDSWSLGVLL-YTLVYGTMPFDGRDH 258 (668)
T ss_pred eccchhhhhccc-----------cHHHHhcC-CcccCCccccCCCCCCCCccchhhHHHHH-HHHhhcccccCCchH
Confidence 999998743211 01124454 78999999999999954 99999999876 666666777888764
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=318.47 Aligned_cols=172 Identities=19% Similarity=0.245 Sum_probs=143.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-ccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~ 183 (1620)
.|++++.||+|+-++||++.. .++..+|+|++.......+...-+. +|+.+|.+|+ |.+||+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~--------nEI~lL~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYR--------NEIALLNKLKGHDKIIQLY 426 (677)
T ss_pred hhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHH--------HHHHHHHHhcCCceEEEEe
Confidence 799999999999999999985 6678899999877655555555565 9999999995 89999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
||-..++.+||||||-+.||..+|+. .....+.+.+++|.+|++.|+.++|.+||||-||||.|+|+-.. .+||+|
T Consensus 427 DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG---~LKLID 502 (677)
T KOG0596|consen 427 DYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG---RLKLID 502 (677)
T ss_pred eeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee---eEEeee
Confidence 99999999999999999999999984 44556678999999999999999999999999999999999875 599999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
||+|....... ... ....-.||+.||+||.+.
T Consensus 503 FGIA~aI~~DT-TsI--------~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 503 FGIANAIQPDT-TSI--------VKDSQVGTVNYMSPEALT 534 (677)
T ss_pred echhcccCccc-cce--------eeccccCcccccCHHHHh
Confidence 99999543221 111 112224799999999764
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-31 Score=325.25 Aligned_cols=144 Identities=17% Similarity=0.104 Sum_probs=127.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|... ....+..||+|.+...+. .. +|+++|+.++||||+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 457999999999999999998751 124567899998865321 11 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++...+.+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999996 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 228 DfG~a~~ 234 (392)
T PHA03207 228 DFGAACK 234 (392)
T ss_pred cCccccc
Confidence 9999974
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=319.30 Aligned_cols=143 Identities=21% Similarity=0.229 Sum_probs=118.4
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
.++||+|+||+||+|++. ...+++.+|+|.+...... .... +|+++|+.++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 468999999999999862 1245688999998653222 1222 89999999999999999999864
Q ss_pred --CCEEEEEEeCCCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec----CCC
Q 000355 189 --SGLITSVIPKTPYTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 255 (1620)
Q Consensus 189 --~~~~~lV~E~~~g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~~ 255 (1620)
+..+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 45789999999999999886421 23588999999999999999999999999999999999994 445
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+|+.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07868 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeecCceec
Confidence 799999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=317.19 Aligned_cols=148 Identities=22% Similarity=0.286 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|++.+.||+|+||.||+|++. .++..+|+|.++...... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccCC-cchhHH--------HHHHHHHhCCCCCcceE
Confidence 678999999999999999999862 356789999987543221 122233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999999988743 44578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 147 Dfg~~~ 152 (309)
T cd07872 147 DFGLAR 152 (309)
T ss_pred ccccce
Confidence 999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-31 Score=313.12 Aligned_cols=148 Identities=22% Similarity=0.269 Sum_probs=123.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~ 181 (1620)
+|++.+.||+|+||+||+|++. .+++.+|+|.++............. +|+.+++.+ +||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999999962 4678999999876432221112222 666666655 7999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99998653 468999999999999999865555689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 146 -~~kl~dfg~~~ 156 (288)
T cd07863 146 -QVKLADFGLAR 156 (288)
T ss_pred -CEEECccCccc
Confidence 89999999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=323.03 Aligned_cols=187 Identities=19% Similarity=0.260 Sum_probs=145.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4689999999999999999999862 4578999999976433333333444 8999999999999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++...+ .+|+||||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999987553 579999999999888875 2478889999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~i 320 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|++
T Consensus 161 --~~kl~Dfg~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i 211 (359)
T cd07876 161 --TLKILDFGLARTACTNF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 211 (359)
T ss_pred --CEEEecCCCccccccCc------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHH
Confidence 89999999997421100 0011225666777776655555555555555543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=320.37 Aligned_cols=141 Identities=20% Similarity=0.203 Sum_probs=122.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||++++. .++..||+|.+....... .....+. +|+++++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 46999999999999862 467899999987632222 1222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999985 9988887 456789999999999999999999999999999999999999998 8999999998
Q ss_pred c
Q 000355 268 G 268 (1620)
Q Consensus 268 ~ 268 (1620)
+
T Consensus 143 ~ 143 (323)
T cd05595 143 K 143 (323)
T ss_pred c
Confidence 7
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=319.63 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=121.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|++.+..... .....+. +|+.++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 46999999999999862 457899999987542221 1222333 788888776 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999995 9999887 356789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (320)
T cd05590 143 CKE 145 (320)
T ss_pred Cee
Confidence 873
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=285.85 Aligned_cols=280 Identities=18% Similarity=0.296 Sum_probs=239.1
Q ss_pred hhhcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCce--eEEeecccCcEEEEEEccCCCEEEEecc
Q 000355 1214 RQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASI--LSSIRAHHGALRSVAVGQDECTVFTAGI 1289 (1620)
Q Consensus 1214 ~~~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~--l~tl~gH~~~V~svafspdg~~LaSgs~ 1289 (1620)
...+...+.||++.|+. |+|+|.+ +||||.|..|.+|+..|.+ ..+++||+++|..+.|..|+..|+|+|.
T Consensus 36 l~ap~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 36 LQAPIMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred ccchhhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC
Confidence 34567788999999996 9999997 9999999999999988654 5678899999999999999999999998
Q ss_pred CCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1290 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1290 d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
|++|+.||+++|++++.+++|.+-|++++-..-|..+ +|.|||+++||+++..+++++...
T Consensus 111 ----Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k------------ 174 (338)
T KOG0265|consen 111 ----DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK------------ 174 (338)
T ss_pred ----CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc------------
Confidence 9999999999999999999999999999854445555 445999999999999988877532
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCcc
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V 1446 (1620)
..++++.|..++..+.+|+-|+.|++||++.+..++++.||... |
T Consensus 175 -----------------------------yqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~Dt------I 219 (338)
T KOG0265|consen 175 -----------------------------YQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADT------I 219 (338)
T ss_pred -----------------------------eeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCc------e
Confidence 12456666667999999999999999999999999999987654 6
Q ss_pred ceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC----CcEEEEEEccC--CcEEEE--E-eCCCCEEEEEeCCC
Q 000355 1447 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS----GNVIASWRAHD--GYVTKL--A-APEDHLLVSSSLDK 1517 (1620)
Q Consensus 1447 ~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t----g~~i~~l~gH~--~~V~sv--a-spdg~~LaSgS~Dg 1517 (1620)
+.+..+ ++|.++.+-+-|.++++||++- ..++..+.+|. -..+.+ + +|+++.+.+||.|+
T Consensus 220 t~lsls-----------~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr 288 (338)
T KOG0265|consen 220 TGLSLS-----------RYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR 288 (338)
T ss_pred eeEEec-----------cCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccc
Confidence 777665 6678999999999999999984 34578887764 334444 3 89999999999999
Q ss_pred cEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEE
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGL 1562 (1620)
Q Consensus 1518 tI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~v 1562 (1620)
.+++||.... ..++.+.||.+.|++ |+|....+.+++.|+ |.+
T Consensus 289 ~vyvwd~~~r--~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 289 FVYVWDTTSR--RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eEEEeecccc--cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 9999999876 677899999999995 999999999999998 765
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=318.10 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=121.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHH---hhccCCcccccc
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESS---VPGCLRHPNVAP 181 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~---iL~~l~HpNIv~ 181 (1620)
|++++.||+|+||.||+|.+. .+++.||||++++...... ....+. +|++ +++.++||||++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~--------~e~~~~~~~~~l~hp~i~~ 66 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLM--------CEKRIFETANSERHPFLVN 66 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccccCCCChhc
Confidence 678999999999999999862 4578999999976432222 122222 4554 456778999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++.+.+.+|+||||++| +|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~k 141 (324)
T cd05589 67 LFACFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVK 141 (324)
T ss_pred eeeEEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEE
Confidence 99999999999999999995 8888876 35689999999999999999999999999999999999999999 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 142 L~Dfg~~~ 149 (324)
T cd05589 142 IADFGLCK 149 (324)
T ss_pred eCcccCCc
Confidence 99999987
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-33 Score=317.93 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=145.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|..++.||+|+||.||+|.+. .+++.||+|++....... ...+.. +|+.+|..+++|||.++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d-eIediq--------qei~~Ls~~~~~~it~y 76 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED-EIEDIQ--------QEISVLSQCDSPNITEY 76 (467)
T ss_pred ccccccchhccccccceeeeeeec------cccceEEEEEechhhcch-hhHHHH--------HHHHHHHhcCcchHHhh
Confidence 346888899999999999999983 467999999998754332 233333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|+.|..+..++++||||.| ++.+.++ ....+.+.++..++++++.||.|||.++.+|||||+.|||+..+| .+||
T Consensus 77 ygsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl 152 (467)
T KOG0201|consen 77 YGSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKL 152 (467)
T ss_pred hhheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEE
Confidence 9999999999999999995 9999998 556668999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
+|||++.+....... .....|||+|||||++.
T Consensus 153 ~DfgVa~ql~~~~~r-----------r~tfvGTPfwMAPEVI~ 184 (467)
T KOG0201|consen 153 ADFGVAGQLTNTVKR-----------RKTFVGTPFWMAPEVIK 184 (467)
T ss_pred Eecceeeeeechhhc-----------cccccccccccchhhhc
Confidence 999999854332211 12345899999999974
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=324.79 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=139.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+.+............. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999999862 45789999999753322222222222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 999999999999999998 599999873 3578999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+|||+++........ ......||+.|||||++
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 215 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVL 215 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHh
Confidence 999999843211000 01112367778888765
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=320.04 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
+|++++.||+|+||.||++++... ..+++.+|+|++.+..... .....+. +|+++++.+ +||||++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~i~~ 69 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTG---HDTGKLYAMKVLQKAALVQKAKTVEHTR--------TERNVLEHVRQSPFLVT 69 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEccc---CCCCCEEEEEEEEHHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccc
Confidence 589999999999999999986321 2468899999987532211 1112222 899999999 4899999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~k 145 (332)
T cd05614 70 LHYAFQTEAKLHLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVV 145 (332)
T ss_pred EEEEEecCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEE
Confidence 99999999999999999995 9999987 356689999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 146 l~DfG~~~~ 154 (332)
T cd05614 146 LTDFGLSKE 154 (332)
T ss_pred EeeCcCCcc
Confidence 999999984
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=319.10 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=123.5
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
++.||+|+||.||+|++... ...++.+|+|.+....... .....+. +|+.+|+.++||||++++++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTG---ADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEccc---CCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 36899999999999986321 2467899999987532211 1112222 899999999999999999999
Q ss_pred EeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999995 9999997 456788999999999999999999999999999999999999998 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 146 ~~~ 148 (323)
T cd05584 146 LCK 148 (323)
T ss_pred CCe
Confidence 987
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=320.41 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=122.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999999862 4678999999976432221 222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
++.+|+||||+++ +|.+++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999995 9988887 45678999999999999999999997 8999999999999999999 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (325)
T cd05594 143 CKE 145 (325)
T ss_pred Cee
Confidence 873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=321.57 Aligned_cols=151 Identities=25% Similarity=0.289 Sum_probs=128.5
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+...++|++++.||+|+||.||+|.+. .++..||+|++............+. +|+++|+.++||||
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 76 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENV 76 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCch
Confidence 345679999999999999999999862 4578899999875432222233333 89999999999999
Q ss_pred cceeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 180 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 180 v~l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++++... ...|++||+++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 77 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~ 153 (343)
T cd07878 77 IGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 153 (343)
T ss_pred hhhhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC
Confidence 9999988643 3579999999889998886 346899999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCccc
Q 000355 254 SCWSWLYICDKPLVGF 269 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~ 269 (1620)
++ .+||+|||+++.
T Consensus 154 ~~--~~kl~Dfg~~~~ 167 (343)
T cd07878 154 DC--ELRILDFGLARQ 167 (343)
T ss_pred CC--CEEEcCCcccee
Confidence 98 899999999883
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=319.85 Aligned_cols=187 Identities=20% Similarity=0.254 Sum_probs=146.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. ..++.+|||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4679999999999999999999872 3568899999876433333333344 8999999999999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++... ..+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988654 36899999999999988862 367888999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~i 320 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|++
T Consensus 164 --~~kL~DfG~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i 214 (364)
T cd07875 164 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214 (364)
T ss_pred --cEEEEeCCCccccCCCC------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHH
Confidence 89999999998432100 0112235677888877666555555566655544
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=315.82 Aligned_cols=146 Identities=17% Similarity=0.130 Sum_probs=125.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCc-ccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRH-PNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~H-pNIv~l 182 (1620)
+|++++.||+|+||.||+|++. .+++.||+|++.+..... .....+. .|++++..++| ++|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5889999999999999999862 356889999987643222 2223333 89999999976 468899
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 999999999999999998 59999987 355689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 143 ~Dfg~~~ 149 (324)
T cd05587 143 ADFGMCK 149 (324)
T ss_pred eecCcce
Confidence 9999987
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=320.30 Aligned_cols=185 Identities=20% Similarity=0.261 Sum_probs=142.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. ..++.+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4679999999999999999999862 3578899999876433333333444 8999999999999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++.... .+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 999986543 5799999999999888762 478889999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|
T Consensus 157 --~~kl~Dfg~~~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 205 (355)
T cd07874 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205 (355)
T ss_pred --CEEEeeCcccccCCCcc------------ccCCccccCCccCHHHHcCCCCCchhhHHHHH
Confidence 89999999998421100 01112356667777665444344444444444
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=315.44 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=139.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||++++. .+++.||+|++.+.........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 47999999999999999999862 45789999998753222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++++|+||||++ |+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 599999973 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
|||+++........ ....+.||+.|||||++
T Consensus 145 Dfg~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 175 (331)
T cd05597 145 DFGSCLRLLADGTV----------QSNVAVGTPDYISPEIL 175 (331)
T ss_pred ECCceeecCCCCCc----------cccceeccccccCHHHH
Confidence 99998743211100 01122367778888775
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=326.36 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=135.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC------c
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR------H 176 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~------H 176 (1620)
.++|++++.||+|+||+||+|.+. ..++.||||+++..... ..+.. +|+++++.++ |
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKY---TRDAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhh---HHHHH--------HHHHHHHHHhhcCcccC
Confidence 468999999999999999999862 35788999998642111 11222 4565555554 4
Q ss_pred ccccceeeEEEeC-CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCC
Q 000355 177 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 177 pNIv~l~~~~~~~-~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~ 254 (1620)
++|++++++|..+ .++|+|||+++++|.+++. +.+.+++..++.|+.||+.||.|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 5689999998765 4899999999999999987 35678999999999999999999998 599999999999999876
Q ss_pred Cc--------------eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 255 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 255 ~~--------------~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
+. ..+||+|||++...... .....||+.|||||++.+..|+.++|+|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~--------------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 332 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHS--------------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccc--------------cccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence 51 14999999987632100 1112367888888887554444444444444
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=271.30 Aligned_cols=264 Identities=14% Similarity=0.215 Sum_probs=218.9
Q ss_pred CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCce--EEEEeccCCcc
Q 000355 1282 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKL--LSVFAEQSMDS 1358 (1620)
Q Consensus 1282 ~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~--i~~l~~~~~~~ 1358 (1620)
-+|+|+| ||.|||+|.+.||.|.++++--.+.|+.+...|+.+.| +.+.-.||+||++++.. +.++.+|.
T Consensus 11 viLvsA~----YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~--- 83 (311)
T KOG0315|consen 11 VILVSAG----YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHT--- 83 (311)
T ss_pred eEEEecc----CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccC---
Confidence 4788887 69999999999999999999778899999999999998 56689999999998764 55665542
Q ss_pred ccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCc
Q 000355 1359 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1438 (1620)
Q Consensus 1359 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~ 1438 (1620)
.. |+.+.|..+|+.+++|++||++|+||+|...+.+.++
T Consensus 84 ---------------------------kN----------VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~---- 122 (311)
T KOG0315|consen 84 ---------------------------KN----------VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ---- 122 (311)
T ss_pred ---------------------------Cc----------eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc----
Confidence 22 5566666689999999999999999999977766665
Q ss_pred ccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-ccCCcEEEEE-eCCCCEEEEEeCC
Q 000355 1439 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLD 1516 (1620)
Q Consensus 1439 ~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH~~~V~sva-spdg~~LaSgS~D 1516 (1620)
+.+.|++|+.. |+..-|++|..+|.|++||+++..+...+. .-..+|.+++ .|||.+|+.+...
T Consensus 123 ---~~spVn~vvlh-----------pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 123 ---HNSPVNTVVLH-----------PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred ---CCCCcceEEec-----------CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 56679999986 455689999999999999999887766654 3457899999 9999999999999
Q ss_pred CcEEEEECCCCC----CCCCeEeecCCCCEE-E-EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCC
Q 000355 1517 KTLRIWDLRRNW----PSQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGA 1589 (1620)
Q Consensus 1517 gtI~IWDl~~~~----~~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~ 1589 (1620)
|+.++|++-+.. ..++..++.|.+-+. | +|||+++||++|.|+ ++||+++.. + ++.....
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~--------~---kle~~l~-- 255 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF--------F---KLELVLT-- 255 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc--------e---eeEEEee--
Confidence 999999987642 244557888988887 4 999999999999999 999998621 1 2222222
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1590 KNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1590 ~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+|.+.+++++||.||++|+|||.|+.+|+|+
T Consensus 256 gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred cCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 5889999999999999999999999999996
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=314.28 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=119.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|.++...... ....... .|..++.. ++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999999962 467899999997642211 1122222 78888765 48999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+++.+|+||||+.| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999985 9999987 356789999999999999999999999999999999999999998 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (316)
T cd05620 143 CK 144 (316)
T ss_pred Ce
Confidence 87
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=313.99 Aligned_cols=147 Identities=17% Similarity=0.130 Sum_probs=125.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccC-Ccccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l 182 (1620)
+|++++.||+|+||.||+|++. .+++.+|+|.+.+....... ..... .|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5889999999999999999862 35689999999764322221 22223 788888777 57999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+.+|+||||++ |+|.+.+. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 999999999999999998 59999987 356689999999999999999999999999999999999999999 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~DfG~~~~ 150 (323)
T cd05616 143 ADFGMCKE 150 (323)
T ss_pred ccCCCcee
Confidence 99999873
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=315.78 Aligned_cols=143 Identities=20% Similarity=0.212 Sum_probs=123.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.||+|++++.........+.+. +|+.+++.+ +||||++++++|.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 46999999999999862 45789999999764333322222222 899999888 79999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999985 9998887 356789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 144 ~~ 145 (329)
T cd05588 144 KE 145 (329)
T ss_pred cc
Confidence 73
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=315.29 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=120.6
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.+|+|.+........ ....+. .|.+++..+ +||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999862 4578999999876432222 222233 788888765 7999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+++.+|+||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999985 9999887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (321)
T cd05591 143 CK 144 (321)
T ss_pred ce
Confidence 87
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=292.32 Aligned_cols=209 Identities=20% Similarity=0.209 Sum_probs=182.5
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.....++|++.+.||+|.||.||+|+.+ .++.+||+|++.+...........++ ||++|-..|+|||
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hpn 83 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHPN 83 (281)
T ss_pred cccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCcc
Confidence 3445789999999999999999999962 46789999999887655555555554 9999999999999
Q ss_pred ccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|+++|++|.++..+||++||.+ |+|+..++..+...+++..+..|++|++.||.|||.++||||||||+|+|++..+
T Consensus 84 ilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~-- 161 (281)
T KOG0580|consen 84 ILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG-- 161 (281)
T ss_pred HHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--
Confidence 9999999999999999999999 7999999977778899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
.+||+|||.+..... +.+.+-| ||..|.+||+..+..++..+|.|+.|.+. ||+|.+..+|...+
T Consensus 162 ~lkiAdfGwsV~~p~------------~kR~tlc-gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~-yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 162 ELKIADFGWSVHAPS------------NKRKTLC-GTLDYLPPEMVEGRGHDKFVDLWSLGVLC-YEFLVGLPPFESQS 226 (281)
T ss_pred CeeccCCCceeecCC------------CCceeee-cccccCCHhhcCCCCccchhhHHHHHHHH-HHHHhcCCchhhhh
Confidence 899999999985321 1123334 58899999999999999999999999776 99999998886654
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=314.20 Aligned_cols=141 Identities=23% Similarity=0.246 Sum_probs=119.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHH-hhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.||+|++.+..... ....+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999999972 467899999987532221 1222333 4544 568899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999995 9999987 356789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (323)
T cd05575 143 CK 144 (323)
T ss_pred Cc
Confidence 87
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=293.18 Aligned_cols=269 Identities=15% Similarity=0.245 Sum_probs=223.1
Q ss_pred CCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC
Q 000355 1225 EPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1303 (1620)
Q Consensus 1225 ~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~ 1303 (1620)
.+.|+++-.|..- +++|+.|.+|++||.+ -.+++.|.||+++|.|+.|. .+.++|||. |.||++||+.
T Consensus 197 skgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSS----DsTvrvWDv~ 265 (499)
T KOG0281|consen 197 SKGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSS----DSTVRVWDVN 265 (499)
T ss_pred CCceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCC----CceEEEEecc
Confidence 4567776555443 9999999999999988 67999999999999999996 459999998 8999999999
Q ss_pred CCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce---EEEEeccCCccccccCCCCCccccccccccc
Q 000355 1304 RINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL---LSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1378 (1620)
Q Consensus 1304 tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~---i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1378 (1620)
||+++.++-+|.+.|..+.|+ + +++ .|.|.++.+||+.+... .+++.
T Consensus 266 tge~l~tlihHceaVLhlrf~-n-g~mvtcSkDrsiaVWdm~sps~it~rrVLv-------------------------- 317 (499)
T KOG0281|consen 266 TGEPLNTLIHHCEAVLHLRFS-N-GYMVTCSKDRSIAVWDMASPTDITLRRVLV-------------------------- 317 (499)
T ss_pred CCchhhHHhhhcceeEEEEEe-C-CEEEEecCCceeEEEeccCchHHHHHHHHh--------------------------
Confidence 999999999999999999984 3 455 44599999999875432 11222
Q ss_pred ccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccc
Q 000355 1379 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1458 (1620)
Q Consensus 1379 ~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~ 1458 (1620)
+|...|..+.|+ .++++++|+|.||++|++.|++.++++.+|... |-|+.+
T Consensus 318 ----GHrAaVNvVdfd------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRG------IAClQY------- 368 (499)
T KOG0281|consen 318 ----GHRAAVNVVDFD------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG------IACLQY------- 368 (499)
T ss_pred ----hhhhheeeeccc------------cceEEEecCCceEEEEeccceeeehhhhccccc------ceehhc-------
Confidence 233445556665 459999999999999999999999999987654 444443
Q ss_pred cCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCC-------C
Q 000355 1459 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS-------Q 1531 (1620)
Q Consensus 1459 ~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~-------~ 1531 (1620)
.|+++++|++|.+|++||+..|.+++.++||+.-|+++.. |.+.++||+.||+|++||+..+... +
T Consensus 369 ------r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~C 441 (499)
T KOG0281|consen 369 ------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 441 (499)
T ss_pred ------cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-cCceeeeccccceEEEEecccccCCcccccchH
Confidence 4579999999999999999999999999999999999985 4568999999999999999886432 4
Q ss_pred CeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1532 PTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1532 ~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
+.++..|++.|..+..|...+++++.|. |-+||+...
T Consensus 442 l~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 442 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNG 479 (499)
T ss_pred HHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCC
Confidence 5567789999999999999999998776 999998743
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=312.13 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=119.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|.++....... ...... .|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999862 4578899999976432221 222222 67777664 48999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999984 9999987 345789999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 a~~ 145 (316)
T cd05592 143 CKE 145 (316)
T ss_pred CeE
Confidence 983
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=315.61 Aligned_cols=146 Identities=20% Similarity=0.208 Sum_probs=124.8
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
++.||+|+||.||++++.... .++..+|+|++............+. +|+++|+.++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGP---DAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEeccC---CCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 367999999999999863321 4688999999976432222222233 89999999999999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||++ |+|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 999999999998 59999987 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 146 ~~ 147 (318)
T cd05582 146 KE 147 (318)
T ss_pred cc
Confidence 73
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=278.55 Aligned_cols=282 Identities=18% Similarity=0.343 Sum_probs=230.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC-CCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1337 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~-tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV 1337 (1620)
.+..+.||++.|+.+.|+|+|..+||||. |..|.+|++. .-+-..+++||+++|..+.|..++..+.|+ |++|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 34567899999999999999999999996 9999999964 334567889999999999999999999655 9999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEEECC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGN 1416 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasgs~D 1416 (1620)
+.||.++|++++.+++|... ++.+....-| ..+.+|+.|
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~----------------------------------------vNs~~p~rrg~~lv~SgsdD 154 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSF----------------------------------------VNSLDPSRRGPQLVCSGSDD 154 (338)
T ss_pred EEEecccceeeehhccccce----------------------------------------eeecCccccCCeEEEecCCC
Confidence 99999999999988876432 1122212223 356689999
Q ss_pred CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1496 (1620)
Q Consensus 1417 gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~ 1496 (1620)
+++|+||+|+..+++++... -.+++++|. ..+.-+.+|+-|+.|++||+|.+....+++||.
T Consensus 155 ~t~kl~D~R~k~~~~t~~~k-------yqltAv~f~-----------d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 155 GTLKLWDIRKKEAIKTFENK-------YQLTAVGFK-----------DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred ceEEEEeecccchhhccccc-------eeEEEEEec-----------ccccceeeccccCceeeeccccCcceEEeeccc
Confidence 99999999999888877532 236778875 334679999999999999999999999999999
Q ss_pred CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC--CCCeEeecCCCC--EE----EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1497 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP--SQPTVFKGHTNG--IS----GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1497 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~--~~~~~l~gH~~~--V~----afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
++|+.+. +++|.++.|-+.|.++++||++--.+ .++..+.||... .+ +|||++..+.+|+.|+ +++||..
T Consensus 217 DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~ 296 (338)
T KOG0265|consen 217 DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTT 296 (338)
T ss_pred CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecc
Confidence 9999999 99999999999999999999987432 445677776543 22 4999999999999999 9999964
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
. ..-++.. .||.+.|..++|+|...++.+++.|.+|.+
T Consensus 297 ~-----------r~~lykl---pGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 297 S-----------RRILYKL---PGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred c-----------ccEEEEc---CCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 1 0112222 269999999999999999999999999875
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=285.15 Aligned_cols=282 Identities=18% Similarity=0.332 Sum_probs=237.0
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
...+.||.+||-+ +.|...| ++|||.|++++|||++ |.+..++.||-..|+.|++|+--.+++||+. |
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----d 214 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----D 214 (460)
T ss_pred hhhhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----C
Confidence 4557799999997 7777888 9999999999999999 8899999999999999999999999999998 8
Q ss_pred cEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1295 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
+.|+.||++..+.++.+.||-..|.|++.+|....++++ |.++||||+++...+.++.+|...
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~--------------- 279 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNP--------------- 279 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCc---------------
Confidence 999999999999999999999999999999998888554 999999999999999999887432
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1452 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1452 (1620)
| ..+.+.+-+..+++||.|++|++||++.|+...++..|.. .|+++|..
T Consensus 280 ---------------V----------~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkk------svral~lh 328 (460)
T KOG0285|consen 280 ---------------V----------ASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKK------SVRALCLH 328 (460)
T ss_pred ---------------c----------eeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccc------eeeEEecC
Confidence 3 3333344466899999999999999999999988876543 48888876
Q ss_pred CCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1453 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1453 ~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
| .-..+|+++.| .|+-|++..|..+..+.+|..-|++++..++.++++|++.|.|..||.+++..-+.
T Consensus 329 P-----------~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~ 396 (460)
T KOG0285|consen 329 P-----------KENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR 396 (460)
T ss_pred C-----------chhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCccccc
Confidence 4 33578888877 79999999999999999999999999955566999999999999999998743111
Q ss_pred e-Eee--c---CCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1533 T-VFK--G---HTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1533 ~-~l~--g---H~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
. +.. | ...+|. ||.-.|..|+||..|+ |.+|.-+
T Consensus 397 ~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 397 GQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 1 111 1 112344 4777899999999999 9999843
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=310.54 Aligned_cols=184 Identities=17% Similarity=0.192 Sum_probs=144.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||++++. .++..+|+|.+.... .......+. +|+++|++++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 468999999999999999999972 457889999987532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++..++.+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999995 99999983 45688999999999999999999986 699999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|+|||+++...... .....||+.|+|||++.+..++.++|+|+.|
T Consensus 145 l~Dfg~~~~~~~~~-------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG 189 (331)
T cd06649 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 189 (331)
T ss_pred EccCcccccccccc-------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHH
Confidence 99999987331100 0112256667777765444444444444444
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=314.67 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=152.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|++. .++..||+|...... ..+|+.+++.++||||+++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~ 122 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRM 122 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcCh
Confidence 347999999999999999999962 346789999754321 1279999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++...+..++||||+.++|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 123 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~ 199 (357)
T PHA03209 123 KDTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIG 199 (357)
T ss_pred hheEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999999999999874 345689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+++...... ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 200 DfG~a~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl 246 (357)
T PHA03209 200 DLGAAQFPVVAP------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVL 246 (357)
T ss_pred cCccccccccCc------------ccccccccccccCCeecCCCCCCchhhHHHHHHHH
Confidence 999997422110 01123478889999998888888888999888665
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=304.45 Aligned_cols=368 Identities=17% Similarity=0.240 Sum_probs=272.4
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC--CceeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~--g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
-...+.||.+-|++ |.|+-.. .+|++|+.|+++++||+. ..++.++++|.+.|++++|++|+..++++|.
T Consensus 139 ~th~fkG~gGvVssl~F~~~~~~---~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~R--- 212 (775)
T KOG0319|consen 139 CTHSFKGHGGVVSSLLFHPHWNR---WLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGR--- 212 (775)
T ss_pred EEEEecCCCceEEEEEeCCccch---hheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEecc---
Confidence 46778999999997 7766543 459999999999999988 4479999999999999999999999999998
Q ss_pred CCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC-----CCeE--EEeCCcEEEEeCCCCceEEEEeccCC---------
Q 000355 1293 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-----SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSM--------- 1356 (1620)
Q Consensus 1293 ~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~-----~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~--------- 1356 (1620)
|+.+.|||+.+.++.++++ --..+.++.+.++ +.++ ++.+|.+++||.++++++........
T Consensus 213 -Dkvi~vwd~~~~~~l~~lp-~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~ 290 (775)
T KOG0319|consen 213 -DKVIIVWDLVQYKKLKTLP-LYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAI 290 (775)
T ss_pred -CcEEEEeehhhhhhhheec-hhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceec
Confidence 8999999998877777765 3456677777666 4455 66699999999887765432211100
Q ss_pred ----------------------------------------------ccccccCCCCCcccccccccccccccCCCCCeEE
Q 000355 1357 ----------------------------------------------DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1390 (1620)
Q Consensus 1357 ----------------------------------------------~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~s 1390 (1620)
.....++.++.............-..+|+..|.+
T Consensus 291 ~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlS 370 (775)
T KOG0319|consen 291 ESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLS 370 (775)
T ss_pred cccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheee
Confidence 0000000000000000000000111234444444
Q ss_pred Ee-e-----------------------------------cCCceEEEEEecCC-CEEEEEECCCcEEEEECCCCcee---
Q 000355 1391 TA-F-----------------------------------DGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKL--- 1430 (1620)
Q Consensus 1391 v~-f-----------------------------------~~~~vt~v~~s~dg-~~lasgs~DgtVrlwDl~tg~~l--- 1430 (1620)
+. + +.+.+.+++.+..+ ..++++|.|+++++|++...+..
T Consensus 371 L~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~ 450 (775)
T KOG0319|consen 371 LDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFP 450 (775)
T ss_pred eeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccccc
Confidence 33 1 11224555554433 57889999999999999763221
Q ss_pred EEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCE
Q 000355 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHL 1509 (1620)
Q Consensus 1431 ~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~ 1509 (1620)
..+........|.-.|+||+++ |+.++|||||.|.+.++|++..+..+.++.||...|++|. +++++.
T Consensus 451 ~~~~~~~t~~aHdKdIN~Vaia-----------~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~ 519 (775)
T KOG0319|consen 451 IVLTCRYTERAHDKDINCVAIA-----------PNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL 519 (775)
T ss_pred ceehhhHHHHhhcccccceEec-----------CCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence 1222222233466779999987 4556999999999999999999999999999999999999 999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeec
Q 000355 1510 LVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVD 1586 (1620)
Q Consensus 1510 LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~ 1586 (1620)
++|+|.|+||+||.+.+. .++.++.||+..|. +|-.+|+.|+|++.|| |++|++. ++.+. . +.
T Consensus 520 laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik-----t~eC~----~--tl- 585 (775)
T KOG0319|consen 520 LATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK-----TNECE----M--TL- 585 (775)
T ss_pred eEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc-----chhhh----h--hh-
Confidence 999999999999999998 78899999999998 4999999999999999 9999986 22221 1 11
Q ss_pred CCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1587 NGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1587 ~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+.|...|++++.+|++.+++|||.||.|.+|
T Consensus 586 --D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w 616 (775)
T KOG0319|consen 586 --DAHNDRVWALSVSPLLDMFVTGGGDGRIIFW 616 (775)
T ss_pred --hhccceeEEEeecCccceeEecCCCeEEEEe
Confidence 2599999999999999999999999999999
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=310.33 Aligned_cols=142 Identities=16% Similarity=0.111 Sum_probs=119.9
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.||+|.++...... ....... .|..++.. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999999862 457889999997642211 1122222 67888775 48999999999999
Q ss_pred eCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++ |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 9999999999998 599999973 45688999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (316)
T cd05619 143 CKE 145 (316)
T ss_pred ceE
Confidence 873
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=289.06 Aligned_cols=313 Identities=18% Similarity=0.251 Sum_probs=259.7
Q ss_pred CCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----ceeEEee------cc----cCcEEEEEEccCCCEEEE
Q 000355 1224 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-----SILSSIR------AH----HGALRSVAVGQDECTVFT 1286 (1620)
Q Consensus 1224 H~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g-----~~l~tl~------gH----~~~V~svafspdg~~LaS 1286 (1620)
|+..|.+ ++|-.. .++++|+.|-+.++|++.- .....|+ |+ +..|++++|+.+|..||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 7787764 766554 2389999999999999751 1111222 22 357999999999999999
Q ss_pred eccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCC
Q 000355 1287 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364 (1620)
Q Consensus 1287 gs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~ 1364 (1620)
|+. ||.+|+|+. +|..+.+|..|+++|.++.|+..|.+|.|. ||++.+||..+|++.+.+..|+..
T Consensus 253 G~~----~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~------- 320 (524)
T KOG0273|consen 253 GSE----DGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAP------- 320 (524)
T ss_pred eec----CcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCC-------
Confidence 996 999999997 477888999999999999999999999544 999999999999999888876422
Q ss_pred CCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1365 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
..++.|- +...+++++.|+.|+++.+....++.++.+|.+
T Consensus 321 -----------------------~lDVdW~-----------~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g------ 360 (524)
T KOG0273|consen 321 -----------------------ALDVDWQ-----------SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHG------ 360 (524)
T ss_pred -----------------------ccceEEe-----------cCceEeecCCCceEEEEEecCCCcceeeecccC------
Confidence 1223333 256899999999999999999999999997655
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCC---------CEEEEEe
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---------HLLVSSS 1514 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg---------~~LaSgS 1514 (1620)
.|+++.|+ |.|.+|+++|+|++++||....+.....+.+|+..|..+. +|.| ..+++++
T Consensus 361 ~V~alk~n-----------~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 361 EVNALKWN-----------PTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ceEEEEEC-----------CCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 48888886 5668999999999999999999999999999999999988 7654 4899999
Q ss_pred CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCc
Q 000355 1515 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1591 (1620)
Q Consensus 1515 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1591 (1620)
.|++|++||+..+ .++++|..|+.+|.+ |||+|+++|+|+.|| |.+|++. .+ +++.... .
T Consensus 430 ~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~-----~~-------~l~~s~~---~ 492 (524)
T KOG0273|consen 430 FDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK-----TG-------KLVKSYQ---G 492 (524)
T ss_pred cCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc-----ch-------heeEeec---C
Confidence 9999999999999 788999999999995 999999999999999 9999975 22 3333332 3
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1592 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1592 ~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+.|..++|+.+|..+..+-.||.+++.|
T Consensus 493 ~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 493 TGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred CCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 45699999999999999999999999875
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=310.40 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=120.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|.+. .++..+|+|.+.+...... ....+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999862 3568899999976432222 222223 788888877 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999985 9998887 345789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (318)
T cd05570 143 CK 144 (318)
T ss_pred Ce
Confidence 87
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=305.65 Aligned_cols=148 Identities=20% Similarity=0.265 Sum_probs=129.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcceE
Confidence 678999999999999999999862 356889999987543221 112223 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~ 146 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLDKDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (301)
T ss_pred EEEEecCCeEEEEEeccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEEC
Confidence 9999999999999999999999998742 44678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 147 dfg~~~ 152 (301)
T cd07873 147 DFGLAR 152 (301)
T ss_pred cCcchh
Confidence 999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=363.33 Aligned_cols=241 Identities=39% Similarity=0.617 Sum_probs=201.0
Q ss_pred cccccccccccccchHHHHhhhhcccCCCCCCCcCCcccceeec-cCCC-CCCCCCCCCCCCCccHHhhhcc-ccccccc
Q 000355 308 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVID-FSTK-PDENFDSGSRDLSKSKWRLAKG-DEQLDFT 384 (1620)
Q Consensus 308 y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~d-~~~~-~~~~~~~~~rdlsk~~~~~~~~-~~~~~~~ 384 (1620)
....+..|..|+++||+|+|.+|..+||++.|+.||||||||++ |... .+..++..+|++.|+.+..... .++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 46788999999999999999999999999999999999999995 4444 3889999999999997432221 1222233
Q ss_pred ccC------CCCCCccCccccccceeeecccccCchHHHHHHhhcccCCCCccchHHHhhcCCCCc----------cccC
Q 000355 385 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDE----------CIPE 448 (1620)
Q Consensus 385 ~~~------~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e----------liPe 448 (1620)
|+. ....+||.++++|+++++.|++|..|++.++..++.+|.+..++..++++..||+.+ +|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 223489999999999999999999999999999999999888888888888887655 7888
Q ss_pred cccCCccccc-------CCCC---CCCcccCCCCC-CHHHHHHHHHHhhcchHHHccCCCccccc-cccCCCchhhHhcC
Q 000355 449 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 516 (1620)
Q Consensus 449 f~~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDli-fG~kq~g~~a~~~~ 516 (1620)
||++|+||.| .+.. ++||.|||||. +|++||++||+|||++|||++||||||++ |||||.|++|+.+.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred CCCC----CCCCC-----------CC-------cccCC--cccccCCCCCCCCCCc
Q 000355 517 NVML----PSSEP-----------TK-------PKSVG--RLQLFTQPHPVRQTAT 548 (1620)
Q Consensus 517 nv~~----~~~~~-----------~~-------~~~~g--~~qlf~~pHp~r~~~~ 548 (1620)
|||+ +..+. .+ ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 65422 11 12244 7999999999996654
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=310.99 Aligned_cols=231 Identities=20% Similarity=0.412 Sum_probs=209.4
Q ss_pred cCCCCCCCCCCeEEEEcCCCCEEEEeCCC--------------------------------ceeEEeecccCcEEEEEEc
Q 000355 1231 PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------SILSSIRAHHGALRSVAVG 1278 (1620)
Q Consensus 1231 ~Spdg~~~~~~~lasgS~D~~i~lWd~~g--------------------------------~~l~tl~gH~~~V~svafs 1278 (1620)
||.|++. +|.|-.|-.|++|.+.. ....++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 7888776 88888888899998651 1245688999999999999
Q ss_pred cCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCC
Q 000355 1279 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1356 (1620)
Q Consensus 1279 pdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~ 1356 (1620)
|+.++|+|||. |++||+|++.|..|+-.++||..+|++|.|+|.|-++||+ |+|.++|.....+..+.+.+|-.
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls 536 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS 536 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence 99999999998 8999999999999999999999999999999999998655 99999999998888888887643
Q ss_pred ccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCC
Q 000355 1357 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1436 (1620)
Q Consensus 1357 ~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~ 1436 (1620)
+ |.|+.|+|+.+++++||.|.+||+||+.+|..++.|.||
T Consensus 537 D----------------------------------------V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 537 D----------------------------------------VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred c----------------------------------------cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 2 778888999999999999999999999999999999876
Q ss_pred CcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeC
Q 000355 1437 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1515 (1620)
Q Consensus 1437 ~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1515 (1620)
.. .|.+++|+ |+|.+||+|+.||.|.+||+.+|+++..+++|.+.|.++. +.+|..||+||.
T Consensus 577 ~~------~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~ 639 (707)
T KOG0263|consen 577 KG------PVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGA 639 (707)
T ss_pred CC------ceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCC
Confidence 54 58999987 6778999999999999999999999999999999999999 999999999999
Q ss_pred CCcEEEEECCCC
Q 000355 1516 DKTLRIWDLRRN 1527 (1620)
Q Consensus 1516 DgtI~IWDl~~~ 1527 (1620)
|++|++||+...
T Consensus 640 DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 640 DNSVRLWDLTKV 651 (707)
T ss_pred CCeEEEEEchhh
Confidence 999999999875
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=315.59 Aligned_cols=144 Identities=22% Similarity=0.277 Sum_probs=122.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+.++.||+|+||.||+|++. .+++.||||.+.... .......+. +|+++|+.++||||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNH-EDTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCC-cHHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567889999999999999999862 457899999986532 222223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||+++ +|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999995 76542 2346778888999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 210 ~DfG~~~~ 217 (353)
T PLN00034 210 ADFGVSRI 217 (353)
T ss_pred ccccccee
Confidence 99999984
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=265.34 Aligned_cols=285 Identities=18% Similarity=0.238 Sum_probs=229.4
Q ss_pred eeEEeecccCcEEEEEEccC-CCEEEEeccCCCCCcEEEEEeCCC---CeEEEEE-ecCCcceeEEEEeeCCCeE--EEe
Q 000355 1261 ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTR---INCVSGY-YGHEEVVNDICVLSSSGRI--ASC 1333 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspd-g~~LaSgs~d~~~DgtVrLWdl~t---g~~l~~l-~gH~~~V~sV~f~~~~~~l--aS~ 1333 (1620)
.+++++||.+.|..++|+|- |..|||||. |+.||+|+... -.|...+ .+|+..|.+|+|+|.+++| ||.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~----Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGT----DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecC----CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 46889999999999999998 899999998 99999999984 4566555 4799999999999999999 455
Q ss_pred CCcEEEEeCCCC--ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEE
Q 000355 1334 DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1411 (1620)
Q Consensus 1334 DgtV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~la 1411 (1620)
|.|+.||.-..+ +++.++.+|.. .|.|++|+++|++||
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHEn----------------------------------------EVK~Vaws~sG~~LA 121 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHEN----------------------------------------EVKCVAWSASGNYLA 121 (312)
T ss_pred cceEEEeecCCCceeEEeeeecccc----------------------------------------ceeEEEEcCCCCEEE
Confidence 999999986655 57777777642 377888888999999
Q ss_pred EEECCCcEEEEECCCC---ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC---
Q 000355 1412 VGIGNGSLRFIDINQG---QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--- 1485 (1620)
Q Consensus 1412 sgs~DgtVrlwDl~tg---~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t--- 1485 (1620)
+++.|+.|-+|.+..+ ++...++.|. +-|..|.|+|.. .+|++++.|++|++|+-..
T Consensus 122 TCSRDKSVWiWe~deddEfec~aVL~~Ht------qDVK~V~WHPt~-----------dlL~S~SYDnTIk~~~~~~ddd 184 (312)
T KOG0645|consen 122 TCSRDKSVWIWEIDEDDEFECIAVLQEHT------QDVKHVIWHPTE-----------DLLFSCSYDNTIKVYRDEDDDD 184 (312)
T ss_pred EeeCCCeEEEEEecCCCcEEEEeeecccc------ccccEEEEcCCc-----------ceeEEeccCCeEEEEeecCCCC
Confidence 9999999999998754 4566666554 447778887544 5899999999999998773
Q ss_pred CcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEE
Q 000355 1486 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLS 1563 (1620)
Q Consensus 1486 g~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vw 1563 (1620)
-.+++++.+|.+.|++++ .+.|..|+||+.|++|+||...+.. -.-|+..+..+..+...++|++.|. |++|
T Consensus 185 W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~------~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 185 WECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL------SGMHSRALYDVPWDNGVIASGGGDDAIRLF 258 (312)
T ss_pred eeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc------chhcccceEeeeecccceEeccCCCEEEEE
Confidence 358999999999999999 8899999999999999999877542 1347778887777778899998888 9999
Q ss_pred eccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecC-CCEEEEEeCCCcEEEc
Q 000355 1564 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1564 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPd-g~lLasgs~DG~IrlW 1619 (1620)
.-+... .+..- ++.....+ .|...|++++|+|. ..+|++||+||.|++|
T Consensus 259 ~~s~~~-d~p~~-----~l~~~~~~-aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 259 KESDSP-DEPSW-----NLLAKKEG-AHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred EecCCC-CCchH-----HHHHhhhc-ccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 865211 11111 11111122 58889999999995 6789999999999999
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=302.46 Aligned_cols=148 Identities=16% Similarity=0.092 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|++.+.||+|+||+||++.+. .+++.||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4889999999999999999862 457899999987643322221 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+++||||++ |+|.+++.......+++..++.++.|++.||.|||++||+||||||+|||+++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 5999888754445689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 Dfg~~~ 150 (285)
T cd05605 145 DLGLAV 150 (285)
T ss_pred eCCCce
Confidence 999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=307.86 Aligned_cols=147 Identities=16% Similarity=0.108 Sum_probs=125.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
+|+..+.||+|+||.||+|.+. .+++.||+|++.+...... ....+. .|..++..+. |++|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4778899999999999999862 4678999999876432222 222233 7888888886 5788899
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 999999999999999998 59999987 456789999999999999999999999999999999999999999 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~Dfg~~~~ 150 (323)
T cd05615 143 ADFGMCKE 150 (323)
T ss_pred eccccccc
Confidence 99999873
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=306.09 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=214.2
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC-------------------------------CeEEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-------------------------------INCVS 1309 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t-------------------------------g~~l~ 1309 (1620)
|..++..-...|+|+.|++|++.+|.|-. |..|++|.+.. +....
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~ 445 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFV----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSR 445 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhcccc----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeE
Confidence 56667666678999999999998888887 89999999852 11345
Q ss_pred EEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCC
Q 000355 1310 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1387 (1620)
Q Consensus 1310 ~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~ 1387 (1620)
++.||+++|.++.|+|+.++|.|| |++||+|.+.+..++-.+.+|. .+
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~------------------------------~P 495 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHL------------------------------AP 495 (707)
T ss_pred EeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCC------------------------------cc
Confidence 688999999999999999999665 9999999999999988887653 34
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCC
Q 000355 1388 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1467 (1620)
Q Consensus 1388 v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~ 1467 (1620)
|+.+.|.| -|-++||||.|++.++|......+++.+.+|.. -|.|+.|+ |+.+
T Consensus 496 VwdV~F~P----------~GyYFatas~D~tArLWs~d~~~PlRifaghls------DV~cv~FH-----------PNs~ 548 (707)
T KOG0263|consen 496 VWDVQFAP----------RGYYFATASHDQTARLWSTDHNKPLRIFAGHLS------DVDCVSFH-----------PNSN 548 (707)
T ss_pred eeeEEecC----------CceEEEecCCCceeeeeecccCCchhhhccccc------ccceEEEC-----------Cccc
Confidence 55555554 599999999999999999999899888887654 48899987 6668
Q ss_pred EEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--
Q 000355 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-- 1544 (1620)
Q Consensus 1468 ~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-- 1544 (1620)
++|+||.|.+||+||+.+|..++.|.||.++|.+|+ +|+|++|+||+.||.|++||+.++ ..+..+.+|++.|.+
T Consensus 549 Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~--~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 549 YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG--SLVKQLKGHTGTIYSLS 626 (707)
T ss_pred ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--cchhhhhcccCceeEEE
Confidence 999999999999999999999999999999999999 999999999999999999999998 677899999999985
Q ss_pred EeecCCEEEEEeCCc-eEEEeccC
Q 000355 1545 FSVWGQDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1545 fSpdg~~LaSgs~D~-I~vwdl~~ 1567 (1620)
||.||..||+|+.|. |++||+..
T Consensus 627 FS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 627 FSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred EecCCCEEEecCCCCeEEEEEchh
Confidence 999999999999999 99999874
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=323.57 Aligned_cols=151 Identities=14% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||+||+|++ ..+++.||||.+............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~------~~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKR------VSDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEE------cCCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 56999999999999999999986 24678999999977555444444444 89999999999999999
Q ss_pred eeEEEeCC--------EEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 183 LGLLKTSG--------LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 183 ~~~~~~~~--------~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
++.+...+ .+++||||++ |+|.++++.. ....+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 98876433 4789999999 5999998742 23568999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCccc
Q 000355 252 TDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~ 269 (1620)
+.++ .+||+|||+++.
T Consensus 177 ~~~~--~vkL~DFGls~~ 192 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKM 192 (496)
T ss_pred eCCC--CEEEEecccCee
Confidence 9998 899999999984
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=300.63 Aligned_cols=148 Identities=19% Similarity=0.245 Sum_probs=128.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 5889999999999999999862 4578999999865432222222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++.+|+||||++++|.+++.... +..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 999999999999999999999987533 35689999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 fg~~~ 149 (285)
T cd07861 145 FGLAR 149 (285)
T ss_pred cccee
Confidence 99987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=324.74 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=149.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|+++++||+|+||.||+|.+. .+++.||||++.............+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 678999999999999999999972 35789999999764433333323332 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+||||||+. ++|.+++.. .+.+++..++.|+.||+.||.|||.+||+||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 999999999999999997 499999973 45688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccc-cccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRG 318 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y-~~~~d~W~~G 318 (1620)
+|||+++........ .....+|+.|++||....... .-..+.|+.|
T Consensus 146 ~DFGls~~~~~~~~~-----------~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 146 TDFGLSKVTLNRELN-----------MMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred EeCCCCccccCCccc-----------ccccccCccccCccccccCCCCceeeeeeecC
Confidence 999999954321110 112347888999995433222 2244455555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=312.36 Aligned_cols=276 Identities=20% Similarity=0.304 Sum_probs=239.4
Q ss_pred CCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Cc--eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEE
Q 000355 1225 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1299 (1620)
Q Consensus 1225 ~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~--~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrL 1299 (1620)
...|.+ ||+||.+ +++++.|+.+++|+.. ++ .++++.+|...|++++|+|+++++++|+. |++||+
T Consensus 159 ~~sv~~~~fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiri 229 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRI 229 (456)
T ss_pred cCceEEEEEcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEE
Confidence 455554 9999998 9999999999999986 55 68888999999999999999999999997 999999
Q ss_pred EeC-CCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1300 WEL-TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1300 Wdl-~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
||+ ..+.++++++||...|++++|+|.++.++|+ |++|+|||+++|+++..+..|..
T Consensus 230 wd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~-------------------- 289 (456)
T KOG0266|consen 230 WDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD-------------------- 289 (456)
T ss_pred eeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC--------------------
Confidence 999 6669999999999999999999999777554 99999999999999999987742
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCcccccCCccceEeeeCC
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICACGS 1454 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~--~l~~l~~~~~~v~~~~~V~sva~~~~ 1454 (1620)
.+++++++++++.+++++.|+.|++||+.++. +++.+.++... . .+++++|+
T Consensus 290 --------------------~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~---~-~~~~~~fs-- 343 (456)
T KOG0266|consen 290 --------------------GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS---A-PVTSVQFS-- 343 (456)
T ss_pred --------------------ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC---C-ceeEEEEC--
Confidence 26677777889999999999999999999999 56666655432 2 57888876
Q ss_pred CccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE----eCCCCEEEEEeCCCcEEEEECCCCCCC
Q 000355 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLRRNWPS 1530 (1620)
Q Consensus 1455 ~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva----spdg~~LaSgS~DgtI~IWDl~~~~~~ 1530 (1620)
|+|.++++++.|+++++||++.+..+..+.+|...++++. ++++.++++|+.|+.|++||+.++ .
T Consensus 344 ---------p~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~--~ 412 (456)
T KOG0266|consen 344 ---------PNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG--G 412 (456)
T ss_pred ---------CCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc--c
Confidence 6778999999999999999999999999999988665554 678999999999999999999986 5
Q ss_pred CCeEeecC-CCCEE--EEeecCCEEEEEe--CCc-eEEEecc
Q 000355 1531 QPTVFKGH-TNGIS--GFSVWGQDVISIS--NNK-IGLSSLS 1566 (1620)
Q Consensus 1531 ~~~~l~gH-~~~V~--afSpdg~~LaSgs--~D~-I~vwdl~ 1566 (1620)
.+..+.+| ...+. ++++..+++++++ .|+ |++|...
T Consensus 413 ~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 413 ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 66788999 66666 4899999999998 677 9999853
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=311.49 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=144.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+.|.++..||.|+||+||+|.++ +++...|.|+|.. .+.....+++ -||+||..++||+||+
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDyl--------VEIeILa~CdHP~ivk 93 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYL--------VEIEILAECDHPVIVK 93 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhh--------hhhhhhhcCCChHHHH
Confidence 3457899999999999999999862 4567778888865 3455666776 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|++.|..++.++|+.|||+| -...++- .-+..+.+.+++.+++|++.||.|||+++|||||||..|||++-+| .++
T Consensus 94 Ll~ayy~enkLwiliEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dir 170 (1187)
T KOG0579|consen 94 LLSAYYFENKLWILIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIR 170 (1187)
T ss_pred HHHHHhccCceEEEEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEe
Confidence 99999999999999999996 5555554 3467899999999999999999999999999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|+|||.+..+.... .......|||+|||||+..
T Consensus 171 LADFGVSAKn~~t~-----------qkRDsFIGTPYWMAPEVvm 203 (1187)
T KOG0579|consen 171 LADFGVSAKNKSTR-----------QKRDSFIGTPYWMAPEVVM 203 (1187)
T ss_pred eecccccccchhHH-----------hhhccccCCcccccchhee
Confidence 99999987443211 1123456899999999864
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=294.13 Aligned_cols=318 Identities=18% Similarity=0.282 Sum_probs=257.7
Q ss_pred CeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCccee
Q 000355 1241 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1319 (1620)
Q Consensus 1241 ~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~ 1319 (1620)
.+||+|=..|...++.+. ..+++.+.--...|..++|+..|..||-|+. .=|.+-||++.+...+...+||...++
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~---klgQLlVweWqsEsYVlKQQgH~~~i~ 354 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS---KLGQLLVWEWQSESYVLKQQGHSDRIT 354 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC---ccceEEEEEeeccceeeecccccccee
Confidence 449999999999999988 6799999888889999999999999999996 246999999999999999999999999
Q ss_pred EEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCc
Q 000355 1320 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1320 sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
+++++|||++++++ ||.|||||..+|-|..+|..|.. .
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts----------------------------------------~ 394 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS----------------------------------------G 394 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC----------------------------------------c
Confidence 99999999999554 99999999999999999987742 2
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCC-
Q 000355 1398 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG- 1476 (1620)
Q Consensus 1398 vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg- 1476 (1620)
|+.+.|+..|+.+++.|-||+||.||+...+..+++..... ....|++. .|.|..+.+|+.|.
T Consensus 395 Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p-----~Qfscvav-----------D~sGelV~AG~~d~F 458 (893)
T KOG0291|consen 395 VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP-----IQFSCVAV-----------DPSGELVCAGAQDSF 458 (893)
T ss_pred eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc-----eeeeEEEE-----------cCCCCEEEeeccceE
Confidence 67777778899999999999999999999999988875432 12334443 36788999999886
Q ss_pred cEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEE
Q 000355 1477 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVI 1553 (1620)
Q Consensus 1477 ~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~La 1553 (1620)
.|.+|++.||+.+..+.||+++|.+++ +|+|..|+|||+|+|||+||+-... ....++. +...|. +|+|||+.|+
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~-~~vEtl~-i~sdvl~vsfrPdG~ela 536 (893)
T KOG0291|consen 459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS-GTVETLE-IRSDVLAVSFRPDGKELA 536 (893)
T ss_pred EEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC-ceeeeEe-eccceeEEEEcCCCCeEE
Confidence 499999999999999999999999999 9999999999999999999997653 2333443 444455 5999999999
Q ss_pred EEeCCc-eEEEeccCCCC---CCCccee----eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1554 SISNNK-IGLSSLSKSAD---EDGQHRL----VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1554 Sgs~D~-I~vwdl~~~~~---~~g~~~~----~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+++-|| |.+||...... .+|.... .....+.... .......+++++++||+.+++||..+.|+||+
T Consensus 537 VaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~-sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~ 610 (893)
T KOG0291|consen 537 VATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAEN-SAKGKTFTTICYSADGKCILAGGESNSICIYD 610 (893)
T ss_pred EEEecceEEEEEhhhceeeccccchhhccccccccceeehhh-cccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence 999999 99999763211 1111100 0111111111 12235789999999999999999999999985
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=305.98 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=117.6
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
..+||+|+||.||+|++. ...++..+|+|.+...... ..+. +|+++|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 368999999999999852 1235688999998653221 1222 89999999999999999999854
Q ss_pred --CCEEEEEEeCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec----CCC
Q 000355 189 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 255 (1620)
Q Consensus 189 --~~~~~lV~E~~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~~ 255 (1620)
+..+++||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 4588999999999999988632 123578889999999999999999999999999999999993 445
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+++.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07867 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeeccceec
Confidence 899999999983
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=301.24 Aligned_cols=142 Identities=17% Similarity=0.097 Sum_probs=120.5
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||+||+|.+. .+++.+|+|.+........ ....+. .|+++++.++||||+++++++..++
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 799999999999862 4678999999875432222 122233 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 191 LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+|+||||++| +|.+.+... ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999984 998887532 345689999999999999999999999999999999999999988 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 145 ~~ 146 (280)
T cd05608 145 VE 146 (280)
T ss_pred ee
Confidence 73
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=266.56 Aligned_cols=277 Identities=18% Similarity=0.245 Sum_probs=232.0
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
....+.+|++.|.+ |..||.| ..|++.|+++++|+.. |.+++++.||...|..++.+.|+..+++||.
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg---- 79 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG---- 79 (307)
T ss_pred hceeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----
Confidence 34567789999997 8888887 9999999999999977 9999999999999999999999999999998
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC--ceEEEEeccCCccccccCCCCCcc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
|+.|.+||++||+..+.|.||.+.|+.|+|+.+...++|+ |.++++||.++. ++++.+..
T Consensus 80 Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQilde---------------- 143 (307)
T KOG0316|consen 80 DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDE---------------- 143 (307)
T ss_pred CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhh----------------
Confidence 8999999999999999999999999999999888888655 999999999865 34544432
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceE
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sv 1449 (1620)
...+|.++... +..|++|+.||++|.||++.|+....+- ...|+|+
T Consensus 144 --------------a~D~V~Si~v~------------~heIvaGS~DGtvRtydiR~G~l~sDy~--------g~pit~v 189 (307)
T KOG0316|consen 144 --------------AKDGVSSIDVA------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF--------GHPITSV 189 (307)
T ss_pred --------------hcCceeEEEec------------ccEEEeeccCCcEEEEEeecceeehhhc--------CCcceeE
Confidence 12344444444 4589999999999999999998765443 3448999
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
+|+ ++|+...+|+-|+++++.|-.||++++..+||.+.-..+. ......+++||+||.|.+||+.+
T Consensus 190 s~s-----------~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd 258 (307)
T KOG0316|consen 190 SFS-----------KDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD 258 (307)
T ss_pred Eec-----------CCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc
Confidence 986 6778999999999999999999999999999988766665 45567899999999999999998
Q ss_pred CCCCCCeEeecCCCC-EEE--EeecCCEEEEEeCCceEEEec
Q 000355 1527 NWPSQPTVFKGHTNG-ISG--FSVWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~-V~a--fSpdg~~LaSgs~D~I~vwdl 1565 (1620)
. ..+..+..|... |.+ +.|.-..+++++..++..|--
T Consensus 259 ~--~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~ 298 (307)
T KOG0316|consen 259 E--TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWYQ 298 (307)
T ss_pred c--eeeeeeccCCceeEEeeecccCccceeEecCCceeceee
Confidence 7 556666666665 443 777777788888777777763
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=303.04 Aligned_cols=150 Identities=27% Similarity=0.258 Sum_probs=128.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..||+|.+............. ++|+.++++++||||++
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~--------~~E~~~l~~l~h~~i~~ 70 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPISS--------LREITLLLNLRHPNIVE 70 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcchh--------hHHHHHHHhCCCCCCcc
Confidence 4789999999999999999999862 457899999987543222111122 38999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 182 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++... +.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~ 147 (309)
T cd07845 71 LKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--CL 147 (309)
T ss_pred eEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CE
Confidence 99999765 578999999999999998743 35689999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 kL~dfg~~~ 156 (309)
T cd07845 148 KIADFGLAR 156 (309)
T ss_pred EECccceee
Confidence 999999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-28 Score=280.26 Aligned_cols=348 Identities=14% Similarity=0.231 Sum_probs=251.5
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
...+..|+-.|.. +||.|.| +|+|...|+|||||..++ +..+++--.++|..++|+.|++.++..|.+.+
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~y-----iASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFY-----IASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred eeeeccccceeEEEEeCCCceE-----EeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 4456667666663 9999998 999999999999998752 34556666778888888888887777775322
Q ss_pred CCcEEEEEeCCC-----------------------------------------CeEEEEEecCCcceeEEEEeeCCCeEE
Q 000355 1293 FKGTVQKWELTR-----------------------------------------INCVSGYYGHEEVVNDICVLSSSGRIA 1331 (1620)
Q Consensus 1293 ~DgtVrLWdl~t-----------------------------------------g~~l~~l~gH~~~V~sV~f~~~~~~la 1331 (1620)
.=|.+.+||..+ -+...+++.|...|+||.|+|+|.+++
T Consensus 127 rfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fa 206 (603)
T KOG0318|consen 127 RFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFA 206 (603)
T ss_pred ceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEE
Confidence 234555666432 233445566999999999999999995
Q ss_pred E--eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCE
Q 000355 1332 S--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER 1409 (1620)
Q Consensus 1332 S--~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~ 1409 (1620)
| .||+|.+||-.+|+.+..+... ..|.+.|++++|+ ||+..
T Consensus 207 t~gsDgki~iyDGktge~vg~l~~~---------------------------~aHkGsIfalsWs----------PDs~~ 249 (603)
T KOG0318|consen 207 TAGSDGKIYIYDGKTGEKVGELEDS---------------------------DAHKGSIFALSWS----------PDSTQ 249 (603)
T ss_pred EecCCccEEEEcCCCccEEEEecCC---------------------------CCccccEEEEEEC----------CCCce
Confidence 4 4999999999999999888742 2355666666655 57999
Q ss_pred EEEEECCCcEEEEECCCCceeEEeeCCCcc-------cccCCccceEeeeCC-------------------CccccCccc
Q 000355 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTE-------LGFPSLVSAICACGS-------------------EKMQAGGAV 1463 (1620)
Q Consensus 1410 lasgs~DgtVrlwDl~tg~~l~~l~~~~~~-------v~~~~~V~sva~~~~-------------------~~~~~~g~~ 1463 (1620)
+++++.|.++|+||+.+++++++|...... +.....+-.|..++. ........+
T Consensus 250 ~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 250 FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVS 329 (603)
T ss_pred EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEc
Confidence 999999999999999999888777543220 001111112222111 111233456
Q ss_pred CCCCEEEEEecCCcEEEEECCCCcE-----------EEEEEccC------------------------------------
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGNV-----------IASWRAHD------------------------------------ 1496 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~~-----------i~~l~gH~------------------------------------ 1496 (1620)
+++++|.+|+.||.|.-||..+|.. +..+..++
T Consensus 330 ~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~ 409 (603)
T KOG0318|consen 330 PDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPK 409 (603)
T ss_pred CCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCce
Confidence 7889999999999999999865421 11111110
Q ss_pred ----------------------------------CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCC
Q 000355 1497 ----------------------------------GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1541 (1620)
Q Consensus 1497 ----------------------------------~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1541 (1620)
-...+++ +|++..++.|+.|+.|+||.+..+.......+..|+.+
T Consensus 410 ~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~ 489 (603)
T KOG0318|consen 410 GLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAA 489 (603)
T ss_pred eEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCC
Confidence 0234666 78888999999999999999987654444567789999
Q ss_pred EEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1542 ISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1542 V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
|++ +|||+.+||+|...+ |.+||++. .. +..+.|.. |...|.+++|+|+++++||||-|-.|.|
T Consensus 490 iT~vaySpd~~yla~~Da~rkvv~yd~~s-----~~---~~~~~w~F-----HtakI~~~aWsP~n~~vATGSlDt~Vii 556 (603)
T KOG0318|consen 490 ITDVAYSPDGAYLAAGDASRKVVLYDVAS-----RE---VKTNRWAF-----HTAKINCVAWSPNNKLVATGSLDTNVII 556 (603)
T ss_pred ceEEEECCCCcEEEEeccCCcEEEEEccc-----Cc---eecceeee-----eeeeEEEEEeCCCceEEEeccccceEEE
Confidence 984 999999999999888 99999862 11 12233332 7788999999999999999999999999
Q ss_pred cC
Q 000355 1619 CC 1620 (1620)
Q Consensus 1619 Wd 1620 (1620)
|.
T Consensus 557 ys 558 (603)
T KOG0318|consen 557 YS 558 (603)
T ss_pred EE
Confidence 94
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=297.31 Aligned_cols=286 Identities=17% Similarity=0.263 Sum_probs=238.0
Q ss_pred CceeEEeecccCcEEEEEEcc-CCCEEEEeccCCCCCcEEEEEeCCC-CeEEEEEecCCcceeEEEEeeCCCeE--EEeC
Q 000355 1259 ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1334 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafsp-dg~~LaSgs~d~~~DgtVrLWdl~t-g~~l~~l~gH~~~V~sV~f~~~~~~l--aS~D 1334 (1620)
.+.+.++.||+..|.++.|.| .+.+|+|||. |+.|+||++.. +.|+++|.||..+|.+++|+.++..+ +|.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gm----D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGM----DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCC----CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 456889999999999999999 8899999998 99999999876 89999999999999999999999988 5559
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVG 1413 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasg 1413 (1620)
++|++||++||+++..+... ...+|+.++|++ +.+++|
T Consensus 280 ~~lKlwDtETG~~~~~f~~~-----------------------------------------~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLD-----------------------------------------KVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred eeeeeeccccceEEEEEecC-----------------------------------------CCceeeecCCCCCcEEEEe
Confidence 99999999999999888642 235677777887 889999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~ 1493 (1620)
+.|+.|+.||+|+++.++.+..|.+ .|..+.|. ++|..+++.++|+++++|+.+.+-.++...
T Consensus 319 ~sd~ki~~wDiRs~kvvqeYd~hLg------~i~~i~F~-----------~~g~rFissSDdks~riWe~~~~v~ik~i~ 381 (503)
T KOG0282|consen 319 GSDKKIRQWDIRSGKVVQEYDRHLG------AILDITFV-----------DEGRRFISSSDDKSVRIWENRIPVPIKNIA 381 (503)
T ss_pred cCCCcEEEEeccchHHHHHHHhhhh------heeeeEEc-----------cCCceEeeeccCccEEEEEcCCCccchhhc
Confidence 9999999999999999988876544 47778775 566899999999999999999987766543
Q ss_pred -ccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCC-CCCCeEeecCCCCEE----EEeecCCEEEEEeCCc-eEEEec
Q 000355 1494 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW-PSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1494 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~-~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
.+.....+|. +|++.+++.-|.|+.|.++.+...- ......++||..+-. .|||||.+|++|+.|| +.+||.
T Consensus 382 ~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 382 DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 2334556778 9999999999999999999976532 123347888876433 3999999999999999 999997
Q ss_pred cCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000355 1566 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1566 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg-~lLasgs~DG~IrlWd 1620 (1620)
.. .+++.. ...|.+++..+.|+|.. ..+||||.||.|++|+
T Consensus 462 kt------------~kl~~~--lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 462 KT------------TKLVSK--LKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred hh------------hhhhhc--cccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 51 122221 22588999999999987 4699999999999997
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=308.65 Aligned_cols=164 Identities=23% Similarity=0.300 Sum_probs=135.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
-+||+|+||+||-|+| ..+....|||-+.... + +... |...||.+.+.|+|.|||+++|.+..+
T Consensus 581 vVLGKGTYG~VYA~RD------~~tqvrIaIKEIpekd-s-r~~Q--------PLhEEIaLH~~LrHkNIVrYLGs~sen 644 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARD------MDTQVRIAIKEIPEKD-S-REVQ--------PLHEEIALHSTLRHKNIVRYLGSVSEN 644 (1226)
T ss_pred EEeecCceeEEEeecc------ccceeEEEeeeccccc-c-hhhc--------cHHHHHHHHHHHhhHhHHHHhhccCCC
Confidence 3799999999999997 2455788999986532 2 1111 334899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceEEEEeecC
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~lKL~DFG 265 (1620)
+++-|.||-.+| +|.++++. +.+++ .|..+.+|.+||++||+|||++.|||||||-+|+||+. .| .+||+|||
T Consensus 645 Gf~kIFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySG--vlKISDFG 721 (1226)
T KOG4279|consen 645 GFFKIFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSG--VLKISDFG 721 (1226)
T ss_pred CeEEEEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccc--eEEecccc
Confidence 999999999995 99999984 67777 78889999999999999999999999999999999975 45 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.++...+- ..|.....||..|||||++
T Consensus 722 TsKRLAgi-----------nP~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 722 TSKRLAGI-----------NPCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred cchhhccC-----------CccccccccchhhhChHhh
Confidence 99854321 1223445589999999986
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=319.36 Aligned_cols=149 Identities=13% Similarity=0.139 Sum_probs=126.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
..|.+.+.||+|+||.||+|.+.. ..+..||+|.+... . .......+ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~--~-~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLN--D-ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccC--C-HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999998622 22567888876542 1 22222332 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++|..++.+||||||++ |+|.++++. .....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 99999999999999998 599988863 2345688999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 210 L~DFgla~~ 218 (478)
T PTZ00267 210 LGDFGFSKQ 218 (478)
T ss_pred EEeCcCcee
Confidence 999999984
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-28 Score=288.05 Aligned_cols=360 Identities=14% Similarity=0.135 Sum_probs=275.8
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC---CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK---ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~---g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
.+..||-+-|.+ ||-|.++ +++||.|-++++|.++ +-....+.||.+.|-++-|..|...++|.|.
T Consensus 139 r~~~g~fddi~si~Ws~DSr~-----l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvsk---- 209 (893)
T KOG0291|consen 139 RTYLGHFDDITSIDWSDDSRL-----LVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSK---- 209 (893)
T ss_pred eeecCCccceeEEEeccCCce-----EEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEec----
Confidence 567789888876 8888876 9999999999999988 3357788999999999999999999999998
Q ss_pred CcEEEEEeCCC-----------------------CeE-----E------EEEecCCcceeEEEEeeCCCeEEEe--CCcE
Q 000355 1294 KGTVQKWELTR-----------------------INC-----V------SGYYGHEEVVNDICVLSSSGRIASC--DGTL 1337 (1620)
Q Consensus 1294 DgtVrLWdl~t-----------------------g~~-----l------~~l~gH~~~V~sV~f~~~~~~laS~--DgtV 1337 (1620)
||.+.+|.... ++. . .-+......|++.+|++....++.+ .|..
T Consensus 210 dG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f 289 (893)
T KOG0291|consen 210 DGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEF 289 (893)
T ss_pred CceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCee
Confidence 89999997650 111 0 0112234789999999888888665 8888
Q ss_pred EEEeCCCCceEEEEeccCCc-cccccCCCCCcccccccccccccccC--CCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1338 HVWNSQTGKLLSVFAEQSMD-SLHGGSPSSSISKINTDQVGMLNSNT--LSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~-~~~~~s~s~~~~~~~~~~~~~~~~~~--~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.++.+..-.+++.+...... ........+.-..+...+..-+..+. ....|....-+-..++|++++|||+.+|+|+
T Consensus 290 ~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~ 369 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA 369 (893)
T ss_pred EEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc
Confidence 99999988888877654222 11111111111111111111111111 1222332222344589999999999999999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.||.||+||..+|-|+.+|..|+ +.|++++|. ..|+.+++.|-||+||.||+......+++..
T Consensus 370 eDgKVKvWn~~SgfC~vTFteHt------s~Vt~v~f~-----------~~g~~llssSLDGtVRAwDlkRYrNfRTft~ 432 (893)
T KOG0291|consen 370 EDGKVKVWNTQSGFCFVTFTEHT------SGVTAVQFT-----------ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS 432 (893)
T ss_pred CCCcEEEEeccCceEEEEeccCC------CceEEEEEE-----------ecCCEEEEeecCCeEEeeeecccceeeeecC
Confidence 99999999999999999999764 458889986 5668999999999999999999998888874
Q ss_pred c-CCcEEEEE-eCCCCEEEEEeCCCc-EEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1495 H-DGYVTKLA-APEDHLLVSSSLDKT-LRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1495 H-~~~V~sva-spdg~~LaSgS~Dgt-I~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
- .....||+ .|.|.++..|+.|.. |.+|++++| +.+-.+.||.++|.+ |+|+|..|+|||.|+ |++||+-.+
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 3 34567788 888999999998864 999999999 677899999999995 999999999999999 999998632
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.++. ... .+...+.+++|.|||+.+|++.-||.|.+||
T Consensus 511 ---~~~v-----Etl------~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 511 ---SGTV-----ETL------EIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ---Ccee-----eeE------eeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 2221 111 2556799999999999999999999999997
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=281.63 Aligned_cols=277 Identities=18% Similarity=0.264 Sum_probs=239.0
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1309 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~ 1309 (1620)
+++.+|.. ||+|+.||.+++|+..|.++.+|..|.++|.+++|+.+|.+|+|||. |+++.+||..+|++.+
T Consensus 242 ~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 242 DWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHTGTVKQ 312 (524)
T ss_pred EecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccCceEEE
Confidence 37888876 99999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EEecCCcceeEEEEeeCCCeEEE-eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCe
Q 000355 1310 GYYGHEEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1388 (1620)
Q Consensus 1310 ~l~gH~~~V~sV~f~~~~~~laS-~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1388 (1620)
.+.-|+.+-.+|.|..++....+ .|+.|+|+.+....++.++.+|...
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~------------------------------- 361 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGE------------------------------- 361 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCc-------------------------------
Confidence 99999999889999766655533 3999999999988888888876422
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCE
Q 000355 1389 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1468 (1620)
Q Consensus 1389 ~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~ 1468 (1620)
|.++.|.|.|..|+++|.|+|+++|....+.+.+.+.+|.. .|..+.++|........ ..+..
T Consensus 362 ---------V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk------ei~t~~wsp~g~v~~n~--~~~~~ 424 (524)
T KOG0273|consen 362 ---------VNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK------EIYTIKWSPTGPVTSNP--NMNLM 424 (524)
T ss_pred ---------eEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc------ceeeEeecCCCCccCCC--cCCce
Confidence 66677777899999999999999999999988888886554 47888888766533222 45678
Q ss_pred EEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EE
Q 000355 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GF 1545 (1620)
Q Consensus 1469 LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--af 1545 (1620)
+++++.|++|++||+..|.++.++..|..+|.+|+ +|+|+++|+|+.||.|.+|+++++ +..+...+ ++.|. +|
T Consensus 425 l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~--~l~~s~~~-~~~Ifel~W 501 (524)
T KOG0273|consen 425 LASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG--KLVKSYQG-TGGIFELCW 501 (524)
T ss_pred EEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch--heeEeecC-CCeEEEEEE
Confidence 99999999999999999999999999999999999 999999999999999999999998 44445544 44566 69
Q ss_pred eecCCEEEEEeCCc-eEEEecc
Q 000355 1546 SVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1546 Spdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+.+|..|..+-.|+ +.|-|+.
T Consensus 502 n~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 502 NAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCCEEEEEecCCCceEEEec
Confidence 99999998887788 9888864
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=303.58 Aligned_cols=187 Identities=16% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+. .++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 468999999999999999999862 357889999887532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++|.+++.+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999985 99999983 45688999999999999999999985 799999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|+|||+++...... .....||..|+|||++.+..++.++|+|+.|++.
T Consensus 145 L~Dfg~~~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 192 (333)
T cd06650 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (333)
T ss_pred EeeCCcchhhhhhc-------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHH
Confidence 99999987431100 0112356778888877666666667777777543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=289.47 Aligned_cols=277 Identities=16% Similarity=0.260 Sum_probs=229.6
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1345 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg 1345 (1620)
-..+|..|.|.|+|+.|++|+. .|..-||+..+-.....++.|..+|.++.|++++..+.|+ ||.||+|+....
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~----SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQ----SGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN 170 (464)
T ss_pred cccceeeEEEcCCCceeEeecc----cccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh
Confidence 4557999999999999999997 7999999986544444567899999999999999999776 799999998754
Q ss_pred ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC
Q 000355 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425 (1620)
Q Consensus 1346 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~ 1425 (1620)
.. +.+..| +...|++++++|+...++++|+||+|+|||..
T Consensus 171 nV-k~~~ah---------------------------------------h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~ 210 (464)
T KOG0284|consen 171 NV-KIIQAH---------------------------------------HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR 210 (464)
T ss_pred hh-HHhhHh---------------------------------------hhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence 32 222211 11236677777789999999999999999999
Q ss_pred CCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-e
Q 000355 1426 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-A 1504 (1620)
Q Consensus 1426 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-s 1504 (1620)
..+.-..+.+|.- .|+++.|.+.. ..||+|+.|..|++||.++|+++.++.+|+..|.++. .
T Consensus 211 ~~kee~vL~GHgw------dVksvdWHP~k-----------gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~ 273 (464)
T KOG0284|consen 211 MPKEERVLRGHGW------DVKSVDWHPTK-----------GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN 273 (464)
T ss_pred CCchhheeccCCC------CcceeccCCcc-----------ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc
Confidence 8887777776644 48888887544 5899999999999999999999999999999999999 9
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eeec-CCEEEEEeCCc-eEEEeccCCCCCCCcceeecc
Q 000355 1505 PEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQ 1580 (1620)
Q Consensus 1505 pdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~ 1580 (1620)
+++++|+|+|.|..++++|+++. +.+.++++|...|++ |+|- ..++++|+.|+ |..|.+... .
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~-----~------ 340 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE-----E------ 340 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccc-----c------
Confidence 99999999999999999999966 778899999999996 6886 46778889999 999986410 0
Q ss_pred ceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1581 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1581 kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+-.. +.+|...|++++|+|-|.+|++|+.|.++|+|.
T Consensus 341 p~~~i--~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 341 PLGEI--PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cccCC--CcccccceeeeeccccceeEeecCCCcceeeec
Confidence 11111 126899999999999999999999999999994
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=284.85 Aligned_cols=280 Identities=14% Similarity=0.191 Sum_probs=232.9
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC----CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK----ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~----g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
.+.+..|++.||. ||++|++ |||||.|.+..+|++. -+..+++.||..+|..+.||||.++|++||.
T Consensus 217 ~qil~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~-- 289 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF-- 289 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc--
Confidence 4567889999996 9999998 9999999999999965 3468999999999999999999999999996
Q ss_pred CCCcEEEEEeCCCCeEEEEEe-cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~-gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
|..+++||+.||.+...+. +|...+.+++|.|++..+ +|.|+++..||+. |..+....+-.
T Consensus 290 --~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr------------- 353 (519)
T KOG0293|consen 290 --DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVR------------- 353 (519)
T ss_pred --hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccc-------------
Confidence 8899999999999988875 567999999999999988 4559999999986 44333332210
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
. ..|.+++.++||+++++.+.|..|++++..+......... ...|++
T Consensus 354 -------------------------~-~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise-------~~~its 400 (519)
T KOG0293|consen 354 -------------------------D-PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISE-------EQPITS 400 (519)
T ss_pred -------------------------c-ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccc-------cCceeE
Confidence 0 1377888899999999999999999999887655443332 334777
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE---EEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV---TKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V---~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
.+.+ .+|+++.+.-.+..+.+||+...+.++.+.||...- .++- --+..+++|||+|+.|+||+.
T Consensus 401 ~~iS-----------~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr 469 (519)
T KOG0293|consen 401 FSIS-----------KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHR 469 (519)
T ss_pred EEEc-----------CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEc
Confidence 7765 456799999999999999999989999999998764 3433 456679999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEEE--eec-CCEEEEEeCCc-eEEEecc
Q 000355 1525 RRNWPSQPTVFKGHTNGISGF--SVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~af--Spd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
.++ +.+.++.||+..|+|+ +|. ..++||||+|+ |++|...
T Consensus 470 ~sg--kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 470 ISG--KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred cCC--ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 999 7788999999999974 453 46799999999 9999875
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=297.30 Aligned_cols=148 Identities=16% Similarity=0.104 Sum_probs=127.8
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||.||+|.+. .+++.+|+|.+.......... ..+. +|+.+++.++|+||++++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3778899999999999999872 457899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+++||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999984 999998754455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 145 Dfg~~~ 150 (285)
T cd05630 145 DLGLAV 150 (285)
T ss_pred ecccee
Confidence 999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=295.06 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=120.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 191 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~ 191 (1620)
||+|+||.||++++. .+|+.+|+|.+.............. ..|++++++++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999999862 4578999999865332221111121 279999999999999999999999999
Q ss_pred EEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 192 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 192 ~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+|+||||++| +|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~ 143 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAV 143 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeee
Confidence 9999999985 999888754555688888999999999999999999999999999999999998 89999999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=298.27 Aligned_cols=147 Identities=21% Similarity=0.235 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. .+|..+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSAL--------REICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccchh--------HHHHHHHhcCCCCeeeHHH
Confidence 5889999999999999999962 4578899999875422221112222 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++.+.+.+++|+||++++|.+++.. ....+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 9999999999999999999998874 245689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 g~~~ 147 (284)
T cd07839 144 GLAR 147 (284)
T ss_pred chhh
Confidence 9987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=324.67 Aligned_cols=175 Identities=18% Similarity=0.147 Sum_probs=137.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+|+.|+|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 679999999999999999999972 4568899999876544444444444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCceE
Q 000355 183 LGLLKTS--GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 250 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-------gIiHRDLKP~NIL 250 (1620)
+++|... ..+||||||++ ++|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 9998654 57999999999 5999999742 235689999999999999999999984 5999999999999
Q ss_pred ecCCC---------------ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 251 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 251 l~~~~---------------~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
|+.+. ...+||+|||+++...... ....|.||+.|+|||++
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELL 213 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHH
Confidence 96531 1258999999998431110 01234467777777764
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=275.18 Aligned_cols=282 Identities=24% Similarity=0.419 Sum_probs=235.9
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE--EeCCcEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHV 1339 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la--S~DgtV~I 1339 (1620)
++++++|.++|.+++|+|+++++++|+. ||.|++|++.+++....+.+|...+.++.|.+++..++ +.||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4568899999999999999999999997 89999999999988889999999999999999987773 44999999
Q ss_pred EeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcE
Q 000355 1340 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1419 (1620)
Q Consensus 1340 WD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtV 1419 (1620)
||+.+++.+..+..+. ..+.++.++++++.+++++.|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~----------------------------------------~~i~~~~~~~~~~~~~~~~~~~~i 117 (289)
T cd00200 78 WDLETGECVRTLTGHT----------------------------------------SYVSSVAFSPDGRILSSSSRDKTI 117 (289)
T ss_pred EEcCcccceEEEeccC----------------------------------------CcEEEEEEcCCCCEEEEecCCCeE
Confidence 9999877666555331 125667777778888888889999
Q ss_pred EEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1420 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1420 rlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
++||+++++....+..| ...+.+++++ +++.++++++.||.|++||+++++.+..+..|...|
T Consensus 118 ~~~~~~~~~~~~~~~~~------~~~i~~~~~~-----------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 180 (289)
T cd00200 118 KVWDVETGKCLTTLRGH------TDWVNSVAFS-----------PDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180 (289)
T ss_pred EEEECCCcEEEEEeccC------CCcEEEEEEc-----------CcCCEEEEEcCCCcEEEEEccccccceeEecCcccc
Confidence 99999988888877744 3457888876 345788888889999999999999999999999999
Q ss_pred EEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcc
Q 000355 1500 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1575 (1620)
Q Consensus 1500 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1575 (1620)
.++. +++++.+++++.|+.|++||++++ .....+.+|...+.+ |++++.++++++.|+ |++|++.. +..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~-----~~~ 253 (289)
T cd00200 181 NSVAFSPDGEKLLSSSSDGTIKLWDLSTG--KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT-----GEC 253 (289)
T ss_pred ceEEECCCcCEEEEecCCCcEEEEECCCC--ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC-----cee
Confidence 9999 899999999999999999999886 455667788888885 888888999888677 99999862 211
Q ss_pred eeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1576 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1576 ~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
. .... .|...|.+++|+|+++.|++++.||.|++|+
T Consensus 254 ~------~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 254 V------QTLS---GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred E------EEcc---ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 1 1111 3677899999999999999999999999996
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=298.40 Aligned_cols=192 Identities=16% Similarity=0.210 Sum_probs=168.4
Q ss_pred CCeee--eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 104 TALFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 104 ~~y~~--~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.-|++ .+.||.|.||+||-|.++ .+|+.||||+|.+-+...++..+.. +|+.||+.++||.||.
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqesqlR--------~EVaILq~l~HPGiV~ 627 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQESQLR--------NEVAILQNLHHPGIVN 627 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchHHHHH--------HHHHHHHhcCCCCeeE
Confidence 34665 689999999999999873 5789999999998777665554444 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-eEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~~lK 260 (1620)
|...|++.+.++.|||.+.||+.++|-.+..+++++...++++.||+.||.|||.++|+|+||||||||+.+... .++|
T Consensus 628 le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvK 707 (888)
T KOG4236|consen 628 LECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVK 707 (888)
T ss_pred EEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCcee
Confidence 999999999999999999999888888788899999999999999999999999999999999999999976543 5899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+||..... .+.....|||.|.|||+++++.|+...|+|+.|.|.
T Consensus 708 lCDFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 708 LCDFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred eccccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 9999999954321 123456799999999999999999999999999886
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=299.96 Aligned_cols=145 Identities=18% Similarity=0.210 Sum_probs=124.6
Q ss_pred eeeceeee--eeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 108 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 108 ~~~~LG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
++++||+| +||+||++.+ ..+++.||+|.+...... ....++++ +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~------~~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARY------KPTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEee------cccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 46789999 7889999886 256899999999764333 23333443 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+..++..++||||++ |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++ .++++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 999999999999999 5999999754445689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|.+.
T Consensus 146 ~~~~ 149 (327)
T cd08227 146 RSNL 149 (327)
T ss_pred chhh
Confidence 8765
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=303.19 Aligned_cols=281 Identities=24% Similarity=0.401 Sum_probs=241.0
Q ss_pred eEEeecc-cCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1262 LSSIRAH-HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1262 l~tl~gH-~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
...+.+| ..+|.++.|+++|+.+++++. |+++++|+..+++ ....+.+|...|++++|+|++.+++++ |++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~----~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASS----DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccC----CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCce
Confidence 4556555 889999999999999999987 8999999998887 778889999999999999999988544 999
Q ss_pred EEEEeC-CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1337 LHVWNS-QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1337 V~IWD~-~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
|+|||+ ..+.+++++.+|.. .+++++|+|+|+.+++|+.
T Consensus 227 iriwd~~~~~~~~~~l~gH~~----------------------------------------~v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHST----------------------------------------YVTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred EEEeeccCCCeEEEEecCCCC----------------------------------------ceEEEEecCCCCEEEEecC
Confidence 999999 55688899987642 3677777888999999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc--EEEEEE
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWR 1493 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~--~i~~l~ 1493 (1620)
|++||+||+++++++..+.+|.. .|++++|. ++|+++++++.||.|++||+.++. ++..+.
T Consensus 267 D~tvriWd~~~~~~~~~l~~hs~------~is~~~f~-----------~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 329 (456)
T KOG0266|consen 267 DGTVRIWDVRTGECVRKLKGHSD------GISGLAFS-----------PDGNLLVSASYDGTIRVWDLETGSKLCLKLLS 329 (456)
T ss_pred CCcEEEEeccCCeEEEeeeccCC------ceEEEEEC-----------CCCCEEEEcCCCccEEEEECCCCceeeeeccc
Confidence 99999999999999999997654 58888886 667899999999999999999999 677888
Q ss_pred ccCCc--EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE-----EeecCCEEEEEeCCc-eEEEe
Q 000355 1494 AHDGY--VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1494 gH~~~--V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
++... ++++. +|++.++++++.|+++++||++.+ ..+....+|...+.| .++.++++++|+.|+ |.+|+
T Consensus 330 ~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~ 407 (456)
T KOG0266|consen 330 GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG--KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWD 407 (456)
T ss_pred CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC--cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEe
Confidence 77766 89999 999999999999999999999988 667788999887544 467899999999999 99999
Q ss_pred ccCCCCCCCcceeeccceeeecCCCCc-cccEEEEEEecCCCEEEEEe--CCCcEEEc
Q 000355 1565 LSKSADEDGQHRLVPQKLYMVDNGAKN-LSVLSSISILPFSRLFLVGT--EDGYLRLC 1619 (1620)
Q Consensus 1565 l~~~~~~~g~~~~~~~kl~~~~~g~~h-~~~V~svafsPdg~lLasgs--~DG~IrlW 1619 (1620)
++. +.. ..++ .+| ...+..++++|...++++++ .|+.|++|
T Consensus 408 ~~s-----~~~---~~~l------~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w 451 (456)
T KOG0266|consen 408 SSS-----GGI---LQRL------EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLW 451 (456)
T ss_pred CCc-----cch---hhhh------cCCCCCceeccccCCCcCeeeecCcCCCceEEEe
Confidence 862 211 1111 246 78899999999999999998 69999999
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=286.86 Aligned_cols=147 Identities=16% Similarity=0.122 Sum_probs=127.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh---HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~---~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+.|++.+.||+|+||.||+|.+. .+++.+|+|.+......... ...+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVNALE--------CEIQLLKNLQHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHHHHH--------HHHHHHHhCCCCCee
Confidence 46889999999999999999862 45788999998754332221 12222 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++..++.+++||||+++ +|.+.+.. ...+++..++.+++|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~ 143 (263)
T cd06625 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NV 143 (263)
T ss_pred eeEEEEccCCeEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 999999999999999999985 99999973 45688999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 ~l~dfg~~~ 152 (263)
T cd06625 144 KLGDFGASK 152 (263)
T ss_pred EEeecccce
Confidence 999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-30 Score=282.08 Aligned_cols=274 Identities=16% Similarity=0.253 Sum_probs=223.4
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCC
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1345 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg 1345 (1620)
-..+|.|+.+. ...++||.. |+||++||..+-.|++.+.||++.|.|+.|. .+.+ +|.|.||+|||+++|
T Consensus 196 ~skgVYClQYD--D~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEec--chhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 45679999985 457999998 9999999999999999999999999999984 3344 556999999999999
Q ss_pred ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC
Q 000355 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425 (1620)
Q Consensus 1346 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~ 1425 (1620)
+++.++-+|. ..|.-+.|+ +.+++++|.|.++++||+.
T Consensus 268 e~l~tlihHc------------------------------eaVLhlrf~------------ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 268 EPLNTLIHHC------------------------------EAVLHLRFS------------NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred chhhHHhhhc------------------------------ceeEEEEEe------------CCEEEEecCCceeEEEecc
Confidence 9998887652 335555555 4599999999999999998
Q ss_pred CCce---eEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1426 QGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1426 tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
.... .+.+.| |...|+.|.|+ .+++++++.|.+|++|++.|++.++++.||...|-|+
T Consensus 306 sps~it~rrVLvG------HrAaVNvVdfd-------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl 366 (499)
T KOG0281|consen 306 SPTDITLRRVLVG------HRAAVNVVDFD-------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 366 (499)
T ss_pred CchHHHHHHHHhh------hhhheeeeccc-------------cceEEEecCCceEEEEeccceeeehhhhcccccceeh
Confidence 7542 233444 45557777764 3799999999999999999999999999999998777
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccc
Q 000355 1503 AAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQK 1581 (1620)
Q Consensus 1503 aspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~k 1581 (1620)
. -.|++++|||.|.+|++||+..| .++..+.||.+-|.|+-.|.+.++||+.|| |+|||+.+..+ ... ....
T Consensus 367 Q-Yr~rlvVSGSSDntIRlwdi~~G--~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aald--pra--~~~~ 439 (499)
T KOG0281|consen 367 Q-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD--PRA--PAST 439 (499)
T ss_pred h-ccCeEEEecCCCceEEEEecccc--HHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccC--Ccc--cccc
Confidence 5 46899999999999999999999 778899999999999999999999999999 99999974322 111 1111
Q ss_pred eeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1582 LYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1582 l~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+ ....-..|.+.|..+.| |...+++++.|.+|-|||
T Consensus 440 ~-Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 440 L-CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 475 (499)
T ss_pred h-HHHhhhhccceeEEEee--cceEEEeccCCCeEEEEE
Confidence 1 11111257888999999 678899999999999997
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-31 Score=333.52 Aligned_cols=177 Identities=19% Similarity=0.188 Sum_probs=146.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.-+|+...+||.|.||.||-|.+ ..+|+..|+|-++-............ +|..+|..|+|||+|++
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN------~~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVN------LDTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeec------CCccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCcccccc
Confidence 34788899999999999999986 47889999999876544433333333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|++-.+.+.++|.||||. |+|.+++. .++...|...+.|..|++.|+.|||+.|||||||||+||+++.+| .+|+
T Consensus 1300 yGVEvHRekv~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~ 1375 (1509)
T KOG4645|consen 1300 YGVEVHREKVYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKY 1375 (1509)
T ss_pred CceeecHHHHHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEe
Confidence 999999999999999999 59999998 455677778899999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
.|||.|+......+ ..+.......||+.|||||++.
T Consensus 1376 ~DFGsa~ki~~~~~-------~~~~el~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQ-------TMPGELQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred ecccceeEecCchh-------cCCHHHHhhcCCchhcCchhhc
Confidence 99999995543211 1111233556899999999863
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=257.38 Aligned_cols=275 Identities=25% Similarity=0.340 Sum_probs=227.9
Q ss_pred CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1259 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
.+.++.+..|.++|+++.|+-||++.++||. |++||+|+...|.+++++.||...|.+++.+.++..++|| |+.
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 3467889999999999999999999999998 9999999999999999999999999999999999999777 999
Q ss_pred EEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECC
Q 000355 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1416 (1620)
Q Consensus 1337 V~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~D 1416 (1620)
|.+||+.||+.++.+.+|... |+.++|+.+...+++|+.|
T Consensus 83 v~vwDV~TGkv~Rr~rgH~aq----------------------------------------VNtV~fNeesSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGHLAQ----------------------------------------VNTVRFNEESSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeecccccce----------------------------------------eeEEEecCcceEEEecccc
Confidence 999999999999999877422 4455555668899999999
Q ss_pred CcEEEEECCCC--ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1417 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1417 gtVrlwDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.++|+||.++. ++++.+... ...|.+|... +.-|++|+.||++|.||+|.|+......+
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~g 183 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYFG 183 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhcC
Confidence 99999999875 566666543 3346666643 36799999999999999999998877665
Q ss_pred cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE----EEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1495 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1495 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.+|+++. ++|++..+.++.|+++++-|-.++ +.+...+||.+.-. |++.....+++||.|| |.+||+..
T Consensus 184 --~pit~vs~s~d~nc~La~~l~stlrLlDk~tG--klL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd- 258 (307)
T KOG0316|consen 184 --HPITSVSFSKDGNCSLASSLDSTLRLLDKETG--KLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD- 258 (307)
T ss_pred --CcceeEEecCCCCEEEEeeccceeeecccchh--HHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc-
Confidence 5899999 999999999999999999999999 67788899987544 4777888999999999 99999862
Q ss_pred CCCCCcceeeccceeeecCCCCcccc-EEEEEEecCCCEEEEEeCCC
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSV-LSSISILPFSRLFLVGTEDG 1614 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~-V~svafsPdg~lLasgs~DG 1614 (1620)
+.. ..++. -+..+ |.+++++|.-.-|.++..-+
T Consensus 259 ----~~~---~sk~~------~~~~v~v~dl~~hp~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 259 ----ETQ---ISKLS------VVSTVIVTDLSCHPTMDDFITATGHG 292 (307)
T ss_pred ----cee---eeeec------cCCceeEEeeecccCccceeEecCCc
Confidence 221 11221 13334 89999999988777776443
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=291.33 Aligned_cols=148 Identities=16% Similarity=0.097 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.......... ..+. +|+++|+.++|+||++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMAL--------NEKQILEKVNSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHHH--------HHHHHHHHcCCcCceeEE
Confidence 3778899999999999999862 467899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~ 144 (285)
T cd05632 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999995 898888754455689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 Dfg~~~ 150 (285)
T cd05632 145 DLGLAV 150 (285)
T ss_pred cCCcce
Confidence 999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=273.12 Aligned_cols=145 Identities=22% Similarity=0.301 Sum_probs=122.3
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 177 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-Hp 177 (1620)
.+...++|++++++|+|.|++||.|.+ ..+.+.++||++++-+.. ... ||++||+.|+ ||
T Consensus 33 ~wg~~ddYeivrk~GRGKYSEVFeg~~------~~~~eK~ViKiLKPVkkk-----KIk--------REikIL~nL~gg~ 93 (338)
T KOG0668|consen 33 DWGNQDDYEIVRKVGRGKYSEVFEGIN------ITNNEKCVIKILKPVKKK-----KIK--------REIKILQNLRGGP 93 (338)
T ss_pred eccccchHHHHHHHcCccHhhHhcccc------cCCCceEEEeeechHHHH-----HHH--------HHHHHHHhccCCC
Confidence 344578999999999999999999885 345677888888763321 222 9999999997 99
Q ss_pred cccceeeEEEeCC--EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 178 NVAPVLGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 178 NIv~l~~~~~~~~--~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
|||+|+++..++. ...||+||.+. |...+.. .++..+++++++|+++||.|||++||+|||+||.|+|||..
T Consensus 94 NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 94 NIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE 168 (338)
T ss_pred CeeehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence 9999999998765 67899999996 5555443 57889999999999999999999999999999999999987
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
.. .++|+|.|+|.
T Consensus 169 ~r-kLrlIDWGLAE 181 (338)
T KOG0668|consen 169 LR-KLRLIDWGLAE 181 (338)
T ss_pred hc-eeeeeecchHh
Confidence 63 89999999998
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=290.42 Aligned_cols=147 Identities=24% Similarity=0.270 Sum_probs=129.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5899999999999999999862 3578999999876543333333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++..++.+++||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 99999999999999977999999743 35689999999999999999999999999999999999999988 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 g~~~ 147 (286)
T cd07832 144 GLAR 147 (286)
T ss_pred eecc
Confidence 9987
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=291.70 Aligned_cols=148 Identities=20% Similarity=0.237 Sum_probs=127.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+|++.+.||+|+||.||+|.+. .+++.||+|.+....... ....... .+|+++++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 5888999999999999999862 357899999997654331 1111112 289999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+.+.+++||||+.++|.+++... ...+++..++.++.||++||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 9999999999999999988999999842 23689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 dfg~~~ 150 (298)
T cd07841 145 DFGLAR 150 (298)
T ss_pred cceeee
Confidence 999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=291.56 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=129.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+.++.||+|+||.||+|.+. .+++.+|||.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4889999999999999999862 3578999999865432222222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++.+++..++||||++++|.+++...+...+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999998999999865667789999999999999999999999999999999999999999 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 145 g~~~ 148 (284)
T cd07860 145 GLAR 148 (284)
T ss_pred cchh
Confidence 9987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-29 Score=299.01 Aligned_cols=147 Identities=22% Similarity=0.364 Sum_probs=126.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.||+|.+.... .......+. +|+.+++.++||||++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~ 67 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFE-HQTFCQRTL--------REIKILRRFKHENIIG 67 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEecccc-cchhHHHHH--------HHHHHHHhCCCCCcCc
Confidence 3578999999999999999999862 467899999986421 112223333 8999999999999999
Q ss_pred eeeEEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++...+ .+|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hhheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-
Confidence 999876543 589999999999998886 45689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 144 -~~kl~dfg~~~ 154 (336)
T cd07849 144 -DLKICDFGLAR 154 (336)
T ss_pred -CEEECccccee
Confidence 89999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=282.13 Aligned_cols=148 Identities=24% Similarity=0.225 Sum_probs=127.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|++++.||+|+||.||++.+. .+++.+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 5899999999999999999862 3467899999876433333333343 8999999999999999999
Q ss_pred EEEeC-CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 185 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 185 ~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88754 478999999984 999999854456689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 df~~~~ 150 (257)
T cd08223 145 DLGIAR 150 (257)
T ss_pred cccceE
Confidence 999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=301.78 Aligned_cols=200 Identities=18% Similarity=0.160 Sum_probs=164.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccE-EEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+.....+.||+|+||+||++.. .|.. ||||++...........+|. +|+.+|.+++|||||++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~f 104 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQF 104 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 3455667799999999999883 4566 99999987655554444555 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~l 259 (1620)
+|++..+. .++|||||++ |+|.+++....+..++...+..++.||++||.|||+++ ||||||||+|||++.++ .++
T Consensus 105 ~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~~ 183 (362)
T KOG0192|consen 105 YGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KTL 183 (362)
T ss_pred EEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CEE
Confidence 99999888 7999999999 69999998544678899999999999999999999999 99999999999999985 389
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc--ccccccccccccccccchHHHHhhhhcc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
||+|||+++...... ...+...||..|||||++. ...|+.++|+|+.|.+. ||.++.-.+|
T Consensus 184 KI~DFGlsr~~~~~~-----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl-WEl~t~~~Pf 246 (362)
T KOG0192|consen 184 KIADFGLSREKVISK-----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL-WELLTGEIPF 246 (362)
T ss_pred EECCCccceeecccc-----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH-HHHHHCCCCC
Confidence 999999998533211 0122245899999999999 66999999999999554 5555544333
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=289.55 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=129.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.||+|.+....... ....+. +|+++++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 678999999999999999999862 356889999987543221 112222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 9999999999999999999999998743 34678999999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 dfg~~~ 151 (291)
T cd07844 146 DFGLAR 151 (291)
T ss_pred cccccc
Confidence 999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-28 Score=286.28 Aligned_cols=357 Identities=17% Similarity=0.204 Sum_probs=274.0
Q ss_pred hcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc-eeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1216 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1216 ~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~-~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
....++.||+..|.. |+..|.. |+|||.|+.|.+||+-++ -+..|+||.+.|+..-|..+.++++|.|.
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~r-----laSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sK--- 169 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTR-----LASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSK--- 169 (888)
T ss_pred ceeeeecccccceEEEEEcccCce-----EeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEecc---
Confidence 456788999999995 7777765 999999999999998744 67889999999999999998899999998
Q ss_pred CCcEEEEEeCCCCe------------------------------------------------------------------
Q 000355 1293 FKGTVQKWELTRIN------------------------------------------------------------------ 1306 (1620)
Q Consensus 1293 ~DgtVrLWdl~tg~------------------------------------------------------------------ 1306 (1620)
|+.|++||+++..
T Consensus 170 -Ds~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i 248 (888)
T KOG0306|consen 170 -DSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREI 248 (888)
T ss_pred -CceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCcee
Confidence 8999999973310
Q ss_pred --------------------------------------------------------------------------------
Q 000355 1307 -------------------------------------------------------------------------------- 1306 (1620)
Q Consensus 1307 -------------------------------------------------------------------------------- 1306 (1620)
T Consensus 249 ~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv 328 (888)
T KOG0306|consen 249 NLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDV 328 (888)
T ss_pred EEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEE
Confidence
Q ss_pred ------------------EE------------------EEEecCCcceeEEEEeeCCCeEEEe-CCcEEEEeCCCCceEE
Q 000355 1307 ------------------CV------------------SGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLS 1349 (1620)
Q Consensus 1307 ------------------~l------------------~~l~gH~~~V~sV~f~~~~~~laS~-DgtV~IWD~~tg~~i~ 1349 (1620)
+. -++.||...|.+++++.+...++|+ .+.++||+..+.+|++
T Consensus 329 ~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciR 408 (888)
T KOG0306|consen 329 TPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIR 408 (888)
T ss_pred EecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeE
Confidence 00 1234688889999988877777887 7899999999999999
Q ss_pred EEeccCCccccccCCCCCcccccccc----------cccc-cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1350 VFAEQSMDSLHGGSPSSSISKINTDQ----------VGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1350 ~l~~~~~~~~~~~s~s~~~~~~~~~~----------~~~~-~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
++.....- .....|.+...+..... ...+ ....|.+.++++ +.+||+..+++||.|.+
T Consensus 409 Ti~~~y~l-~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi----------~~~pD~~g~vT~saDkt 477 (888)
T KOG0306|consen 409 TITCGYIL-ASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSI----------SLSPDNKGFVTGSADKT 477 (888)
T ss_pred EeccccEE-EEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeee----------eecCCCCceEEecCCcE
Confidence 98754211 11111222111111111 1111 111345555544 45567999999999999
Q ss_pred EEEEECCC-----CceeEEeeC-CCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1419 LRFIDINQ-----GQKLHLWRG-EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1419 VrlwDl~t-----g~~l~~l~~-~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|++||..- |...+.+.- |.........|.|+.++ |||+++|+|--|++|++|=+.+-+..-++
T Consensus 478 VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S-----------pdgk~LaVsLLdnTVkVyflDtlKFflsL 546 (888)
T KOG0306|consen 478 VKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS-----------PDGKLLAVSLLDNTVKVYFLDTLKFFLSL 546 (888)
T ss_pred EEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc-----------CCCcEEEEEeccCeEEEEEecceeeeeee
Confidence 99999742 222222222 22333456678888775 78899999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
-||.=||.|+. +||+++++|||.|++|+||-+.=| .+-..+-+|.++|.+ |-|+...+.|+|.|+ |+-||-.+
T Consensus 547 YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k- 623 (888)
T KOG0306|consen 547 YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK- 623 (888)
T ss_pred cccccceeEEeccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh-
Confidence 99999999999 999999999999999999998877 556688899999997 999999999999999 99999541
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. ...+++ .+|.+.|++++.+|+|.+++++|.|.+||+|
T Consensus 624 --F-----e~iq~L------~~H~~ev~cLav~~~G~~vvs~shD~sIRlw 661 (888)
T KOG0306|consen 624 --F-----EEIQKL------DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW 661 (888)
T ss_pred --h-----hhheee------ccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence 0 112222 2589999999999999999999999999999
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=282.59 Aligned_cols=276 Identities=18% Similarity=0.319 Sum_probs=230.9
Q ss_pred ceeccCCCCCCCCCCeEEEEcCCCCEEEEeCCC-ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC
Q 000355 1227 WFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1305 (1620)
Q Consensus 1227 ~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~g-~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg 1305 (1620)
.+-.+.|+|+. |++|+..|...+|+... ..-..+++|..+|+++.|+++|.+++||+. ||.|++|+..-.
T Consensus 100 ~~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqpnmn 170 (464)
T KOG0284|consen 100 NVVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQPNMN 170 (464)
T ss_pred eeEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEecccchh
Confidence 33458999997 99999999999999752 233446789999999999999999999998 899999998643
Q ss_pred eEEEEEecCC-cceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccccccccc
Q 000355 1306 NCVSGYYGHE-EVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382 (1620)
Q Consensus 1306 ~~l~~l~gH~-~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1382 (1620)
.++.+++|. ..|.+++|+|.+..+++| ||+|+|||....+....+.+|..+
T Consensus 171 -nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwd------------------------- 224 (464)
T KOG0284|consen 171 -NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWD------------------------- 224 (464)
T ss_pred -hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCC-------------------------
Confidence 344555555 999999999998888554 999999999988877777766422
Q ss_pred CCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcc
Q 000355 1383 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1462 (1620)
Q Consensus 1383 ~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~ 1462 (1620)
|.|++|+|....+++|+.|+.|++||.++|+|+.++.+|.. .|.++.|.
T Consensus 225 ---------------VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKn------tVl~~~f~---------- 273 (464)
T KOG0284|consen 225 ---------------VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKN------TVLAVKFN---------- 273 (464)
T ss_pred ---------------cceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccc------eEEEEEEc----------
Confidence 67888888899999999999999999999999998886554 47888875
Q ss_pred cCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC
Q 000355 1463 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540 (1620)
Q Consensus 1463 ~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1540 (1620)
++++||+++|.|..++++|+|+-+.+.++++|+..|++++ +| +..+|.||+.||.|..|.+....+ ....-.+|..
T Consensus 274 -~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p-~~~i~~AHd~ 351 (464)
T KOG0284|consen 274 -PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP-LGEIPPAHDG 351 (464)
T ss_pred -CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc-ccCCCccccc
Confidence 6678999999999999999999999999999999999999 66 566999999999999999984421 2223357888
Q ss_pred CEEE--EeecCCEEEEEeCCc-eEEEeccCCCC
Q 000355 1541 GISG--FSVWGQDVISISNNK-IGLSSLSKSAD 1570 (1620)
Q Consensus 1541 ~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~ 1570 (1620)
.|.+ +.|-|..|++|+.|+ +++|.-.++.+
T Consensus 352 ~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 352 EIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred ceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence 9985 889999999999999 99999765543
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=270.21 Aligned_cols=278 Identities=23% Similarity=0.407 Sum_probs=239.5
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCc
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1295 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1295 (1620)
.++.+|.+.|.+ ++|++.+ +++++.|+.+++|++. +.....+.+|...+.++.|+++++.+++++. |+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~ 73 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DK 73 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CC
Confidence 346689999986 8888876 9999999999999998 6678889999999999999999999999997 89
Q ss_pred EEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE-Ee-CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccc
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA-SC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1296 tVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la-S~-DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
.|++||+.+++.+..+.+|...|.+++|++++..++ +. ||.|++||+.+++....+..+.
T Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------------ 135 (289)
T cd00200 74 TIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT------------------ 135 (289)
T ss_pred eEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC------------------
Confidence 999999999888999999999999999999877774 33 9999999999888776665321
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
..++++.+++++..+++++.|+.|++||+++++.+..+..+. ..+.+++++
T Consensus 136 ----------------------~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~- 186 (289)
T cd00200 136 ----------------------DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT------GEVNSVAFS- 186 (289)
T ss_pred ----------------------CcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCc------cccceEEEC-
Confidence 125667777778888888889999999999998888877543 347778775
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
++++.+++++.||.|++||+++++.+..+.+|...|.++. ++++.++++++.||.|++||+.++ ...
T Consensus 187 ----------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~--~~~ 254 (289)
T cd00200 187 ----------PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG--ECV 254 (289)
T ss_pred ----------CCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc--eeE
Confidence 5567899999999999999999999999988999999999 888889999988999999999876 556
Q ss_pred eEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1533 TVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1533 ~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
..+.+|...|.+ |+++++.+++++.|+ |++|+
T Consensus 255 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 255 QTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 677889888885 888899999999999 99996
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=298.19 Aligned_cols=148 Identities=23% Similarity=0.353 Sum_probs=127.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.||+|++............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 478999999999999999999862 4578999999876432222223333 89999999999999999
Q ss_pred eeEEEe----CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 183 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 183 ~~~~~~----~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++|.. ...+++||||+.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 34789999999999999987 345689999999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 146 ~kl~dfg~~~ 155 (334)
T cd07855 146 LRIGDFGMAR 155 (334)
T ss_pred EEecccccce
Confidence 9999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=292.02 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=127.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+|++.+.||+|+||.||+|.+.. ...+..+|+|.+.......... ... .+|+.+++.++||||++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~~~ 68 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQSA--------CREIALLRELKHENVVSLV 68 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHHH--------HHHHHHHHhcCCCCccceE
Confidence 58899999999999999999622 1257899999998743222221 222 2899999999999999999
Q ss_pred eEEEeC--CEEEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC----C
Q 000355 184 GLLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----S 254 (1620)
Q Consensus 184 ~~~~~~--~~~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~----~ 254 (1620)
+++... +.+++||||++++|.+++.... ...+++..++.++.||+.||.|||+++|+||||||+|||++. +
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 69 EVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred EEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCcc
Confidence 999988 7899999999999988886422 236889999999999999999999999999999999999998 7
Q ss_pred CceEEEEeecCCccc
Q 000355 255 CWSWLYICDKPLVGF 269 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~ 269 (1620)
+ .+||+|||+++.
T Consensus 149 ~--~~kl~Dfg~~~~ 161 (316)
T cd07842 149 G--VVKIGDLGLARL 161 (316)
T ss_pred c--eEEECCCccccc
Confidence 7 899999999883
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=305.82 Aligned_cols=213 Identities=15% Similarity=0.173 Sum_probs=165.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.||||++.+.........+.++ +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999862 46789999998654322222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcc--------cCCCCCC----------------------------ccceecccccCccchhhhccccc
Q 000355 263 DKPLVGFNSIADWC--------TIPTSPM----------------------------IGCCIEGCSSQGLYADLKLSQSM 306 (1620)
Q Consensus 263 DFGla~~~~~~~~~--------~~~~~~~----------------------------~~~~~~~~~gt~~Y~APEv~~~~ 306 (1620)
|||+|+........ ....... .........||+.|||||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999732111000 0000000 00001124589999999999999
Q ss_pred ccccccccccccccchHHHHhhhhcccC
Q 000355 307 DWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 307 ~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
.|+.++|+|+.|++. |+++++..+|.+
T Consensus 224 ~~~~~~DiwSlGvil-~elltG~~Pf~~ 250 (377)
T cd05629 224 GYGQECDWWSLGAIM-FECLIGWPPFCS 250 (377)
T ss_pred CCCCceeeEecchhh-hhhhcCCCCCCC
Confidence 999999999999887 666665555443
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=281.03 Aligned_cols=184 Identities=19% Similarity=0.264 Sum_probs=140.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.-++.+|.|+- .|-.|-|. -.++.||+|++..........+ ++.+|..++..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~ak--------ra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHAK--------RAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccch--------hhhhhhhhhhhhcccceeee
Confidence 558999999999998 56555542 3468899998865433322222 34599999999999999999
Q ss_pred eeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 183 LGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 183 ~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+.+|.-.. .+|+|||+|..+|.+.+. -.+....++++++|+++|++|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 99997543 789999999999999987 2456778899999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 319 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~ 319 (1620)
.+||.|||+|+..... ..++.+..|.+|+|||++.+..|.+.+|+|+.||
T Consensus 156 -~lKi~dfg~ar~e~~~------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGc 205 (369)
T KOG0665|consen 156 -TLKILDFGLARTEDTD------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 205 (369)
T ss_pred -heeeccchhhcccCcc------------cccCchhheeeccCchheeccCCcccchhhhhhh
Confidence 8999999999932110 1234455677788887765433333333333333
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=288.77 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=129.9
Q ss_pred cccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcc
Q 000355 98 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 177 (1620)
Q Consensus 98 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp 177 (1620)
......++|++.+.||+|+||.||+|.+. .+++.||||.+............. ++|+++++.++||
T Consensus 6 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~ 71 (310)
T cd07865 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITA--------LREIKILQLLKHE 71 (310)
T ss_pred cccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHH--------HHHHHHHHhCCCC
Confidence 44556789999999999999999999862 367899999986543222211222 2899999999999
Q ss_pred cccceeeEEEeCC--------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 178 NVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 178 NIv~l~~~~~~~~--------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
||+++++++...+ ..++||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 72 ~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~ni 150 (310)
T cd07865 72 NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI 150 (310)
T ss_pred CccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9999999987654 4699999999999998874 334689999999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcc
Q 000355 250 LLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~ 268 (1620)
|++.++ .+||+|||+++
T Consensus 151 l~~~~~--~~kl~dfg~~~ 167 (310)
T cd07865 151 LITKDG--ILKLADFGLAR 167 (310)
T ss_pred EECCCC--cEEECcCCCcc
Confidence 999998 89999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=286.98 Aligned_cols=147 Identities=20% Similarity=0.286 Sum_probs=125.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.+|+|++..........+.+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 47999999999999999999862 3578999999875432222222233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+.+++||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999997 5555554 344689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 143 dfg~~~ 148 (286)
T cd07847 143 DFGFAR 148 (286)
T ss_pred ccccce
Confidence 999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=296.50 Aligned_cols=149 Identities=27% Similarity=0.393 Sum_probs=128.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...+|++.+.||+|+||.||+|++. .++..||||.+.............. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999862 4678999999875322222223333 8999999999999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++... ..+|+||||++++|.+++. ..+.+++..++.++.|++.||.|||+++++||||||+|||++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~- 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC- 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-
Confidence 99988654 3589999999999999997 456789999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 146 -~~kL~Dfg~~~ 156 (337)
T cd07858 146 -DLKICDFGLAR 156 (337)
T ss_pred -CEEECcCcccc
Confidence 89999999987
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=304.03 Aligned_cols=215 Identities=14% Similarity=0.165 Sum_probs=169.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||+||+|.+. .+++.+|+|++.+...........++ +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999862 45789999999764322222222232 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc--------CCC---------CC-------CccceecccccCccchhhhccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCT--------IPT---------SP-------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 263 DFGla~~~~~~~~~~--------~~~---------~~-------~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|||+++......... ... .. ..........||+.|||||++.+..|+.++|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 999998532211000 000 00 000001234579999999999999999999999999
Q ss_pred ccchHHHHhhhhcccCCC
Q 000355 319 ELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gRs 336 (1620)
++. |+++++..+|.+.+
T Consensus 224 vil-~ell~G~~Pf~~~~ 240 (363)
T cd05628 224 VIM-YEMLIGYPPFCSET 240 (363)
T ss_pred HHH-HHHHhCCCCCCCCC
Confidence 887 77777766665544
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=278.98 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=130.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+. .+++.+++|.+............+. +|+++++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 4888999999999999999862 4578999999876444444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++..|+||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999985 999999865456788999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 f~~~~ 149 (256)
T cd08529 145 LGVAK 149 (256)
T ss_pred cccce
Confidence 99987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=304.27 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=168.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|++. .+++.+|+|.+...........+.+. +|+++++.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 6899999999999999999862 45789999998754322222222222 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.|.+++.+|+|||||+| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999985 9999997 345789999999999999999999999999999999999999999 899999
Q ss_pred cCCcccCCCCCccc--C--------------C--------------------CCCCccceecccccCccchhhhcccccc
Q 000355 264 KPLVGFNSIADWCT--I--------------P--------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 307 (1620)
Q Consensus 264 FGla~~~~~~~~~~--~--------------~--------------------~~~~~~~~~~~~~gt~~Y~APEv~~~~~ 307 (1620)
||+|+......... . . ......+......||+.|||||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 99986321100000 0 0 0000001112345899999999999999
Q ss_pred cccccccccccccchHHHHhhhhcccCCC
Q 000355 308 WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 308 y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+.++|+|+.|++. |+++++..+|.+++
T Consensus 225 ~~~~~DiwSlGvil-~elltG~~Pf~~~~ 252 (382)
T cd05625 225 YTQLCDWWSVGVIL-YEMLVGQPPFLAQT 252 (382)
T ss_pred CCCeeeEEechHHH-HHHHhCCCCCCCCC
Confidence 99999999999887 77777776666554
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=288.70 Aligned_cols=146 Identities=17% Similarity=0.233 Sum_probs=126.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++.+. .++..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLE-IKPAIRNQII--------RELKVLHECNSPYIVGFY 65 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEeccc-cCHHHHHHHH--------HHHHHHHhCCCCCCCeEE
Confidence 46999999999999999999862 45688999998653 2222223344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++|..++.+++||||++| +|.++++. .+.+++..++.++.|++.||.|||+ ++|+||||||+|||++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l 141 (308)
T cd06615 66 GAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKL 141 (308)
T ss_pred EEEeeCCEEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEE
Confidence 999999999999999985 99999983 4668899999999999999999998 6999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 142 ~dfg~~~ 148 (308)
T cd06615 142 CDFGVSG 148 (308)
T ss_pred ccCCCcc
Confidence 9999886
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=285.60 Aligned_cols=147 Identities=23% Similarity=0.284 Sum_probs=128.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++.+. .+++.+|+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCccce
Confidence 47999999999999999999862 35789999998754332222 22333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++ ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 142 (290)
T cd05580 67 YGSFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKI 142 (290)
T ss_pred eeEEEcCCeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEE
Confidence 999999999999999996 699999983 46789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 143 ~dfg~~~ 149 (290)
T cd05580 143 TDFGFAK 149 (290)
T ss_pred eeCCCcc
Confidence 9999987
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=289.14 Aligned_cols=150 Identities=25% Similarity=0.243 Sum_probs=129.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 3568999999999999999999862 3578899999976433322122223 8999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 182 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++... +..|+||||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99999887 899999999999999998743 34689999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 146 ~l~d~g~~~ 154 (293)
T cd07843 146 KICDFGLAR 154 (293)
T ss_pred EEeecCcee
Confidence 999999887
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=278.52 Aligned_cols=212 Identities=17% Similarity=0.217 Sum_probs=173.2
Q ss_pred CCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.+-|++ .+.||+|+||.|.-|.+ +.++..+|||++.+. ........ +||++++..+ .|+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~Rv--------fREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRSRV--------FREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHHHH--------HHHHHHHHHhcCCccHH
Confidence 455665 58999999999998885 467899999999875 33322333 4999999888 499999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-eE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 258 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~~ 258 (1620)
+|+++|++++.+|||||.|.| .|...|. +...++|.++..++++|+.||+|||.+||.||||||+|||-..... ..
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999995 9999998 5778999999999999999999999999999999999999865543 47
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-----ccccccccccccccccchHHHHhhhhccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
+|||||.++.........+..+++.. .+.| |+..|||||+.. ...|++.||.|+.|.|. |-+|.++.+|.
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L---~tPv-GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl-YImLsGYpPFv 292 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPEL---LTPV-GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL-YIMLSGYPPFV 292 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccc---cCcc-cchhhcchhHHhhhccccccccccccHHHHHHHH-HHHHhCCCCcc
Confidence 89999999876544444443444433 3344 467899999753 56799999999999988 88888888888
Q ss_pred CCCC
Q 000355 334 GRRW 337 (1620)
Q Consensus 334 gRs~ 337 (1620)
|+.-
T Consensus 293 G~Cg 296 (463)
T KOG0607|consen 293 GHCG 296 (463)
T ss_pred CccC
Confidence 8764
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=287.29 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=125.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.||+|.+............+. +|+.+++.++ ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 46999999999999999999862 4578999999866432222223333 8999999995 6999999
Q ss_pred eeEEEeCCE-----EEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-
Q 000355 183 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 253 (1620)
Q Consensus 183 ~~~~~~~~~-----~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~- 253 (1620)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987765 89999999999999887432 245799999999999999999999999999999999999998
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 66 89999999987
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=273.86 Aligned_cols=283 Identities=18% Similarity=0.267 Sum_probs=232.5
Q ss_pred ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC---eEEEEEecCCcceeEEEEeeCCCeEEEe--C
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--D 1334 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg---~~l~~l~gH~~~V~sV~f~~~~~~laS~--D 1334 (1620)
...+.+..|++.|+-+.||++|++|||||. |.|+.+|++... +..+++.||..+|..|.|+|+++++.+| |
T Consensus 215 qt~qil~~htdEVWfl~FS~nGkyLAsaSk----D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~ 290 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGKYLASASK----DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD 290 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCeeEeeccC----CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch
Confidence 345778899999999999999999999998 899999997544 4478899999999999999999999655 8
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
..+++||+.+|.+...+.... +..+++.+|.|||..+++|+
T Consensus 291 e~~~lwDv~tgd~~~~y~~~~---------------------------------------~~S~~sc~W~pDg~~~V~Gs 331 (519)
T KOG0293|consen 291 EVLSLWDVDTGDLRHLYPSGL---------------------------------------GFSVSSCAWCPDGFRFVTGS 331 (519)
T ss_pred HheeeccCCcchhhhhcccCc---------------------------------------CCCcceeEEccCCceeEecC
Confidence 889999999999877664210 12267888889999999999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.|+++..||+. |+.+..|++... ..|.+++.. +||+++++.+.|..|++|+..+...+....
T Consensus 332 ~dr~i~~wdlD-gn~~~~W~gvr~-----~~v~dlait-----------~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis- 393 (519)
T KOG0293|consen 332 PDRTIIMWDLD-GNILGNWEGVRD-----PKVHDLAIT-----------YDGKYVLLVTVDKKIRLYNREARVDRGLIS- 393 (519)
T ss_pred CCCcEEEecCC-cchhhccccccc-----ceeEEEEEc-----------CCCcEEEEEecccceeeechhhhhhhcccc-
Confidence 99999999985 666777775432 346677664 678899999999999999998776654444
Q ss_pred cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE----EEeecC-CEEEEEeCCc-eEEEeccC
Q 000355 1495 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWG-QDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1495 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg-~~LaSgs~D~-I~vwdl~~ 1567 (1620)
-..+|+++. +.||+++++.=.+..|.+||++.. +.+..+.||+.+-. ||.-.. .+++|||.|+ |++|+..
T Consensus 394 e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~--~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~- 470 (519)
T KOG0293|consen 394 EEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN--KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI- 470 (519)
T ss_pred ccCceeEEEEcCCCcEEEEEcccCeeEEeecchh--hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc-
Confidence 457899999 999999999999999999999966 66678889987533 566544 7899999999 9999954
Q ss_pred CCCCCCcceeeccceeeecCCCCccccEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000355 1568 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1568 ~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg-~lLasgs~DG~IrlW 1619 (1620)
.| ++..+.. ||...|++|+|+|.. .+||+||+||+||||
T Consensus 471 ----sg-------kll~~Ls--GHs~~vNcVswNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 471 ----SG-------KLLAVLS--GHSKTVNCVSWNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred ----CC-------ceeEeec--CCcceeeEEecCCCCHHHhhccCCCCeEEEe
Confidence 33 3333333 489999999999977 679999999999999
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=279.60 Aligned_cols=281 Identities=12% Similarity=0.167 Sum_probs=240.4
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
++..|+++|-+ ++|...| +.++=..|++.|||.+ +..++++.-..-+|++.+|-+--+.+++||. |+.
T Consensus 8 k~~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~ 78 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQ 78 (794)
T ss_pred HhhccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----Cce
Confidence 34458899986 8999999 8999999999999998 7789999999999999999999999999997 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCC-ceEEEEeccCCccccccCCCCCcccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
|||++..|++.+.+|..|.+.|.+|+.+|...++ +|.|.+|++||...+ .|.++|.+|.
T Consensus 79 IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~------------------ 140 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHE------------------ 140 (794)
T ss_pred EEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcc------------------
Confidence 9999999999999999999999999999999988 556999999998754 6788888764
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
-.|.+++|.|+ |.+.++++|-|+||++|.+.+..+..++++|.. .|+||++-+
T Consensus 141 ------------HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHek------GVN~Vdyy~ 193 (794)
T KOG0276|consen 141 ------------HYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEK------GVNCVDYYT 193 (794)
T ss_pred ------------eEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecccc------CcceEEecc
Confidence 34667777776 788999999999999999999999999997765 489999864
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
.. +-.++++|++|.+|++||..|.+|++++.||..-|..+. +|.-.+++|||.||++|||+..+- +..
T Consensus 194 ~g---------dkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty--~lE 262 (794)
T KOG0276|consen 194 GG---------DKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY--KLE 262 (794)
T ss_pred CC---------CcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce--ehh
Confidence 32 235999999999999999999999999999999999999 999999999999999999998775 333
Q ss_pred eEeecCCCCEEEEe--ecCCEEEEEeCCceEEEec
Q 000355 1533 TVFKGHTNGISGFS--VWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1533 ~~l~gH~~~V~afS--pdg~~LaSgs~D~I~vwdl 1565 (1620)
.++.---..|.|+. ..+..++.|.+++..+..+
T Consensus 263 ~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~l 297 (794)
T KOG0276|consen 263 KTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKL 297 (794)
T ss_pred hhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEc
Confidence 45544456677765 5667788888777444443
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=280.84 Aligned_cols=149 Identities=17% Similarity=0.139 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+ .++..+|+|.+...........+.... ..+|+++|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYEK----LQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHHH----HHHHHHHHHhcCCCCEeeEee
Confidence 578899999999999999875 467889999987543222111111110 118999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+.+.+++||||++| +|.+++.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999985 99999973 45678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 146 fg~~~ 150 (265)
T cd06631 146 FGCAR 150 (265)
T ss_pred chhhH
Confidence 99987
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=287.03 Aligned_cols=150 Identities=19% Similarity=0.231 Sum_probs=127.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|++|.||+|.+. .+++.+|+|.+............+. +|+++++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999999862 3578899999865433222223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++..|+||||++++|.+.+.......+++..++.++.||+.||+|||++||+||||||+||+++.++. .+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcc
Confidence 9999999999999999999999887544445688888999999999999999999999999999999986442 799999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 147 fg~~~ 151 (294)
T PLN00009 147 FGLAR 151 (294)
T ss_pred ccccc
Confidence 99987
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=289.45 Aligned_cols=149 Identities=23% Similarity=0.308 Sum_probs=126.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+.............. +|+++++.++||||+++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITAL--------REIKILKKLKHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhHH--------HHHHHHHhcCCCCccch
Confidence 689999999999999999999862 4578899999865432222112222 89999999999999999
Q ss_pred eeEEEeC--------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~~--------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++... ..+++||||++++|...+.. ....+++..++.++.||++||.|||++||+||||||+|||++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~ 151 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ 151 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 9987543 35799999999999888863 34578999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 152 ~--~~~l~dfg~~~ 163 (311)
T cd07866 152 G--ILKIADFGLAR 163 (311)
T ss_pred C--CEEECcCccch
Confidence 9 89999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-28 Score=287.02 Aligned_cols=150 Identities=25% Similarity=0.298 Sum_probs=131.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhh
Confidence 37999999999999999999862 3578999999976543321 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..|+||||+.| +|.+++...+...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l 144 (316)
T cd05574 67 YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIML 144 (316)
T ss_pred eeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEE
Confidence 9999999999999999985 999999865556789999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||++..
T Consensus 145 ~dfg~~~~ 152 (316)
T cd05574 145 SDFDLSKQ 152 (316)
T ss_pred eecchhhc
Confidence 99999984
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=303.10 Aligned_cols=211 Identities=16% Similarity=0.161 Sum_probs=166.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|++++.||+|+||+||+|++. .+++.+|+|++.......... ..+. +|+.+|+.++||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~il~~l~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK--------AERDILAEADNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhcCCCCeeeeE
Confidence 5899999999999999999862 467899999997643332222 2333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+||||+.++ ++||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~ 143 (381)
T cd05626 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLT 143 (381)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEe
Confidence 999999999999999985 9999997 355689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc----------CC--------------------------CCCCccceecccccCccchhhhccccc
Q 000355 263 DKPLVGFNSIADWCT----------IP--------------------------TSPMIGCCIEGCSSQGLYADLKLSQSM 306 (1620)
Q Consensus 263 DFGla~~~~~~~~~~----------~~--------------------------~~~~~~~~~~~~~gt~~Y~APEv~~~~ 306 (1620)
|||+++......... .. ......+......||+.|||||++.+.
T Consensus 144 DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (381)
T cd05626 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK 223 (381)
T ss_pred eCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC
Confidence 999986321100000 00 000000111234689999999999999
Q ss_pred ccccccccccccccchHHHHhhhhcccC
Q 000355 307 DWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 307 ~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
.|+.++|+|+.|+|. |+++++..+|.+
T Consensus 224 ~~~~~~DiwSlG~il-~elltG~~Pf~~ 250 (381)
T cd05626 224 GYTQLCDWWSVGVIL-FEMLVGQPPFLA 250 (381)
T ss_pred CCCCccceeehhhHH-HHHHhCCCCCcC
Confidence 999999999999887 777766555543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-27 Score=252.80 Aligned_cols=277 Identities=16% Similarity=0.231 Sum_probs=221.7
Q ss_pred ccccccCCCceec--cCCC-CCCCCCCeEEEEcCCCCEEEEeCCC----ceeEEe-ecccCcEEEEEEccCCCEEEEecc
Q 000355 1218 TSNLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKA----SILSSI-RAHHGALRSVAVGQDECTVFTAGI 1289 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spd-g~~~~~~~lasgS~D~~i~lWd~~g----~~l~tl-~gH~~~V~svafspdg~~LaSgs~ 1289 (1620)
...+.||+++||. ++|. |.. |||||.|+.||+|+..+ .+...+ .+|+.+|++|+|+|.|++|++||
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS- 80 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS- 80 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee-
Confidence 3567899999985 7777 655 99999999999999883 244444 47999999999999999999999
Q ss_pred CCCCCcEEEEEeCCCC--eEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC---ceEEEEeccCCcccccc
Q 000355 1290 GPGFKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLHGG 1362 (1620)
Q Consensus 1290 d~~~DgtVrLWdl~tg--~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg---~~i~~l~~~~~~~~~~~ 1362 (1620)
||.++.||.-..+ +|+.++.||+..|.+|+|+.+|.+||+| |+.|-||.+..+ +|+..++.|..+
T Consensus 81 ---FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD----- 152 (312)
T KOG0645|consen 81 ---FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD----- 152 (312)
T ss_pred ---ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc-----
Confidence 6999999986644 7899999999999999999999999766 999999998755 456667666433
Q ss_pred CCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC---CCceeEEeeCCCcc
Q 000355 1363 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN---QGQKLHLWRGEPTE 1439 (1620)
Q Consensus 1363 s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~---tg~~l~~l~~~~~~ 1439 (1620)
|..+.|+|....|+++|.|++|++|+-. .-+++.++.+|..
T Consensus 153 -----------------------------------VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~- 196 (312)
T KOG0645|consen 153 -----------------------------------VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN- 196 (312)
T ss_pred -----------------------------------ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccc-
Confidence 3445566668899999999999999876 2367888887654
Q ss_pred cccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-ccCCcEEEEEeCCCCEEEEEeCCCc
Q 000355 1440 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLAAPEDHLLVSSSLDKT 1518 (1620)
Q Consensus 1440 v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH~~~V~svaspdg~~LaSgS~Dgt 1518 (1620)
.|.+++|. +.|..+++++.|++|+||-..+. +. -|+..+..++.. ...++|++.|+.
T Consensus 197 -----TVW~~~F~-----------~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~~Y~v~W~-~~~IaS~ggD~~ 254 (312)
T KOG0645|consen 197 -----TVWSLAFD-----------NIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRALYDVPWD-NGVIASGGGDDA 254 (312)
T ss_pred -----eEEEEEec-----------CCCceEEEecCCcceEeeeeccC-----cchhcccceEeeeec-ccceEeccCCCE
Confidence 58888886 56679999999999999997632 22 378899999844 558999999999
Q ss_pred EEEEECCCCCCCCCe-----EeecCCCCEEE--Eeec-CCEEEEEeCCc-eEEEecc
Q 000355 1519 LRIWDLRRNWPSQPT-----VFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1519 I~IWDl~~~~~~~~~-----~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
|+++.-......... .-..|...|++ +.|. ...|++|++|| |++|.+.
T Consensus 255 i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 255 IRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999987653211211 33468888886 7774 68899999999 9999864
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=287.27 Aligned_cols=320 Identities=18% Similarity=0.261 Sum_probs=250.8
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1308 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l 1308 (1620)
+|+|.-.| +.++=-.|.|++||.. +.++..+.+|.++|+.|+|+|++.+++|||. |-+|+||+.++.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 48899999 9999999999999999 8999999999999999999999999999997 899999999999999
Q ss_pred EEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCC
Q 000355 1309 SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1386 (1620)
Q Consensus 1309 ~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~ 1386 (1620)
.++.||-+.|..+.|++.-..+ ||.|.||+||+..+++|+..+.+|.
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn------------------------------- 135 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN------------------------------- 135 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc-------------------------------
Confidence 9999999999999999998888 5669999999999999999999874
Q ss_pred CeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-----------------eeCCCcc------cccC
Q 000355 1387 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------------WRGEPTE------LGFP 1443 (1620)
Q Consensus 1387 ~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-----------------l~~~~~~------v~~~ 1443 (1620)
+.|.|..|+|....++++|-|.+||+||+.--+..+. +-+.... .+|.
T Consensus 136 ---------HYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 136 ---------HYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred ---------eEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 3477777888899999999999999999853211000 0010000 1455
Q ss_pred CccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc--EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEE
Q 000355 1444 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1520 (1620)
Q Consensus 1444 ~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~ 1520 (1620)
..|+-++|.|.. .+|++|++|..|++|.....+ .+.+.+||.+.|.++- +|...+++|.|.|++|+
T Consensus 207 RGVNwaAfhpTl-----------pliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksir 275 (1202)
T KOG0292|consen 207 RGVNWAAFHPTL-----------PLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIR 275 (1202)
T ss_pred cccceEEecCCc-----------ceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEE
Confidence 668888887544 489999999999999987554 4667789999999999 99999999999999999
Q ss_pred EEECCCCCCCCCeEeecCCC--CEEEEeecCCEEEEEeCCceEEEeccCCCC---CCCcc--eeeccceee---------
Q 000355 1521 IWDLRRNWPSQPTVFKGHTN--GISGFSVWGQDVISISNNKIGLSSLSKSAD---EDGQH--RLVPQKLYM--------- 1584 (1620)
Q Consensus 1521 IWDl~~~~~~~~~~l~gH~~--~V~afSpdg~~LaSgs~D~I~vwdl~~~~~---~~g~~--~~~~~kl~~--------- 1584 (1620)
+||+... ..+.+++...+ ++.+..|..++++.|-+.|+.||.+++.-. ..+.. .+....++.
T Consensus 276 VwDm~kR--t~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~ 353 (1202)
T KOG0292|consen 276 VWDMTKR--TSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDT 353 (1202)
T ss_pred EEecccc--cceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccc
Confidence 9999887 55667755444 455788889999998888888888763211 11111 011111111
Q ss_pred ----ecCCCCccccEEEEEEecCCCEEEEEe
Q 000355 1585 ----VDNGAKNLSVLSSISILPFSRLFLVGT 1611 (1620)
Q Consensus 1585 ----~~~g~~h~~~V~svafsPdg~lLasgs 1611 (1620)
...+.....++.+++++|....+..++
T Consensus 354 ~v~~lr~~g~~~~~~~smsYNpae~~vlics 384 (1202)
T KOG0292|consen 354 AVASLRRPGTLWQPPRSLSYNPAENAVLICS 384 (1202)
T ss_pred eeEeccCCCcccCCcceeeeccccCeEEEEe
Confidence 111111235788999999887766664
|
|
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=281.24 Aligned_cols=148 Identities=15% Similarity=0.192 Sum_probs=126.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+.|++.+.||+|+||.||+|.+. .+++.+|+|.+..... ....+. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTGD---EEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCCc---cHHHHH--------HHHHHHHHhcCCCCeee
Confidence 457888999999999999999862 4578999999865322 122333 899999988 6999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99998753 468999999985 99999986555678999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCccc
Q 000355 255 CWSWLYICDKPLVGF 269 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~ 269 (1620)
+ .+||+|||+++.
T Consensus 148 ~--~~~l~Dfg~~~~ 160 (272)
T cd06637 148 A--EVKLVDFGVSAQ 160 (272)
T ss_pred C--CEEEccCCCcee
Confidence 8 899999999873
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=301.78 Aligned_cols=214 Identities=15% Similarity=0.175 Sum_probs=166.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++++.||+|+||.||+|++. .+++.+|+|.+.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLY 67 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 37999999999999999999962 45789999998653222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~ 143 (376)
T cd05598 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLT 143 (376)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc------------CCC--------------------CCCccceecccccCccchhhhccccccccc
Q 000355 263 DKPLVGFNSIADWCT------------IPT--------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310 (1620)
Q Consensus 263 DFGla~~~~~~~~~~------------~~~--------------------~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~ 310 (1620)
|||+|.......... ... .....+......||+.|||||++.+..|+.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 999985321100000 000 000001112346899999999999999999
Q ss_pred ccccccccccchHHHHhhhhcccCC
Q 000355 311 QFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 311 ~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
++|+|+.|++. |+++++..+|.+.
T Consensus 224 ~~DiwSlGvil-yell~G~~Pf~~~ 247 (376)
T cd05598 224 LCDWWSVGVIL-YEMLVGQPPFLAD 247 (376)
T ss_pred ceeeeecccee-eehhhCCCCCCCC
Confidence 99999999887 6666655555443
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=293.72 Aligned_cols=146 Identities=25% Similarity=0.298 Sum_probs=124.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+. .+++.||+|.+..... ...+.+. +|+++++.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 578999999999999999999862 4678999999866432 2223333 89999999999999999
Q ss_pred eeEEEeC--------------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 000355 183 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 248 (1620)
Q Consensus 183 ~~~~~~~--------------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 248 (1620)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9877654 3589999999999998886 3468899999999999999999999999999999999
Q ss_pred eEecCCCceEEEEeecCCcc
Q 000355 249 VLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 249 ILl~~~~~~~lKL~DFGla~ 268 (1620)
|+++.++. .+||+|||+++
T Consensus 145 ili~~~~~-~~kl~dfg~~~ 163 (342)
T cd07854 145 VFINTEDL-VLKIGDFGLAR 163 (342)
T ss_pred EEEcCCCc-eEEECCcccce
Confidence 99985442 78999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=300.55 Aligned_cols=211 Identities=16% Similarity=0.210 Sum_probs=165.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|++. .+++.||||++.............++ +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 47999999999999999999972 45789999999754322222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 99999999999999998 49999997 355789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccC---CC------------CCC------------ccceecccccCccchhhhcccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTI---PT------------SPM------------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 315 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~---~~------------~~~------------~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W 315 (1620)
|||+++.......... .. .+. .........||+.|||||++.+..|+.++|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999975322110000 00 000 00011123579999999999999999999999
Q ss_pred cccccchHHHHhhhhcc
Q 000355 316 WRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 316 ~~G~isnfeyL~~ln~~ 332 (1620)
+.|++. |+++++..+|
T Consensus 224 SlG~il-~el~~G~~Pf 239 (364)
T cd05599 224 SLGVIM-YEMLVGYPPF 239 (364)
T ss_pred cchhHH-HHhhcCCCCC
Confidence 999876 6665544443
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=278.73 Aligned_cols=205 Identities=18% Similarity=0.157 Sum_probs=173.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.+++|+.++.||+|+||+|.+|+. ..+++.+|+|++++.-...++.... .+.|-++|+..+||.+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rE------Kat~k~YAiKIlkKeviiakdEVAH-------TlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCRE------KATGKLYAIKILKKEVIIAKDEVAH-------TLTENRVLQNCRHPFLTS 232 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEee------cccCceeehhhhhhhheeehHHhhh-------hhhHHHHHHhccCcHHHH
Confidence 578999999999999999999985 2568999999998865554433322 248999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|...|++.+.+|+||||..| .|+-++. +...+++..+++|..+|+.||.|||+++||.||||.+|+|+|.+| ++|
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIK 308 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIK 308 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceE
Confidence 99999999999999999995 9988887 577899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
|+|||+++........ ..+.| |||.|.|||++....|+.++|+|..|.+. ||++++.-+|..+
T Consensus 309 itDFGLCKE~I~~g~t----------~kTFC-GTPEYLAPEVleDnDYgraVDWWG~GVVM-YEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 309 ITDFGLCKEEIKYGDT----------TKTFC-GTPEYLAPEVLEDNDYGRAVDWWGVGVVM-YEMMCGRLPFYNK 371 (516)
T ss_pred eeecccchhcccccce----------ecccc-CChhhcCchhhccccccceeehhhhhHHH-HHHHhccCccccc
Confidence 9999999943322111 12344 59999999999999999999999999765 7766655554443
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=284.40 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=129.2
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
......+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++|||
T Consensus 15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ 78 (296)
T cd06654 15 VGDPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPN 78 (296)
T ss_pred cCCcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCC
Confidence 3344679999999999999999999862 45788999998764332 223333 8999999999999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|+++++.+..+...|+||||+++ +|.+++. ...+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-- 153 (296)
T cd06654 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-- 153 (296)
T ss_pred EeeEEEEEEeCCEEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--
Confidence 99999999999999999999985 9999986 34578899999999999999999999999999999999999998
Q ss_pred EEEEeecCCcc
Q 000355 258 WLYICDKPLVG 268 (1620)
Q Consensus 258 ~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 154 ~~kl~dfg~~~ 164 (296)
T cd06654 154 SVKLTDFGFCA 164 (296)
T ss_pred CEEECccccch
Confidence 89999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=283.72 Aligned_cols=147 Identities=19% Similarity=0.213 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||++.+. .++..+|+|.+... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIE--SEEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeC--CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999999862 35788999998653 223334454 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+|+||||+++ +|.+++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99998874 245689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 145 ~d~g~~~ 151 (280)
T cd06611 145 ADFGVSA 151 (280)
T ss_pred ccCccch
Confidence 9999877
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=277.10 Aligned_cols=148 Identities=20% Similarity=0.168 Sum_probs=129.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .+++.+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999999862 4578899999875433333334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++||||+.+ +|.+++.......+++..+..++.|++.||.|||++|++|+||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999985 999999754445678999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 145 ~~~~~ 149 (256)
T cd08218 145 FGIAR 149 (256)
T ss_pred cccee
Confidence 99887
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=281.64 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=125.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|++.+.||+|+||.||++.+. .++..+++|.+... .......+. +|+++++.++||||+++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~ii~~~~ 69 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTK--SEEELEDYM--------VEIDILASCDHPNIVKLLD 69 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCC--CHHHHHHHH--------HHHHHHHHCCCCCeeeEEE
Confidence 4788899999999999999862 35678899998653 233344444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++..++||||+++ +|..++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~d 146 (282)
T cd06643 70 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLAD 146 (282)
T ss_pred EEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcc
Confidence 99999999999999995 88777763 345689999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 147 fg~~~ 151 (282)
T cd06643 147 FGVSA 151 (282)
T ss_pred ccccc
Confidence 99987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=275.78 Aligned_cols=148 Identities=22% Similarity=0.283 Sum_probs=131.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5899999999999999998862 4678899999876544444444555 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+.+.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999985 999999854456689999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 ~~~~~ 149 (256)
T cd08221 145 FGISK 149 (256)
T ss_pred CcceE
Confidence 99987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-28 Score=279.89 Aligned_cols=147 Identities=18% Similarity=0.191 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh----HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+|+..+.||+|+||.||++.+ ..+++.+|+|.+......... ...+. +|+++++.++||||+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~------~~~~~~~alk~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARD------VKTGTLMAVKQVTYVRNTSSEQEEVVEALR--------KEIRLMARLNHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEE------cCCCcEEEEEEeecccCCchhHHHHHHHHH--------HHHHHHHHcCCCcee
Confidence 478889999999999999986 245788999998754322211 22233 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++...+.+++||||++| +|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||+++.++. .+
T Consensus 67 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~ 143 (268)
T cd06630 67 RMLGATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RL 143 (268)
T ss_pred hhhceeccCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EE
Confidence 999999999999999999995 99999973 456889999999999999999999999999999999999987752 69
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 ~l~dfg~~~ 152 (268)
T cd06630 144 RIADFGAAA 152 (268)
T ss_pred EEccccccc
Confidence 999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=282.08 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=122.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFY 65 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 36888999999999999999862 457889999987542 222333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++..++||||+++ +|..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~ 137 (279)
T cd06619 66 GAFFVENRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLC 137 (279)
T ss_pred EEEEECCEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999996 66433 2357888999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 138 dfg~~~ 143 (279)
T cd06619 138 DFGVST 143 (279)
T ss_pred eCCcce
Confidence 999987
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=299.19 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=179.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|..++.+|+|+||.+++++++ .+...+++|.+...+......+... +|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A~--------~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSAI--------QEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHHH--------HHHHHHHhccCCCeeee
Confidence 678999999999999999998862 3456899999998776665544444 89999999999999999
Q ss_pred eeEEEeCCE-EEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~-~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.|+.|||+++|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999887 9999999995 999999977777899999999999999999999999999999999999999999 789
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|.|||+|+...... .....++|||.||.||++.+.+|+.+.|+|+.||+. ||++..-..|.+-.
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~-yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL-YEMCTLKPAFKASN 210 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchH-HHHHhcccccCccc
Confidence 99999999643221 123456799999999999999999999999999998 88888777766543
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=282.71 Aligned_cols=147 Identities=22% Similarity=0.268 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.+.|++++.||.|+||.||+|.+. .++..+++|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 467999999999999999999862 35788999998653 333344444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+..++.+|+||||++| +|..++.. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999996 78777753 345689999999999999999999999999999999999999888 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 152 ~dfg~~~ 158 (292)
T cd06644 152 ADFGVSA 158 (292)
T ss_pred ccCccce
Confidence 9999887
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=277.77 Aligned_cols=150 Identities=21% Similarity=0.225 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh---hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+..+. ..+|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLDA----LAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHHH----HHHHHHHHHhcCCCCeee
Confidence 4778899999999999999862 3467899998865433221 11111111 128999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++|++||||||+||+++.++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999985 9999997 346688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 147 l~dfg~~~ 154 (267)
T cd06628 147 ISDFGISK 154 (267)
T ss_pred ecccCCCc
Confidence 99999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=290.52 Aligned_cols=151 Identities=22% Similarity=0.287 Sum_probs=128.5
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.+...++|++++.||+|+||.||+|.+. .++..||||.+............+. +|+.+|+.++|||
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ 75 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHEN 75 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCC
Confidence 3445789999999999999999999862 4678999999865332222223333 8999999999999
Q ss_pred ccceeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 179 VAPVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 179 Iv~l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
|+++++++..+. .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 76 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~ 152 (343)
T cd07880 76 VIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN 152 (343)
T ss_pred ccceeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 999999997654 469999999889998886 34689999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCcc
Q 000355 253 DSCWSWLYICDKPLVG 268 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~ 268 (1620)
.++ .+||+|||+++
T Consensus 153 ~~~--~~kl~dfg~~~ 166 (343)
T cd07880 153 EDC--ELKILDFGLAR 166 (343)
T ss_pred CCC--CEEEeeccccc
Confidence 998 89999999987
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=283.20 Aligned_cols=148 Identities=17% Similarity=0.179 Sum_probs=128.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++.+. ..++.||+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeee
Confidence 36899999999999999999862 45688999998764322222 22333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+..++.+++||||++| +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l 142 (305)
T cd05609 67 FCSFETKRHLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKL 142 (305)
T ss_pred EEEEecCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEE
Confidence 9999999999999999985 99999973 45689999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (305)
T cd05609 143 TDFGLSKI 150 (305)
T ss_pred eeCCCccc
Confidence 99999883
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=284.16 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=128.2
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
....+|++++.||+|+||.||+|.+ ..++..||+|.+...... ....+. +|+.+++.++||||+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~------~~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~ 79 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAID------IATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIV 79 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEE------CCCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 3457899999999999999999986 246789999998754322 222333 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++..++..|+||||+++ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~ 154 (297)
T cd06656 80 NYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SV 154 (297)
T ss_pred eEEEEEecCCEEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999986 34578899999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 155 ~l~Dfg~~~ 163 (297)
T cd06656 155 KLTDFGFCA 163 (297)
T ss_pred EECcCccce
Confidence 999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=285.53 Aligned_cols=147 Identities=20% Similarity=0.302 Sum_probs=125.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. ..++.+|+|.+..........+.+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 46899999999999999999862 3478899999876433332223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ .|..+.. ....+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999997 6666555 234578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 143 dfg~~~ 148 (286)
T cd07846 143 DFGFAR 148 (286)
T ss_pred eeeeee
Confidence 999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=277.49 Aligned_cols=146 Identities=17% Similarity=0.127 Sum_probs=124.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh---hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|+..+.||+|+||.||+|.+. .++..+|+|.+........ ....+. +|+.+++.++||||++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 68 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE--------CEIQLLKNLQHERIVQ 68 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH--------HHHHHHHHcCCCCeee
Confidence 6888999999999999999862 4578999999865432221 122222 8999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++... ..++++|||+++ +|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~ 144 (266)
T cd06651 69 YYGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--N 144 (266)
T ss_pred EEEEEEcCCCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--C
Confidence 99998763 578999999985 9999997 345688999999999999999999999999999999999999988 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 145 ~~l~dfg~~~ 154 (266)
T cd06651 145 VKLGDFGASK 154 (266)
T ss_pred EEEccCCCcc
Confidence 9999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=273.53 Aligned_cols=149 Identities=21% Similarity=0.200 Sum_probs=129.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+..+.||+|+||.||+|.+. .++..+|+|.+............+. +|+++|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5899999999999999999862 3578899999876544444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999985 9999998544556899999999999999999999999999999999999986652 689999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 146 ~~~~~ 150 (256)
T cd08220 146 FGISK 150 (256)
T ss_pred CCCce
Confidence 99987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=278.00 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|++...... ....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPGD--DFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCccc--hHHHHH--------HHHHHHHhcCCCCeeee
Confidence 568999999999999999999862 45789999998653221 222233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+++||||+++ +|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999887 345689999999999999999999999999999999999999998 7999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 148 ~dfg~~~ 154 (267)
T cd06646 148 ADFGVAA 154 (267)
T ss_pred CcCccce
Confidence 9999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-28 Score=280.10 Aligned_cols=146 Identities=19% Similarity=0.220 Sum_probs=128.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.++... ......+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEP--GEDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCc--hhHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999999862 457889999986532 12222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+.+|+||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 456789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 148 ~dfg~~~ 154 (267)
T cd06645 148 ADFGVSA 154 (267)
T ss_pred Ccceeee
Confidence 9999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=288.97 Aligned_cols=150 Identities=23% Similarity=0.288 Sum_probs=127.5
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+...++|++.+.||+|+||.||+|.+. .+++.||+|++............+. +|+.+++.++||||
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i 78 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENV 78 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcc
Confidence 445689999999999999999999862 4578999999876433322233333 89999999999999
Q ss_pred cceeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 180 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 180 v~l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++++... ...|++++++.++|.++++ ...+++..++.++.||++||.|||++||+||||||+||+++.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred cceeeeeeecccccccccEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 9999998653 3578999999889998886 335889999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 156 ~~--~~kl~dfg~~~ 168 (345)
T cd07877 156 DC--ELKILDFGLAR 168 (345)
T ss_pred CC--CEEEecccccc
Confidence 99 89999999987
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=280.41 Aligned_cols=144 Identities=23% Similarity=0.250 Sum_probs=123.2
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccceee
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 184 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~~ 184 (1620)
|++.+.||+|+||.||+|.+. .++..+|+|.++....... .... ++|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~-~~~~--------~~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSLE-QVNN--------LREIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCch-hhhH--------HHHHHHHhhcCCCCCccceEE
Confidence 678899999999999999862 4578899999875422221 1222 27999998885 999999999
Q ss_pred EEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 185 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++.++ +.+++||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99988 89999999999999998874 2356899999999999999999999999999999999999999 7 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 142 dfg~~~ 147 (282)
T cd07831 142 DFGSCR 147 (282)
T ss_pred eccccc
Confidence 999987
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=281.35 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=127.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. ..+..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 46899999999999999999862 35789999998653 2223334444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+.+..++.+|+||||++| +|..++.... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999996 9988887321 2368999999999999999999997 6999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 144 l~dfg~~~ 151 (286)
T cd06622 144 LCDFGVSG 151 (286)
T ss_pred EeecCCcc
Confidence 99999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=290.44 Aligned_cols=147 Identities=23% Similarity=0.352 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. ..+..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5899999999999999999962 3478899999876432222233333 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+||||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998775 899999999999999997 345789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||++..
T Consensus 143 ~L~dfg~~~~ 152 (330)
T cd07834 143 KICDFGLARG 152 (330)
T ss_pred EEcccCceEe
Confidence 9999999883
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-29 Score=292.45 Aligned_cols=227 Identities=15% Similarity=0.162 Sum_probs=184.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
-|..++.||-|+||+|.+++. ..+...+|+|.+++...........++ .|-.||.+.+.+-||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 588999999999999999884 345788999999875544444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.|++++.+|+||||++| |+..+|- +.+.|.|..+|+|+.++.+|+++.|..|+|||||||+|||||.+| +|||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999995 9998887 578899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCc------c------cCCC-------------------CCCccceecccccCccchhhhccccccccccc
Q 000355 264 KPLVGFNSIADW------C------TIPT-------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 312 (1620)
Q Consensus 264 FGla~~~~~~~~------~------~~~~-------------------~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~ 312 (1620)
|||+........ . .... .....+.-....||+.|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999973322110 0 0000 00011223456799999999999999999999
Q ss_pred ccccccccchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 313 d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
|+|+.|.|. ||+|.+-.+|-..+.. -+||-|.-|-.
T Consensus 853 dwws~gvil-~em~~g~~pf~~~tp~-~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVIL-YEMLVGQPPFLADTPG-ETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHHH-HHHhhCCCCccCCCCC-cceeeeeehhh
Confidence 999999887 8888777666555543 37888888864
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=285.56 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=123.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~ 183 (1620)
+|++.+.||+|+||.||++.+... ..+..+|+|.+............+. +|+.+++++ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAET----SEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCC----CcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 588999999999999999996221 2267899999865322222223333 899999999 599999999
Q ss_pred eEEEeC----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 184 GLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 184 ~~~~~~----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+.+... ..+|++|||++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 975433 4689999999999999997 456789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 145 kl~Dfg~a~ 153 (332)
T cd07857 145 KICDFGLAR 153 (332)
T ss_pred EeCcCCCce
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=280.19 Aligned_cols=147 Identities=22% Similarity=0.259 Sum_probs=128.0
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|++|.||+|.+. .+|..+|+|++............+. +|+++++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 677899999999999999862 3678999999876433222223333 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+.+++..|+||||++++|.+++...+...+++..+..++.|++.||.|||+++++||||+|+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999999999999854445689999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 145 ~~~ 147 (283)
T cd07835 145 LAR 147 (283)
T ss_pred ccc
Confidence 987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=280.70 Aligned_cols=147 Identities=18% Similarity=0.218 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||+|++. .++..+|+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5899999999999999999962 45789999998764321 1122233 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999999887432 24589999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 144 ~g~~~ 148 (284)
T cd07836 144 FGLAR 148 (284)
T ss_pred cchhh
Confidence 99987
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=279.22 Aligned_cols=148 Identities=21% Similarity=0.280 Sum_probs=125.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHh-hccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++++. .+|+.||+|.++..... ....+++ .|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 47899999999999999999862 46899999998764322 2223333 56654 666789999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++.+|+||||++|+|.+++... ....+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998888642 335689999999999999999999997 999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 kl~dfg~~~ 152 (283)
T cd06617 144 KLCDFGISG 152 (283)
T ss_pred EEeeccccc
Confidence 999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=281.16 Aligned_cols=145 Identities=16% Similarity=0.156 Sum_probs=126.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||.|+||.||+|.+ ..+++.+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~------~~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAID------VATGQEVAIKQINLQKQP--KKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEE------cCCCcEEEEEEEecccCc--hHHHHH--------HHHHHHHhcCCCceeee
Confidence 45799999999999999999986 246789999998653222 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||+++ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9998886 33578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 157 ~dfg~~~ 163 (296)
T cd06655 157 TDFGFCA 163 (296)
T ss_pred ccCccch
Confidence 9999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=287.33 Aligned_cols=157 Identities=16% Similarity=0.243 Sum_probs=128.0
Q ss_pred cCCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh--HHHHHHhc--CCCcHhHHHhhccCCc
Q 000355 102 IMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLI--GVPSFDESSVPGCLRH 176 (1620)
Q Consensus 102 ~~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~~~~~--~~~~~~Ei~iL~~l~H 176 (1620)
+.++|.. .+.||+|+||+||+|.+. ..++.||+|.+......... ..+..... ....++|+++++.++|
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH 79 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC
Confidence 3567765 577999999999999862 35789999998654322100 00110000 0012489999999999
Q ss_pred ccccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 177 PNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 177 pNIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
|||+++++++..++..++||||++|+|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~- 156 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG- 156 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC-
Confidence 99999999999999999999999999999997 355689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 157 -~~kl~dfg~~~ 167 (335)
T PTZ00024 157 -ICKIADFGLAR 167 (335)
T ss_pred -CEEECCcccee
Confidence 89999999987
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=297.18 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=165.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999999962 45789999998753332222222232 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 999999999999999998 599999973 3578999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc----cccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|||+|+....... .......||+.|||||++.+.. |+.++|+|+.|++. |+++++..+|.+.+
T Consensus 184 ~DFG~a~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il-yell~G~~Pf~~~~ 251 (370)
T cd05621 184 ADFGTCMKMDETGM----------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-FEMLVGDTPFYADS 251 (370)
T ss_pred EecccceecccCCc----------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH-HHHHhCCCCCCCCC
Confidence 99999984321110 0012234789999999987643 78899999999877 77776666665543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=274.06 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5889999999999999999862 3578899999876433333333333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+...+..++|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999985 9999997544456789999999999999999999999999999999999998862 579999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||.+.
T Consensus 146 ~~~~~ 150 (257)
T cd08225 146 FGIAR 150 (257)
T ss_pred cccch
Confidence 99887
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=295.33 Aligned_cols=214 Identities=15% Similarity=0.170 Sum_probs=167.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.+|+|++.............++ +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47899999999999999999862 45789999999753222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||||+.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999985 9999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccC----CCCC--------------------CccceecccccCccchhhhccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTI----PTSP--------------------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~----~~~~--------------------~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|||+++.......... ...+ ..........||+.|||||++.+..|+.++|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999974322110000 0000 000001123579999999999999999999999999
Q ss_pred ccchHHHHhhhhcccCC
Q 000355 319 ELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gR 335 (1620)
++. |+++++..+|.+.
T Consensus 224 vil-yel~tG~~Pf~~~ 239 (360)
T cd05627 224 VIM-YEMLIGYPPFCSE 239 (360)
T ss_pred cee-eecccCCCCCCCC
Confidence 887 6666655555443
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=250.78 Aligned_cols=288 Identities=18% Similarity=0.258 Sum_probs=222.5
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEe
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWN 1341 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD 1341 (1620)
-++||..+++.|.++.+|.+|+||+. |.++.||-..+|+.+.++.||+++|+||...-+...+ +|+|.++++||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence 36899999999999999999999998 8999999999999999999999999999998777777 67799999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC-----C
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-----N 1416 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~-----D 1416 (1620)
+.+|+++.+++... .|..+.|+.+|++++.++. .
T Consensus 81 v~tGk~la~~k~~~-----------------------------------------~Vk~~~F~~~gn~~l~~tD~~mg~~ 119 (327)
T KOG0643|consen 81 VETGKQLATWKTNS-----------------------------------------PVKRVDFSFGGNLILASTDKQMGYT 119 (327)
T ss_pred cCCCcEEEEeecCC-----------------------------------------eeEEEeeccCCcEEEEEehhhcCcc
Confidence 99999998887431 2444555567888877665 3
Q ss_pred CcEEEEECCCC-------ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-E
Q 000355 1417 GSLRFIDINQG-------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-V 1488 (1620)
Q Consensus 1417 gtVrlwDl~tg-------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-~ 1488 (1620)
+.|.++|++.. ++...+..+. +.++ ..+|.|-+++|++|..||.|..||.++|+ .
T Consensus 120 ~~v~~fdi~~~~~~~~s~ep~~kI~t~~------skit-----------~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~ 182 (327)
T KOG0643|consen 120 CFVSVFDIRDDSSDIDSEEPYLKIPTPD------SKIT-----------SALWGPLGETIIAGHEDGSISIYDARTGKEL 182 (327)
T ss_pred eEEEEEEccCChhhhcccCceEEecCCc------ccee-----------eeeecccCCEEEEecCCCcEEEEEcccCcee
Confidence 67999999843 3344443222 2233 34456788999999999999999999985 5
Q ss_pred EEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEe
Q 000355 1489 IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1489 i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+..-+-|...|+.+. ++|..++++||.|.+-++||.++- ..+.++.. ..+|+ +++|-...++.|+.-. --|-.
T Consensus 183 v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--~v~Kty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTT 259 (327)
T KOG0643|consen 183 VDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--EVLKTYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTT 259 (327)
T ss_pred eechhhhccccccccccCCcceEEecccCccceeeeccce--eeEEEeee-cccccceecccccceEEecCCceeeeeee
Confidence 566678999999999 999999999999999999999986 44445442 45677 4999888888876533 33333
Q ss_pred ccCCCCCCC-cceeeccceeeecCCC--CccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1565 LSKSADEDG-QHRLVPQKLYMVDNGA--KNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1565 l~~~~~~~g-~~~~~~~kl~~~~~g~--~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+. ..| ........++...-|. +|-++|++++|+|+|+..++||+||.|||.
T Consensus 260 T~~---r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 260 TST---RAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ecc---cccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 321 122 1112223333333222 799999999999999999999999999984
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-30 Score=277.42 Aligned_cols=198 Identities=15% Similarity=0.186 Sum_probs=171.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-|.++.+||+|+||.||+|.+ .+.|.++|||.+... .+..+.. +||.||+.++.|+||++|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH------~EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYY 94 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIH------RESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYY 94 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHH------hccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhh
Confidence 4588899999999999999886 267999999998663 2333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.|.....+|||||||+ |+..++++. +++.+++.++..+++..++||+|||...-||||||..|||++.+| +.||+
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLA 171 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLA 171 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhh
Confidence 99999999999999999 899999985 678899999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC-CCCC
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDY 340 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs-~~dl 340 (1620)
|||.|......- +. .....|||+|||||+++...|+...|+|+.| ++.+++..||+ |.|+
T Consensus 172 DFGVAGQLTDTM-----AK------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLG-------ITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 172 DFGVAGQLTDTM-----AK------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLG-------ITAIEMAEGRPPYSDI 232 (502)
T ss_pred hccccchhhhhH-----Hh------hCccccCcccccHHHHHHhccchhhhHhhhc-------chhhhhhcCCCCcccc
Confidence 999998543210 00 1234589999999999999999999999999 77788889988 4554
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=279.28 Aligned_cols=141 Identities=15% Similarity=0.165 Sum_probs=116.5
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHH---hhccCCcccccceeeEEE
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESS---VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~---iL~~l~HpNIv~l~~~~~ 187 (1620)
.||+|+||.||++.+. .+++.+|+|.+.+............. +|.. ++...+||||+.+++++.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999999862 45789999998765433222222111 4443 344457999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999995 9999887 355689999999999999999999999999999999999999998 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 144 ~~ 145 (279)
T cd05633 144 AC 145 (279)
T ss_pred ce
Confidence 86
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=288.12 Aligned_cols=150 Identities=23% Similarity=0.291 Sum_probs=125.9
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.+...++|.+.+.||+|+||.||+|.+ ..+++.+|+|++............+. +|+.+++.++|||
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~n 75 (342)
T cd07879 10 VWELPERYTSLKQVGSGAYGSVCSAID------KRTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHEN 75 (342)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEe------CCCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCC
Confidence 344567999999999999999999986 24578999999875422222222333 8999999999999
Q ss_pred ccceeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 179 VAPVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 179 Iv~l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
|+++++++.... .+++||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 76 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~ 151 (342)
T cd07879 76 VIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN 151 (342)
T ss_pred ccchhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 999999987653 579999999888877653 3578999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCcc
Q 000355 253 DSCWSWLYICDKPLVG 268 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~ 268 (1620)
.++ .+||+|||+++
T Consensus 152 ~~~--~~kL~dfg~~~ 165 (342)
T cd07879 152 EDC--ELKILDFGLAR 165 (342)
T ss_pred CCC--CEEEeeCCCCc
Confidence 998 89999999987
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=305.04 Aligned_cols=277 Identities=15% Similarity=0.233 Sum_probs=220.8
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----c----eeEEeecccCcEEEEEEccC-CCEEEEe
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-----S----ILSSIRAHHGALRSVAVGQD-ECTVFTA 1287 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g-----~----~l~tl~gH~~~V~svafspd-g~~LaSg 1287 (1620)
.+.+|.+.|++ |+|+|.+ +||||.|++|+|||... . .+..+. +...|.+++|++. +.+|++|
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~ 551 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASS 551 (793)
T ss_pred cccCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEE
Confidence 34568999986 9999987 99999999999999742 1 233344 3568999999875 6899999
Q ss_pred ccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEee-CCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCC
Q 000355 1288 GIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364 (1620)
Q Consensus 1288 s~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~-~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~ 1364 (1620)
+. ||+|++||+.+++.+..+.+|.+.|++++|++ ++..++++ ||+|++||+++++++..+..+.
T Consensus 552 ~~----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~--------- 618 (793)
T PLN00181 552 NF----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA--------- 618 (793)
T ss_pred eC----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC---------
Confidence 96 99999999999999999999999999999997 56666444 9999999999998877665321
Q ss_pred CCCcccccccccccccccCCCCCeEEEeecCCceEEEEEe-cCCCEEEEEECCCcEEEEECCCCc-eeEEeeCCCccccc
Q 000355 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI-ECVERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGF 1442 (1620)
Q Consensus 1365 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s-~dg~~lasgs~DgtVrlwDl~tg~-~l~~l~~~~~~v~~ 1442 (1620)
.+.++.++ ++|..+++|+.||+|++||+++++ .+..+.+|
T Consensus 619 --------------------------------~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h------ 660 (793)
T PLN00181 619 --------------------------------NICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGH------ 660 (793)
T ss_pred --------------------------------CeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCC------
Confidence 13455553 468999999999999999998865 45555544
Q ss_pred CCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC------cEEEEEEccCCcEEEEE-eCCCCEEEEEeC
Q 000355 1443 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSL 1515 (1620)
Q Consensus 1443 ~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1515 (1620)
...|.+++|. ++.++++|+.|++|++||++++ +++..+.+|...+++++ ++++.+|++|+.
T Consensus 661 ~~~V~~v~f~------------~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~ 728 (793)
T PLN00181 661 SKTVSYVRFV------------DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 728 (793)
T ss_pred CCCEEEEEEe------------CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 4457888873 3468999999999999999853 57888999999999999 899999999999
Q ss_pred CCcEEEEECCCCCCCCCe-----------EeecCCCCEE--EEeecCCEEEEEeCCc-eEEEec
Q 000355 1516 DKTLRIWDLRRNWPSQPT-----------VFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1516 DgtI~IWDl~~~~~~~~~-----------~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
|++|++|+.....+...+ ....|...|. +|++++..|++|+.|| |++|++
T Consensus 729 D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 729 TNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 999999998654211101 1233445576 4899999999999999 999986
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=272.59 Aligned_cols=148 Identities=19% Similarity=0.183 Sum_probs=128.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||.|+||.||+|... .++..+|+|++....... ....+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 47999999999999999999851 357889999987644333 333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.+..++..++|||++++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999985 9999997432 25689999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 144 ~df~~~~ 150 (267)
T cd06610 144 ADFGVSA 150 (267)
T ss_pred cccchHH
Confidence 9999987
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=287.84 Aligned_cols=149 Identities=24% Similarity=0.317 Sum_probs=127.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
...++|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||+
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 77 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVI 77 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHH
Confidence 34678999999999999999999862 3578899999865322222223333 899999999999999
Q ss_pred ceeeEEEeCCE------EEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 181 PVLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~~~~------~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++++...+. +++|+||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~ 154 (343)
T cd07851 78 GLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 154 (343)
T ss_pred HHHHHhhccccccccccEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 99998876654 99999999989999987 3468999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||++.
T Consensus 155 ~--~~kL~dfg~~~ 166 (343)
T cd07851 155 C--ELKILDFGLAR 166 (343)
T ss_pred C--CEEEccccccc
Confidence 8 89999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=276.35 Aligned_cols=154 Identities=17% Similarity=0.144 Sum_probs=126.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|..... .....+..||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDI-IKGEAETRVAVKTVNESA-SLRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEecc-CCCCcceEEEEEECCCcC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999875221 112346789999986532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++...+..|+||||++ |+|.++++... ....+...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 999999999999999998 59999997421 123456778889999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 155 ~~--~~~L~Dfg~~~ 167 (288)
T cd05061 155 DF--TVKIGDFGMTR 167 (288)
T ss_pred CC--cEEECcCCccc
Confidence 88 89999999987
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=275.22 Aligned_cols=351 Identities=15% Similarity=0.196 Sum_probs=258.4
Q ss_pred ceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC
Q 000355 1227 WFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1303 (1620)
Q Consensus 1227 ~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~ 1303 (1620)
.|.+ .++|... ||.|=.||.|++|+.. +...-++.||..+|+++.|...|..|+|||. |+.|.+||+-
T Consensus 67 evt~l~~~~d~l~-----lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGsk----Dt~IIvwDlV 137 (888)
T KOG0306|consen 67 EVTCLRSSDDILL-----LAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSK----DTDIIVWDLV 137 (888)
T ss_pred eEEEeeccCCcce-----EEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCC----CccEEEEEec
Confidence 4554 3445443 8999999999999988 7788899999999999999999999999998 9999999998
Q ss_pred CCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCcccc---------------------
Q 000355 1304 RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH--------------------- 1360 (1620)
Q Consensus 1304 tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~--------------------- 1360 (1620)
...-+..++||.+.|+..-|..+...++|+ |++|++||+.+..|..+.-.|......
T Consensus 138 ~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~ 217 (888)
T KOG0306|consen 138 GEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWE 217 (888)
T ss_pred cceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEE
Confidence 777788999999999999987767777444 999999999987776554332211000
Q ss_pred ---------------------------------ccCCCCCcccccccc--------------------------cccc--
Q 000355 1361 ---------------------------------GGSPSSSISKINTDQ--------------------------VGML-- 1379 (1620)
Q Consensus 1361 ---------------------------------~~s~s~~~~~~~~~~--------------------------~~~~-- 1379 (1620)
...++.......+.. ....
T Consensus 218 L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~ 297 (888)
T KOG0306|consen 218 LAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETE 297 (888)
T ss_pred eecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcccc
Confidence 000000000000000 0000
Q ss_pred -----------------------------cc--cCC--------------------CCCe---------EEEeecCCceE
Q 000355 1380 -----------------------------NS--NTL--------------------SSGI---------LSTAFDGNLYT 1399 (1620)
Q Consensus 1380 -----------------------------~~--~~~--------------------s~~v---------~sv~f~~~~vt 1399 (1620)
.+ ... +... .....+...|.
T Consensus 298 e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVR 377 (888)
T KOG0306|consen 298 ENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVR 377 (888)
T ss_pred ccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhee
Confidence 00 000 0000 01111223466
Q ss_pred EEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEE
Q 000355 1400 CLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCR 1479 (1620)
Q Consensus 1400 ~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~ 1479 (1620)
.++++.+...+++|+ .+.+++|+..+.++++++... .+.+.+|. |.++++++|..+|.+.
T Consensus 378 sl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--------y~l~~~Fv-----------pgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 378 SLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG--------YILASKFV-----------PGDRYIVLGTKNGELQ 437 (888)
T ss_pred EEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc--------cEEEEEec-----------CCCceEEEeccCCceE
Confidence 677777666666654 478999999999999998742 46677776 4457999999999999
Q ss_pred EEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCC-----CCC------------------------
Q 000355 1480 LFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR-----NWP------------------------ 1529 (1620)
Q Consensus 1480 lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~-----~~~------------------------ 1529 (1620)
+||+.+...+.+.++|++.|++++ +||+..+++||.|++|++||..- +..
T Consensus 438 vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S 517 (888)
T KOG0306|consen 438 VFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS 517 (888)
T ss_pred EEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc
Confidence 999999999999999999999999 99999999999999999998631 100
Q ss_pred -----------------------CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeecccee
Q 000355 1530 -----------------------SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLY 1583 (1620)
Q Consensus 1530 -----------------------~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~ 1583 (1620)
+-...+-||.-||.| +|||+++++|||.|+ |++|-++ -|.+.. .+
T Consensus 518 pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd-----FGDCHK---S~- 588 (888)
T KOG0306|consen 518 PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD-----FGDCHK---SF- 588 (888)
T ss_pred CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc-----cchhhh---hh-
Confidence 001244589999997 899999999999999 9999876 344321 11
Q ss_pred eecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1584 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1584 ~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+|...|.++.|.|...+|.+||.||.||-||
T Consensus 589 -----fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 589 -----FAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD 620 (888)
T ss_pred -----hcccCceeEEEEcccceeEEEecCcceEEeec
Confidence 25889999999999999999999999999997
|
|
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=275.81 Aligned_cols=147 Identities=20% Similarity=0.254 Sum_probs=124.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ...+. +|+.+++++ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 678999999999999999999862 46789999998653221 12222 789999988 7999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 182 VLGLLKTS-----GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++... +.+++||||+++ +|.++++. .....+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998754 368999999985 99998863 23456889999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 164 ~~--~~kl~dfg~~~ 176 (291)
T cd06639 164 EG--GVKLVDFGVSA 176 (291)
T ss_pred CC--CEEEeecccch
Confidence 98 89999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=277.83 Aligned_cols=147 Identities=16% Similarity=0.193 Sum_probs=125.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+.|++.+.||+|+||.||+|.+. .+++.+|+|.+.... ....++. +|+.+++++ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTE---DEEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecCh---HHHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 468999999999999999999962 456889999986532 2222333 788888888 6999999
Q ss_pred eeeEEEe------CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 182 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 182 l~~~~~~------~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+++++.. .+.+|+||||+++ +|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4589999999985 99999986555668888899999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 158 ~--~~~l~dfg~~~ 169 (282)
T cd06636 158 A--EVKLVDFGVSA 169 (282)
T ss_pred C--CEEEeeCcchh
Confidence 8 89999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=276.52 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=124.4
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 4679999999999999999999862 35688999987542211 12233 799999999 699999
Q ss_pred ceeeEEE-----eCCEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 181 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 181 ~l~~~~~-----~~~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
++++++. .++.+++||||++| +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999884 34579999999985 99988763 2345678899999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++ .+||+|||+++.
T Consensus 159 ~~~--~~kl~dfg~~~~ 173 (286)
T cd06638 159 TEG--GVKLVDFGVSAQ 173 (286)
T ss_pred CCC--CEEEccCCceee
Confidence 998 799999999873
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=279.05 Aligned_cols=150 Identities=20% Similarity=0.183 Sum_probs=127.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.||+|.++...........+. +|+++++.++||||++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~ 70 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVN 70 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeee
Confidence 3678999999999999999999962 3578899999875432222222223 8999999999999999
Q ss_pred eeeEEEeCC----------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 182 VLGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 182 l~~~~~~~~----------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
+++++.+.. .+++||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 71 LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred eeheecCcchhhhccccCCcEEEEEcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999987655 8999999999998888874 24468999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcc
Q 000355 252 TDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~ 268 (1620)
++++ .+||+|||+++
T Consensus 150 ~~~~--~~kl~dfg~~~ 164 (302)
T cd07864 150 NNKG--QIKLADFGLAR 164 (302)
T ss_pred CCCC--cEEeCcccccc
Confidence 9998 89999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=274.56 Aligned_cols=146 Identities=16% Similarity=0.211 Sum_probs=127.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 46889999999999999999862 467899999987542 222233333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..+..+|+|+||+++ +|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999985 99999973 2789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 141 d~g~~~~ 147 (274)
T cd06609 141 DFGVSGQ 147 (274)
T ss_pred cccccee
Confidence 9999873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=292.93 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=166.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|++.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 579999999999999999999862 45789999998653222222222222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 999999999999999998 599999873 3578999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc----cccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|||+++........ ......||+.|||||++.+.. |+.++|+|+.|++. |+++++..+|.+++
T Consensus 184 ~DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~ 251 (371)
T cd05622 184 ADFGTCMKMNKEGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYADS 251 (371)
T ss_pred EeCCceeEcCcCCcc----------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHH-HHHHhCCCCCCCCC
Confidence 999999843211100 011234789999999987543 78899999999877 77777776666554
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=256.50 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=244.1
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
+.-.+.||++.|.+ ||.||.+ ||||+.||.++||+.. +.....+-+--+.|.-+.|+|.+.+|+.|+.
T Consensus 98 ~~~eltgHKDSVt~~~Fshdgtl-----LATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~---- 168 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTL-----LATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST---- 168 (399)
T ss_pred ceeEecCCCCceEEEEEccCceE-----EEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC----
Confidence 56778999999996 9999998 9999999999999988 6677777677788999999999999999998
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1371 (1620)
||.|.+|.+.++...+.+.||..++++=.|.|+|+++ +..||+|++||+++|+++..+.....
T Consensus 169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~--------------- 233 (399)
T KOG0296|consen 169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG--------------- 233 (399)
T ss_pred CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc---------------
Confidence 9999999999988889999999999999999999998 44599999999999998877763210
Q ss_pred cccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCC--cccccCCccceE
Q 000355 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP--TELGFPSLVSAI 1449 (1620)
Q Consensus 1372 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~--~~v~~~~~V~sv 1449 (1620)
...+|+.++.++..+++|+.++.+.+-...+|+.+....+.. ....+...+.||
T Consensus 234 ------------------------~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esv 289 (399)
T KOG0296|consen 234 ------------------------LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESV 289 (399)
T ss_pred ------------------------CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhh
Confidence 113566666778899999999999999999999887776411 112344556666
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
.+.+..+ .=.+.|+|+-||+|.|||..+.++...+. |..+|..+.+-+..+|++++.||+|+.||.|+|
T Consensus 290 e~~~~ss--------~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG-- 358 (399)
T KOG0296|consen 290 ESIPSSS--------KLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLNTDYLLTACANGKVRQWDARTG-- 358 (399)
T ss_pred hhccccc--------ccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcCcchheeeccCceEEeeecccc--
Confidence 6654332 22578999999999999999877766666 899999999444789999999999999999999
Q ss_pred CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEecc
Q 000355 1530 SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
...+++.||...|.+ ++|++++++|+|.|+ .+||...
T Consensus 359 ~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 778899999999996 889999999999999 8998853
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=276.29 Aligned_cols=280 Identities=15% Similarity=0.211 Sum_probs=226.7
Q ss_pred cccccccCCCceec--cCC-CCCCCCCCeEEEEcCCCCEEEEeCC--CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1217 ATSNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Sp-dg~~~~~~~lasgS~D~~i~lWd~~--g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
-..++.||+..|.+ |.| .+.+ |++||.|+.|+||++- +.+++++.||..+|.+++|+.+|..++|+|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s--- 277 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS--- 277 (503)
T ss_pred heeeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee---
Confidence 36788999999987 666 5554 9999999999999976 789999999999999999999999999999
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
||++|++||++||+|+..|. -...+++|.|+|++..+ +..|+.|+.||+++|+.++.+..|-
T Consensus 278 -fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL------------- 342 (503)
T KOG0282|consen 278 -FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL------------- 342 (503)
T ss_pred -cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh-------------
Confidence 69999999999999999886 35678999999998543 3449999999999999888776542
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
+.|. .+.|-++|..+++.+.|+++++|+.+.+-.++...... .....
T Consensus 343 -----------------g~i~----------~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP- 389 (503)
T KOG0282|consen 343 -----------------GAIL----------DITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMP- 389 (503)
T ss_pred -----------------hhee----------eeEEccCCceEeeeccCccEEEEEcCCCccchhhcchh-----hccCc-
Confidence 2233 34455579999999999999999998876654332111 01122
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC---cEEEEEEccCCcEE--EEE-eCCCCEEEEEeCCCcEEEE
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG---NVIASWRAHDGYVT--KLA-APEDHLLVSSSLDKTLRIW 1522 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg---~~i~~l~gH~~~V~--sva-spdg~~LaSgS~DgtI~IW 1522 (1620)
+.+..|+++++++=+.|+.|.+|.+... ..-..++||..+=. .|. +|||.+|+||+.||.+.+|
T Consensus 390 ----------~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~w 459 (503)
T KOG0282|consen 390 ----------CLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFW 459 (503)
T ss_pred ----------ceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEe
Confidence 3344588899999999999999987643 23456778865443 444 9999999999999999999
Q ss_pred ECCCCCCCCCeEeecCCCCEEE--EeecC-CEEEEEeCCc-eEEEe
Q 000355 1523 DLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1523 Dl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwd 1564 (1620)
|.++. +.+..++.|..++.. |.|.. ..+|||+.|| |++|+
T Consensus 460 dwkt~--kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 460 DWKTT--KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred echhh--hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99987 667799999888884 77764 5799999999 99996
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=285.33 Aligned_cols=148 Identities=24% Similarity=0.390 Sum_probs=126.5
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
+.++|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.+ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRTF--------REIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhhh--------HHHHHHHHhcCCCCcc
Confidence 4678999999999999999999862 3568899999865332222223333 899999999 999999
Q ss_pred ceeeEEEeCC--EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 181 PVLGLLKTSG--LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 181 ~l~~~~~~~~--~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++++++...+ .+|+||||++++|.+++.. ..+.+..++.++.||+.||.|||++||+||||||+|||++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 9999986543 7899999999999999873 2678888889999999999999999999999999999999999 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 146 ~kl~d~g~~~ 155 (337)
T cd07852 146 VKLADFGLAR 155 (337)
T ss_pred EEEeeccchh
Confidence 9999999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=289.96 Aligned_cols=143 Identities=19% Similarity=0.165 Sum_probs=118.5
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..+.|++...+|.|+|+.|-.|.+ ..+++..++|++.+.....+ +|+.++... +||||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~------~~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCES------SPTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIV 379 (612)
T ss_pred cchhhccccccCCCCccceeeeec------cccccchhheeccccccccc--------------cccchhhhhcCCCcce
Confidence 467899999999999999998886 24568889999987532222 677655544 799999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe-cCCCceE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSW 258 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl-~~~~~~~ 258 (1620)
++++++.+..+.|+|||.+.| .+.+.+.. ...+. .++..|++||+.|+.|||++|||||||||+|||+ ++.+ +
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~ 454 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--H 454 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--c
Confidence 999999999999999999996 66666663 23333 7778899999999999999999999999999999 5777 8
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
++|+|||.++.
T Consensus 455 lrltyFG~a~~ 465 (612)
T KOG0603|consen 455 LRLTYFGFWSE 465 (612)
T ss_pred EEEEEechhhh
Confidence 99999999984
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=276.21 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=121.4
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||+||+|.+. .+++.+|+|.+......... ...+. +|+++|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999999862 45789999998764322222 22223 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~ 143 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAV 143 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchh
Confidence 99999999995 999999754444789999999999999999999999999999999999999998 89999999887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-27 Score=270.52 Aligned_cols=145 Identities=18% Similarity=0.221 Sum_probs=127.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+++++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKY 63 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999999862 2468899999865321 33344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..+..+|+++||+++ +|.+++.. ....+++..++.++.|++.||.|||+++|+||||+|+||+++.++ .+||
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l 140 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKL 140 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEE
Confidence 9999999999999999995 99999874 345679999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 141 ~dfg~~~ 147 (256)
T cd06612 141 ADFGVSG 147 (256)
T ss_pred cccccch
Confidence 9999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=271.53 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=125.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh----HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+|.+.+.||+|+||.||+|.+. .+++.+|+|.++........ .....+.+ .+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~----~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVKAL----RSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHHHH----HHHHHHHHhcCCCCcc
Confidence 5888999999999999999851 45789999988642221111 11111111 1899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++...+.+++||||+++ +|.++++. .+.+++..++.++.||+.||.|||++|++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999985 99999984 36788999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 ~l~d~~~~~ 156 (272)
T cd06629 148 KISDFGISK 156 (272)
T ss_pred EEeeccccc
Confidence 999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=279.29 Aligned_cols=143 Identities=18% Similarity=0.167 Sum_probs=122.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|+....||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQQ--RRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEecccc--hHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 3445568999999999999862 35788999998653222 222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999995 8988776 34678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 161 fg~~~ 165 (297)
T cd06659 161 FGFCA 165 (297)
T ss_pred chhHh
Confidence 99886
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=284.25 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=122.4
Q ss_pred eceeee--eeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEE
Q 000355 110 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~ 187 (1620)
..||+| +||+||+|++ ..+++.||+|.+..........+.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~------~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARH------TPTGTLVTVRITDLENCTEEHLKALQ--------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEE------cCCCcEEEEEEeccccCCHHHHHHHH--------HHHHHHHhCCCCCcceEeeeEe
Confidence 467777 9999999986 24689999999876544433333333 8999999999999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++..++||||+.+ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999995 999999854445689999999999999999999999999999999999999988 899999986
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
+.
T Consensus 148 ~~ 149 (328)
T cd08226 148 LY 149 (328)
T ss_pred Hh
Confidence 54
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=287.91 Aligned_cols=217 Identities=17% Similarity=0.203 Sum_probs=181.0
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+....|.+.+.||+|.|++|.+|++. -++..||||.+.+..........+. +|+++|+.|+||||
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnI 117 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNI 117 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCcce
Confidence 344778999999999999999999973 3578899999988766655544444 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
|+++.+.+++..+|+||||+. |++++++. +.+.+.+..++.++.|+++|++|||+++|+|||||.+||||+.+. +
T Consensus 118 vkl~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--n 193 (596)
T KOG0586|consen 118 VKLFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--N 193 (596)
T ss_pred eeeeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--c
Confidence 999999999999999999998 59999999 567788899999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccc-ccccccccccchHHHHhhhhcccCCCC
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~-~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||+|||++........ . .+.| |++.|.|||++.+..|+. .+|.|+.|.+. |..+.+.=+|.|...
T Consensus 194 ikIaDfgfS~~~~~~~~------l-----qt~c-gsppyAaPEl~~g~~y~gpe~D~Wslgvvl-y~LV~GsLPFDG~~l 260 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGLM------L-----QTFC-GSPPYAAPELFNGKKYDGPEVDIWSLGVVL-YALVEGSLPFDGQNL 260 (596)
T ss_pred eeeeccccceeeccccc------c-----cccC-CCCCccChHhhcCcccCCcceehhhhhhhh-eeeeecccccCCccc
Confidence 99999999985432110 0 1233 578899999999999965 99999999887 666666666777766
Q ss_pred CCCcCCcccc
Q 000355 338 GDYTFHMVMP 347 (1620)
Q Consensus 338 ~dl~q~pv~p 347 (1620)
..+...-++-
T Consensus 261 k~Lr~rvl~g 270 (596)
T KOG0586|consen 261 KELRPRVLRG 270 (596)
T ss_pred ccccchheee
Confidence 6665544433
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=279.63 Aligned_cols=144 Identities=19% Similarity=0.188 Sum_probs=123.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.|.....||+|+||.||++.+. .++..+|||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999998862 357889999986422 22223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+...+..|+||||+++ +|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999985 8888876 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 161 dfg~~~ 166 (292)
T cd06658 161 DFGFCA 166 (292)
T ss_pred cCcchh
Confidence 999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=276.66 Aligned_cols=149 Identities=18% Similarity=0.158 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||+|.+. .+++.||+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 457999999999999999999862 357899999986543322 2223344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++..++..|+||||++|++.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 99999999999999999999998888642 34689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 157 ~dfg~~~ 163 (307)
T cd06607 157 ADFGSAS 163 (307)
T ss_pred eecCcce
Confidence 9999887
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=290.39 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=167.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.||+|++............... +|++++..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 47999999999999999999972 36789999999764332222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++| +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999984 99999984 46789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccC------------------CCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 263 DKPLVGFNSIADWCTI------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~------------------~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
|||+++.......... ..............||+.|+|||++.+..++.++|+|+.|++. |+
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~e 222 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL-YE 222 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh-hh
Confidence 9999985432210000 0000000112334578999999999999999999999999876 66
Q ss_pred HHhhhhccc
Q 000355 325 YLLFLNKLA 333 (1620)
Q Consensus 325 yL~~ln~~~ 333 (1620)
++++..+|.
T Consensus 223 ll~g~~Pf~ 231 (350)
T cd05573 223 MLYGFPPFY 231 (350)
T ss_pred hccCCCCCC
Confidence 555444443
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=272.13 Aligned_cols=146 Identities=21% Similarity=0.266 Sum_probs=128.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|+++++.++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 5899999999999999999862 357889999997644333 2333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++.+++||||+.| +|.+++.. ...+++..+..++.||++||.|||++||+|+||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999985 99999973 35789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 143 d~~~~~ 148 (258)
T cd05578 143 DFNIAT 148 (258)
T ss_pred eccccc
Confidence 999887
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-27 Score=280.15 Aligned_cols=149 Identities=21% Similarity=0.339 Sum_probs=127.3
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+.++|++.+.||+|+||.||+|.+. .++..+|+|++.+..........+. +|+++++.++||||+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv 72 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENII 72 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCee
Confidence 35678999999999999999999862 4678999998865322222223333 899999999999999
Q ss_pred ceeeEEEe-CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~-~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++|.. .+..|+||||++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 73 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~ 147 (328)
T cd07856 73 SLSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DL 147 (328)
T ss_pred eEeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CE
Confidence 99999876 45899999999989998886 34578888899999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 ~l~dfg~~~ 156 (328)
T cd07856 148 KICDFGLAR 156 (328)
T ss_pred EeCcccccc
Confidence 999999887
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=271.62 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=126.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+++|.+..... ...++. +|+.+++++ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999999962 3467899999865422 223333 899999998 6999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 182 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
+++++.... .+++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 58999999995 9999887433 46789999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 998 899999999873
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-27 Score=273.50 Aligned_cols=147 Identities=24% Similarity=0.246 Sum_probs=123.5
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Ccccccce
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 182 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~l 182 (1620)
|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.+ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 678899999999999999962 2578899999975433221112222 677766555 69999999
Q ss_pred eeEEEeCCE-----EEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~~-----~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999998876 9999999999999998864445689999999999999999999999999999999999999998
Q ss_pred EEEEeecCCcc
Q 000355 258 WLYICDKPLVG 268 (1620)
Q Consensus 258 ~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 145 ~~~l~dfg~~~ 155 (287)
T cd07838 145 QVKIADFGLAR 155 (287)
T ss_pred CEEEeccCcce
Confidence 89999999887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=286.66 Aligned_cols=193 Identities=19% Similarity=0.186 Sum_probs=161.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.+++++.||+|-||+||+|+. .....||+|.++...... ..|+ +|+++|++|+|+|||++++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~-------~~~~~vavk~ik~~~m~~---~~f~--------~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKW-------NGSTKVAVKTIKEGSMSP---EAFL--------REAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEE-------cCCCcccceEEeccccCh---hHHH--------HHHHHHHhCcccCeEEEEE
Confidence 466789999999999999985 233478999998764443 3455 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++.+|||||||+ |+|.++|+...+..+...+...++.||++|++||+++++|||||...|||++++. .+||+|
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsD 346 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISD 346 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcc
Confidence 9999889999999999 8999999975677889999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
|||||......-... .... -...|.|||.+....++.++|+|+.|.+. +|.++.
T Consensus 347 FGLAr~~~d~~Y~~~-~~~k---------fPIkWtAPEa~~~~~FS~kSDVWSFGVlL-~E~fT~ 400 (468)
T KOG0197|consen 347 FGLARLIGDDEYTAS-EGGK---------FPIKWTAPEALNYGKFSSKSDVWSFGVLL-WELFTY 400 (468)
T ss_pred cccccccCCCceeec-CCCC---------CCceecCHHHHhhCCcccccceeehhhhH-HHHhcc
Confidence 999994332211111 1110 23469999999999999999999999765 666655
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=267.30 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=126.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||.|+||.||+|.+. .++..+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5889999999999999999862 4678899999876544444444444 8999999999999999999
Q ss_pred EEEe--CCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCceEecCC
Q 000355 185 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 185 ~~~~--~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH-----~~gIiHRDLKP~NILl~~~ 254 (1620)
++.. ...++++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8864 3578999999985 999999742 2456889999999999999999999 9999999999999999998
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 147 ~--~~kl~d~g~~~ 158 (265)
T cd08217 147 N--NVKLGDFGLAK 158 (265)
T ss_pred C--CEEEecccccc
Confidence 8 89999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=272.50 Aligned_cols=147 Identities=19% Similarity=0.242 Sum_probs=128.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||+|+||.||+|.+. .+++.+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFY 65 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhh
Confidence 36888899999999999999862 4578899999876432 23333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.+..++.+++||||++ ++|.+++.... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l 142 (265)
T cd06605 66 GAFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKL 142 (265)
T ss_pred eeeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 59999998432 678899999999999999999999 9999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||.+.
T Consensus 143 ~d~g~~~ 149 (265)
T cd06605 143 CDFGVSG 149 (265)
T ss_pred eecccch
Confidence 9999886
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=266.51 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=126.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCC---hhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|+..+.||+|+||+||+|.+. .++..+++|.+...... .+..+.+. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4778899999999999999862 35788999998654322 12223333 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+.+++||||+++ +|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999985 99999973 45678999999999999999999999999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 143 l~d~~~~~ 150 (258)
T cd06632 143 LADFGMAK 150 (258)
T ss_pred EccCccce
Confidence 99999987
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=281.96 Aligned_cols=207 Identities=15% Similarity=0.137 Sum_probs=173.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+.|..-++||+|+||+|+-|+- ..+|+.+|.|++.+.+......+.. +++|..||++++.+.||.
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqv------raTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQV------RATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVS 249 (591)
T ss_pred cccceeeeEEEecccccceeEEEE------ecchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEE
Confidence 345788899999999999999874 2578999999987754433322221 359999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+-..|++++.+++||..|+| ||.-+|....+..+++..+++|+.+|+.||++||+.+||.|||||+|||+|+.| +++
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvR 327 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVR 327 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeE
Confidence 99999999999999999995 999888866667899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+|.|||....... + ...-.||..|||||++.+..|+...|+|+.||+. ||++-+..+|..|.
T Consensus 328 ISDLGLAvei~~g~-------~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCll-Yemi~G~sPFr~~K 390 (591)
T KOG0986|consen 328 ISDLGLAVEIPEGK-------P-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLL-YEMIAGHSPFRQRK 390 (591)
T ss_pred eeccceEEecCCCC-------c-----cccccCcccccCHHHHcCCcccCCccHHHHHhHH-HHHHcccCchhhhh
Confidence 99999998543211 1 1222489999999999999999999999999887 77776666665554
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=272.41 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=126.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
..|+.++.||.|+||.||+|.+. ..+..+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEE-AEDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEeccc-cHHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46888899999999999999862 356889999987532 223333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++..++||||++| +|.+++. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999985 9999987 34578899999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06640 144 DFGVAG 149 (277)
T ss_pred ccccce
Confidence 999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=272.48 Aligned_cols=143 Identities=15% Similarity=0.133 Sum_probs=116.8
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
.||+|+||.||+|.+. .+++.||+|.+.+........ ..+.. ...++++++...||||+++++++...
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALN-----ERIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHH-----HHHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999999862 457899999987643322111 11221 00234455556899999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999985 9998887 456789999999999999999999999999999999999999998 89999999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=284.73 Aligned_cols=202 Identities=15% Similarity=0.108 Sum_probs=161.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++++. .+++.+|+|.+.+...........++ +|+.++..++|+||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47999999999999999999862 35788999998653222222222222 789999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++ |+|.+++... ...+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 99999999999999998 5999999742 45689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-----cccccccccccccccchHHHHhhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-----~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
|||+++........ ......||+.|||||++.+ ..++.++|+|+.|++. |+++++..+|
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil-~ell~g~~Pf 208 (331)
T cd05624 145 DFGSCLKMNQDGTV----------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM-YEMLYGETPF 208 (331)
T ss_pred eccceeeccCCCce----------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh-hhhhhCCCCc
Confidence 99999743211100 0111237889999998875 4678899999999876 6666544444
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=269.01 Aligned_cols=140 Identities=19% Similarity=0.259 Sum_probs=121.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 191 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~ 191 (1620)
||+|+||.||+|++. .+++.+|+|.+.+.........+.+. +|+++++.++||||+++++.+.+++.
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 699999999999972 35789999999765433322223232 89999999999999999999999999
Q ss_pred EEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 192 ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 192 ~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+++||||++ ++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~ 141 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAK 141 (262)
T ss_pred cEEEEecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCccc
Confidence 999999998 499999983 45689999999999999999999999999999999999999998 89999999987
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=273.39 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=128.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+..+.|...+.||+|+||.||+|++. .++..+++|.+........ ....+. +|+++++.++||||
T Consensus 18 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 83 (313)
T cd06633 18 DPEEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNT 83 (313)
T ss_pred CHHHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCC
Confidence 33445778889999999999999862 4578999999875433222 223333 89999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 180 APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++++.+.+..|+||||+.++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 84 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~ 160 (313)
T cd06633 84 IEYKGCYLKEHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QV 160 (313)
T ss_pred ccEEEEEEeCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CE
Confidence 999999999999999999999999988874 345688999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||++.
T Consensus 161 kL~dfg~~~ 169 (313)
T cd06633 161 KLADFGSAS 169 (313)
T ss_pred EEeecCCCc
Confidence 999999876
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=307.69 Aligned_cols=204 Identities=16% Similarity=0.134 Sum_probs=169.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.|.++++ ..++++||+|++.+..........+.+ .|-.+|..-+.+-|++|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~------k~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRH------KSTEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEe------eccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 46999999999999999999986 256799999999875444343344443 78899999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+..|+++.++|+|||||+| ||..++.. ...+++..+++|+..|+.||.-||+.|+|||||||+|||||..| ++||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999995 99999983 34799999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----c-cccccccccccccccchHHHHhhhhcccC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----S-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~-~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
+|||.+-.....+.. .+...+|||-|.+||++. + ..|+..||+|+.|.+. ||+|.+-.+|-.
T Consensus 217 ADFGsClkm~~dG~V----------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~-YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTV----------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM-YEMLYGETPFYA 283 (1317)
T ss_pred ccchhHHhcCCCCcE----------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH-HHHHcCCCcchH
Confidence 999988644322111 123445999999999986 2 5689999999999665 777766655544
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=263.20 Aligned_cols=148 Identities=23% Similarity=0.223 Sum_probs=129.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+++|.+............+. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5889999999999999999972 3578899999976544333334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999995 9999998532 46789999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 145 ~d~~~~~ 151 (258)
T cd08215 145 GDFGISK 151 (258)
T ss_pred CCcccee
Confidence 9999887
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-26 Score=264.40 Aligned_cols=146 Identities=23% Similarity=0.264 Sum_probs=128.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.+............+. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5889999999999999999862 3578899999976544323334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+.+++|+||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999995 9999998 345578889999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 143 ~g~~~ 147 (264)
T cd06626 143 FGCAV 147 (264)
T ss_pred ccccc
Confidence 99987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=269.59 Aligned_cols=142 Identities=18% Similarity=0.138 Sum_probs=116.4
Q ss_pred CCCeeeeece--eeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccc
Q 000355 103 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 179 (1620)
Q Consensus 103 ~~~y~~~~~L--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNI 179 (1620)
.++|++.+.+ |+|+||.||++.+. .++..+|+|.+....... .|+.....+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 4466666665 99999999999862 457889999986532211 122222222 69999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++.|..++.+|+||||++ ++|.+++.. ...+++..++.++.||++||.|||++||+||||||+||+++.++. .
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-R 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCC-e
Confidence 999999999999999999998 599999983 347899999999999999999999999999999999999988762 6
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
++|+|||+++
T Consensus 149 ~~l~dfg~~~ 158 (267)
T PHA03390 149 IYLCDYGLCK 158 (267)
T ss_pred EEEecCccce
Confidence 9999999887
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=269.98 Aligned_cols=146 Identities=25% Similarity=0.294 Sum_probs=126.6
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|.+. .+++.+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 678899999999999999862 3578999999986532222222333 89999999999999999999
Q ss_pred EEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 186 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 186 ~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+... +..++||||++++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+|||+++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9988 899999999999999998742 35789999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 144 ~g~~~ 148 (287)
T cd07840 144 FGLAR 148 (287)
T ss_pred cccee
Confidence 99987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-26 Score=265.85 Aligned_cols=141 Identities=23% Similarity=0.291 Sum_probs=119.3
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
...||+|+||.||+|.+ ..++..+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 13 ~~~lg~g~~g~v~~~~~------~~~~~~v~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 13 RVVLGKGTYGIVYAARD------LSTQVRIAIKEIPER--DSRYVQPLH--------EEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred eEEEecCCceEEEEeEe------cCCCcEEEEEEecCC--CHHHHHHHH--------HHHHHHHhcCCCCeeeeeeeecc
Confidence 35899999999999986 145788999988653 222333444 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceEEEEeec
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDK 264 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~lKL~DF 264 (1620)
++..++||||+++ +|.+++... ...+ ++..+..++.||+.||.|||++||+||||||+||+++. ++ .+||+||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l~df 153 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKISDF 153 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEEecc
Confidence 9999999999985 999999742 2334 77888899999999999999999999999999999986 45 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|++.
T Consensus 154 g~~~ 157 (268)
T cd06624 154 GTSK 157 (268)
T ss_pred hhhe
Confidence 9987
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=271.56 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=127.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||++.+ ..++..+|+|++.... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKH------IPTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEE------cCCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 35799999999999999999986 2457889999886532 222233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++...+.+++||||+++ +|.+++. ..+.++...++.++.|++.||.|||+ ++|+||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999995 9998887 34568899999999999999999997 6999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 145 l~d~gl~~ 152 (284)
T cd06620 145 LCDFGVSG 152 (284)
T ss_pred EccCCccc
Confidence 99999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=268.51 Aligned_cols=148 Identities=19% Similarity=0.248 Sum_probs=125.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||.|++|.||+|.+. .+++.+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPN-PDLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCc-hHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 46899999999999999999972 3578899999875422 22333444 899999999999999999
Q ss_pred eEEEeC--CEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 184 GLLKTS--GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 184 ~~~~~~--~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++|... +.+|+||||+++ +|.+++.. .....+++..+..++.||+.||.|||++|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 998654 479999999985 99888753 2345678999999999999999999999999999999999999998 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||++.
T Consensus 144 ~~l~dfg~~~ 153 (287)
T cd06621 144 VKLCDFGVSG 153 (287)
T ss_pred EEEeeccccc
Confidence 9999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=273.33 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=125.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.|+..+.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccc-hHHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 45778899999999999999862 4568899999865322 22223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ +|.+++. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999995 9998886 34678999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06642 144 DFGVAG 149 (277)
T ss_pred cccccc
Confidence 999987
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=266.97 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=117.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHh-hccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|.+. .+++.+|+|.+.+...... ...... .|..+ ....+||||+++++++.
T Consensus 2 ~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~~ 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSFQ 67 (260)
T ss_pred ccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeEE
Confidence 67999999999999862 3568899999865432221 112222 45444 34558999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~ 143 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFGL 143 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeeccc
Confidence 99999999999985 99999973 45689999999999999999999999999999999999999988 899999998
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 144 ~~ 145 (260)
T cd05611 144 SR 145 (260)
T ss_pred ce
Confidence 87
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=268.44 Aligned_cols=145 Identities=18% Similarity=0.199 Sum_probs=125.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-|+..+.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccc-hHHHHHHH--------HHHHHHHhcCCCCEeEEE
Confidence 34778899999999999999862 3578999999865322 22223343 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ +|.+++. ...++...+..++.|++.|+.|||++|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~ 143 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLA 143 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEe
Confidence 999999999999999995 8998886 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06641 144 DFGVAG 149 (277)
T ss_pred ecccce
Confidence 999887
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-27 Score=283.09 Aligned_cols=198 Identities=14% Similarity=0.183 Sum_probs=160.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.++..........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~ 67 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQ 67 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCccee
Confidence 46999999999999999999862 45789999999764332222333333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~ 144 (330)
T cd05601 68 YAFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLA 144 (330)
T ss_pred eEEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEec
Confidence 99999999999999998 5999999842 35789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc------ccccccccccccccccchHHHHhh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~------~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
|||+++........ ......||+.|+|||++. ...|+.++|+|+.|+|. |+++++
T Consensus 145 Dfg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~el~~g 205 (330)
T cd05601 145 DFGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA-YEMIYG 205 (330)
T ss_pred cCCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeeccccee-eeeccC
Confidence 99999853211110 011224788999999986 56678899999999876 444433
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=272.88 Aligned_cols=148 Identities=20% Similarity=0.243 Sum_probs=124.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46777889999999999999862 45789999998754322 2333344 8999999996 9999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceE
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQ---FSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~---~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++++..++..+++|||+++++.++.. ......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 99999999999999999987666543 2234678999999999999999999998 5999999999999999988 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 147 ~kl~dfg~~~ 156 (288)
T cd06616 147 IKLCDFGISG 156 (288)
T ss_pred EEEeecchhH
Confidence 9999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=269.33 Aligned_cols=148 Identities=23% Similarity=0.225 Sum_probs=128.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|++......... ...+. +|+++++.++ ||||++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~~i~~ 66 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK--------IEKEVLTRLNGHPGIIK 66 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH--------HHHHHHHhcccCCCchh
Confidence 47999999999999999999862 46789999998764332222 22333 8999999998 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+++||||++ ++|.+++.. .+.+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~ 142 (280)
T cd05581 67 LYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIK 142 (280)
T ss_pred HHHHhcCCceEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEE
Confidence 9999999999999999996 699999983 45789999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||++..
T Consensus 143 l~df~~~~~ 151 (280)
T cd05581 143 ITDFGTAKV 151 (280)
T ss_pred ecCCccccc
Confidence 999999984
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-28 Score=263.92 Aligned_cols=206 Identities=18% Similarity=0.176 Sum_probs=173.7
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 178 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpN 178 (1620)
.-...+|.++++||+|+|++|.+++.. .+.+++|+|++++.-....+..++++ .|..+.... +||.
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~pf 312 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNNPF 312 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCCCe
Confidence 334679999999999999999998863 35689999999987666655556665 677766555 7999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+|-|+.+|+++..+++|.||.+| +|.-.++ +.+.++++++++|..+|+.||.|||++|||.||||.+|+||+..|
T Consensus 313 lvglhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg-- 388 (593)
T KOG0695|consen 313 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG-- 388 (593)
T ss_pred EEehhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--
Confidence 99999999999999999999995 8887777 567899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
++||+|+|+++........+ ++.| |||.|.|||++.+..|+..+|+|..|. ..+++.+||++
T Consensus 389 hikltdygmcke~l~~gd~t----------stfc-gtpnyiapeilrgeeygfsvdwwalgv-------lmfemmagrsp 450 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGPGDTT----------STFC-GTPNYIAPEILRGEEYGFSVDWWALGV-------LMFEMMAGRSP 450 (593)
T ss_pred ceeecccchhhcCCCCCccc----------cccc-CCCcccchhhhcccccCceehHHHHHH-------HHHHHHcCCCC
Confidence 99999999999654332211 2334 599999999999999999999999994 45667789987
Q ss_pred CCC
Q 000355 338 GDY 340 (1620)
Q Consensus 338 ~dl 340 (1620)
.|+
T Consensus 451 fdi 453 (593)
T KOG0695|consen 451 FDI 453 (593)
T ss_pred cce
Confidence 664
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=267.56 Aligned_cols=144 Identities=16% Similarity=0.278 Sum_probs=124.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC---cccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~---HpNIv~ 181 (1620)
.|+..+.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+++++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4788899999999999999962 457899999986532 222333344 7999988886 999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++..++||||++| +|.++++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999985 99998873 3688999999999999999999999999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||++.
T Consensus 142 l~dfg~~~ 149 (277)
T cd06917 142 LCDFGVAA 149 (277)
T ss_pred EccCCcee
Confidence 99999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=284.51 Aligned_cols=203 Identities=17% Similarity=0.167 Sum_probs=158.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+... ....++..||+|++.... .......+. +|+.+|+.+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGI-DKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEecc-CCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 46899999999999999999985211 112456789999987532 222333444 899999999 8999999
Q ss_pred eeeEEEeCC-EEEEEEeCCC-CCHHHHHhhCC------------------------------------------------
Q 000355 182 VLGLLKTSG-LITSVIPKTP-YTLENILQFSP------------------------------------------------ 211 (1620)
Q Consensus 182 l~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------ 211 (1620)
+++++...+ .+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 999887654 6899999999 59999997421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCC
Q 000355 212 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 279 (1620)
Q Consensus 212 ------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~ 279 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12467788889999999999999999999999999999999988 89999999998432111000
Q ss_pred CCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 280 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 280 ~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
......+++.|||||++.+..|+.++|+|+.|++. |++++
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~el~~ 271 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIFS 271 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH-HHHHh
Confidence 01123356789999999999999999999999776 55553
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=264.77 Aligned_cols=146 Identities=21% Similarity=0.250 Sum_probs=128.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+++|++...... .....+. +|+.++..++||||++++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCY 65 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEE
Confidence 36889999999999999999872 35789999998764322 2233444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++...+.+++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l 141 (264)
T cd06623 66 GAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKI 141 (264)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 599999984 3678999999999999999999999 9999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 142 ~df~~~~ 148 (264)
T cd06623 142 ADFGISK 148 (264)
T ss_pred ccCccce
Confidence 9999887
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=282.59 Aligned_cols=255 Identities=20% Similarity=0.371 Sum_probs=220.5
Q ss_pred EEEEcCCCCEEEEeCC-CceeEE-eecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeE
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~-g~~l~t-l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~s 1320 (1620)
+.+++.|.++++||.. +..+.+ +.||.+.|++++|..-+.++++||. |+|+|+||..+|+|..++.||.+.|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 8999999999999987 777777 9999999999999987889999997 999999999999999999999999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCce
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1398 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1398 (1620)
+... ...+ +|.|.+|++||+.+|+++.++.+|. +. |
T Consensus 297 ~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~------------------------------~~----------V 334 (537)
T KOG0274|consen 297 LTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHT------------------------------GP----------V 334 (537)
T ss_pred EEcc--CceEeeccCCceEEEEeccCcceEEEecccc------------------------------cc----------E
Confidence 9853 3334 5579999999999999999887642 23 4
Q ss_pred EEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcE
Q 000355 1399 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1478 (1620)
Q Consensus 1399 t~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I 1478 (1620)
.|+..+ +..+++|+.|++|++||+.++++++++.+|.. .|.++.+.+. +.+++|+.|++|
T Consensus 335 ~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~------~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 335 NCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG------RVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred EEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcc------eEEEEEecCc------------ceEEeeeeccce
Confidence 444444 67999999999999999999999999997654 5788765321 589999999999
Q ss_pred EEEECCCC-cEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeec-CCCCEEEEeecCCEEEEEe
Q 000355 1479 RLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISIS 1556 (1620)
Q Consensus 1479 ~lwD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgs 1556 (1620)
++||++++ +++.++.+|..-|..+. ..++.|+|++.|++|++||..++ .++.++.+ |...|.++......+++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~-~~~~~Lvs~~aD~~Ik~WD~~~~--~~~~~~~~~~~~~v~~l~~~~~~il~s~ 471 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLL-LRDNFLVSSSADGTIKLWDAEEG--ECLRTLEGRHVGGVSALALGKEEILCSS 471 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccc-cccceeEeccccccEEEeecccC--ceeeeeccCCcccEEEeecCcceEEEEe
Confidence 99999999 99999999999997765 34779999999999999999998 67778888 7788988777777788888
Q ss_pred CCc-eEEEecc
Q 000355 1557 NNK-IGLSSLS 1566 (1620)
Q Consensus 1557 ~D~-I~vwdl~ 1566 (1620)
.|+ +++||+.
T Consensus 472 ~~~~~~l~dl~ 482 (537)
T KOG0274|consen 472 DDGSVKLWDLR 482 (537)
T ss_pred cCCeeEEEecc
Confidence 888 9999987
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=274.37 Aligned_cols=144 Identities=19% Similarity=0.205 Sum_probs=119.3
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
.+.+.+|.|+++.|+++. .+++.+|+|++............+. +|+++++.++||||+++++++
T Consensus 5 ~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhee
Confidence 344455555555555543 3678999999976533333344444 899999999999999999999
Q ss_pred EeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..++..+++|||++ ++|.+++.......+++..++.+++|+++||+|||+++|+||||||+|||++.++ .+||+|||
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~~ 146 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGLR 146 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecCc
Confidence 99999999999999 5999999854455688999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
.+.
T Consensus 147 ~~~ 149 (314)
T cd08216 147 YSV 149 (314)
T ss_pred cce
Confidence 887
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-26 Score=267.56 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=123.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|...+.||+|++|.||++.+. .++..+++|.+.... ......+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccc--hhHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4555679999999999999862 356889999886422 22223333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++|+||++| +|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999985 99999873 5678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 159 ~g~~~ 163 (285)
T cd06648 159 FGFCA 163 (285)
T ss_pred cccch
Confidence 99876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=271.70 Aligned_cols=145 Identities=15% Similarity=0.134 Sum_probs=125.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 578999999999999999999852 3567899999864322 2223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..|+|+||+++ +|.+++. ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999987 33578889999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 157 ~dfg~~~ 163 (293)
T cd06647 157 TDFGFCA 163 (293)
T ss_pred ccCccee
Confidence 9999887
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=270.85 Aligned_cols=146 Identities=23% Similarity=0.272 Sum_probs=127.2
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|++|.||+|.+. .+++.+++|.+............+. +|+++|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 677889999999999999862 4578899999876433322233343 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+..++.+++||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 9999999999999999999998742 35789999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
.+.
T Consensus 144 ~~~ 146 (283)
T cd05118 144 LAR 146 (283)
T ss_pred eeE
Confidence 887
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=246.13 Aligned_cols=278 Identities=18% Similarity=0.270 Sum_probs=224.7
Q ss_pred EEeecccCcEEEEEEcc---CCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcE
Q 000355 1263 SSIRAHHGALRSVAVGQ---DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1337 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafsp---dg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV 1337 (1620)
.+..||+.+|-.++||| +|-+|+|++. |+.--+-+-+||.-+.+|.||.++|++.+.+.+..+. ++.|-+.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~k----d~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASK----DGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEecc----CCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchh
Confidence 35679999999999984 8899999998 8988888999999999999999999999986665555 4559999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dg 1417 (1620)
++||.-+|..+..|... +.|..++|+.|.+.+++|+.++
T Consensus 84 kvw~a~tgdelhsf~hk-----------------------------------------hivk~~af~~ds~~lltgg~ek 122 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFEHK-----------------------------------------HIVKAVAFSQDSNYLLTGGQEK 122 (334)
T ss_pred hhhhhhhhhhhhhhhhh-----------------------------------------heeeeEEecccchhhhccchHH
Confidence 99999999988777632 2356677777899999999999
Q ss_pred cEEEEECCCCc-eeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC
Q 000355 1418 SLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1496 (1620)
Q Consensus 1418 tVrlwDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~ 1496 (1620)
-+|++|+...+ +...+.+ |+..|+.+-|+.+. +.|++.+.|++||+||.+||+.++++. ..
T Consensus 123 llrvfdln~p~App~E~~g------htg~Ir~v~wc~eD-----------~~iLSSadd~tVRLWD~rTgt~v~sL~-~~ 184 (334)
T KOG0278|consen 123 LLRVFDLNRPKAPPKEISG------HTGGIRTVLWCHED-----------KCILSSADDKTVRLWDHRTGTEVQSLE-FN 184 (334)
T ss_pred HhhhhhccCCCCCchhhcC------CCCcceeEEEeccC-----------ceEEeeccCCceEEEEeccCcEEEEEe-cC
Confidence 99999997653 3445554 45568888888544 578888999999999999999999998 57
Q ss_pred CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCC
Q 000355 1497 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADED 1572 (1620)
Q Consensus 1497 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~ 1572 (1620)
.+|+++. +++|++|.+ ...++|+.||..+- ..+..++-. -.|. +++|+...++.|+.|. ++.||+. +
T Consensus 185 s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf--~~lKs~k~P-~nV~SASL~P~k~~fVaGged~~~~kfDy~-----T 255 (334)
T KOG0278|consen 185 SPVTSLEVSQDGRILTI-AYGSSVKFWDAKSF--GLLKSYKMP-CNVESASLHPKKEFFVAGGEDFKVYKFDYN-----T 255 (334)
T ss_pred CCCcceeeccCCCEEEE-ecCceeEEeccccc--cceeeccCc-cccccccccCCCceEEecCcceEEEEEecc-----C
Confidence 8899999 999987655 45778999999886 333333322 2233 4999999999999999 9999986 3
Q ss_pred CcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1573 GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1573 g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
|..... ... +|-++|-++.|+|||...|+||+||+||||.
T Consensus 256 geEi~~------~nk--gh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 256 GEEIGS------YNK--GHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred Cceeee------ccc--CCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 332111 112 5899999999999999999999999999993
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-26 Score=264.83 Aligned_cols=280 Identities=18% Similarity=0.229 Sum_probs=239.5
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVW 1340 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IW 1340 (1620)
+++..|+..|.+|.|+|....++++- |.|+|.||+.+|...++.+.-..-+|.+..|...-+.+ +|.|..|+|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~L----ynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAAL----YNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEee----ecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEE
Confidence 45566999999999999999999887 58999999999999999999889999999999888877 6669999999
Q ss_pred eCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEE
Q 000355 1341 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1420 (1620)
Q Consensus 1341 D~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVr 1420 (1620)
+..|++.+.+|..|+ +.+.|++++|...+++++|.|-+|+
T Consensus 83 nynt~ekV~~FeAH~----------------------------------------DyIR~iavHPt~P~vLtsSDDm~iK 122 (794)
T KOG0276|consen 83 NYNTGEKVKTFEAHS----------------------------------------DYIRSIAVHPTLPYVLTSSDDMTIK 122 (794)
T ss_pred ecccceeeEEeeccc----------------------------------------cceeeeeecCCCCeEEecCCccEEE
Confidence 999999999998653 3477888888899999999999999
Q ss_pred EEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1421 FIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1421 lwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
+||-..+ .+.+++.|| ...|.+|+|.|. |.+.+|++|-|++|++|.+.+..+..+++||...|
T Consensus 123 lW~we~~wa~~qtfeGH------~HyVMqv~fnPk----------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV 186 (794)
T KOG0276|consen 123 LWDWENEWACEQTFEGH------EHYVMQVAFNPK----------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV 186 (794)
T ss_pred EeeccCceeeeeEEcCc------ceEEEEEEecCC----------CccceeeeeccccEEEEEcCCCCCceeeeccccCc
Confidence 9998764 677888875 456899999863 44899999999999999999999999999999999
Q ss_pred EEEE-eC--CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1500 TKLA-AP--EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1500 ~sva-sp--dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
+||. -+ |..+|+||++|.+|+|||.++. .++.++.||+..|++ |.|.-..++|||.|| +++|+...
T Consensus 187 N~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk--~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T------ 258 (794)
T KOG0276|consen 187 NCVDYYTGGDKPYLISGADDLTIKVWDYQTK--SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT------ 258 (794)
T ss_pred ceEEeccCCCcceEEecCCCceEEEeecchH--HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcc------
Confidence 9999 33 4459999999999999999998 788899999999994 888899999999999 99999531
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
- ...+.... ....|++++-.+.++.+++|.++|.|-|
T Consensus 259 -y--~lE~tLn~-----gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 259 -Y--KLEKTLNY-----GLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred -e--ehhhhhhc-----CCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 1 11111111 2346999999999999999999998754
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=280.09 Aligned_cols=194 Identities=21% Similarity=0.220 Sum_probs=155.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHH-HhhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei-~iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+...... ...++. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999962 4678999999875432221 222333 455 4678899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+||||+.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
++...... .. .....||+.|+|||++.+..|+.++|+|+.|++. |+++.+..+|.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~ 197 (321)
T cd05603 143 CKEGVEPE-----ET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVL-YEMLYGLPPFY 197 (321)
T ss_pred CccCCCCC-----Cc------cccccCCcccCCHHHhcCCCCCCcCcccccchhh-hhhhcCCCCCC
Confidence 88422111 00 1122368899999999999999999999999877 66665544443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-27 Score=280.43 Aligned_cols=193 Identities=20% Similarity=0.206 Sum_probs=155.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHH-hhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+|+.+|+|++.+..... .....+. +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 47999999999999862 467899999987542222 2222333 5554 577899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
++....... ......||+.|||||++.+..|+.++|+|+.|++. |+++++..+|
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~G~~pf 196 (325)
T cd05604 143 CKEGIAQSD-----------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVL-YEMLYGLPPF 196 (325)
T ss_pred cccCCCCCC-----------CcccccCChhhCCHHHHcCCCCCCcCcccccccee-hhhhcCCCCC
Confidence 974221110 01123378899999999999999999999999887 6666554444
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-26 Score=271.60 Aligned_cols=149 Identities=16% Similarity=0.170 Sum_probs=128.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||++++ ..++..+|+|.+....... +....+. +|+++++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~------~~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARD------VRTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEE------cCCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 44588899999999999999986 2357899999987543322 2223344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++..++..++||||++|+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888864 345688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 167 ~dfg~~~ 173 (317)
T cd06635 167 ADFGSAS 173 (317)
T ss_pred ecCCCcc
Confidence 9999876
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=281.35 Aligned_cols=202 Identities=14% Similarity=0.088 Sum_probs=161.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++++. ..++.+|+|.+.+...........++ +|+.++..++|+||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 47999999999999999999862 35688999998653222222222232 799999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++ |+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 599999974 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-----ccccccccccccccccchHHHHhhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
|||+++........ ......||+.|||||++. ...|+.++|+|+.|++. |+++++..+|
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil-~ell~g~~Pf 208 (332)
T cd05623 145 DFGSCLKLMEDGTV----------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM-YEMLYGETPF 208 (332)
T ss_pred ecchheecccCCcc----------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH-HHHhcCCCCC
Confidence 99999743211100 011234789999999886 34688899999999776 6666544444
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-26 Score=263.87 Aligned_cols=135 Identities=20% Similarity=0.202 Sum_probs=116.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-----c--
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-----H-- 176 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----H-- 176 (1620)
.+|.+.++||-|-|++||+|.| ....+.||+|+.+...... + .++.||++|++++ |
T Consensus 78 gRY~v~rKLGWGHFSTVWLawD------tq~~r~VAlKVvKSAqhYt---E--------aAlDEIklL~~v~~~Dp~~~~ 140 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWD------TQNKRYVALKVVKSAQHYT---E--------AALDEIKLLQQVREGDPNDPG 140 (590)
T ss_pred ceEEEEEeccccccceeEEEee------ccCCeEEEEEEEehhhHHH---H--------HHHHHHHHHHHHHhcCCCCCC
Confidence 5899999999999999999998 2456899999986533222 1 2458999999984 3
Q ss_pred -ccccceeeEEEeC----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceE
Q 000355 177 -PNVAPVLGLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVL 250 (1620)
Q Consensus 177 -pNIv~l~~~~~~~----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NIL 250 (1620)
..||+|++.|... .+++||+|+++.+|..+|+++..+.++...++.|++|||.||.|||+ .||||-||||+|||
T Consensus 141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL 220 (590)
T KOG1290|consen 141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL 220 (590)
T ss_pred CceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence 3699999999865 39999999999999999999888899999999999999999999998 79999999999999
Q ss_pred ecCCC
Q 000355 251 LTDSC 255 (1620)
Q Consensus 251 l~~~~ 255 (1620)
+..+.
T Consensus 221 l~~~e 225 (590)
T KOG1290|consen 221 LCSTE 225 (590)
T ss_pred eeccc
Confidence 97663
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=268.87 Aligned_cols=146 Identities=21% Similarity=0.208 Sum_probs=125.6
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccceee
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 184 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~~ 184 (1620)
|++.+.||+|+||+||+|... .+++.++||.+...... ....... +|+..+++++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999999962 34688999998653222 1111222 7999999999 999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++..++..++||||++|+|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++ .+||+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999999854445789999999999999999999999999999999999999988 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 ~~~~ 147 (283)
T cd07830 144 GLAR 147 (283)
T ss_pred ccce
Confidence 9887
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=280.05 Aligned_cols=202 Identities=20% Similarity=0.201 Sum_probs=162.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.....||+|+||.||+|.- .++..||||++....... .++|. +|+.+|.+++|||+|+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-------~~~~~vAVK~~~~~~~~~--~~eF~--------~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-------SDGTVVAVKRLSSNSGQG--EREFL--------NEVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-------CCCCEEEEEEecCCCCcc--hhHHH--------HHHHHHhcCCCcCcccE
Confidence 35888889999999999999884 667999999887643321 44566 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHRDLKP~NILl~~~~~~ 257 (1620)
+|+|.+.+ ..+||+|||+ |+|.+++.......++-.....|+.++++||+|||.. .||||||||+|||+|++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999998 5999999999 7999999853322554444456999999999999994 499999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
.+||+|||+|+..... ... . .+...||..|+|||.......+.++|+++.| +..+..++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~~~----~-----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG-------VvllElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-DTS----V-----STTVMGTFGYLAPEYASTGKLTEKSDVYSFG-------VVLLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-ccc----e-----eeecCCCCccCChhhhccCCcCcccccccch-------HHHHHHHhCCcc
Confidence 8999999999743210 000 0 0000488899999999988999999999999 455666888865
Q ss_pred CCC
Q 000355 338 GDY 340 (1620)
Q Consensus 338 ~dl 340 (1620)
.|.
T Consensus 278 ~d~ 280 (361)
T KOG1187|consen 278 VDQ 280 (361)
T ss_pred cCC
Confidence 443
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=279.72 Aligned_cols=194 Identities=20% Similarity=0.214 Sum_probs=154.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHH-HhhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei-~iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.+|+|++.+..... ....+.. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIM--------SERNVLLKNVKHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHH--------HHHHHHHHhCCCCCCCceeEEEE
Confidence 47999999999999862 457889999987532221 1122233 444 4568899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~ 142 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGL 142 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9999997 356688999999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
++....... . .....||+.|||||++.+..|+.++|+|+.|++. |+++++..+|.
T Consensus 143 a~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~ 197 (325)
T cd05602 143 CKENIEHNG-----T------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL-YEMLYGLPPFY 197 (325)
T ss_pred CcccccCCC-----C------cccccCCccccCHHHHcCCCCCCccccccccHHH-HHHhcCCCCCC
Confidence 984321110 0 1122378899999999999999999999999876 66665544443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-28 Score=281.47 Aligned_cols=184 Identities=17% Similarity=0.198 Sum_probs=155.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCC-CCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|.-++.||.|+||.||-|++. .+.++||||++... +.+.+.-.+.+ +|+.+|+.++|||+|.
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntie 90 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIE 90 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCccc
Confidence 346788899999999999999973 45689999999753 23333334444 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.++|..+...|||||||-|+-.|++.- ..+++-+.++..|..+.+.||.|||+.+.||||||..|||+++.| .|||
T Consensus 91 YkgCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKL 167 (948)
T KOG0577|consen 91 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKL 167 (948)
T ss_pred ccceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeee
Confidence 9999999999999999999977777764 346788999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---cccccccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRG 318 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G 318 (1620)
+|||.|.... ++ .+..|||+|||||++. ...|+.++|+|+.|
T Consensus 168 aDFGSAsi~~-------PA--------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG 212 (948)
T KOG0577|consen 168 ADFGSASIMA-------PA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 212 (948)
T ss_pred ccccchhhcC-------ch--------hcccCCccccchhHheeccccccCCccceeecc
Confidence 9999987432 11 2345899999999875 56799999999999
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=279.17 Aligned_cols=191 Identities=19% Similarity=0.186 Sum_probs=154.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|.+++...........+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 46999999999999862 45789999999864333222222222 788888766 79999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||+++ +|..++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999994 9988887 356789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhh
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+........ .....||+.|+|||++.+..|+.++|+|+.|++. |+++++.
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~ 193 (329)
T cd05618 144 KEGLRPGDT-----------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGR 193 (329)
T ss_pred ccccCCCCc-----------cccccCCccccCHHHHcCCCCCCccceecccHHH-HHHhhCC
Confidence 842211100 1112368899999999999999999999999775 5555433
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=267.88 Aligned_cols=146 Identities=23% Similarity=0.283 Sum_probs=126.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|+..+.||+|.||.||+|.+ ..+++.+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~------~~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARD------KKTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeee------cCCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 66788999999999999986 23578999999976532222223333 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+...+..++||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 9999999999999999999999842 24689999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 144 ~~~ 146 (282)
T cd07829 144 LAR 146 (282)
T ss_pred ccc
Confidence 987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=268.65 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||+|++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 446888899999999999999962 357889999986532222 2233344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++...+..++||||+.|+|.+++.. ....+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 9999999999999999999999888864 345578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 157 ~dfg~~~ 163 (308)
T cd06634 157 GDFGSAS 163 (308)
T ss_pred CCcccce
Confidence 9999887
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=258.11 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=128.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 4788999999999999999862 3678999999876544333334444 8999999999999999999
Q ss_pred EEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+... +.+++||||++ ++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99988 89999999997 599999984 33789999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||.+.
T Consensus 143 ~d~~~~~ 149 (260)
T cd06606 143 ADFGCAK 149 (260)
T ss_pred cccccEE
Confidence 9999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=257.60 Aligned_cols=146 Identities=21% Similarity=0.288 Sum_probs=128.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||++.+. ..++.+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5889999999999999999862 3568899999977544323333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+++..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999985 99999983 46789999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 143 ~~~~~ 147 (254)
T cd06627 143 FGVAT 147 (254)
T ss_pred cccce
Confidence 99987
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-26 Score=267.50 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=122.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|+....||+|+||.||++... .++..+|+|++.... ......+. +|+.+++.++||||+++++
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 84 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYN 84 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheee
Confidence 3444578999999999998862 467899999985432 22233344 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+...+..++||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .++|+|
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~d 159 (292)
T cd06657 85 SYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSD 159 (292)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999986 8888775 34578999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 160 fg~~~ 164 (292)
T cd06657 160 FGFCA 164 (292)
T ss_pred cccce
Confidence 99876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=277.83 Aligned_cols=194 Identities=18% Similarity=0.174 Sum_probs=156.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999999862 45789999999864333322222222 899998888 69999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||++| +|..++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999985 9998887 345789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
+........ .....||+.|+|||++.+..|+.++|+|+.|++. |+++++..+|
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~ell~g~~pf 196 (327)
T cd05617 144 KEGLGPGDT-----------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM-FEMMAGRSPF 196 (327)
T ss_pred eeccCCCCc-----------eecccCCcccCCHHHHCCCCCCchheeehhHHHH-HHHHhCCCCC
Confidence 842211100 1122368899999999999999999999999776 6655544443
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=244.55 Aligned_cols=333 Identities=18% Similarity=0.216 Sum_probs=234.5
Q ss_pred EEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEE
Q 000355 1243 LGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1322 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~ 1322 (1620)
|++.=.|+++. ..+++.+.||.+.|+.|+......++.++|. |.+.+||.+++|+|+.+|.||.+.|++|+
T Consensus 127 ivssFk~~t~~-----~~lvre~~GHkDGiW~Vaa~~tqpi~gtASA----DhTA~iWs~Esg~CL~~Y~GH~GSVNsik 197 (481)
T KOG0300|consen 127 IVSSFKDGTVK-----FRLVRELEGHKDGIWHVAADSTQPICGTASA----DHTARIWSLESGACLATYTGHTGSVNSIK 197 (481)
T ss_pred heeeecCCcee-----EeehhhhcccccceeeehhhcCCcceeeccc----ccceeEEeeccccceeeecccccceeeEE
Confidence 44554555543 2467889999999999999888889999998 89999999999999999999999999999
Q ss_pred EeeCCCeE--EEeCCcEEEEeCCCC----ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEee--c
Q 000355 1323 VLSSSGRI--ASCDGTLHVWNSQTG----KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF--D 1394 (1620)
Q Consensus 1323 f~~~~~~l--aS~DgtV~IWD~~tg----~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f--~ 1394 (1620)
|++.+..+ +|+|++.+||...-. +.... ..|+....... +... ............++-.+.-..+ +
T Consensus 198 fh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~-~~hSsEeE~e~--sDe~---~~d~d~~~~sD~~tiRvPl~~ltgH 271 (481)
T KOG0300|consen 198 FHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAP-SDHSSEEEEEH--SDEH---NRDTDSSEKSDGHTIRVPLMRLTGH 271 (481)
T ss_pred eccccceEEEccCCcchHHHHHhhcCcCCCCCCC-CCCCchhhhhc--cccc---ccccccccccCCceeeeeeeeeecc
Confidence 99988877 788999999973211 10000 00000000000 0000 0000000111112222222222 3
Q ss_pred CCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEec
Q 000355 1395 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1474 (1620)
Q Consensus 1395 ~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~ 1474 (1620)
...|.|..|-..|+.+++++.|.+..+||+++|+.++.+.||.....|. +- .|...++++.+.
T Consensus 272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHc------st-----------HptQrLVvTsSr 334 (481)
T KOG0300|consen 272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHC------ST-----------HPTQRLVVTSSR 334 (481)
T ss_pred ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhcccc------cc-----------CCcceEEEEecc
Confidence 3446667777789999999999999999999999999999988765442 22 256689999999
Q ss_pred CCcEEEEECCCC-cEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCE
Q 000355 1475 SGQCRLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD 1551 (1620)
Q Consensus 1475 Dg~I~lwD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~ 1551 (1620)
|.+.++||++.. ..+..|+||...|+++...-+..++|||.|.+|++||+++.+ ..+.+++. .++++ +++-.+..
T Consensus 335 DtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-splATIRt-dS~~NRvavs~g~~i 412 (481)
T KOG0300|consen 335 DTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-SPLATIRT-DSPANRVAVSKGHPI 412 (481)
T ss_pred CceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-Ccceeeec-CCccceeEeecCCce
Confidence 999999999943 457789999999999996566789999999999999999874 45556653 34455 46666677
Q ss_pred EEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCC--EEEEEeCCCcEEEc
Q 000355 1552 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~--lLasgs~DG~IrlW 1619 (1620)
++.--+++ |++||+.. +-. .++-... ..+|...|.+++|+-+.. -|.+||.|..+.=|
T Consensus 413 IAiPhDNRqvRlfDlnG------~Rl---aRlPrts-RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW 473 (481)
T KOG0300|consen 413 IAIPHDNRQVRLFDLNG------NRL---ARLPRTS-RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGW 473 (481)
T ss_pred EEeccCCceEEEEecCC------Ccc---ccCCccc-ccccceeeeeeeccccCcccccccccccceeeee
Confidence 77778888 99999862 211 1111111 126999999999986543 37789999988777
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=261.67 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=120.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||++++. .+++.+++|.+.......+. ...+. +|+++++.++||||+++++.+..++
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999999962 35789999998764332222 22333 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..|+||||+++ +|.+++.. .+.+++..+..++.||+.||.|||++||+||||+|+||+++.++ .+||+|||++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~ 141 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSK 141 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccch
Confidence 99999999985 99999984 34789999999999999999999999999999999999999999 89999999987
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-26 Score=289.48 Aligned_cols=174 Identities=17% Similarity=0.034 Sum_probs=115.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|++.... ...+..||+|++....... ... .| .+....+.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~--~~~~~~vAvK~~~~~~~~e----~~~--------~e--~l~~~~~~~~~~ 193 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQ--SKKEGKYVLKKATEYGAVE----IWM--------NE--RVRRACPNSCAD 193 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCc--cccCcEEEEEEecccchhH----HHH--------HH--HHHhhchhhHHH
Confidence 4679999999999999999999973221 1237899999876422111 111 11 111122233333
Q ss_pred eeeE------EEeCCEEEEEEeCCCC-CHHHHHhhCCC------------------CCCCHHHHHHHHHHHHHHHHHHHh
Q 000355 182 VLGL------LKTSGLITSVIPKTPY-TLENILQFSPN------------------ALKSEWHVRFLMYQLLSAIAYLHS 236 (1620)
Q Consensus 182 l~~~------~~~~~~~~lV~E~~~g-~L~~~l~~~~~------------------~~l~~~~i~~i~~qil~aL~yLH~ 236 (1620)
++.. ...+..+++||||+++ +|.+++..... ....+..++.++.||+.||.|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222 2345689999999994 99998873211 011234467899999999999999
Q ss_pred CCceecCCCCCceEecC-CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 237 LGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 237 ~gIiHRDLKP~NILl~~-~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+||+||||||+|||++. ++ .+||+|||+|+........ ......+|+.|||||.+
T Consensus 274 ~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 99999999999999986 45 7999999999843211100 01123367789999864
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-25 Score=275.96 Aligned_cols=273 Identities=22% Similarity=0.348 Sum_probs=225.6
Q ss_pred Eeec-ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEE-EecCCcceeEEEEeeCCCeE--EEeCCcEEE
Q 000355 1264 SIRA-HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-YYGHEEVVNDICVLSSSGRI--ASCDGTLHV 1339 (1620)
Q Consensus 1264 tl~g-H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~-l~gH~~~V~sV~f~~~~~~l--aS~DgtV~I 1339 (1620)
.+.+ |...|.+..|+ +.++++|+. |++|++||..++..+.+ +.||.+.|.++++...+..+ +|.|.|+++
T Consensus 202 ~~~~~~~~~~~~~q~~--~~~~~~~s~----~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 202 VLLGTDDHVVLCLQLH--DGFFKSGSD----DSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERV 275 (537)
T ss_pred eecccCcchhhhheee--cCeEEecCC----CceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEe
Confidence 3444 56678888888 447888886 89999999999999888 99999999999996645555 666999999
Q ss_pred EeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcE
Q 000355 1340 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1419 (1620)
Q Consensus 1340 WD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtV 1419 (1620)
||..+|+|..++.+|... +.++.. .+..+++|+.|.+|
T Consensus 276 Wd~~sg~C~~~l~gh~st------------------------------v~~~~~------------~~~~~~sgs~D~tV 313 (537)
T KOG0274|consen 276 WDCSTGECTHSLQGHTSS------------------------------VRCLTI------------DPFLLVSGSRDNTV 313 (537)
T ss_pred EecCCCcEEEEecCCCce------------------------------EEEEEc------------cCceEeeccCCceE
Confidence 999999999999876422 222222 24578889999999
Q ss_pred EEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1420 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1420 rlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
++||+.++.+++++.+|. ..|+++... +.++++|+.||+|++||+++++++.++.||.+.|
T Consensus 314 kVW~v~n~~~l~l~~~h~------~~V~~v~~~-------------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V 374 (537)
T KOG0274|consen 314 KVWDVTNGACLNLLRGHT------GPVNCVQLD-------------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRV 374 (537)
T ss_pred EEEeccCcceEEEecccc------ccEEEEEec-------------CCEEEEEecCceEEEEEhhhceeeeeecCCcceE
Confidence 999999999999998754 458888763 4689999999999999999999999999999999
Q ss_pred EEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCccee
Q 000355 1500 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1577 (1620)
Q Consensus 1500 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1577 (1620)
.++. ... ..+++||.|++|++||+++.. +++.++.+|..-|..+..+++.|++++.|+ |++||.. ++....
T Consensus 375 ~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~-~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~-----~~~~~~ 447 (537)
T KOG0274|consen 375 YSLIVDSE-NRLLSGSLDTTIKVWDLRTKR-KCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAE-----EGECLR 447 (537)
T ss_pred EEEEecCc-ceEEeeeeccceEeecCCchh-hhhhhhcCCcccccccccccceeEeccccccEEEeecc-----cCceee
Confidence 9997 433 899999999999999999874 677899999999999999999999999999 9999975 333322
Q ss_pred eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1578 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1578 ~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+. .+ +|.+.|+.+++. ...+++++.||.+++||
T Consensus 448 ~~-------~~-~~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 448 TL-------EG-RHVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ee-------cc-CCcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 11 11 155678887776 57888999999999996
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-26 Score=262.52 Aligned_cols=147 Identities=20% Similarity=0.191 Sum_probs=118.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecC---CCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE---GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~---~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|.+.+.||+|+||.||++.+.. .+..+++|.++. .........++. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC------CCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 58899999999999999998632 223344444433 222222222233 7999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++.+.+..++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++||+||||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999995 99988864 234568999999999999999999999999999999999999864 4
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 144 ~~l~d~g~~~ 153 (260)
T cd08222 144 LKIGDFGVSR 153 (260)
T ss_pred EeecccCcee
Confidence 9999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=237.94 Aligned_cols=277 Identities=19% Similarity=0.278 Sum_probs=229.4
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEE--EEecCCcceeEEEEeeCCCe-E--EEeCCcE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGR-I--ASCDGTL 1337 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~--~l~gH~~~V~sV~f~~~~~~-l--aS~DgtV 1337 (1620)
+.+++|...|.+|+|+.+|..+++|+. |+++++|++..++... .++||++.|..++|.|...- + +|+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSF----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeeccc----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 667899999999999999999999996 9999999998775554 35799999999999886543 3 6779999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dg 1417 (1620)
++||.++++++........ -..+.++|+|+++++++.|.
T Consensus 90 r~wd~r~~k~~~~i~~~~e-----------------------------------------ni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIETKGE-----------------------------------------NINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEeccCcEEEEeeccCc-----------------------------------------ceEEEEcCCCCEEEEecCcc
Confidence 9999999999877753211 13466788999999999999
Q ss_pred cEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCC
Q 000355 1418 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG 1497 (1620)
Q Consensus 1418 tVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~ 1497 (1620)
.|.+.|.++.+.....+ +.-.++.++|.. +++++......|+|.|....+.+++.++++|..
T Consensus 129 ~it~id~r~~~~~~~~~-------~~~e~ne~~w~~-----------~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s 190 (313)
T KOG1407|consen 129 RITFIDARTYKIVNEEQ-------FKFEVNEISWNN-----------SNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS 190 (313)
T ss_pred cEEEEEecccceeehhc-------ccceeeeeeecC-----------CCCEEEEecCCceEEEEeccccccccccccCCc
Confidence 99999999988776554 333466677652 334666666679999999999999999999998
Q ss_pred cEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1498 YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1498 ~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
...||. +|+|++||+||.|..+.+||+..- .+...+..+.-+|. +||.||++||+||.|. |-+-++. +|
T Consensus 191 nCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ve-----tG 263 (313)
T KOG1407|consen 191 NCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVE-----TG 263 (313)
T ss_pred ceEEEEECCCCceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecc-----cC
Confidence 888999 999999999999999999999876 66778888888998 5999999999999999 8777765 33
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCC---------CcEEEc
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED---------GYLRLC 1619 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~D---------G~IrlW 1619 (1620)
. +++.+. +.++...|+|+|...+||-+++| |+||+|
T Consensus 264 d------~~~eI~----~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 264 D------RVWEIP----CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred C------eEEEee----ccCCceeEEecCCCceeeEEecCCCCccccccceeEEe
Confidence 3 555543 77889999999999999988765 567765
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=258.02 Aligned_cols=148 Identities=20% Similarity=0.259 Sum_probs=128.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .+++.+|+|.+...........++. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 5889999999999999999862 4578899999876443333333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++......++||||+++ +|.+++... ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999985 999998742 235678899999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 145 ~d~g~~~ 151 (256)
T cd08530 145 GDLGISK 151 (256)
T ss_pred eeccchh
Confidence 9999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=284.02 Aligned_cols=198 Identities=17% Similarity=0.121 Sum_probs=161.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.-|...+.||+|+||.||++++ .++|+.||||.+++.. ......... +|+++|++|+|||||+++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrn------ketG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRN------KETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLF 77 (732)
T ss_pred cceeehhhhcCCccceeeeecc------cccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhc
Confidence 3456678999999999999986 2678999999997743 223333344 899999999999999999
Q ss_pred eEEEeCC------EEEEEEeCCC-CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec--C
Q 000355 184 GLLKTSG------LITSVIPKTP-YTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT--D 253 (1620)
Q Consensus 184 ~~~~~~~------~~~lV~E~~~-g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~--~ 253 (1620)
++-++.. ...+|||||. |||...++... ...+++.++..++..+..||.|||++||+||||||+||++- .
T Consensus 78 ~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 78 DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 9876544 5789999999 59999998633 35699999999999999999999999999999999999984 4
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHHhhh
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+|...-||+|||.||...... ...+..||+.|.+||+.. +..|+..+|.|+.|++. |+..++.
T Consensus 158 dgq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl-Y~caTG~ 221 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL-YECATGE 221 (732)
T ss_pred CCceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH-HHHhccC
Confidence 454567999999999543221 245566899999999999 58899999999999776 6555544
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=276.22 Aligned_cols=214 Identities=15% Similarity=0.068 Sum_probs=171.7
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
++-||.|+.|.||+|+- .++.||||+++.-+. .+|+-|++|+|||||.+.++|..
T Consensus 129 LeWlGSGaQGAVF~Grl--------~netVAVKKV~elkE-----------------TdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--------HNETVAVKKVRELKE-----------------TDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred hhhhccCcccceeeeec--------cCceehhHHHhhhhh-----------------hhHHHHHhccCcceeeEeeeecC
Confidence 67899999999999883 568899999864221 57888999999999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
...+|||||||. |-|.++|+ .+..++......|..+|+.|+.|||.+.|||||||.-||||+.+. .|||+|||.+
T Consensus 184 sPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFGTS 259 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFGTS 259 (904)
T ss_pred CceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEeccccch
Confidence 999999999999 79999999 567788888899999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCCCCcCCcccc
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMP 347 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~p 347 (1620)
+..... .+ .....||..|||||++.+.+.+.++|+|+.|.+. ||+|+.-- +|.|..+..|+=
T Consensus 260 ~e~~~~------ST------kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVL-WEmLT~Ei-----PYkdVdssAIIw 321 (904)
T KOG4721|consen 260 KELSDK------ST------KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVL-WEMLTGEI-----PYKDVDSSAIIW 321 (904)
T ss_pred Hhhhhh------hh------hhhhhhhHhhhCHHHhhcCCcccccceehhHHHH-HHHHhcCC-----CccccchheeEE
Confidence 843211 11 1223469999999999999999999999999776 77776543 356666665442
Q ss_pred eeeccC--CCCCCCCCCCCCCCCc
Q 000355 348 WVIDFS--TKPDENFDSGSRDLSK 369 (1620)
Q Consensus 348 wv~d~~--~~~~~~~~~~~rdlsk 369 (1620)
=|-... ..-+...|..|.-|-|
T Consensus 322 GVGsNsL~LpvPstcP~GfklL~K 345 (904)
T KOG4721|consen 322 GVGSNSLHLPVPSTCPDGFKLLLK 345 (904)
T ss_pred eccCCcccccCcccCchHHHHHHH
Confidence 222221 2224566666665543
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=252.77 Aligned_cols=277 Identities=13% Similarity=0.206 Sum_probs=231.6
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEE--------eecccCcEEEEEEccCCCEEEEeccC
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSS--------IRAHHGALRSVAVGQDECTVFTAGIG 1290 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~t--------l~gH~~~V~svafspdg~~LaSgs~d 1290 (1620)
.|.+.-+-+ |||||++ ++|||.||-|-+||.. |+..+. +--|.++|.|+.||.|...+|||+.
T Consensus 210 Fg~KSh~EcA~FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq- 283 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ- 283 (508)
T ss_pred cccccchhheeeCCCCce-----EeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc-
Confidence 344444544 9999998 9999999999999976 654433 3358899999999999999999998
Q ss_pred CCCCcEEEEEeCCCCeEEEEEe-cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCC
Q 000355 1291 PGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1367 (1620)
Q Consensus 1291 ~~~DgtVrLWdl~tg~~l~~l~-gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1367 (1620)
||.|++|.+.||.|++.|. .|+..|+|+.|+.++..+ +|.|.+|+|--+++|+++..+.+|+.
T Consensus 284 ---DGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS----------- 349 (508)
T KOG0275|consen 284 ---DGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS----------- 349 (508)
T ss_pred ---CCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc-----------
Confidence 9999999999999999987 899999999999999888 56699999999999999999988742
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccc
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~ 1447 (1620)
.|+...|++||..+++++.||+|++|+..+++|+.+|+.... ...|+
T Consensus 350 -----------------------------yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~----d~~vn 396 (508)
T KOG0275|consen 350 -----------------------------YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT----DYPVN 396 (508)
T ss_pred -----------------------------cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC----cccce
Confidence 245566777899999999999999999999999999985443 23466
Q ss_pred eEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc----CCcEEEEEeCCCCEEEEEeCCCcEEEEE
Q 000355 1448 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLAAPEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1448 sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH----~~~V~svaspdg~~LaSgS~DgtI~IWD 1523 (1620)
+|-..|. ++..++++...++|++-++. |+.++++... .+-|.++-+|.|.++.+.+.|+.++++.
T Consensus 397 sv~~~PK----------npeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~ 465 (508)
T KOG0275|consen 397 SVILLPK----------NPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFS 465 (508)
T ss_pred eEEEcCC----------CCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEE
Confidence 6665442 34688889999999999986 8888888632 2346666699999999999999999999
Q ss_pred CCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1524 LRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1524 l~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+.+| +.-.++..|...|.. -.|..+.+|+-+.|+ +++|.
T Consensus 466 ~~sG--~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 466 VLSG--KLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eecC--ceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 9998 555688888887774 678899999999999 99995
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=294.19 Aligned_cols=215 Identities=18% Similarity=0.123 Sum_probs=166.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+++|++.+.||+|+||.||+|++. .+++.||+|++......... .+++. +|+++++.++||||++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVk 66 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVP 66 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCe
Confidence 468999999999999999999872 35789999999764333222 23344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
+++++.+++..|+||||++| +|.+++.... ....+...+..++.||+.||+|||++||+||||||+|||+
T Consensus 67 l~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL 146 (932)
T PRK13184 67 VYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146 (932)
T ss_pred EEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE
Confidence 99999999999999999995 9999986311 1234556778899999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcccCCCCCcc--cCCCC-----CCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 252 TDSCWSWLYICDKPLVGFNSIADWC--TIPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~~~~~~~~--~~~~~-----~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
+.++ .+||+|||+++........ ..... ...........||+.|||||++.+..++.++|+|+.|++. |+
T Consensus 147 d~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVIL-yE 223 (932)
T PRK13184 147 GLFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL-YQ 223 (932)
T ss_pred cCCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 9998 8999999999854211100 00000 0000011223589999999999999999999999999887 77
Q ss_pred HHhhhhcccC
Q 000355 325 YLLFLNKLAG 334 (1620)
Q Consensus 325 yL~~ln~~~g 334 (1620)
++++..+|.+
T Consensus 224 LLTG~~PF~~ 233 (932)
T PRK13184 224 MLTLSFPYRR 233 (932)
T ss_pred HHHCCCCCCC
Confidence 7776655544
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=265.80 Aligned_cols=207 Identities=16% Similarity=0.119 Sum_probs=174.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
..+|..+.+||+|+||+|.+|.++ .+.+.+|||+++++-....+..+.. +.|-++|.... -|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999998852 3458899999998765544433332 47888888764 589999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|+.+|++-+.+|+||||+.| +|.-.|+ +-+.+.|..+.+|+.+|+-||-|||++|||.||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999995 9988888 578899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 338 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~ 338 (1620)
|+|||+++.+..... ++ .+.| |||-|+|||++.-++|+..+|+|+.|.+. ||+|.+-.+|.|..-.
T Consensus 491 i~DFGmcKEni~~~~-----TT-----kTFC-GTPdYiAPEIi~YqPYgksvDWWa~GVLL-yEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 491 IADFGMCKENIFDGV-----TT-----KTFC-GTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGEDED 556 (683)
T ss_pred eeecccccccccCCc-----ce-----eeec-CCCcccccceEEecccccchhHHHHHHHH-HHHHcCCCCCCCCCHH
Confidence 999999996543221 11 2334 59999999999999999999999999877 8888888777776543
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-27 Score=258.83 Aligned_cols=201 Identities=17% Similarity=0.170 Sum_probs=161.9
Q ss_pred cccccCCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-C
Q 000355 98 SCSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-R 175 (1620)
Q Consensus 98 ~~~~~~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~ 175 (1620)
....+.++|.+ -++||-|-.|+|..|.++ .+++.+|+|++.... + .. ||+++.-.. .
T Consensus 55 k~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~---K----AR--------rEVeLHw~~s~ 113 (400)
T KOG0604|consen 55 KEYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSP---K----AR--------REVELHWMASG 113 (400)
T ss_pred hcccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCH---H----HH--------hHhhhhhhhcC
Confidence 45566788887 589999999999998862 567899999985421 1 11 788775444 6
Q ss_pred cccccceeeEEEeC----CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 176 HPNVAPVLGLLKTS----GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 176 HpNIv~l~~~~~~~----~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
|||||.++++|++. ..+.+|||+|+| +|+..|.......++|.++..|++||..|+.|||+.+|.||||||||+|
T Consensus 114 h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 114 HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 99999999998753 478999999995 9999999777778999999999999999999999999999999999999
Q ss_pred ecCCCc-eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhh
Q 000355 251 LTDSCW-SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 251 l~~~~~-~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
....+. ..+||+|||+|+.... .+...+.|. ||+|.|||++....|+..+|+|+.|.|. |-+|+++
T Consensus 194 yt~t~~na~lKLtDfGFAK~t~~-----------~~~L~TPc~-TPyYvaPevlg~eKydkscdmwSlgVim-YIlLCGy 260 (400)
T KOG0604|consen 194 YTTTSPNAPLKLTDFGFAKETQE-----------PGDLMTPCF-TPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGY 260 (400)
T ss_pred eecCCCCcceEecccccccccCC-----------CccccCCcc-cccccCHHHhCchhcCCCCCccchhHHH-HHhhcCC
Confidence 976543 4899999999994321 112234454 8999999999999999999999999776 5555555
Q ss_pred hcc
Q 000355 330 NKL 332 (1620)
Q Consensus 330 n~~ 332 (1620)
.+|
T Consensus 261 PPF 263 (400)
T KOG0604|consen 261 PPF 263 (400)
T ss_pred Ccc
Confidence 443
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=273.13 Aligned_cols=198 Identities=16% Similarity=0.086 Sum_probs=164.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
...+.+.||+|+||+||+|.. .-.||||+++......+..+.|. +|+.++++-+|.||+-+.|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~w---------hGdVAVK~Lnv~~pt~~qlqaFK--------nEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRW---------HGDVAVKLLNVDDPTPEQLQAFK--------NEVAVLKKTRHENILLFMG 455 (678)
T ss_pred Hhhccceeccccccceeeccc---------ccceEEEEEecCCCCHHHHHHHH--------HHHHHHhhcchhhheeeeh
Confidence 566789999999999999884 24589999999877777666776 9999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..+.. .||.-+|+| +|+.+|+- ....|.....+.|++||++|+.|||.++|||||||..||++.+++ .|||+|
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIgD 531 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIGD 531 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEec
Confidence 9998877 999999998 99999984 345678888999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhhhccc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
|||+.....- ......... -|...|||||+++ ..+|+..+|+++.|.+. ||+++.--+++
T Consensus 532 FGLatvk~~w-~g~~q~~qp--------~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~-YELltg~lPys 594 (678)
T KOG0193|consen 532 FGLATVKTRW-SGEQQLEQP--------HGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW-YELLTGELPYS 594 (678)
T ss_pred ccceeeeeee-ccccccCCC--------ccchhhhcHHHHhhcccCCCCcccchhhhhHHH-HHHHhCcCCcC
Confidence 9999732211 111111111 1456799999886 56789999999999877 88887766655
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-25 Score=252.14 Aligned_cols=145 Identities=19% Similarity=0.267 Sum_probs=127.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+..+.||+|++|.||++.+. .+++.+++|++..... .....+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4888999999999999999962 3578899999876432 2233344 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..++++||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 9999999999999999 5999999742 25789999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||.+.
T Consensus 142 ~~~~~ 146 (253)
T cd05122 142 FGLSA 146 (253)
T ss_pred ccccc
Confidence 99887
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=269.90 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=159.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
.++|++.++||+|+||.||+|.+.... .....+..||+|.+.... ......++. +|+++|.
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHH--------HHHHHHh
Confidence 458999999999999999999853211 011245689999987632 233334455 8999999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHH
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSP-----------------NALKSEWHVRFLMYQLLSAIAYL 234 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~yL 234 (1620)
+++||||+++++++.+.+..++||||++ ++|.+++.... ...++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 59999986421 12356677889999999999999
Q ss_pred HhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccc
Q 000355 235 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 314 (1620)
Q Consensus 235 H~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~ 314 (1620)
|++||+||||||+|||++.++ .+||+|||+++........ .......++..|||||++.+..++.++|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYY---------RIQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCcee---------EecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999998 8999999999843211100 01122335678999999988899999999
Q ss_pred ccccccchHHHHh
Q 000355 315 WWRGELSNFEYLL 327 (1620)
Q Consensus 315 W~~G~isnfeyL~ 327 (1620)
|+.|++. |++++
T Consensus 224 ~slG~~l-~el~~ 235 (304)
T cd05096 224 WAFGVTL-WEILM 235 (304)
T ss_pred HHHHHHH-HHHHH
Confidence 9999776 55543
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-26 Score=274.88 Aligned_cols=189 Identities=18% Similarity=0.188 Sum_probs=149.5
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccC---CcccccceeeEEE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 187 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~l~~~~~ 187 (1620)
||+|+||+||+|++. .+++.||+|++.+..... ....... +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999999862 457899999986532221 1112222 677777665 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999984 9999987 456789999999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhccccc-ccccccccccccccchHHHHhhhh
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLN 330 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-~y~~~~d~W~~G~isnfeyL~~ln 330 (1620)
++........ .....||+.|||||++.+. .|+.++|+|+.|++. |+++++..
T Consensus 143 a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil-~elltG~~ 195 (330)
T cd05586 143 SKANLTDNKT-----------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV-FEMCCGWS 195 (330)
T ss_pred CcCCCCCCCC-----------ccCccCCccccCHHHHcCCCCCCCccceeccccEE-EEeccCCC
Confidence 9843211100 1122378899999988654 589999999999876 55554433
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-25 Score=244.65 Aligned_cols=277 Identities=19% Similarity=0.272 Sum_probs=217.4
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCe---E--EEeCCcEEEEe
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR---I--ASCDGTLHVWN 1341 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~---l--aS~DgtV~IWD 1341 (1620)
-|.+.|.+|... ++.++||+ |||++|+||.. |++..++.||+++|.+++|...+.. + ||.|.++++|.
T Consensus 103 ~hdDWVSsv~~~--~~~Iltgs----YDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~ 175 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGS----YDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWK 175 (423)
T ss_pred cchhhhhhhccc--CceEEEee----cCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEE
Confidence 399999999988 77999998 69999999984 8999999999999999998655443 4 56699999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEE
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1421 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrl 1421 (1620)
.+.++..-.... ...+|... |.++...++|..+++|+.|.+|++
T Consensus 176 ~~~~~~~~~~~~--------------------------~~~GHk~~----------V~sVsv~~sgtr~~SgS~D~~lki 219 (423)
T KOG0313|consen 176 WNVGENKVKALK--------------------------VCRGHKRS----------VDSVSVDSSGTRFCSGSWDTMLKI 219 (423)
T ss_pred ecCchhhhhHHh--------------------------Hhcccccc----------eeEEEecCCCCeEEeecccceeee
Confidence 887764321110 00022233 556666678999999999999999
Q ss_pred EECCCC-------------------------ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCC
Q 000355 1422 IDINQG-------------------------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG 1476 (1620)
Q Consensus 1422 wDl~tg-------------------------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg 1476 (1620)
|+..+. .++-++. +|...|.+|-|+. ...+.+++.|.
T Consensus 220 Ws~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~------GHt~~Vs~V~w~d------------~~v~yS~SwDH 281 (423)
T KOG0313|consen 220 WSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE------GHTEPVSSVVWSD------------ATVIYSVSWDH 281 (423)
T ss_pred cccCCCccccccccchhhhhhhhhhhcccccCceEEec------ccccceeeEEEcC------------CCceEeecccc
Confidence 993221 1122223 4666788888853 35799999999
Q ss_pred cEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC-CeEeecCCCCEEE--EeecC-CE
Q 000355 1477 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ-PTVFKGHTNGISG--FSVWG-QD 1551 (1620)
Q Consensus 1477 ~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~-~~~l~gH~~~V~a--fSpdg-~~ 1551 (1620)
+|+.||+.+|..+.++.+ ....+++. ++..++|++||.|..|++||.+++.... ..++.||.+.|.+ ++|.. ..
T Consensus 282 TIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~ 360 (423)
T KOG0313|consen 282 TIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQ 360 (423)
T ss_pred eEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceE
Confidence 999999999999988884 57899999 9999999999999999999999975433 3589999999996 78865 56
Q ss_pred EEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1552 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
|+|||.|+ +++||+...+ ..++... +|..-|.++.|+ .+..+++||.|++|+|+
T Consensus 361 ~~S~S~D~t~klWDvRS~k----------~plydI~---~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 361 LVSGSYDNTVKLWDVRSTK----------APLYDIA---GHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred EEEEecCCeEEEEEeccCC----------Ccceeec---cCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 89999999 9999986321 1344443 588899999997 67799999999999986
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=279.64 Aligned_cols=190 Identities=20% Similarity=0.110 Sum_probs=158.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|.+.+.||+|+||.||+|.+. ..++.||||..... ... +|+++|++|+|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCcE
Confidence 457999999999999999999972 34688999964321 122 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..++|||++.++|.+++.. ....++...++.|+.||+.||.|||++||+||||||+||||+.++ .+||+
T Consensus 226 ~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~ 302 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLG 302 (461)
T ss_pred EEEEEECCEEEEEEEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEc
Confidence 999999999999999999999999874 234689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++........ .......||+.|||||++.+..|+.++|+|+.|++. ||+++
T Consensus 303 DFGla~~~~~~~~~---------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL-~El~~ 357 (461)
T PHA03211 303 DFGAACFARGSWST---------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI-FEAAV 357 (461)
T ss_pred ccCCceeccccccc---------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH-HHHHH
Confidence 99999853221100 001123478999999999999999999999999886 66554
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=261.05 Aligned_cols=148 Identities=20% Similarity=0.235 Sum_probs=124.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|||.+...... ....+++ +|+.++.++ .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 578999999999999999999962 34788999999764322 2223333 677766666 4999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++.+...+|+||||++++|.+++... ...+++..+..++.||++||.|||+ +||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888887742 3478899999999999999999997 6999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 156 L~dfg~~~ 163 (296)
T cd06618 156 LCDFGISG 163 (296)
T ss_pred ECccccch
Confidence 99999987
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-26 Score=278.75 Aligned_cols=202 Identities=19% Similarity=0.145 Sum_probs=159.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|++... +...++..||+|.+..... ......+. +|+++++.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~-~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGL-GKEDNVLRVAVKMLKASAH-TDEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecC-CcccccceeEEEeccCCCC-HHHHHHHH--------HHHHHHHhhccCCceee
Confidence 45899999999999999999986322 2234567899999976432 22223334 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+.+++|||||+ |+|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 9999999999999999999 59999986321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCC
Q 000355 212 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 272 (1620)
Q Consensus 212 -------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~ 272 (1620)
...++...++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12467788899999999999999999999999999999999988 899999999984321
Q ss_pred CCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 273 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.... .....+.++..|||||++.+..|+.+.|+|+.|++. |+++
T Consensus 265 ~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil-~ell 308 (374)
T cd05106 265 DSNY---------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL-WEIF 308 (374)
T ss_pred Ccce---------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHH-HHHH
Confidence 1100 011223356679999999999999999999999765 5544
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-28 Score=258.72 Aligned_cols=191 Identities=21% Similarity=0.294 Sum_probs=157.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+.+..+.||-|+||+||-++| -++|+.||+|++..-...-...+. .++|+++|..++|.||+.+
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTD------PRdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSa 117 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTD------PRSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSL 117 (449)
T ss_pred cccCCCCCcccccceeEEEeccC------CCCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHH
Confidence 44667789999999999999887 257899999998643222222222 3499999999999999999
Q ss_pred eeEEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+++.+... .+|.|.|.|..||..+|- ....++..+++-+++||++||+|||+.||+||||||.|+|++++.
T Consensus 118 LDILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-- 193 (449)
T KOG0664|consen 118 LDILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-- 193 (449)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--
Confidence 99987654 689999999999999998 456789999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 321 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~is 321 (1620)
.+||||||+||........ .++.-.-|-+|+|||++.+ ..|+.++|+|+.|||.
T Consensus 194 vLKICDFGLARvee~d~~~----------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF 248 (449)
T KOG0664|consen 194 ILKICDFGLARTWDQRDRL----------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF 248 (449)
T ss_pred eEEecccccccccchhhhh----------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence 9999999999954322111 1233345789999998774 5699999999999995
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-25 Score=265.28 Aligned_cols=278 Identities=17% Similarity=0.279 Sum_probs=231.5
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEe
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWN 1341 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD 1341 (1620)
.++..+..|..++|+|.--+++++-- .|+|++||..-+.++..|.+|.++|..|+|+|....++|+ |-+|++|+
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslH----sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLH----SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWN 79 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeec----CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEe
Confidence 45566788999999999999999875 7999999999999999999999999999999999998766 88999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEE
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1421 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrl 1421 (1620)
.++.+|+.++.+|- ..|..+.|+ +.-..|+++|.|.|||+
T Consensus 80 Yk~rrclftL~GHl------------------------------DYVRt~~FH----------heyPWIlSASDDQTIrI 119 (1202)
T KOG0292|consen 80 YKTRRCLFTLLGHL------------------------------DYVRTVFFH----------HEYPWILSASDDQTIRI 119 (1202)
T ss_pred cccceehhhhcccc------------------------------ceeEEeecc----------CCCceEEEccCCCeEEE
Confidence 99999998888763 234444554 45679999999999999
Q ss_pred EECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC--------C-------
Q 000355 1422 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--------G------- 1486 (1620)
Q Consensus 1422 wDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t--------g------- 1486 (1620)
|+..+++++..+.||. ..|.|..|.|.. ..++++|-|.+||+||+.. |
T Consensus 120 WNwqsr~~iavltGHn------HYVMcAqFhptE-----------DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~ 182 (1202)
T KOG0292|consen 120 WNWQSRKCIAVLTGHN------HYVMCAQFHPTE-----------DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMR 182 (1202)
T ss_pred EeccCCceEEEEecCc------eEEEeeccCCcc-----------ceEEEecccceEEEEeecchhccCCCCCCchhhhh
Confidence 9999999999999764 458888887544 5899999999999999852 1
Q ss_pred ------------c--EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecC
Q 000355 1487 ------------N--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG 1549 (1620)
Q Consensus 1487 ------------~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg 1549 (1620)
. .-..+.||+..|+-++ +|.-.+++||++|..|++|.....+-=.+-+.+||.+.|++ |+|..
T Consensus 183 ~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q 262 (1202)
T KOG0292|consen 183 GQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQ 262 (1202)
T ss_pred ccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCcc
Confidence 1 1234679999999999 99889999999999999999876543345588999999997 89999
Q ss_pred CEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcE
Q 000355 1550 QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYL 1616 (1620)
Q Consensus 1550 ~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~I 1616 (1620)
.+++|.|.|+ |+|||+.+.. +. ..++ +..+.-+.++-+|...+||+|-+.|.+
T Consensus 263 ~lIlSnsEDksirVwDm~kRt---~v------~tfr-----rendRFW~laahP~lNLfAAgHDsGm~ 316 (1202)
T KOG0292|consen 263 DLILSNSEDKSIRVWDMTKRT---SV------QTFR-----RENDRFWILAAHPELNLFAAGHDSGMI 316 (1202)
T ss_pred ceeEecCCCccEEEEeccccc---ce------eeee-----ccCCeEEEEEecCCcceeeeecCCceE
Confidence 9999999999 9999997321 11 2221 234568999999999999999888765
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-25 Score=238.14 Aligned_cols=283 Identities=16% Similarity=0.292 Sum_probs=229.2
Q ss_pred ccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1218 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
...+.||.|.||.++.+... .+++|+|.|.+.+||.++ |.|+.++.||.++|++++|++.+.++++||. |++
T Consensus 141 vre~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~t 213 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DET 213 (481)
T ss_pred hhhhcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----Ccc
Confidence 45688999999987766543 469999999999999999 9999999999999999999999999999998 899
Q ss_pred EEEEeC------CC------------------------------C----eEEEEEecCCcceeEEEEeeCCCeE--EEeC
Q 000355 1297 VQKWEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1334 (1620)
Q Consensus 1297 VrLWdl------~t------------------------------g----~~l~~l~gH~~~V~sV~f~~~~~~l--aS~D 1334 (1620)
..||.. .. | .++..++||.+.|.++.|...++.+ +|+|
T Consensus 214 aHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 214 AHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred hHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc
Confidence 999972 11 0 2466789999999999999888877 7889
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.|..+||+++|+.+..+.+|.... +-+..+|..+++++++
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~EL----------------------------------------tHcstHptQrLVvTsS 333 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSEL----------------------------------------THCSTHPTQRLVVTSS 333 (481)
T ss_pred ccceeeeeccCceeccccCcchhc----------------------------------------cccccCCcceEEEEec
Confidence 999999999999999999886442 2233445678899999
Q ss_pred CCCcEEEEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEE
Q 000355 1415 GNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASW 1492 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l 1492 (1620)
.|.+.|+||.+.. ..+..|.||. ..|+++.|.. +..+++|++|.+|++||+++- .++.++
T Consensus 334 rDtTFRLWDFReaI~sV~VFQGHt------dtVTS~vF~~------------dd~vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 334 RDTTFRLWDFREAIQSVAVFQGHT------DTVTSVVFNT------------DDRVVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred cCceeEeccchhhcceeeeecccc------cceeEEEEec------------CCceeecCCCceEEEeeeccccCcceee
Confidence 9999999999843 3456677654 4578888753 246999999999999999974 578888
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC--CeEeecCCCCEEE--Eeec--CCEEEEEeCCc-eEEEe
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ--PTVFKGHTNGISG--FSVW--GQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~--~~~l~gH~~~V~a--fSpd--g~~LaSgs~D~-I~vwd 1564 (1620)
+ -+.+++.++ +..+..++.--.+..|++||+...+... ...-.||...|.| |.-+ -.-|++++.|+ +.=|+
T Consensus 396 R-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 396 R-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred e-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 7 578899999 7667788888888899999997653221 2255789999986 4433 24578889998 98898
Q ss_pred cc
Q 000355 1565 LS 1566 (1620)
Q Consensus 1565 l~ 1566 (1620)
+.
T Consensus 475 in 476 (481)
T KOG0300|consen 475 IN 476 (481)
T ss_pred ec
Confidence 75
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=252.32 Aligned_cols=139 Identities=24% Similarity=0.300 Sum_probs=121.0
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||++.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++++.+..++
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~~ 66 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL--------TERNILSRINHPFIVKLHYAFQTEE 66 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH--------HHHHHHHHcCCCcHHHHHHHeecCC
Confidence 699999999999862 3578999999877544332 222333 8999999999999999999999999
Q ss_pred EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++.
T Consensus 67 ~~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~ 141 (250)
T cd05123 67 KLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAK 141 (250)
T ss_pred eeEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCcce
Confidence 9999999996 699999983 44689999999999999999999999999999999999999998 89999999987
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=254.93 Aligned_cols=129 Identities=16% Similarity=0.027 Sum_probs=110.7
Q ss_pred eeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCEEEE
Q 000355 115 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 194 (1620)
Q Consensus 115 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~~~l 194 (1620)
|.||.||+|++. .+++.+|+|.+...... . +|...+....||||+++++++...+..++
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~-------~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEY-------S--------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhh-------h--------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 889999999972 46788999998763211 1 44444555679999999999999999999
Q ss_pred EEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 195 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 195 V~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
||||++| +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|++|||.+.
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~ 133 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWS 133 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchh
Confidence 9999995 99999873 44589999999999999999999999999999999999999998 89999999876
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=276.08 Aligned_cols=203 Identities=17% Similarity=0.124 Sum_probs=159.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|+.... ....++..||||+++.... ......+. +|+++|..+ +||||++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGL-FKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEecc-ccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 34799999999999999999974211 1124567899999875432 22223344 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+..++|||||+ |+|.++++...
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 9999999999999999999 59999986421
Q ss_pred ------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 212 ------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 212 ------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 12467778889999999999999999999999999999999888 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+......... ......++..|||||++.+..++.++|+|+.|++. |+++.
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l-~ellt 311 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFS 311 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH-HHHHh
Confidence 8543211110 01122345679999999999999999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=271.40 Aligned_cols=189 Identities=17% Similarity=0.063 Sum_probs=129.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHh------cCCCcH
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRL------IGVPSF 165 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~------~~~~~~ 165 (1620)
..++|++.++||+|+||+||+|...-.. .....++.||||++..... ....++++. .....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4679999999999999999999741110 0123467899999865322 112222210 111234
Q ss_pred hHHHhhccCCccc-----ccceeeEEEe--------CCEEEEEEeCCC-CCHHHHHhhCCC-------------------
Q 000355 166 DESSVPGCLRHPN-----VAPVLGLLKT--------SGLITSVIPKTP-YTLENILQFSPN------------------- 212 (1620)
Q Consensus 166 ~Ei~iL~~l~HpN-----Iv~l~~~~~~--------~~~~~lV~E~~~-g~L~~~l~~~~~------------------- 212 (1620)
.|+.++.+++|.+ +++++++|.. .+..+|||||++ ++|.++++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 6777888787654 4677777653 356899999999 499998863211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceec
Q 000355 213 ---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 289 (1620)
Q Consensus 213 ---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~ 289 (1620)
..++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ... .
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~------~ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNP------L 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCc------c
Confidence 1234556788999999999999999999999999999999998 899999999974321100 000 0
Q ss_pred ccccCccchhhhccc
Q 000355 290 GCSSQGLYADLKLSQ 304 (1620)
Q Consensus 290 ~~~gt~~Y~APEv~~ 304 (1620)
...+|+.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 111367899998764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-26 Score=267.19 Aligned_cols=196 Identities=15% Similarity=0.199 Sum_probs=161.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC---cc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 177 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~---Hp 177 (1620)
....+|..++.+|+|+||.|++|.++ ++..+|+||.|.+.+.-..--.+-. .+| +.--||+||..|+ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDr-kLG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDR-KLG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhccc-ccC-ccchhHHHHHHhhhcCcc
Confidence 34568999999999999999999973 3468899999988655432211111 112 2237999999997 99
Q ss_pred cccceeeEEEeCCEEEEEEeCCC-C-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~-g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
||++++++|++++++||+||--. | ||+++|.+ +..++|.+++.|++|++.|+++||+.||||||||-||+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999876 6 99999994 56789999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccc-ccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGELS 321 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y-~~~~d~W~~G~is 321 (1620)
-+||+|||.|...+.. + .....||..|.|||++.+..| +..-|+|..|.+.
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgill 759 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL 759 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence 7999999999853311 1 122458999999999999998 4588999999765
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=260.04 Aligned_cols=197 Identities=16% Similarity=0.186 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|+.+... ..+..+|+|.++... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~---~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 71 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPS---KRELPVAIHTLRAGC-SDKQRRGFL--------AEALTLGQFDHSNIVRL 71 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCC---CceeeEEEEecCCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 347999999999999999999863322 356889999987642 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++..++||||+++ +|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|+
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l 148 (266)
T cd05064 72 EGVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKI 148 (266)
T ss_pred EEEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEE
Confidence 9999999999999999995 999998742 45688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
+|||.+......... . .....++..|+|||++.+..++.++|+|+.|++. |++
T Consensus 149 ~dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el 201 (266)
T cd05064 149 SGFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM-WEV 201 (266)
T ss_pred CCCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHHH-HHH
Confidence 999987742211000 0 0011245679999999999999999999999775 443
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=234.95 Aligned_cols=277 Identities=15% Similarity=0.177 Sum_probs=228.2
Q ss_pred ccccccCCCceec--c---CCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF--P---TPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~---Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
..+..||+-.|-. | .|+|.+ |++++.|+.--+-+-+ |.-+.++.||.++|++.....|...-||++.
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa-- 79 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA-- 79 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc--
Confidence 4567789888864 4 466665 9999999988777766 7899999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce-EEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~-i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
|=+.+|||.-||..+.+|. |..-|.+|+|+.+..++ ++.++.+||+|++..+. ...+
T Consensus 80 --dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~----------------- 139 (334)
T KOG0278|consen 80 --DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI----------------- 139 (334)
T ss_pred --cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh-----------------
Confidence 8999999999999999987 99999999999998888 55599999999875432 1122
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
.+++++|..+-|.. ..+.+++++.|++||+||.++|..++++. +...|++
T Consensus 140 -------------~ghtg~Ir~v~wc~----------eD~~iLSSadd~tVRLWD~rTgt~v~sL~-------~~s~VtS 189 (334)
T KOG0278|consen 140 -------------SGHTGGIRTVLWCH----------EDKCILSSADDKTVRLWDHRTGTEVQSLE-------FNSPVTS 189 (334)
T ss_pred -------------cCCCCcceeEEEec----------cCceEEeeccCCceEEEEeccCcEEEEEe-------cCCCCcc
Confidence 23455666665543 36788888999999999999999999887 3445777
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~ 1527 (1620)
+-.+ ++|.+ ++-...+.|.+||..+..+++..+ -...|.+.. +|+...+++|+.|..++.||..++
T Consensus 190 lEvs-----------~dG~i-lTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg 256 (334)
T KOG0278|consen 190 LEVS-----------QDGRI-LTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG 256 (334)
T ss_pred eeec-----------cCCCE-EEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCC
Confidence 7664 34444 455566789999999999988877 356677777 899999999999999999999998
Q ss_pred CCCCCeEe-ecCCCCEEE--EeecCCEEEEEeCCc-eEEEecc
Q 000355 1528 WPSQPTVF-KGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1528 ~~~~~~~l-~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
..+..+ +||.++|.| |+|||...++||.|| |++|.+.
T Consensus 257 --eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 257 --EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred --ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 445554 999999997 999999999999999 9999975
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=283.47 Aligned_cols=199 Identities=15% Similarity=0.095 Sum_probs=150.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEE--------------ecCC-CCChhhHHHHHHhcCCCcHhH
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNL--------------LIEG-KASGQESKNFLRLIGVPSFDE 167 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~--------------i~~~-~~~~~~~~~~~~~~~~~~~~E 167 (1620)
.++|++++.||+|+||+||+|..... .+...++|. +.+. +........+. +|
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--------~E 213 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRAS-----TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLE--------NE 213 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEecc-----chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHH--------HH
Confidence 56899999999999999999875321 111122221 1110 01111112222 89
Q ss_pred HHhhccCCcccccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000355 168 SSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 244 (1620)
Q Consensus 168 i~iL~~l~HpNIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 244 (1620)
+.+|+.++|||||++++++...+..|+|||++.++|.+++.... ......+.++.|+.||+.||.|||++||+||||
T Consensus 214 i~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDL 293 (501)
T PHA03210 214 ILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDI 293 (501)
T ss_pred HHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 99999999999999999999999999999999999998876321 223456778899999999999999999999999
Q ss_pred CCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 245 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 245 KP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
||+|||++.++ .+||+|||+++........ ......||..|+|||++.+..|+.++|+|+.|++. |+
T Consensus 294 KP~NILl~~~~--~vkL~DFGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~e 360 (501)
T PHA03210 294 KLENIFLNCDG--KIVLGDFGTAMPFEKEREA----------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL-LD 360 (501)
T ss_pred CHHHEEECCCC--CEEEEeCCCceecCccccc----------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH-HH
Confidence 99999999999 8999999999854221100 01123478999999999999999999999999876 55
Q ss_pred HHh
Q 000355 325 YLL 327 (1620)
Q Consensus 325 yL~ 327 (1620)
++.
T Consensus 361 ll~ 363 (501)
T PHA03210 361 MLS 363 (501)
T ss_pred HHH
Confidence 553
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=247.40 Aligned_cols=279 Identities=21% Similarity=0.315 Sum_probs=222.4
Q ss_pred eeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1338 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~ 1338 (1620)
.+..|.||.+.|.|++=+|.. ..+||||. ||.|+|||+.+.+|..+++.|.+.|..|++.. +..+ ++.|++|+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~----DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSC----DGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVK 132 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhcccc----CceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCccee
Confidence 466789999999999999987 88999996 99999999999999999999999999999865 4444 66799999
Q ss_pred EEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
.|.+.- ..+.++.+.+ . +..+..+.-++.++||+. .
T Consensus 133 ~wk~~~-~p~~tilg~s-------------------------------~----------~~gIdh~~~~~~FaTcGe--~ 168 (433)
T KOG0268|consen 133 QWKIDG-PPLHTILGKS-------------------------------V----------YLGIDHHRKNSVFATCGE--Q 168 (433)
T ss_pred eeeccC-Ccceeeeccc-------------------------------c----------ccccccccccccccccCc--e
Confidence 999763 4555554321 0 122223333567787765 4
Q ss_pred EEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCc
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1498 (1620)
Q Consensus 1419 VrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~ 1498 (1620)
|.+||.....++..+.-.. ..+.++.|++... ..|++|.+|+.|.+||+|+++++..+. -...
T Consensus 169 i~IWD~~R~~Pv~smswG~------Dti~svkfNpvET----------sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mR 231 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWGA------DSISSVKFNPVET----------SILASCASDRSIVLYDLRQASPLKKVI-LTMR 231 (433)
T ss_pred eeecccccCCccceeecCC------CceeEEecCCCcc----------hheeeeccCCceEEEecccCCccceee-eecc
Confidence 8999998888887776432 3477888876544 588999999999999999999887765 3345
Q ss_pred EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCc
Q 000355 1499 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQ 1574 (1620)
Q Consensus 1499 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~ 1574 (1620)
-+.|+ .|++-.+++|++|..++.+|++.-. ..+....+|.+.|.+ |||.|+.++|||.|+ |++|....+-+
T Consensus 232 TN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S---- 306 (433)
T KOG0268|consen 232 TNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS---- 306 (433)
T ss_pred ccceecCccccceeeccccccceehhhhhhc-ccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc----
Confidence 56788 8888899999999999999999863 667788999999995 999999999999999 99999863211
Q ss_pred ceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1575 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1575 ~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
..++-. +....|.+|.|+.|.+++++||+||.||+|
T Consensus 307 -----RdiYht----kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW 342 (433)
T KOG0268|consen 307 -----RDIYHT----KRMQHVFCVKYSMDSKYIISGSDDGNVRLW 342 (433)
T ss_pred -----hhhhhH----hhhheeeEEEEeccccEEEecCCCcceeee
Confidence 122211 244679999999999999999999999999
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=257.37 Aligned_cols=194 Identities=22% Similarity=0.284 Sum_probs=161.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++++.||+|+||.||++.+. .+++.+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 889999999999999999972 4567899999987544333322333 79999999999999999999
Q ss_pred EEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+...+.+++||||+++ +|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .++|+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999997 9999998 456789999999999999999999999999999999999999988 8999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHHhhh
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
|.+...... ........++..|+|||++. +..++.++|+|+.|.+. |++++..
T Consensus 143 g~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~~~ 196 (260)
T PF00069_consen 143 GSSVKLSEN-----------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL-YELLTGK 196 (260)
T ss_dssp TTTEESTST-----------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH-HHHHHSS
T ss_pred ccccccccc-----------cccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 999742100 00122334688999999998 88899999999999775 5555533
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=243.66 Aligned_cols=276 Identities=18% Similarity=0.274 Sum_probs=224.7
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEE--------ecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY--------YGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l--------~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
|..+.+.|..|||||++|+|||. ||.|.+||..+|+..+.+ --|.++|.|++|+.+...+||+ ||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSv----DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSV----DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccc----cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCc
Confidence 55667899999999999999998 999999999999765443 3488999999999999998655 999
Q ss_pred EEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECC
Q 000355 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1416 (1620)
Q Consensus 1337 V~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~D 1416 (1620)
|++|.+.+|+|++.|... |+ ..|+|+.|+.|+..+++++.|
T Consensus 287 IKvWri~tG~ClRrFdrA-----------------------------Ht----------kGvt~l~FSrD~SqiLS~sfD 327 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFDRA-----------------------------HT----------KGVTCLSFSRDNSQILSASFD 327 (508)
T ss_pred EEEEEEecchHHHHhhhh-----------------------------hc----------cCeeEEEEccCcchhhccccc
Confidence 999999999999988631 11 237788888899999999999
Q ss_pred CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE--c
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--A 1494 (1620)
Q Consensus 1417 gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~--g 1494 (1620)
.++|+--+.+|++++.++||. +.|+.+.|. ++|..++++++||+|++|+..+++++.+++ +
T Consensus 328 ~tvRiHGlKSGK~LKEfrGHs------Syvn~a~ft-----------~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 328 QTVRIHGLKSGKCLKEFRGHS------SYVNEATFT-----------DDGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred ceEEEeccccchhHHHhcCcc------ccccceEEc-----------CCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 999999999999999999765 456666664 677899999999999999999999999998 4
Q ss_pred cCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCeEeec----CCCCEEE-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1495 HDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISG-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1495 H~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+.+|++|. .| +...++.|...++|.|-++.. +.+.++.. -.+-|.| +||.|.++...+.|+ ++.|.+.
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG---QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~ 467 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG---QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVL 467 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccc---eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEee
Confidence 567899998 44 456889999999999998864 22333322 1223554 999999999999999 8999875
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.|... .... -|...|-.++-+|...++|+=++||.+++|
T Consensus 468 -----sG~LE----~tl~-----VhEkdvIGl~HHPHqNllAsYsEDgllKLW 506 (508)
T KOG0275|consen 468 -----SGKLE----RTLP-----VHEKDVIGLTHHPHQNLLASYSEDGLLKLW 506 (508)
T ss_pred -----cCcee----eeee-----cccccccccccCcccchhhhhcccchhhhc
Confidence 22221 1111 266678899999999999999999999999
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=226.20 Aligned_cols=286 Identities=16% Similarity=0.156 Sum_probs=221.0
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeC-CCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~-~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
-+.||+-.+.. +..+|.+ |.|++.|.+..+|-. +|+.+.++.||+++|+|++.+.+.+.++|||. |.+
T Consensus 5 ~l~GHERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t 75 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQT 75 (327)
T ss_pred ccccCccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cce
Confidence 35577777765 7777776 999999999999986 59999999999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeC------CcEEEEeCCCCceEEEEeccCCccccccCCCCCcc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCD------GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~D------gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
++|||+++|+++.+++ -..+|..+.|+.++.++ ++.| +.|.++|++....-. ..
T Consensus 76 ~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~--~s---------------- 136 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDI--DS---------------- 136 (327)
T ss_pred eEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhh--cc----------------
Confidence 9999999999999998 67899999999998887 5544 568888887432100 00
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-eeCCCcccccCCccce
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-l~~~~~~v~~~~~V~s 1448 (1620)
..++..+-...+.++.+.|.|-++.|++|..||.|..||+++|+.+.. -+. |...|+.
T Consensus 137 ---------------~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind 195 (327)
T KOG0643|consen 137 ---------------EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKIND 195 (327)
T ss_pred ---------------cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh------hcccccc
Confidence 011111111223356666777899999999999999999999865432 232 4556888
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCc--EEEEECC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKT--LRIWDLR 1525 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~Dgt--I~IWDl~ 1525 (1620)
++++ ++..++++||.|.+.++||.++.++++++. -..+|++.+ +|....++.|+...- |.-=+.+
T Consensus 196 ~q~s-----------~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r 263 (327)
T KOG0643|consen 196 LQFS-----------RDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR 263 (327)
T ss_pred cccc-----------CCcceEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeeccc
Confidence 8876 566899999999999999999999999998 578999999 887666665553322 2222222
Q ss_pred CCCC----------CCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1526 RNWP----------SQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1526 ~~~~----------~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.++. ..+..++||=++|+ +|+|+|+..+||+.|| |++.-++
T Consensus 264 ~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 264 AGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred ccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 2321 34457789999999 4999999999999999 9988765
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=265.56 Aligned_cols=241 Identities=15% Similarity=0.258 Sum_probs=196.6
Q ss_pred cCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----------------------------------------
Q 000355 1223 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA----------------------------------------- 1259 (1620)
Q Consensus 1223 gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g----------------------------------------- 1259 (1620)
.|.+.||+ ||+||+| |||||.|+.|+||.+..
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 79999998 9999998 99999999999998533
Q ss_pred --------------------ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCccee
Q 000355 1260 --------------------SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1319 (1620)
Q Consensus 1260 --------------------~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~ 1319 (1620)
+.+..++||.+.|..+.||.++ +|+|+|+ |+|||||++...+|+++|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 0134677999999999999876 8999998 9999999999999999998 999999
Q ss_pred EEEEeeC-CCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCC
Q 000355 1320 DICVLSS-SGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1396 (1620)
Q Consensus 1320 sV~f~~~-~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1396 (1620)
||+|+|- ++++.|+ ||.||||++...+.+.-.+. ..
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-----------------------------------------~~ 452 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-----------------------------------------RD 452 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhh-----------------------------------------hh
Confidence 9999995 4556554 99999999987665433221 13
Q ss_pred ceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCc---ccccCCccceEeeeCCCccccCcccCCCCEEEEEe
Q 000355 1397 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT---ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1473 (1620)
Q Consensus 1397 ~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~---~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs 1473 (1620)
.||++++.|||+..+.|+.+|.+++|+....+....+..+.. ...+. .|+.+.|.+... .-|++.+
T Consensus 453 lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~----------~~vLVTS 521 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDP----------DEVLVTS 521 (712)
T ss_pred hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCC----------CeEEEec
Confidence 478889999999999999999999999987776655432211 11233 799999876443 4688889
Q ss_pred cCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1474 SSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1474 ~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
.|..|||||.++.+++..++|+...-..+. +.||+++++||+|..|++|+...
T Consensus 522 nDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 522 NDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 999999999999999999998755433333 67999999999999999999844
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=272.29 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=158.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
.++|++++.||+|+||.||+|++... +....+..||||++.... .......++ +|+++|+.+. ||||++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~-~~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGL-SRSQPVMKVAVKMLKPTA-RSSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEccc-CCCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 45899999999999999999986221 122345679999996532 222233444 8999999996 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+.+|||||||+ |+|.+++....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 9999999999999999999 59999886421
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 212 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 212 ---------------------------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
...+++..+..++.||+.||.|||+++|+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 12367778889999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++.......... .....++..|||||++.+..++.++|+|+.|++. |+++
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil-~ell 333 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYVS---------KGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL-WEIF 333 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceeccccccccc---------cCCcCCCcceEChhhhcCCCCCchhhHHHHHHHH-HHHH
Confidence 999999988 899999999984322111000 1111245679999999999999999999999776 5554
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=280.82 Aligned_cols=209 Identities=13% Similarity=0.094 Sum_probs=160.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
-++++.+.|.+|+|+.||+|++. ..+..+|+|++... ...+.+... +||++|+.|+ |+|||.+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L~~v~--------~EI~~MK~L~gh~nIV~y 100 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEALNAVK--------REIDIMKLLSGHKNIVSY 100 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHHHHHH--------HHHHHHHHhcCCCceeeE
Confidence 37888999999999999999972 23388999998763 333333333 9999999997 9999999
Q ss_pred eeE-EEeC------CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCceEec
Q 000355 183 LGL-LKTS------GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~-~~~~------~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 252 (1620)
+|. .... -.++|.||||. |.|-+++.......|+|.++..|++|+++|+.+||... |||||||-|||||+
T Consensus 101 idss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls 180 (738)
T KOG1989|consen 101 IDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS 180 (738)
T ss_pred eccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc
Confidence 993 2211 26889999999 59999998655566999999999999999999999987 99999999999999
Q ss_pred CCCceEEEEeecCCcccCCCCCcccCCCCCCcc--ceecccccCccchhhhcc---cccccccccccccccccchHHHHh
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG--CCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~--~~~~~~~gt~~Y~APEv~---~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.++ +.||||||.|.......+. ..+.. ...-...+|+.|+|||++ .+.+.+++.|+|..|||. |-.+-
T Consensus 181 ~~g--~~KLCDFGSatt~~~~~~~----~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL-YkLCy 253 (738)
T KOG1989|consen 181 ADG--NYKLCDFGSATTKILSPTS----AQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL-YKLCY 253 (738)
T ss_pred CCC--CEEeCcccccccccCCCcc----HHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH-HHHHH
Confidence 999 8999999999843222110 00000 001112368999999965 588999999999999997 44444
Q ss_pred hhhcccCC
Q 000355 328 FLNKLAGR 335 (1620)
Q Consensus 328 ~ln~~~gR 335 (1620)
+-.+|.+-
T Consensus 254 ~t~PFe~s 261 (738)
T KOG1989|consen 254 FTTPFEES 261 (738)
T ss_pred hCCCcCcC
Confidence 44455443
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=251.81 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=160.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.++.... ......+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKS-SSAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcc-hHHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5889999999999999999862 3578899999865432 22233333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+.+++.+|+||||++ ++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 9999999999999998 4999998754556689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
||+++....... ......+++.|+|||++.+..++.++|+|+.|.+. |+++..
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~-~~l~~g 196 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL-YELCTL 196 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchhh-eehhhc
Confidence 999874321110 11123467889999999999999999999999765 444433
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=262.94 Aligned_cols=241 Identities=23% Similarity=0.405 Sum_probs=192.8
Q ss_pred eeEEee-cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC--------------------------------C--
Q 000355 1261 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR--------------------------------I-- 1305 (1620)
Q Consensus 1261 ~l~tl~-gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t--------------------------------g-- 1305 (1620)
..+.+. +|.++|+++.||+||++|||||. |+.||||.+.. .
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345566 89999999999999999999998 99999998643 0
Q ss_pred --------------------------eEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCcc
Q 000355 1306 --------------------------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDS 1358 (1620)
Q Consensus 1306 --------------------------~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~ 1358 (1620)
+++..|.||.+.|.+|.|+.++-.| +|-|+|||+|++...+|+++|..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~H----- 408 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSH----- 408 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEec-----
Confidence 2355678999999999997766666 66699999999999999999873
Q ss_pred ccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEec-CCCEEEEEECCCcEEEEECCCCceeEEeeCCC
Q 000355 1359 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1437 (1620)
Q Consensus 1359 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~-dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~ 1437 (1620)
++.|||++|+| |.+++++|+-||.||||++...+.+.-..
T Consensus 409 ------------------------------------ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--- 449 (712)
T KOG0283|consen 409 ------------------------------------NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--- 449 (712)
T ss_pred ------------------------------------CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh---
Confidence 23466666666 78899999999999999998766554333
Q ss_pred cccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc--c------CCcEEEEE-eCC-C
Q 000355 1438 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--H------DGYVTKLA-APE-D 1507 (1620)
Q Consensus 1438 ~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g--H------~~~V~sva-spd-g 1507 (1620)
....|+++||. |+|+..+.|+-+|.+++|+++..+....+.- | ...|+.+. .|. .
T Consensus 450 ----l~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~ 514 (712)
T KOG0283|consen 450 ----LRDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP 514 (712)
T ss_pred ----hhhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC
Confidence 23569999986 7789999999999999999998887766531 1 12799988 432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC---CEEE-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1508 HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISG-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1508 ~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
..++..|.|..|+|+|.++. ..+..++|+.. .+.+ |+.||++|++|++|. |++|++.
T Consensus 515 ~~vLVTSnDSrIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 515 DEVLVTSNDSRIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred CeEEEecCCCceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence 35666778999999999876 45567777654 3554 999999999999999 9999973
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=268.30 Aligned_cols=216 Identities=16% Similarity=0.095 Sum_probs=166.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCC-CChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGK-ASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-.+.++||+|+||+||+|+-....+ .....||||..+... .......+++ +|.++|+.++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~--~~~~~VAvK~~k~~~~~~~~~~~e~m--------~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNG--FKVVPVAVKTTKGSSELTKEQIKEFM--------KEARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCC--ceeeeeEEEeecccccccHHHHHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 44556999999999999999643221 011228999987632 4455566666 999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
|+...+..++||||+|.| +|.++|+..++ .++..+...++.+.+.||+|||++++|||||-..|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999995 99999995433 588999999999999999999999999999999999999998 78999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh-hhhcccCCCCCCCc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL-FLNKLAGRRWGDYT 341 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~-~ln~~~gRs~~dl~ 341 (1620)
|||+++......... ..|.-...|+|||.+....|+.++|+|+.|.+. ||... .- .+|....
T Consensus 305 DFGLs~~~~~~~~~~-----------~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~-~Eif~~g~-----~Py~g~~ 367 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMKK-----------FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL-WEIFENGA-----EPYPGMK 367 (474)
T ss_pred ccccccCCcceeecc-----------ccccCcceecChhhhccCccccccchhheeeeE-EeeeccCC-----CCCCCCC
Confidence 999998543111111 112234569999999999999999999999665 33222 11 1344445
Q ss_pred CCcccceee
Q 000355 342 FHMVMPWVI 350 (1620)
Q Consensus 342 q~pv~pwv~ 350 (1620)
.+-+-.||.
T Consensus 368 ~~~v~~kI~ 376 (474)
T KOG0194|consen 368 NYEVKAKIV 376 (474)
T ss_pred HHHHHHHHH
Confidence 555666664
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=249.16 Aligned_cols=284 Identities=22% Similarity=0.226 Sum_probs=225.1
Q ss_pred ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcceeEEEEeeCCCeE--EEeCC
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1335 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~V~sV~f~~~~~~l--aS~Dg 1335 (1620)
.....+..|.+.|..+.|-++...|++||. |..|++|++..++ .+.++.|-.+.|+++.|.+++..+ +|.|+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~----Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~ 241 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGS----DRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDK 241 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcch----hhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCC
Confidence 355678889999999999999889999997 9999999987666 677888999999999999998887 45599
Q ss_pred cEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1336 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1336 tV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
++++|++...+...++.+|. +. |+++.+......+++|+.
T Consensus 242 ~~r~Wnvd~~r~~~TLsGHt------------------------------dk----------Vt~ak~~~~~~~vVsgs~ 281 (459)
T KOG0288|consen 242 NLRLWNVDSLRLRHTLSGHT------------------------------DK----------VTAAKFKLSHSRVVSGSA 281 (459)
T ss_pred ceeeeeccchhhhhhhcccc------------------------------cc----------eeeehhhccccceeeccc
Confidence 99999999999988888763 23 344444444555999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1495 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH 1495 (1620)
|.+|++||+..+.|.+++-. .+.++.|+.. +..+++|..|++||+||.+++.+......+
T Consensus 282 DRtiK~WDl~k~~C~kt~l~-------~S~cnDI~~~-------------~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g 341 (459)
T KOG0288|consen 282 DRTIKLWDLQKAYCSKTVLP-------GSQCNDIVCS-------------ISDVISGHFDKKVRFWDIRSADKTRSVPLG 341 (459)
T ss_pred cchhhhhhhhhhheeccccc-------cccccceEec-------------ceeeeecccccceEEEeccCCceeeEeecC
Confidence 99999999999888876542 2335555542 247899999999999999999999999876
Q ss_pred CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeec----CCCCEEEEeecCCEEEEEeCCc-eEEEeccCCC
Q 000355 1496 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISGFSVWGQDVISISNNK-IGLSSLSKSA 1569 (1620)
Q Consensus 1496 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~ 1569 (1620)
. .|+++. +.+|..+.|++.|.++.+.|+++......+.-.| |.-.-..|||++.++++||.|| |+||++.
T Consensus 342 g-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~--- 417 (459)
T KOG0288|consen 342 G-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF--- 417 (459)
T ss_pred c-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc---
Confidence 5 999999 9999999999999999999999864333222222 2211114999999999999999 9999986
Q ss_pred CCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1570 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1570 ~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.|.. .+..+ +.+....|++++|+|-|..|++++.++.+.+|-
T Consensus 418 --tgKl----E~~l~---~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 418 --TGKL----EKVLS---LSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred --CceE----EEEec---cCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 2222 11111 111223799999999999999999999999993
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-25 Score=265.52 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+.. .+...+++.||+|++.... .......+. +|+.+++++ +||||++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVN 75 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhh
Confidence 3589999999999999999987522 2223467899999986532 222333344 899999999 8999999
Q ss_pred eeeEEEeC-CEEEEEEeCCCC-CHHHHHhhCCC-----------------------------------------------
Q 000355 182 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPN----------------------------------------------- 212 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~----------------------------------------------- 212 (1620)
+++++... ..++++|||+++ +|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 99988654 578999999995 99999863211
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCC
Q 000355 213 ------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPT 280 (1620)
Q Consensus 213 ------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~ 280 (1620)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~--- 230 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV--- 230 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh---
Confidence 2568888999999999999999999999999999999999988 89999999998542211100
Q ss_pred CCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 281 SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 281 ~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
......++..|||||++.+..|+.+.|+|+.|++. |+++
T Consensus 231 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l-~el~ 269 (337)
T cd05054 231 ------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIF 269 (337)
T ss_pred ------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHH-HHHH
Confidence 01123456789999999999999999999999776 5554
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=253.41 Aligned_cols=324 Identities=19% Similarity=0.226 Sum_probs=235.7
Q ss_pred EEEEcCCCCEEEEeCC---Cc----eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC--eEEEEEec
Q 000355 1243 LGRVGGLKDESPWKIK---AS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYG 1313 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~---g~----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg--~~l~~l~g 1313 (1620)
|.|||.||.|++|++. +. ...+++.|.+.|+.++...+++.|+|||. |-||++|+...+ -|+.++..
T Consensus 40 LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~~~~~c~stir~ 115 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHKDNTFCMSTIRT 115 (735)
T ss_pred EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeecccCcchhHhhhhc
Confidence 9999999999999976 22 58889999999999999999999999998 899999999877 68899999
Q ss_pred CCcceeEEEE-eeCCCeEEEe--CCcEEEEeCCCCc--eEEEEeccCCccccccCCCCCcccccccccccccccCCCCCe
Q 000355 1314 HEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1388 (1620)
Q Consensus 1314 H~~~V~sV~f-~~~~~~laS~--DgtV~IWD~~tg~--~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1388 (1620)
|++.|.|+++ .++...+||+ |+.|.+||+++|. .+..+..-... ..++ +...+|
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~----sl~s-----------------G~k~si 174 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVN----SLGS-----------------GPKDSI 174 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccc----cCCC-----------------CCccce
Confidence 9999999998 5566666777 9999999999883 34333321100 0000 223344
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCE
Q 000355 1389 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1468 (1620)
Q Consensus 1389 ~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~ 1468 (1620)
.+.+ -++.|..+++|+..+.+++||.++++.+..++||... |+++-.. .+|..
T Consensus 175 YSLA----------~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdN------Vr~ll~~-----------dDGt~ 227 (735)
T KOG0308|consen 175 YSLA----------MNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDN------VRVLLVN-----------DDGTR 227 (735)
T ss_pred eeee----------cCCcceEEEecCcccceEEeccccccceeeeeccccc------eEEEEEc-----------CCCCe
Confidence 4444 4456889999999999999999999999999977654 7777654 67789
Q ss_pred EEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--E
Q 000355 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--F 1545 (1620)
Q Consensus 1469 LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--f 1545 (1620)
+++|++||+|++||+....++.++..|+..|+++. +|+-..+.+|+.||.|..=|+++.. +. ..+--...+|.. .
T Consensus 228 ~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~-~~-tlick~daPv~~l~~ 305 (735)
T KOG0308|consen 228 LLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA-KS-TLICKEDAPVLKLHL 305 (735)
T ss_pred EeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch-hh-eEeecCCCchhhhhh
Confidence 99999999999999999999999999999999999 8888999999999999999999852 11 111112233432 2
Q ss_pred eecCCEEEEEeCCc-eEEEeccCCCC--CCCcceeecc----ceeee----cCCCCccccEEEEEEecCCCEEEEEeCCC
Q 000355 1546 SVWGQDVISISNNK-IGLSSLSKSAD--EDGQHRLVPQ----KLYMV----DNGAKNLSVLSSISILPFSRLFLVGTEDG 1614 (1620)
Q Consensus 1546 Spdg~~LaSgs~D~-I~vwdl~~~~~--~~g~~~~~~~----kl~~~----~~g~~h~~~V~svafsPdg~lLasgs~DG 1614 (1620)
+-+.+-+=+++.|. |.-|....... ..|......+ ..... ..-....-.|...+.+.|.|.++|=...|
T Consensus 306 ~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~g 385 (735)
T KOG0308|consen 306 HEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKG 385 (735)
T ss_pred ccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCC
Confidence 21222223455566 88887653211 0111000000 00000 00000112466677788999999999999
Q ss_pred cEEEcC
Q 000355 1615 YLRLCC 1620 (1620)
Q Consensus 1615 ~IrlWd 1620 (1620)
.+.+||
T Consensus 386 nv~lwD 391 (735)
T KOG0308|consen 386 NVALWD 391 (735)
T ss_pred CEEEEE
Confidence 999997
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=257.65 Aligned_cols=203 Identities=15% Similarity=0.116 Sum_probs=161.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|...... .......+|+|.+.... .......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPN-ERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCC-CCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 457999999999999999999863221 12345789999987532 222233344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+..+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 999999999999999998 599999974211 45788889999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||++.++ .+||+|||+++......... ......+++.|||||.+.+..++.++|+|+.|++. |+++.
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il-~el~~ 221 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL-WEIFS 221 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHH-HHHHc
Confidence 99999998 89999999998432111000 01122356789999999888999999999999876 66654
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=255.72 Aligned_cols=202 Identities=16% Similarity=0.193 Sum_probs=159.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|...... ...+..+|+|.+... ........+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPG--MDHAQLVAIKTLKDI-NNPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCC--CCCcceEEEEeccCC-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 467899999999999999999853221 245788999998753 2223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
++++...+..|+||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 999999999999999998 59999985321 12467888899999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~ 220 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL-WEIF 220 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHHH-HHHH
Confidence 999999988 89999999998542211100 01112245679999999888899999999999776 5555
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
.
T Consensus 221 ~ 221 (283)
T cd05090 221 S 221 (283)
T ss_pred c
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=251.23 Aligned_cols=201 Identities=17% Similarity=0.190 Sum_probs=166.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc--cc--
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 178 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H--pN-- 178 (1620)
..+|++++.+|+|+||.|-+|.+.. .+..||||+++.-.. .++ .++-|+++|+++.+ |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~------~~~~vAlKIik~V~k----Yre-------Aa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRE------TKEHVALKIIKNVDK----YRE-------AALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecC------CCceehHHHHHHHHH----Hhh-------HHHHHHHHHHHHHhcCCCCc
Confidence 5699999999999999999999733 378999999865221 111 12379999999943 43
Q ss_pred --ccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC-
Q 000355 179 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC- 255 (1620)
Q Consensus 179 --Iv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~- 255 (1620)
+|++.++|...++.+||+|.++-+++++++.+....++..+++.+++||+.+++|||+.+++|-||||||||+.+..
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 88999999999999999999988999999977778899999999999999999999999999999999999985321
Q ss_pred -----------------ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 256 -----------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 256 -----------------~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
...+||+|||.|+...... ...++|..|+|||++.+.+|+..||+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------------STIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccCc--------------ceeeeccccCCchheeccCcCCccCceeee
Confidence 1268999999998543221 123478899999999999999999999999
Q ss_pred ccchHHHHhhhhcccCC
Q 000355 319 ELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gR 335 (1620)
||. +||.++.-.|.+-
T Consensus 297 CIL-~ElytG~~LFqtH 312 (415)
T KOG0671|consen 297 CIL-VELYTGETLFQTH 312 (415)
T ss_pred eEE-EEeeccceecccC
Confidence 998 7777776666543
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-25 Score=240.75 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=162.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+|+.||+++. ..++..+|+|++.-.. .++.+..+ +|++..++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 45899999999999999999884 4678899999986532 33444444 99999999999999999
Q ss_pred eeEEEeC-----CEEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCceEec
Q 000355 183 LGLLKTS-----GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~~~~~-----~~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 252 (1620)
+++...+ ...||+++|.. |+|.+.|... ++..++|.++..|+.+|++||++||+.. ++||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 9876543 35999999987 8999999853 3446899999999999999999999998 99999999999999
Q ss_pred CCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhh
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+++ .++|.|||.+......-.....+..-..+....| |..|+|||++. +...++++|+|+.||.. |.++-+.
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~C--t~pyRAPELf~vk~~~ti~ertDIWSLGCtL-Ya~mf~~ 238 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERC--TIPYRAPELFNVKSHCTITERTDIWSLGCTL-YAMMFGE 238 (302)
T ss_pred CCC--ceEEEeccCccccceEeechHHHHHHHHHHHHhC--CCcccCchheecccCcccccccchhhhhHHH-HHHHHcC
Confidence 988 8999999999854332221111111112333333 46799999887 44567899999999876 5555444
Q ss_pred hcc
Q 000355 330 NKL 332 (1620)
Q Consensus 330 n~~ 332 (1620)
++|
T Consensus 239 sPf 241 (302)
T KOG2345|consen 239 SPF 241 (302)
T ss_pred Ccc
Confidence 443
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=260.04 Aligned_cols=200 Identities=19% Similarity=0.159 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+.... ......||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEG--EKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCC--CccceeEEEEecccc-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 457999999999999999999852211 112345899998653 2223334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++... ..++|+||++ |+|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998765 5778999998 5999999842 34578888899999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|||||++.+..++.++|+|+.|.+. |+.++
T Consensus 151 ~DfG~a~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l-~el~t 206 (316)
T cd05108 151 TDFGLAKLLGADEKEYH---------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMT 206 (316)
T ss_pred ccccccccccCCCccee---------ccCCccceeecChHHhccCCCCchhhhHHHHHHH-HHHHc
Confidence 99999985432111100 0111235679999999999999999999999765 55443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=251.21 Aligned_cols=191 Identities=16% Similarity=0.197 Sum_probs=155.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++.. .++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-------RAQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-------ccCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 5688999999999999999875 33467999988654322 23344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+.+++||||++ |+|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 99999999999999998 5999998742 34578889999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++........ ......++..|+|||++.+..++.++|.|+.|.+. |+.+
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l-~el~ 195 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHH-HHHH
Confidence 99999843211100 01112245679999999988999999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=252.59 Aligned_cols=194 Identities=15% Similarity=0.147 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+++++||+|+||.||+|.. .++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-------NNSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-------cCCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999985 3456799999865322 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..++||||++ ++|.+++.......++...+..++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 999999999999999998 5999999865556688889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ ......++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~t 199 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-YEIVT 199 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHH-HHHHc
Confidence 999999853221100 00112245679999999888899999999999776 55443
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=253.53 Aligned_cols=203 Identities=15% Similarity=0.089 Sum_probs=158.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.-.. ....+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVV-KDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCC-CCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 467999999999999999998863211 12346789999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++...+..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++|++||||||+|||+++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 999999999999999999 59999997422 123466778889999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
++ .+||+|||+++.......... .....+++.|||||++.+..++..+|+|+.|++. |++++
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~ 216 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL-WEIAT 216 (277)
T ss_pred CC--CEEECCCCCccccCCcceeec---------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH-HHHHc
Confidence 98 899999999984322111000 0011246779999999988999999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-23 Score=256.88 Aligned_cols=246 Identities=11% Similarity=0.064 Sum_probs=183.9
Q ss_pred EEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccC-CCEEEEeccCCCCCcEEEEEeCCCCe--------EEEEEecC
Q 000355 1245 RVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYGH 1314 (1620)
Q Consensus 1245 sgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspd-g~~LaSgs~d~~~DgtVrLWdl~tg~--------~l~~l~gH 1314 (1620)
.||.++.+++|+.. ...+..+.||.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++..+.+|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeecC
Confidence 46678899999976 5678899999999999999997 789999997 9999999997642 45578899
Q ss_pred CcceeEEEEeeCCCeE-E--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEE
Q 000355 1315 EEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1391 (1620)
Q Consensus 1315 ~~~V~sV~f~~~~~~l-a--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv 1391 (1620)
...|.+|+|+|++..+ + +.|++|+|||+++++.+..+..+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~------------------------------------- 167 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP------------------------------------- 167 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC-------------------------------------
Confidence 9999999999988764 3 44999999999998866554311
Q ss_pred eecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEE
Q 000355 1392 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA 1471 (1620)
Q Consensus 1392 ~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~Las 1471 (1620)
..+.+++|+++|..+++++.|++|++||+++++.+.++.+|.+. +.+.++. .+++++++++|++
T Consensus 168 ----~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~------~~s~~v~------~~~fs~d~~~IlT 231 (568)
T PTZ00420 168 ----KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGG------KNTKNIW------IDGLGGDDNYILS 231 (568)
T ss_pred ----CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCC------ceeEEEE------eeeEcCCCCEEEE
Confidence 12667778888999999999999999999999999999877653 2222211 1223356678888
Q ss_pred EecCC----cEEEEECCC-CcEEEEEEc--cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE
Q 000355 1472 GLSSG----QCRLFDVRS-GNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1543 (1620)
Q Consensus 1472 Gs~Dg----~I~lwD~~t-g~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~ 1543 (1620)
++.|+ .|+|||+++ ++++..+.. +.+.+.... .++|.++++|+.|++|++|++..+....+..+. +..++.
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~ 310 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFR 310 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCcc
Confidence 77664 799999995 566666542 334444444 566889999999999999999876322222222 334444
Q ss_pred --EEeec
Q 000355 1544 --GFSVW 1548 (1620)
Q Consensus 1544 --afSpd 1548 (1620)
+|.|+
T Consensus 311 g~~f~Pk 317 (568)
T PTZ00420 311 SFGFLPK 317 (568)
T ss_pred ceEEccc
Confidence 46654
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=256.56 Aligned_cols=190 Identities=9% Similarity=-0.028 Sum_probs=155.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
..||+|++|.||+|.. +|+.||||.+.......... +.+. +|+.+|++++||||+++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~nIv~~~g~~~~ 89 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE--------NEIKNLRRIDSNNILKIYGFIID 89 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH--------HHHHHHHhcCCCCEEEEeeeEEe
Confidence 5799999999999984 57899999997654333222 2333 89999999999999999999977
Q ss_pred ----CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEEe
Q 000355 189 ----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 189 ----~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
...+++||||++| +|.+++. ....++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~ 165 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKII 165 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEc
Confidence 3478999999995 9999998 34567888889999999999999998 5999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc--cccccccccccccccchHHHHhhhhcccC
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~--~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
|||+++...... ....++..|+|||++.+ ..|+.++|+|+.|++. |+++++..+|.+
T Consensus 166 dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil-~el~~g~~Pf~~ 224 (283)
T PHA02988 166 CHGLEKILSSPP--------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL-WEIFTGKIPFEN 224 (283)
T ss_pred ccchHhhhcccc--------------ccccCcccccCHHHhhhccccccchhhhhHHHHHH-HHHHHCCCCCCC
Confidence 999998432110 01236788999999976 6899999999999776 777766555544
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=251.09 Aligned_cols=199 Identities=15% Similarity=0.117 Sum_probs=156.5
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|..... ...+..+|+|+++...........+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQD---DGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEecC---CCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 56789999999999999986221 12457899999876544444444555 89999999999999999998
Q ss_pred EEeCCE------EEEEEeCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 186 LKTSGL------ITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 186 ~~~~~~------~~lV~E~~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+...+. .++||||++ |+|..++... ....+++..+..++.|++.||.|||+++|+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 866553 799999999 5999888542 22467899999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il-~el~~ 210 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYRQ---------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM-WEIAT 210 (273)
T ss_pred C--eEEECCccceeeccccccccc---------cccccCCccccCHhhcccCCCCcccchHHHHHHH-HHHHh
Confidence 8 899999999985432111000 0011135679999999988999999999999876 66554
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-24 Score=230.42 Aligned_cols=287 Identities=17% Similarity=0.221 Sum_probs=221.3
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC------------C------eEEEEEecCCcceeEEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------I------NCVSGYYGHEEVVNDICV 1323 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t------------g------~~l~~l~gH~~~V~sV~f 1323 (1620)
...+..|.+++++.+|++||.++||||. |..|+|.|++. | -.++++..|.+.|+++.|
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsa----D~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F 180 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSA----DASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF 180 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCC----cceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee
Confidence 3457789999999999999999999998 89999999861 1 257888999999999999
Q ss_pred eeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEE
Q 000355 1324 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1401 (1620)
Q Consensus 1324 ~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1401 (1620)
+|....|+|+ |++|+++|...-...+.++.- . +...|.++
T Consensus 181 HPre~ILiS~srD~tvKlFDfsK~saKrA~K~~----------------------------q----------d~~~vrsi 222 (430)
T KOG0640|consen 181 HPRETILISGSRDNTVKLFDFSKTSAKRAFKVF----------------------------Q----------DTEPVRSI 222 (430)
T ss_pred cchhheEEeccCCCeEEEEecccHHHHHHHHHh----------------------------h----------ccceeeeE
Confidence 9999988554 999999998643322222110 0 11235666
Q ss_pred EEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEE
Q 000355 1402 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1481 (1620)
Q Consensus 1402 ~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lw 1481 (1620)
.++|.|.++++|..-.++|+||+.|.++.-.-.. .-.|...|++|.++ +.|++.++|+.||.|++|
T Consensus 223 SfHPsGefllvgTdHp~~rlYdv~T~QcfvsanP---d~qht~ai~~V~Ys-----------~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 223 SFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANP---DDQHTGAITQVRYS-----------STGSLYVTASKDGAIKLW 288 (430)
T ss_pred eecCCCceEEEecCCCceeEEeccceeEeeecCc---ccccccceeEEEec-----------CCccEEEEeccCCcEEee
Confidence 6777899999999999999999999887644321 12477778888876 566799999999999999
Q ss_pred ECCCCcEEEEEE-ccCCc-EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecC--CCCEE----E-EeecCCE
Q 000355 1482 DVRSGNVIASWR-AHDGY-VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH--TNGIS----G-FSVWGQD 1551 (1620)
Q Consensus 1482 D~~tg~~i~~l~-gH~~~-V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH--~~~V~----a-fSpdg~~ 1551 (1620)
|--+++++.++. +|.+. |.+.. ..||++++|.+.|.++++|.+.++ +.+.+..|- ++.+. + |+....+
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--R~l~~YtGAg~tgrq~~rtqAvFNhtEdy 366 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--RMLKEYTGAGTTGRQKHRTQAVFNHTEDY 366 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC--ceEEEEecCCcccchhhhhhhhhcCccce
Confidence 999999999986 77665 55544 889999999999999999999999 445555443 33222 2 7777777
Q ss_pred EEEEeCCc--eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1552 VISISNNK--IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~--I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
++.-.... +.-||.... .- ..++. -+|.+.++.+.-+|.+..|.+||+|-.+|+|
T Consensus 367 Vl~pDEas~slcsWdaRta-----dr----~~l~s----lgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 367 VLFPDEASNSLCSWDARTA-----DR----VALLS----LGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred EEccccccCceeeccccch-----hh----hhhcc----cCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 77765433 888996521 11 11222 2699999999999999999999999999999
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=253.54 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=160.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+||.||+|.+... ....++..+|+|.++... ..+....+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHL-EPENDKELVAVKTLKETA-SNDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccc-cCcCCcceEEEEeecccC-CHHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 45788999999999999999986221 112456889999986532 222334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
++++......++||||+++ +|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999984 9999997421 23477888999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|++.++ .+||+|||+++......... ......+++.|+|||++.+..++.++|+|+.|.+. |+++.
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~e~~~ 219 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL-WEIFT 219 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHHH-HHHHh
Confidence 999998 89999999997432111100 01112246789999999999999999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-25 Score=279.72 Aligned_cols=208 Identities=19% Similarity=0.197 Sum_probs=158.3
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+-..+|+.++.||+|+||.|||++++ -+|+.||||+|.... ......+.+ +|+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNK------lDGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNK------LDGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeec------ccchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 345678999999999999999999974 378999999998753 333334444 89999999999999
Q ss_pred cceeeEEEe-------------------------------------------------------C---------------
Q 000355 180 APVLGLLKT-------------------------------------------------------S--------------- 189 (1620)
Q Consensus 180 v~l~~~~~~-------------------------------------------------------~--------------- 189 (1620)
|++|..+.. .
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 998764310 0
Q ss_pred -------------------------------------------------CEEEEEEeCCCC-CHHHHHhhCCCCCC-CHH
Q 000355 190 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALK-SEW 218 (1620)
Q Consensus 190 -------------------------------------------------~~~~lV~E~~~g-~L~~~l~~~~~~~l-~~~ 218 (1620)
..+||-||||+- .|.+++++ +... ...
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d 697 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRD 697 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhH
Confidence 136889999996 66666663 2332 466
Q ss_pred HHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCC---CCCc-----ccCCCCCCccceecc
Q 000355 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNS---IADW-----CTIPTSPMIGCCIEG 290 (1620)
Q Consensus 219 ~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~---~~~~-----~~~~~~~~~~~~~~~ 290 (1620)
.++.+++||+.||.|+|++|||||||||.||++++++ .|||+|||+|.... .... ......... ...++
T Consensus 698 ~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~-~~~Ts 774 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSND-GDLTS 774 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCC-ccccc
Confidence 7788999999999999999999999999999999998 89999999999622 1100 000011111 12456
Q ss_pred cccCccchhhhcccccc---cccccccccccccchHHHHhh
Q 000355 291 CSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 291 ~~gt~~Y~APEv~~~~~---y~~~~d~W~~G~isnfeyL~~ 328 (1620)
-.||..|+|||++.+.. |+.++|+++.|.|. ||++.-
T Consensus 775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl-FEM~yP 814 (1351)
T KOG1035|consen 775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL-FEMLYP 814 (1351)
T ss_pred ccceeeeecHHHhcccccccccchhhhHHHHHHH-HHHhcc
Confidence 67899999999998665 99999999999887 887743
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=253.49 Aligned_cols=202 Identities=15% Similarity=0.129 Sum_probs=160.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.+.+.||+|+||.||++.+... ....++..+|+|.+... .......+. +|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~-~~~~~~~~~~ik~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNL-CPEQDKILVAVKTLKDA--SDNARKDFH--------REAELLTNLQHEHIVKF 72 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccC-CCCCcceEEEEEecCCc--CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35789999999999999999975221 11235677999998653 223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
++++...+.+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 73 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL 152 (288)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 999999999999999998 59999997421 134889999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 251 LTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 251 l~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
++.++ .+||+|||+++........ .....+.++..|+|||++.+..++.++|+|+.|++. |++++
T Consensus 153 i~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~~l~t 217 (288)
T cd05093 153 VGENL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL-WEIFT 217 (288)
T ss_pred EccCC--cEEeccCCccccccCCcee---------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH-HHHHh
Confidence 99998 8999999999843211100 011223356789999999998999999999999776 55544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=249.73 Aligned_cols=195 Identities=17% Similarity=0.178 Sum_probs=159.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+. ..+..+|+|.+.... ....++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQL 67 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhhe
Confidence 346889999999999999999862 356889999986432 2233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+++||||++ ++|.+++.......+++..++.++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl 145 (263)
T cd05052 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 145 (263)
T ss_pred EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEe
Confidence 999999999999999998 5999999755555688889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......+..|+|||.+.+..++..+|+|+.|++. |+.++
T Consensus 146 ~df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~t 200 (263)
T cd05052 146 ADFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIAT 200 (263)
T ss_pred CCCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHH-HHHHc
Confidence 9999998543211000 0011234579999999999999999999999776 55443
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=262.19 Aligned_cols=194 Identities=19% Similarity=0.212 Sum_probs=158.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999999872 4578999999865333333333343 8999999999999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
++++|... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 99998654 35799999999999998873 278999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
.+||+|||+++...... . .....+++.|+|||++.+..++.++|+|+.|++. |+++++
T Consensus 156 --~~kL~Dfg~~~~~~~~~----~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~~l~~g 213 (353)
T cd07850 156 --TLKILDFGLARTAGTSF----M--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMIRG 213 (353)
T ss_pred --CEEEccCccceeCCCCC----C--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH-HHHHHC
Confidence 89999999998432110 0 1112367889999999999999999999999775 444443
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-24 Score=249.86 Aligned_cols=195 Identities=16% Similarity=0.206 Sum_probs=156.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||+|.+.... ..+..+|+|.++... .......+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 71 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPG---KREIPVAIKTLKAGY-TEKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCC---CCceEEEEEECCCCC-CHHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 57899999999999999999863221 245689999986532 222233444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+++||||+++ +|.+++... ...++...+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l~ 148 (267)
T cd05066 72 GVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKVS 148 (267)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEeC
Confidence 999999999999999985 999999743 35678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+++.......... .. ..-.++..|+|||.+.+..++.++|.|+.|++.
T Consensus 149 dfg~~~~~~~~~~~~~--~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 149 DFGLSRVLEDDPEAAY--TT------RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred CCCcccccccccceee--ec------CCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 9999985432111000 00 001124579999999988999999999999775
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=254.00 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=161.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc----------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
..+|++++.||+|+||.||+|.+....+ ....+..+|+|.+..... ......+. +|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHH--------HHHHHHH
Confidence 4689999999999999999998643221 112456799999876422 23333444 8999999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 242 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 242 (1620)
.++||||+++++++..++..++||||++ ++|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999998 49999997432 1257899999999999999999999999999
Q ss_pred CCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccch
Q 000355 243 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 322 (1620)
Q Consensus 243 DLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isn 322 (1620)
||||+||+++.++ .+||+|||+++.......... .....+++.|||||.+.+..++.++|+|+.|++.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l- 222 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYRV---------QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL- 222 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCcceee---------cCcCCCCceecCHHHhhcCCCCccchhhhhHHHH-
Confidence 9999999999998 899999999984322111100 1122356789999999888899999999999765
Q ss_pred HHHHh
Q 000355 323 FEYLL 327 (1620)
Q Consensus 323 feyL~ 327 (1620)
|+.++
T Consensus 223 ~el~~ 227 (296)
T cd05051 223 WEILT 227 (296)
T ss_pred HHHHh
Confidence 55443
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=254.85 Aligned_cols=203 Identities=18% Similarity=0.147 Sum_probs=161.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||++.+.. ......+..+|+|.++.... ......+. +|+++++++ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4589999999999999999998521 11124567899999875422 22233344 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+.+++||||++ |+|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 9999999999999999998 5999999854444589999999999999999999999999999999999999888 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........ .......++..|+|||.+.+..++.++|+|+.|++. |+.++
T Consensus 182 l~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil-~el~t 238 (302)
T cd05055 182 ICDFGLARDIMNDSNY---------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFS 238 (302)
T ss_pred ECCCcccccccCCCce---------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH-HHHHh
Confidence 9999999843221110 011123356789999999988999999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-24 Score=251.73 Aligned_cols=202 Identities=17% Similarity=0.198 Sum_probs=159.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||++...... .......+|+|.+.... ..+...++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLD-NPNETSTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCC-CCCCceeEEEEEccCCC-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 357999999999999999999863221 12345789999987542 223333444 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+++||||++ |+|.+++... ....+++..+..++.||+.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 9999999999999999998 5999999631 235678889999999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++............ .-.++..|+|||++.+..++.++|+|+.|+|. |+.+
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 228 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRKTT---------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIF 228 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceeccC---------CCCCCccccCHHHhccCCcCcccceeehhhHH-HHHh
Confidence 999999998 89999999998543211100000 01134579999999988999999999999876 5444
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=244.08 Aligned_cols=271 Identities=17% Similarity=0.231 Sum_probs=216.6
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.-|.+.|.. |-++... |+||+.|..|++|+..+. .+.+|.|-.++|++++|.+++++++++|. |+.
T Consensus 172 d~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~ 242 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKN 242 (459)
T ss_pred hccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCc
Confidence 346666654 5444333 999999999999998843 68899999999999999999999999996 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1374 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~ 1374 (1620)
+++|++...+...++.||++.|+++.|.-....+ +|.|.+||+||+..+.|.++.-..+.
T Consensus 243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~------------------ 304 (459)
T KOG0288|consen 243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQ------------------ 304 (459)
T ss_pred eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccccc------------------
Confidence 9999999999999999999999999997766656 56699999999999888766542211
Q ss_pred ccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCC
Q 000355 1375 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1454 (1620)
Q Consensus 1375 ~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1454 (1620)
+.++. . .+..+++|..|++||+||.+++.++.....+. .|+++..+
T Consensus 305 -------------cnDI~----------~--~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-------~vtSl~ls-- 350 (459)
T KOG0288|consen 305 -------------CNDIV----------C--SISDVISGHFDKKVRFWDIRSADKTRSVPLGG-------RVTSLDLS-- 350 (459)
T ss_pred -------------ccceE----------e--cceeeeecccccceEEEeccCCceeeEeecCc-------ceeeEeec--
Confidence 11111 1 14478899999999999999999988776532 47777764
Q ss_pred CccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc----CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1455 ~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
++|.-|.+++.|.++.+.|+++.+...++.+- ....+.+. +|++.|+++||.||.|+||++.+++
T Consensus 351 ---------~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK- 420 (459)
T KOG0288|consen 351 ---------MDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK- 420 (459)
T ss_pred ---------cCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce-
Confidence 56678888899999999999999888887622 12256666 9999999999999999999999984
Q ss_pred CCCeEeecCCC--CEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1530 SQPTVFKGHTN--GISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1530 ~~~~~l~gH~~--~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
....+...+. .|++ |+|.|..|++++.++ +.+|.
T Consensus 421 -lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 421 -LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred -EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 4444544433 4775 888899999999999 99984
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=252.05 Aligned_cols=195 Identities=22% Similarity=0.259 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+++++.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTEE-GVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCcC-CCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 468999999999999999999862 35688999998654221 1112233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..|+||||++++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 9999999999999999999988887642 34578888999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHHHh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++........ .....+++.|+|||++.+ ..++..+|+|+.|.+. |++++
T Consensus 146 Dfg~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~~l~~ 199 (291)
T cd07870 146 DFGLARAKSIPSQT-----------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF-IEMLQ 199 (291)
T ss_pred ccccccccCCCCCC-----------CCCccccccccCCceeecCCCCCcHHHHHHHHHHH-HHHHh
Confidence 99999843211100 011125778999998865 4578899999999665 44443
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=248.67 Aligned_cols=194 Identities=19% Similarity=0.149 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.++..... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~v~iK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLW-------NNTTPVAVKTLKPGTMD---PKDFL--------AEAQIMKKLRHPKLIQL 66 (261)
T ss_pred hhheeeEEEecccCCccEEEEEe-------cCCeEEEEEeeCCCccc---HHHHH--------HHHHHHHHCCCCCccce
Confidence 35799999999999999999885 33567999998754322 23444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+++||||++ ++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l 144 (261)
T cd05068 67 YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKV 144 (261)
T ss_pred eEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEE
Confidence 999999999999999996 6999999854445688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ .. .....+..|+|||.+.+..++..+|+|+.|.+. |+.++
T Consensus 145 ~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t 199 (261)
T cd05068 145 ADFGLARVIKEDIYE-----AR-----EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL-TEIVT 199 (261)
T ss_pred CCcceEEEccCCccc-----cc-----CCCcCceeccCccccccCCCCchhhHHHHHHHH-HHHHh
Confidence 999999854311100 00 011123569999999988999999999999776 44443
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=254.91 Aligned_cols=203 Identities=15% Similarity=0.157 Sum_probs=158.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+... .....+..+|+|.+.... .......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGT-APGEQTQAVAIKTLKDKA-EGPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecC-CCCCceeEEEEEEccCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 34688899999999999999986321 112456889999987532 222222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++.+.+..++++||++ ++|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 999999999999999998 4999998521 1234778888999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++..+|+|+.|++. |++++
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~~ 221 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYYK---------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL-WEVFS 221 (283)
T ss_pred heEecCCC--ceEecccccccccccchhee---------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHH-HHHHc
Confidence 99999988 89999999998543211110 01112246789999999888899999999999776 55553
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-26 Score=263.62 Aligned_cols=203 Identities=19% Similarity=0.243 Sum_probs=173.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+++++..||-|+||.|-+++.+- ....+|+|.+++.........+.+ +.|-+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~------~~~~fAlKilkK~hIVdtkQqeHv-------~sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNS------QKATFALKILKKKHIVDTKQQEHV-------FSERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecc------cchHHHHHHHhHhhccchhHHHHH-------HhHHHHHHhcCchHHHHH
Confidence 4578889999999999999987421 123589999988777666555555 389999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|-.|.++.++|++||-|- |+|..+++ ..+.+.+..+++|+..++.|++|||++|||.|||||+|+|++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 999999999999999876 59999998 678899999999999999999999999999999999999999999 7999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
.|||+|+......++ -++| |||.|.|||++.+...+.++|.|+.|.+. ||.|++-.+|+|-
T Consensus 562 VDFGFAKki~~g~KT-----------wTFc-GTpEYVAPEIILnKGHD~avDyWaLGIli-~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRKT-----------WTFC-GTPEYVAPEIILNKGHDRAVDYWALGILI-YELLTGSPPFSGV 622 (732)
T ss_pred eehhhHHHhccCCce-----------eeec-CCcccccchhhhccCcchhhHHHHHHHHH-HHHHcCCCCCCCC
Confidence 999999964322211 1334 59999999999999999999999999554 8888888777764
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-24 Score=248.18 Aligned_cols=192 Identities=17% Similarity=0.165 Sum_probs=151.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|... ...++..+|+|+++..........++. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~ 67 (257)
T cd05116 1 GELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-A 67 (257)
T ss_pred CcCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-C
Confidence 36999999999998742 124578899999875433333334444 8999999999999999999875 4
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++. ....+++..+..++.|++.||.|||++||+||||||.|||++.++ .+||+|||+++
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~ 143 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSK 143 (257)
T ss_pred CCcEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCcccc
Confidence 56799999999 58999997 345688999999999999999999999999999999999999988 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
........... .....++..|+|||.+....++...|+|+.|++. |++++
T Consensus 144 ~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t 193 (257)
T cd05116 144 ALGADENYYKA--------KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM-WEAFS 193 (257)
T ss_pred ccCCCCCeeee--------cCCCCCCccccCHhHhccCCcCchhHHHHHHHHH-HHHHh
Confidence 53221110000 0111235689999999888899999999999776 66554
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=255.91 Aligned_cols=203 Identities=16% Similarity=0.167 Sum_probs=158.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccc-ccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|++.+.||+|+||.||+|+.... .....++..+|+|.+... ........+. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHH--------HHHHHHHhhccCCCch
Confidence 56899999999999999999974221 111234678999998653 2223333444 899999999 899999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++.....+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997421 2346777888999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++.......... ...-.++..|+|||++.+..|+.++|+|+.|.+. |++
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el 232 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYKK---------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM-WEI 232 (304)
T ss_pred cceEEEcCCC--cEEECCCccceeccccccccc---------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHH-HHH
Confidence 9999999988 899999999985432111000 0011135679999999988999999999999765 444
Q ss_pred H
Q 000355 326 L 326 (1620)
Q Consensus 326 L 326 (1620)
+
T Consensus 233 ~ 233 (304)
T cd05101 233 F 233 (304)
T ss_pred H
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=250.52 Aligned_cols=199 Identities=17% Similarity=0.142 Sum_probs=155.2
Q ss_pred CCe-eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y-~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++| ++++.||+|+||+||++.... ....++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDP--ANDGTGEMVAVKTLKREC-GQQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEcc--ccCCCCceEEEEEecccc-ChHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 455 889999999999999876422 123567889999987542 222233444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++... ..+++||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9988754 468999999995 99999873 3589999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++........... .....++..|+|||.+.+..++.++|+|+.|.+. |+.++
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l-~el~t 205 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRV--------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTL-YELLT 205 (283)
T ss_pred EEeecccccccCCcchhhcc--------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHH-HHHHh
Confidence 99999999854321110000 0112245679999999888899999999999665 44443
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-24 Score=247.68 Aligned_cols=196 Identities=15% Similarity=0.116 Sum_probs=155.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh---hhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~---~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+|++.+.||+|+||.||++.+. .++..||+|.+....... .....+. +|+.+++.++||||+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~ 67 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE--------CEIQLLKNLLHERIV 67 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH--------HHHHHHHhcCCCCee
Confidence 57899999999999999999862 457899999886432221 1122233 899999999999999
Q ss_pred ceeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 181 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 181 ~l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++++.+. ..+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~-- 143 (265)
T cd06652 68 QYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG-- 143 (265)
T ss_pred eEEeEeccCCCceEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--
Confidence 999998764 478899999985 99999873 35578889999999999999999999999999999999999998
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.+||+|||+++.......... . .....++..|+|||++.+..++.++|+|+.|++. |+.+
T Consensus 144 ~~~l~Dfg~~~~~~~~~~~~~-~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~ 203 (265)
T cd06652 144 NVKLGDFGASKRLQTICLSGT-G-------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV-VEML 203 (265)
T ss_pred CEEECcCcccccccccccccc-c-------cccCCCCccccChhhhcCCCCCcchhHHHHHHHH-HHHh
Confidence 899999999985322110000 0 1112367889999999888899999999999765 4444
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-24 Score=247.45 Aligned_cols=195 Identities=15% Similarity=0.163 Sum_probs=157.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|+.... ..+...+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLP---GKKEIDVAIKTLKAGS-SDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccC---CCCcceEEEEEcCCCC-ChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35789999999999999999986332 1345689999986532 223334454 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..++||||+++ +|.+++... .+.++...+..++.|++.||.|||+++|+||||||+|||+++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999985 999999743 34688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~---~------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l 198 (266)
T cd05033 148 SDFGLSRRLEDSEATY---T------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 198 (266)
T ss_pred Cccchhhcccccccce---e------ccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence 9999999543111100 0 0011235679999999988999999999999775
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-24 Score=248.09 Aligned_cols=195 Identities=19% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|++. .+++.+|||.+........ ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999999862 3578999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++...+..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999888642 234578999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|+|||+++........ .....+++.|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 146 ~l~d~g~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l-~el~ 200 (267)
T cd08228 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMA 200 (267)
T ss_pred EECccccceeccchhHH-----------HhcCCCCccccChhhhccCCCCchhhHHHHHHHH-HHHh
Confidence 99999998853211100 0112367789999999888899999999999665 4444
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=259.22 Aligned_cols=202 Identities=17% Similarity=0.154 Sum_probs=156.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+.- .....+++.||||.++.... ......+. +|+.+|..+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-HSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCCC-hHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4589999999999999999998521 12235678999999975432 22233344 899999999 6899999
Q ss_pred eeeEEEeC-CEEEEEEeCCC-CCHHHHHhhCC------------------------------------------------
Q 000355 182 VLGLLKTS-GLITSVIPKTP-YTLENILQFSP------------------------------------------------ 211 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------ 211 (1620)
+++++... ..+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 46899999999 59999986421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCC
Q 000355 212 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274 (1620)
Q Consensus 212 -----------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~ 274 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 12356677788999999999999999999999999999999988 89999999998532111
Q ss_pred cccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 275 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
... ......++..|+|||++.+..++.++|+|+.|.+. |+++
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 275 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIF 275 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHH-HHHH
Confidence 100 01123356679999999988999999999999775 4444
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=248.25 Aligned_cols=191 Identities=19% Similarity=0.228 Sum_probs=154.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||++.+ ..+..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~-------~~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKW-------RGKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEe-------cCCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 4688899999999999999985 23467899998653322 22344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+..|+||||++| +|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999985 999999743 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+.+
T Consensus 143 dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il-~~l~ 195 (256)
T cd05059 143 DFGLARYVLDDQYTS----------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred Ccccceecccccccc----------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHH-HHHh
Confidence 999998532111000 0011134469999999999999999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-24 Score=249.46 Aligned_cols=193 Identities=20% Similarity=0.121 Sum_probs=147.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||+||+|.... ......+|+|.+... ........++ +|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~G~fg~v~~~~~~~----~~~~~~~~~k~~~~~-~~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHR----GMSKARVVVKELRAS-ATPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEec----CCCCeEEEEeecCcc-CChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 469999999999987411 134567899987643 2233334444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 190 GLITSVIPKTP-YTLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+.+|+||||++ |+|.+++..... ...++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 99999999998 599999975322 2345677888999999999999999999999999999999998 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhccc-------ccccccccccccccccchHHHHh
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-------SMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-------~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+++.......... .....++..|+|||++. ...++.++|+|+.|++. |+++.
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~~ 204 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM-WELFT 204 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH-HHHHh
Confidence 9874221110000 01122456799999864 34567899999999776 55443
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=248.46 Aligned_cols=193 Identities=16% Similarity=0.135 Sum_probs=155.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.++||+|+||.||+|.+ .+...+|+|.+...... ..++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEe-------cCCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 45799999999999999999986 23346999998753332 22344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||+++|+||||||+||+++.++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999994 999999854445678889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||+..+..++..+|+|+.|++. |+.++
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~ellt 198 (262)
T cd05071 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTT 198 (262)
T ss_pred ccCCceeecccccccc----------ccCCcccceecCHhHhccCCCCchhhHHHHHHHH-HHHHc
Confidence 9999997432111000 1122356679999999888999999999999776 44443
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-24 Score=253.51 Aligned_cols=204 Identities=16% Similarity=0.146 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccc-cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|.+.+.||+|+||.||+|.+.... ....++..+|+|.+.... ......++. +|+++++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 368999999999999999999852211 111345689999987642 223333444 899999999 799999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++...+..|+||||++ |+|.+++.... ...++...+..++.|++.||+|||++||+|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999999999999998 59999997532 1347788899999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++......... .. ....++..|||||++.+..++.++|+|+.|++. |++
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~el 235 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK---KT------TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL-WEI 235 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh---cc------ccCCCccceeChHHhccCCCCcHHHHHHHHHHH-HHH
Confidence 9999999998 89999999998432111000 00 001134579999999988899999999999776 554
Q ss_pred Hh
Q 000355 326 LL 327 (1620)
Q Consensus 326 L~ 327 (1620)
++
T Consensus 236 ~~ 237 (307)
T cd05098 236 FT 237 (307)
T ss_pred Hc
Confidence 43
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-24 Score=250.03 Aligned_cols=202 Identities=14% Similarity=0.109 Sum_probs=159.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.+.+.||+|+||.||+|.+... ....++..+++|.+.... ....+.+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNL-SPTKDKMLVAVKALKDPT--LAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeecc-CCCCcceeeEEEecCCcc--HHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 34689999999999999999985221 112456778999986422 22223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+..++||||++ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 999999999999999998 59999997421 234788899999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||++.++ .+||+|||+++......... ....+.++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~t 220 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL-WEIFT 220 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCceee---------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHH-HHHHh
Confidence 99999998 89999999998432211100 01223356789999999999999999999999766 55444
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-24 Score=247.06 Aligned_cols=192 Identities=17% Similarity=0.178 Sum_probs=155.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.. ..+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEe-------cCCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 35799999999999999999875 23456999998754322 23344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+++||||+. ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 999999999999999998 5999999743 33688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 142 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~~l~ 195 (256)
T cd05113 142 SDFGLSRYVLDDEYTS----------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM-WEVY 195 (256)
T ss_pred CCCccceecCCCceee----------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHH-HHHh
Confidence 9999988532211000 0112245679999999888899999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=247.62 Aligned_cols=193 Identities=17% Similarity=0.151 Sum_probs=156.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+....... ..+. +|+.++++++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTW-------NGNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEe-------cCCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 46899999999999999999985 345679999987644332 2344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99875 4568999999985 999999854455688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ...+.++..|+|||++.+..++.++|.|+.|.+. |+++.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~ 198 (260)
T cd05070 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVT 198 (260)
T ss_pred CCceeeeeccCccccc----------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHH-HHHHh
Confidence 9999998432111000 0112234569999999888899999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-24 Score=248.25 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ....+..+|+|.+.... .......+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVV-KGEPETRVAIKTVNENA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccC-CCCcceeEEEEecCCcc-CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 468999999999999999999863211 12346789999986542 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++......++||||++ ++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 999999999999999998 59999997421 223577788899999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
++ .+||+|||+++......... .. ....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 215 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-KG--------GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL-WEMA 215 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-cC--------CCCCccccccCHHHHhcCCCCcccchHHHHHHH-HHhh
Confidence 99 89999999998432211100 00 111246679999999888899999999999776 5544
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=245.46 Aligned_cols=190 Identities=16% Similarity=0.121 Sum_probs=151.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|++. .+++.+|+|.+... ........+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRET-LPPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCcc-CCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 47999999999999862 45788999987643 2222333444 899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+.+++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999985 99999973 234578999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
......... .. ..-..+..|+|||.+.+..++.++|+|+.|+|. |+.++
T Consensus 143 ~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~e~~~ 191 (252)
T cd05084 143 EEEDGVYAS---TG------GMKQIPVKWTAPEALNYGRYSSESDVWSFGILL-WEAFS 191 (252)
T ss_pred ccccccccc---cC------CCCCCceeecCchhhcCCCCChHHHHHHHHHHH-HHHHh
Confidence 432110000 00 000123469999999988899999999999876 55443
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-22 Score=248.00 Aligned_cols=226 Identities=19% Similarity=0.225 Sum_probs=172.6
Q ss_pred EEEEcCCCCEEEEeCCCc-ee-------------EEeecccCcEEEEEEcc-CCCEEEEeccCCCCCcEEEEEeCCCC--
Q 000355 1243 LGRVGGLKDESPWKIKAS-IL-------------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1305 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~g~-~l-------------~tl~gH~~~V~svafsp-dg~~LaSgs~d~~~DgtVrLWdl~tg-- 1305 (1620)
+++++.+..+..|+..|. .+ ..+.||.+.|++++|+| ++++|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 677777777777876532 11 24789999999999999 8899999997 999999999765
Q ss_pred -----eEEEEEecCCcceeEEEEeeCC-CeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccc
Q 000355 1306 -----NCVSGYYGHEEVVNDICVLSSS-GRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1377 (1620)
Q Consensus 1306 -----~~l~~l~gH~~~V~sV~f~~~~-~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1377 (1620)
+++..+.+|...|.+|+|+|++ ..++ +.|++|+|||+.+++.+..+..|.
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~---------------------- 168 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHS---------------------- 168 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCC----------------------
Confidence 3577899999999999999976 4564 459999999999998877776442
Q ss_pred cccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCcc
Q 000355 1378 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1378 ~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1457 (1620)
..+.+++|+++|..+++|+.|++|++||+++++.+..+.+|... .+..+.|.
T Consensus 169 ------------------~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~-----~~~~~~w~----- 220 (493)
T PTZ00421 169 ------------------DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA-----KSQRCLWA----- 220 (493)
T ss_pred ------------------CceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC-----cceEEEEc-----
Confidence 23677778888999999999999999999999999888876542 12233343
Q ss_pred ccCcccCCCCEEEE-E---ecCCcEEEEECCCCc-EEEEEEccC-CcEEEEE-eCCCCEEEEEe-CCCcEEEEECCCCC
Q 000355 1458 QAGGAVASPSWIAA-G---LSSGQCRLFDVRSGN-VIASWRAHD-GYVTKLA-APEDHLLVSSS-LDKTLRIWDLRRNW 1528 (1620)
Q Consensus 1458 ~~~g~~p~g~~Las-G---s~Dg~I~lwD~~tg~-~i~~l~gH~-~~V~sva-spdg~~LaSgS-~DgtI~IWDl~~~~ 1528 (1620)
+++..+++ | +.|+.|++||+++.. ++.....+. ..+.... ++++++|++|+ .|++|++||+.++.
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 33345554 4 347999999999764 444444333 3344444 78999988887 59999999999873
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=248.88 Aligned_cols=193 Identities=13% Similarity=0.121 Sum_probs=159.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+ ..+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~-------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLW-------KNRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEe-------cCCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 45799999999999999999986 3368899999865322 1223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..++||||+++ +|.+++.......++...++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999985 999999865556789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l-~~l~ 198 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL-YEMF 198 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH-HHHH
Confidence 999999853211100 1122246679999999888999999999999765 4444
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=252.61 Aligned_cols=197 Identities=17% Similarity=0.163 Sum_probs=154.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+... .....+|+|.+... ........+. +|++++.++ +||||++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~----~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~iv~ 72 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIIN 72 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccC----CceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCcce
Confidence 46899999999999999999986221 11234677776542 2222333444 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+|+||||++ ++|.++++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp 152 (303)
T cd05088 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 152 (303)
T ss_pred EEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 9999999999999999998 59999997422 23578889999999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++...... .. .....+..|+|||++.+..++.+.|+|+.|++. |+.+
T Consensus 153 ~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ell 217 (303)
T cd05088 153 RNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIV 217 (303)
T ss_pred heEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhHH-HHHH
Confidence 999999998 89999999987321100 00 011134569999999888899999999999876 6655
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
+
T Consensus 218 t 218 (303)
T cd05088 218 S 218 (303)
T ss_pred h
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-24 Score=261.92 Aligned_cols=203 Identities=17% Similarity=0.144 Sum_probs=157.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
.++|.+.+.||+|+||.||+|++.-. .....+..||+|+++.... ......+. +|+++|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGL-SHSQSTMKVAVKMLKSTAR-SSEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCC-CCCCCceEEEEEecCCCCC-hhHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 45788999999999999999986321 1123467899999976422 22223344 8999999997 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN------------------------------------------------ 212 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~------------------------------------------------ 212 (1620)
+++++...+.+++||||++ |+|.++++....
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 9999999999999999999 599999974321
Q ss_pred ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000355 213 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 244 (1620)
Q Consensus 213 ------------------------------------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 244 (1620)
..++...+..|+.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 23566778889999999999999999999999
Q ss_pred CCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 245 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 245 KP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
||+|||++.++ .+||+|||+++.......... .....++..|||||.+.+..++.++|+|+.|.+. ||
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil-~e 333 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYIS---------KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL-WE 333 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceeccccccccc---------CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 99999999988 899999999984321111000 0111246789999999988899999999999765 55
Q ss_pred HHh
Q 000355 325 YLL 327 (1620)
Q Consensus 325 yL~ 327 (1620)
+++
T Consensus 334 ~l~ 336 (401)
T cd05107 334 IFT 336 (401)
T ss_pred HHH
Confidence 553
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=244.09 Aligned_cols=195 Identities=17% Similarity=0.183 Sum_probs=159.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..+++|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 468999999999999999999862 34678999998754222 223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|++|||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999995 99998874 235789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc---ccccccccccccccchHHHHhh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~---~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
+|||++........ ......++..|+|||++.+. .++.++|.|+.|++. |+++++
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l-~~~~tg 200 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA-IELAEL 200 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH-HHHHhC
Confidence 99999874321110 01122367789999998877 889999999999776 555543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=247.69 Aligned_cols=197 Identities=16% Similarity=0.145 Sum_probs=151.7
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
.+.+.||+|+||.||+|.+... .....+|+|.++...........+. +|+++++.++||||+++++++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~ 69 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQD----DSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGVC 69 (272)
T ss_pred ccccccCcccCceEEEeEEccC----CCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEE
Confidence 4678999999999999986221 1224689999876544444444555 899999999999999999987
Q ss_pred EeC------CEEEEEEeCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 187 KTS------GLITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 187 ~~~------~~~~lV~E~~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
... ...++||||++ |+|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 70 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 149 (272)
T cd05075 70 LQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM 149 (272)
T ss_pred ccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence 432 25789999998 5999888532 223478899999999999999999999999999999999999988
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.+||+|||+++........ .. .....+++.|+|||...+..++.++|+|+.|++. |++++
T Consensus 150 --~~kl~Dfg~~~~~~~~~~~------~~---~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il-~el~~ 209 (272)
T cd05075 150 --NVCVADFGLSKKIYNGDYY------RQ---GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM-WEIAT 209 (272)
T ss_pred --CEEECCCCcccccCcccce------ec---CCcccCCcccCCHHHccCCCcChHHHHHHHHHHH-HHHHc
Confidence 8999999999854221100 00 0111245679999999999999999999999776 54443
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-24 Score=245.69 Aligned_cols=194 Identities=17% Similarity=0.140 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~-------~~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTW-------NGTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEE-------cCCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 56899999999999999999885 34577999998764332 23344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++......++||||+++ +|.+++.......++...++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999998999999999985 999999854445789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......+..|+|||.+.+..++.++|+|+.|.+. |+.+.
T Consensus 145 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il-~~l~t 199 (261)
T cd05034 145 ADFGLARLIEDDEYTA----------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL-TEIVT 199 (261)
T ss_pred Cccccceeccchhhhh----------hhccCCCccccCHHHhccCCcCchhHHHHHHHHH-HHHHh
Confidence 9999998542110000 0011134579999999988899999999999775 55443
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=247.64 Aligned_cols=214 Identities=16% Similarity=0.201 Sum_probs=166.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHH-HHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK-NFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~-~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.++|-++..||+|+|++||+|-+ +...+.||+|+-..++.-..+.+ ++. ..++||..|.+.|+||-||+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFD------l~EqRYvAvKIHqlNK~WrdEKKeNYh----KHAcREyrIHKeLDHpRIVK 531 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFD------LTEQRYVAVKIHQLNKNWRDEKKENYH----KHACREYRIHKELDHPRIVK 531 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcc------cchhheeeEeeehhccchhhHhhhhHH----HHHHHHHhhhhccCcceeee
Confidence 35899999999999999999886 35678899998766655443333 233 24679999999999999999
Q ss_pred eeeEEEeC-CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCCCCceEecCC-Cc
Q 000355 182 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--LGIAHRSVCPSNVLLTDS-CW 256 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--~gIiHRDLKP~NILl~~~-~~ 256 (1620)
+|++|.-+ +.+|-|+|||+| ||.-+++ ..+.+++.+++.|+-||+.||.||.+ -.|||-||||.|||+... .+
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 99999754 579999999998 8888888 57789999999999999999999998 469999999999998543 23
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----ccccccccccccccccchHHHHhhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
+.+||+|||+++.+.+.......+..- .....||-+|.+||.+. ....+.++|+|+.|.|. |.+|-+..+|
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeL----TSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF-yQClYGrKPF 684 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMEL----TSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF-YQCLYGRKPF 684 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceee----ecccCceeeecCcceeecCCCCCccccceeeEeeehhh-hhhhccCCCC
Confidence 589999999999766544322211111 12234899999999654 23467799999999887 6666555554
Q ss_pred c
Q 000355 333 A 333 (1620)
Q Consensus 333 ~ 333 (1620)
+
T Consensus 685 G 685 (775)
T KOG1151|consen 685 G 685 (775)
T ss_pred C
Confidence 3
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.7e-23 Score=224.94 Aligned_cols=240 Identities=16% Similarity=0.220 Sum_probs=201.0
Q ss_pred cccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCC--EEEEeccCCCCCc
Q 000355 1219 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKG 1295 (1620)
Q Consensus 1219 ~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~--~LaSgs~d~~~Dg 1295 (1620)
-.+..|.+.+.++..+|.| +||||.|.+|+|||+. ...+..+-.|.+.|+++.|.++-. .|+||+. ||
T Consensus 37 F~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG 107 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DG 107 (362)
T ss_pred ccccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CC
Confidence 3466799999998888998 9999999999999998 667888889999999999999875 8999998 89
Q ss_pred EEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccc
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1296 tVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
.|.+|++...+++.++++|.+.|+.|+.+|.+... +++|+.++.||+-+|+.-..+.-.
T Consensus 108 ~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~------------------- 168 (362)
T KOG0294|consen 108 HIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK------------------- 168 (362)
T ss_pred cEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-------------------
Confidence 99999999999999999999999999999998876 667999999999998864444321
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
+.-+.+.|+|.|.+++.++.++ |-+|.+.+......+. .+..+.|+.|
T Consensus 169 ----------------------~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~-------~~~r~l~~~~-- 216 (362)
T KOG0294|consen 169 ----------------------NKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIE-------NPKRILCATF-- 216 (362)
T ss_pred ----------------------CcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhh-------ccccceeeee--
Confidence 0123466777899999888754 8899888766554433 2223444443
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRNW 1528 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~~ 1528 (1620)
-++..+++|.+|+.|++||..++.+...+.+|...|-++. .|++.+|+|+|.||.|++||++...
T Consensus 217 ----------l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 217 ----------LDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred ----------cCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 3557899999999999999999999999999999999998 6778899999999999999998763
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=244.93 Aligned_cols=202 Identities=15% Similarity=0.215 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|...... ..+..||+|.+... .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 70 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPG---KREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCC---CCceeEEEEEcCCC-CCHHHHHHHH--------HHHHHHHhCCCcCcceE
Confidence 346899999999999999999863321 23457999998653 2333344555 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++..++||||+++ +|.+++.. ..+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl 147 (269)
T cd05065 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (269)
T ss_pred EEEECCCCceEEEEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEE
Confidence 9999999999999999985 99999874 345678999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++........ ... .....+..+..|+|||.+.+..++.++|+|+.|++. |+++
T Consensus 148 ~dfg~~~~~~~~~~~-----~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~e~l 205 (269)
T cd05065 148 SDFGLSRFLEDDTSD-----PTY-TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-WEVM 205 (269)
T ss_pred CCCccccccccCccc-----ccc-ccccCCCcceeecCHhHhccCcccchhhhhhhHHHH-HHHh
Confidence 999998743221110 000 000111123569999999999999999999999776 5544
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=248.09 Aligned_cols=199 Identities=16% Similarity=0.091 Sum_probs=157.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
-|++++.||+|+||.||+|+.... ...++..+|+|.++... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccC--CCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 478899999999999999975321 12467899999986532 222233344 8999999999999999999
Q ss_pred EEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++... ...++||||++| +|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98875 578999999985 999999742 33578889999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++......... .......++..|+|||++.+..++.++|+|+.|.+. |+.+
T Consensus 151 ~dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~ell 206 (284)
T cd05079 151 GDFGLTKAIETDKEYY--------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL-YELL 206 (284)
T ss_pred CCCccccccccCccce--------eecCCCCCCccccCHHHhccCCCCccccchhhhhhh-hhhh
Confidence 9999998543211100 011223467789999999888899999999999776 5444
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=245.07 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=157.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 46899999999999999999985 45678999998764432 23444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+. ++|.+++.......++...+..++.|++.||+|||++||+||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 567899999998 5999999865556788999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ ......++..|+|||++....++..+|+|+.|.+. |+.++
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~el~~ 198 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL-TEIVT 198 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHHH-HHHHh
Confidence 999999743211100 01122245679999999988899999999999665 44443
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=247.50 Aligned_cols=201 Identities=16% Similarity=0.139 Sum_probs=156.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|...-. ...++..||+|.+... .......+. +|+++++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~~v~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 70 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPL--QDNTGEVVAVKKLQHS--TAEHLRDFE--------REIEILKSLQHDNIVKY 70 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCC--cCCCCcEEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCCeeEE
Confidence 34789999999999999999874211 1246789999998653 222333444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++... ..+++||||++ ++|.+++... ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~ 147 (284)
T cd05081 71 KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RV 147 (284)
T ss_pred EEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eE
Confidence 9987543 47899999998 5999999742 34578899999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++........... .....++..|+|||++.+..++.++|+|+.|.+. |+++.
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~ 206 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYKV--------REPGESPIFWYAPESLTESKFSVASDVWSFGVVL-YELFT 206 (284)
T ss_pred EECCCcccccccCCCcceee--------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH-HHHhh
Confidence 99999999854321110000 0011134469999999988999999999999765 55443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=249.48 Aligned_cols=195 Identities=18% Similarity=0.165 Sum_probs=152.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|..... .....+++|.++.. ........+. +|++++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKD----GLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCC----CCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 5789999999999999999986221 11234788887642 2222333444 899999999 79999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+.+|+||||++ ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 999999999999999998 59999997421 134788899999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||++.++ .+||+|||+++....... . .....+..|+|||++.+..++.++|+|+.|++. |+++
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~~------~------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il-~el~ 212 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYVK------K------TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL-WEIV 212 (297)
T ss_pred eEEECCCC--eEEECCcCCCccccceec------c------CCCCcCccccCchhhccCCCCchhhHHHHHHHH-HHHH
Confidence 99999988 899999999873211100 0 001123469999999988999999999999776 5544
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=216.65 Aligned_cols=275 Identities=13% Similarity=0.127 Sum_probs=217.3
Q ss_pred CCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEe
Q 000355 1225 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1301 (1620)
Q Consensus 1225 ~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWd 1301 (1620)
.+.|.+ |+.+|.. +++++.|.+++|||.. |..++++..+...|..++|......++.+|. ..|.+||.-+
T Consensus 14 ~~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEE
Confidence 345665 8888886 9999999999999987 9999999999999999999888777777775 4689999999
Q ss_pred CCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccc
Q 000355 1302 LTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1379 (1620)
Q Consensus 1302 l~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1379 (1620)
+.+.++++.|.||.+.|++++.+|-+..+ +|.|++|++||+++.+|...+.....
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~----------------------- 143 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR----------------------- 143 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC-----------------------
Confidence 99999999999999999999999988777 56699999999998888766643211
Q ss_pred cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC--ceeEEeeCCCcccccCCccceEeeeCCCcc
Q 000355 1380 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1380 ~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1457 (1620)
.+.++.|.|-.+|+|...+.|++||+|.- .+..++.-... -....+.+.|+
T Consensus 144 -------------------pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~---~~~ew~~l~FS----- 196 (311)
T KOG1446|consen 144 -------------------PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDN---DEAEWTDLEFS----- 196 (311)
T ss_pred -------------------cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCC---CccceeeeEEc-----
Confidence 23455667999999998889999999873 34444432211 12334556654
Q ss_pred ccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE----EEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1458 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV----TKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1458 ~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V----~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
++|++++.+...+.+++.|.-+|..+.++.++...- .+.-.||++++++|+.||+|.+|+++++ .++.
T Consensus 197 ------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg--~~v~ 268 (311)
T KOG1446|consen 197 ------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG--KKVA 268 (311)
T ss_pred ------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC--cEee
Confidence 778899999999999999999999999998775432 3333899999999999999999999998 6677
Q ss_pred Eeec-CCCCEEE--EeecCCEEEEEeCCceEEEec
Q 000355 1534 VFKG-HTNGISG--FSVWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1534 ~l~g-H~~~V~a--fSpdg~~LaSgs~D~I~vwdl 1565 (1620)
.+++ +..++.+ |+|.--+++|++.. +.+|-.
T Consensus 269 ~~~~~~~~~~~~~~fnP~~~mf~sa~s~-l~fw~p 302 (311)
T KOG1446|consen 269 VLRGPNGGPVSCVRFNPRYAMFVSASSN-LVFWLP 302 (311)
T ss_pred EecCCCCCCccccccCCceeeeeecCce-EEEEec
Confidence 8888 6778877 66655555554422 666753
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=247.65 Aligned_cols=200 Identities=15% Similarity=0.123 Sum_probs=153.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|...... ......+++|.+... .......++. .|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~--~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~iv~~ 74 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEG--DSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAYIVRL 74 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCC--CceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 458899999999999999999862211 011235788887532 2222223333 78889999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. ....++++||++ |+|.+++.. ....+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||
T Consensus 75 ~~~~~-~~~~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~--~~kl 150 (279)
T cd05111 75 LGICP-GASLQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS--IVQI 150 (279)
T ss_pred EEEEC-CCccEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEE
Confidence 99875 456788999998 699999974 245688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......++..|+|||.+.+..|+.+.|+|+.|.+. |+.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~el~t 206 (279)
T cd05111 151 ADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV-WEMMS 206 (279)
T ss_pred cCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH-HHHHc
Confidence 9999998432111100 01123356789999999988999999999999776 55543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=252.17 Aligned_cols=204 Identities=16% Similarity=0.174 Sum_probs=158.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc-ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG-CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|++.+.||+|+||.||+|++..... .......+|+|.+.... ......++. +|+++++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 4689999999999999999998522111 11345679999987532 233333444 899999999 699999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++...+.+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997422 2347888889999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++......... .. ....++..|||||++.+..++.++|+|+.|.+. |++
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l-~el 229 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK---KT------SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM-WEI 229 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc---cc------ccCCCCccccCHHHHccCCcCccchhhHHHHHH-HHH
Confidence 9999999998 89999999998442111000 00 001134579999999988999999999999776 555
Q ss_pred Hh
Q 000355 326 LL 327 (1620)
Q Consensus 326 L~ 327 (1620)
+.
T Consensus 230 ~~ 231 (314)
T cd05099 230 FT 231 (314)
T ss_pred Hh
Confidence 53
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=247.33 Aligned_cols=200 Identities=19% Similarity=0.183 Sum_probs=154.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++..... .....||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~--~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGE--NVKIPVAIKVLRENT-SPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCC--ccceEEEEEEecCCC-CHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4689999999999999999998522110 112358999986532 222233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...+++|||++ |+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 45789999998 599999974 245689999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|||||...+..++.++|+|+.|++. |+.++
T Consensus 151 ~dfG~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~t 206 (279)
T cd05109 151 TDFGLARLLDIDETEYH---------ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV-WELMT 206 (279)
T ss_pred CCCCceeecccccceee---------cCCCccchhhCCHHHhccCCCCchhHHHHHHHHH-HHHHc
Confidence 99999985432111000 0111235679999999988999999999999765 55443
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=249.62 Aligned_cols=203 Identities=18% Similarity=0.160 Sum_probs=157.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhcc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC 173 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~ 173 (1620)
++|++.+.||+|+||.||++.+.-.. ....+...+|+|.+.... ......++. +|+++|+.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~--------~E~~~l~~ 75 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFL--------KEIKIMSR 75 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHh
Confidence 57999999999999999998642110 111245679999987532 222334444 89999999
Q ss_pred CCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000355 174 LRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 243 (1620)
Q Consensus 174 l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 243 (1620)
++||||+++++++...+..++||||++ ++|.+++..... ..++...+..++.||+.||+|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 999999999999999999999999998 599999874221 2366778999999999999999999999999
Q ss_pred CCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchH
Q 000355 244 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 244 LKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnf 323 (1620)
|||+|||++.++ .+||+|||+++........ . ......++..|+|||...+..++.++|+|+.|++. |
T Consensus 156 lkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~------~---~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l-~ 223 (296)
T cd05095 156 LATRNCLVGKNY--TIKIADFGMSRNLYSGDYY------R---IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL-W 223 (296)
T ss_pred CChheEEEcCCC--CEEeccCcccccccCCcce------e---ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH-H
Confidence 999999999988 8999999999843211100 0 01112235679999988888899999999999776 6
Q ss_pred HHHh
Q 000355 324 EYLL 327 (1620)
Q Consensus 324 eyL~ 327 (1620)
++++
T Consensus 224 el~~ 227 (296)
T cd05095 224 EILT 227 (296)
T ss_pred HHHH
Confidence 6554
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-25 Score=262.60 Aligned_cols=190 Identities=14% Similarity=0.152 Sum_probs=155.4
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
...||+|+|-+||+|-| ..+|..||.-.++..+... .....+. .|+++|+.|+|||||++|+++
T Consensus 45 ~evLGrGafKtVYka~D------e~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~SW 110 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFD------EEEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYDSW 110 (632)
T ss_pred hhhcccccceeeeeccc------cccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeeehe
Confidence 57999999999999997 2567778765554332222 2223444 899999999999999999999
Q ss_pred EeCCE--EEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCceEecCCCceEEEE
Q 000355 187 KTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 187 ~~~~~--~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+..+ +.+|+|.+. |+|..+++ +.+..+...++.|++||++||.|||++ .|||||||.+||+|+.+. +.|||
T Consensus 111 ~d~~n~~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~VKI 187 (632)
T KOG0584|consen 111 VDTDNKTINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEVKI 187 (632)
T ss_pred ecCCCceeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Cceee
Confidence 87764 889999998 79999999 466778889999999999999999996 699999999999999875 49999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|.|||+.... .+...|.|||.|||||+.. ..|+..+|+++.| ++.|++..+.-
T Consensus 188 GDLGLAtl~r~-------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFG-------MCmLEMvT~eY 241 (632)
T KOG0584|consen 188 GDLGLATLLRK-------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFG-------MCMLEMVTSEY 241 (632)
T ss_pred cchhHHHHhhc-------------cccceeccCccccChHHHh-hhcchhhhhhhhh-------HHHHHHHhccC
Confidence 99999984321 1223477999999999998 7899999999999 66667766643
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=243.33 Aligned_cols=196 Identities=20% Similarity=0.188 Sum_probs=160.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.++........ ...+. +|+++++.++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 57999999999999999999862 36788999998753333322 33344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++..++||||+++ +|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999995 999998642 235578999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++....... .. ..-.+++.|+|||.+.+..++.++|+|+.|.+. |+.+.
T Consensus 146 ~l~d~~~~~~~~~~~~---~~--------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~~l~~ 201 (267)
T cd08224 146 KLGDLGLGRFFSSKTT---AA--------HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAA 201 (267)
T ss_pred EEeccceeeeccCCCc---cc--------ceecCCccccCHHHhccCCCCchhcHHHHHHHH-HHHHH
Confidence 9999999874321100 00 111257789999999998999999999999776 55544
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-24 Score=246.32 Aligned_cols=201 Identities=19% Similarity=0.162 Sum_probs=161.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .++..+|||.+........ ...++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57889999999999999999862 4578899998865333222 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999988732 235678999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
||+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+. |+++....++
T Consensus 146 ~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~ 206 (267)
T cd08229 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPF 206 (267)
T ss_pred EECcchhhhccccCCcc-----------cccccCCcCccCHHHhcCCCccchhhHHHHHHHH-HHHHhCCCCc
Confidence 99999998743211100 0111267789999999988899999999999776 5555544433
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=248.59 Aligned_cols=201 Identities=17% Similarity=0.183 Sum_probs=156.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+....+ ......+|+|.+.... ......++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKG-RAGYTTVAVKMLKENA-SSSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCC-CCcceeEEEEecCCCC-CHHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 47889999999999999998632211 2334678898886532 223333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 241 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 241 (1620)
.+..++..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++||+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 9999999999999999 59999986421 134678888999999999999999999999
Q ss_pred cCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 242 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 242 RDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++..+|+|+.|.+.
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 219 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 219 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHH
Confidence 99999999999988 899999999984322111000 0112245679999999888899999999999765
Q ss_pred hHHHHh
Q 000355 322 NFEYLL 327 (1620)
Q Consensus 322 nfeyL~ 327 (1620)
|++++
T Consensus 220 -~el~t 224 (290)
T cd05045 220 -WEIVT 224 (290)
T ss_pred -HHHHh
Confidence 55443
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=243.71 Aligned_cols=190 Identities=15% Similarity=0.156 Sum_probs=148.1
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
.||+|+||.||+|.... ...+..+|+|.+.... .......+. +|+.+++.++||||+++++++. .+
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNEN-EKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEccccc-ChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999987522 1345679999986542 222233344 8999999999999999999886 45
Q ss_pred EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCccc
Q 000355 191 LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 191 ~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~ 269 (1620)
..++||||++ ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 7899999998 499999873 345689999999999999999999999999999999999999988 899999999984
Q ss_pred CCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 270 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
........ .. .....++..|+|||.+....++.++|+|+.|++. |+++
T Consensus 145 ~~~~~~~~---~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 192 (257)
T cd05115 145 LGADDSYY---KA-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM-WEAF 192 (257)
T ss_pred ccCCccce---ec-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH-HHHh
Confidence 32111100 00 0111135679999999888899999999999776 4444
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-24 Score=267.62 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=159.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+-+..+.||+|+||+||+|+- .......+...||||.++.. ...+...+|. ||+++|..|+|||||+|+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~-~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEA-YGLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRLLG 556 (774)
T ss_pred heeehhhhcCchhhhhhhhhc-cCCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEEEE
Confidence 566789999999999999884 21111245688999999764 4444566777 9999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
++..++.+|+|+|||. |||.++|+... ...++..+...|+.||+.|+.||-++.+|||||-..|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 9999999999999999 79999998521 1237888999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 252 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
.++. .|||+|||++|..-..+-........ =...||+||-+....|+..+|+|+.|.+.
T Consensus 637 ge~l--~VKIsDfGLsRdiYssDYYk~~~~t~---------lPIRWMppEsIly~kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 637 GENL--VVKISDFGLSRDIYSSDYYKVRGNTL---------LPIRWMPPESILYGKFTTESDVWSFGVVL 695 (774)
T ss_pred ccce--EEEecccccchhhhhhhhhcccCCce---------eeeecCCHHHhhcCcccchhhhhhhhhhh
Confidence 9999 99999999999432221111111111 13459999999999999999999999764
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=243.34 Aligned_cols=197 Identities=15% Similarity=0.116 Sum_probs=156.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCC---hhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+...... .+....+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 47899999999999999999862 45789999987543211 12223333 899999999999999
Q ss_pred ceeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 181 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 181 ~l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++++.+. ..+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998764 468999999985 9999987 345578999999999999999999999999999999999999988
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.+||+|||+++.......... ......++..|+|||++.+..++.++|+|+.|++. |+.++
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~ 204 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSGT--------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV-VEMLT 204 (264)
T ss_pred CEEECccccccccccccccCc--------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH-HHHHh
Confidence 899999999985432110000 01112367889999999988899999999999766 44443
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=247.08 Aligned_cols=200 Identities=18% Similarity=0.181 Sum_probs=157.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|....... .....+|+|.+..... ......+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~--~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGE--KVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCC--CcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 4689999999999999999998633211 1234689998866432 22333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...++||||++ |+|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 78999999998 599999974 244589999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......++..|+|||.+....++.++|.|+.|.+. |+.++
T Consensus 151 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~~ 206 (279)
T cd05057 151 TDFGLAKLLDVDEKEY---------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV-WELMT 206 (279)
T ss_pred CCCcccccccCcccce---------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH-HHHhc
Confidence 9999998543211110 01112235679999999888999999999999774 55443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=246.70 Aligned_cols=196 Identities=22% Similarity=0.261 Sum_probs=157.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.||+|.++...........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehh
Confidence 37999999999999999999862 3578999999876433322223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d 143 (288)
T cd07833 67 EAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCD 143 (288)
T ss_pred heEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEe
Confidence 99999999999999999865555443 345589999999999999999999999999999999999999988 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc-ccccccccccccccchHHHHh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+++........ ......++..|+|||++.+. .++.++|+|+.|.+. |+++.
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l-~~l~~ 197 (288)
T cd07833 144 FGFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM-AELLD 197 (288)
T ss_pred eecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH-HHHHh
Confidence 9999854322110 01123367889999998887 889999999999654 44443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=219.13 Aligned_cols=256 Identities=22% Similarity=0.272 Sum_probs=201.6
Q ss_pred CCCEEEEeCC-CceeEEee--cccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCC-CCeEEEEEecCCcceeEEEE
Q 000355 1249 LKDESPWKIK-ASILSSIR--AHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICV 1323 (1620)
Q Consensus 1249 D~~i~lWd~~-g~~l~tl~--gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~-tg~~l~~l~gH~~~V~sV~f 1323 (1620)
.|++.|-++. +.-++.+. .-.+.+..|+|+++. ..+++|+. ||+++|||+. ...++..++.|...|.+|.|
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~G----DGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdw 112 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASG----DGSLRLFDLTMPSKPIHKFKEHKREVYSVDW 112 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEec----CceEEEeccCCCCcchhHHHhhhhheEEecc
Confidence 3667777775 33333332 357889999999974 56777776 8999999964 34688999999999999999
Q ss_pred eeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEE
Q 000355 1324 LSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1400 (1620)
Q Consensus 1324 ~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~ 1400 (1620)
++-.++. .|.|+|||+||...++.++++.+| ...|....|+|.
T Consensus 113 n~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh------------------------------~~~Iy~a~~sp~---- 158 (311)
T KOG0277|consen 113 NTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH------------------------------NSCIYQAAFSPH---- 158 (311)
T ss_pred ccccceeEEeeccCCceEeecCCCCcceEeecCC------------------------------ccEEEEEecCCC----
Confidence 8866654 566999999999999999998865 345777888876
Q ss_pred EEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEE
Q 000355 1401 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRL 1480 (1620)
Q Consensus 1401 v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~l 1480 (1620)
.++.++++|.|+++++||++.......+..|. ..+.|+.|+.. +.+.++||+.|+.||.
T Consensus 159 -----~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~------~Eil~cdw~ky----------~~~vl~Tg~vd~~vr~ 217 (311)
T KOG0277|consen 159 -----IPNLFASASGDGTLRLWDVRSPGKFMSIEAHN------SEILCCDWSKY----------NHNVLATGGVDNLVRG 217 (311)
T ss_pred -----CCCeEEEccCCceEEEEEecCCCceeEEEecc------ceeEeeccccc----------CCcEEEecCCCceEEE
Confidence 58899999999999999998754444466544 34666666643 3479999999999999
Q ss_pred EECCCC-cEEEEEEccCCcEEEEE-eCCC-CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eee-cCCEEEE
Q 000355 1481 FDVRSG-NVIASWRAHDGYVTKLA-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV-WGQDVIS 1554 (1620)
Q Consensus 1481 wD~~tg-~~i~~l~gH~~~V~sva-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSp-dg~~LaS 1554 (1620)
||+|.- .++..+.+|.-.|+.|+ +|.. .+|+|+|.|=+++|||...+. ..+.+..-|+.-|.. ||+ ++.++|+
T Consensus 218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d-s~~e~~~~HtEFv~g~Dws~~~~~~vAs 296 (311)
T KOG0277|consen 218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD-SAIETVDHHTEFVCGLDWSLFDPGQVAS 296 (311)
T ss_pred EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch-hhhhhhhccceEEeccccccccCceeee
Confidence 999974 57888999999999999 7764 589999999999999998653 344566778877774 555 4788999
Q ss_pred EeCCc-eEEEe
Q 000355 1555 ISNNK-IGLSS 1564 (1620)
Q Consensus 1555 gs~D~-I~vwd 1564 (1620)
++.|. +.||+
T Consensus 297 ~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 297 TGWDELLYVWN 307 (311)
T ss_pred cccccceeeec
Confidence 99999 99998
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=244.18 Aligned_cols=199 Identities=15% Similarity=0.172 Sum_probs=157.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||+|+||.||+|.+.... .....+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~---~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPG---RKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCC---CCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 47888999999999999999863211 234589999986542 222333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+..++||||+++ +|.+++.. ..+.+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999995 99999874 345688999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++.......... .......+..|+|||++.+..++.+.|+|+.|++. |+.+
T Consensus 150 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il-~ell 204 (268)
T cd05063 150 DFGLSRVLEDDPEGTY--------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM-WEVM 204 (268)
T ss_pred CCccceecccccccce--------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH-HHHH
Confidence 9999985432111100 00111124569999999888899999999999775 4444
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=247.21 Aligned_cols=196 Identities=17% Similarity=0.178 Sum_probs=157.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
...+.++||+|.||+|.+|.- +.+..||||.++.. .......+|. +||++|.+|+|||||+|++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 567889999999999999984 44689999999874 3444556676 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+|..++.+++|+|||+ |||.+++..+............|+.||+.||+||.+.++|||||.+.|+|++.++ ++||+|
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 9999999999999999 7999999865333333444455999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
||++|..-.......++ ...-...|||||-+...+++.++|.|..|.- -||.++.
T Consensus 681 fgmsR~lysg~yy~vqg---------r~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~~ 735 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQG---------RAVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFML 735 (807)
T ss_pred cccccccccCCceeeec---------ceeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHHH
Confidence 99999432211111111 1112346999998888899999999999943 3665543
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.9e-23 Score=218.03 Aligned_cols=279 Identities=18% Similarity=0.199 Sum_probs=210.3
Q ss_pred EEEEEccCC-CEEEEeccC---CCCCcEEEEEeCCCCeEEEEEe--cCCcceeEEEEeeCCCeE---EEeCCcEEEEeCC
Q 000355 1273 RSVAVGQDE-CTVFTAGIG---PGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQ 1343 (1620)
Q Consensus 1273 ~svafspdg-~~LaSgs~d---~~~DgtVrLWdl~tg~~l~~l~--gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~ 1343 (1620)
.++.|||-- .+||.+... =.-.|++.|-++..++-+..+. .-.+.+.+|+|+++...+ +++||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 577888842 233333210 0014899999987555444433 256889999998875543 6779999999954
Q ss_pred CC-ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1344 TG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1344 tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.. .++..+++ |...|.++.++.. .+..++++|.|++||+|
T Consensus 92 ~~s~Pi~~~kE------------------------------H~~EV~Svdwn~~---------~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 92 MPSKPIHKFKE------------------------------HKREVYSVDWNTV---------RRRIFLTSSWDGTIKLW 132 (311)
T ss_pred CCCcchhHHHh------------------------------hhhheEEeccccc---------cceeEEeeccCCceEee
Confidence 22 23444443 4556777777664 46788899999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
|...++.+.++++|.. .|...+|++. .++.++++|.||++++||++.......+..|...+.++
T Consensus 133 ~~~r~~Sv~Tf~gh~~------~Iy~a~~sp~----------~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~c 196 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNS------CIYQAAFSPH----------IPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCC 196 (311)
T ss_pred cCCCCcceEeecCCcc------EEEEEecCCC----------CCCeEEEccCCceEEEEEecCCCceeEEEeccceeEee
Confidence 9999999999997654 4777888763 34899999999999999999644444489999999999
Q ss_pred E--eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecC-CEEEEEeCCc-eEEEeccCCCCCCCcce
Q 000355 1503 A--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSSLSKSADEDGQHR 1576 (1620)
Q Consensus 1503 a--spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1576 (1620)
. ..+..+|+||+.|+.|++||+++-+ .++.++.||.-.|.. |||.. ..|+|+|.|- +++||.++. ++..
T Consensus 197 dw~ky~~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~---ds~~- 271 (311)
T KOG0277|consen 197 DWSKYNHNVLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ---DSAI- 271 (311)
T ss_pred cccccCCcEEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc---hhhh-
Confidence 8 4567799999999999999999865 678899999999995 88874 6789999999 999998632 1111
Q ss_pred eeccceeeecCCCCccccEEEEEEecC-CCEEEEEeCCCcEEEcC
Q 000355 1577 LVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1577 ~~~~kl~~~~~g~~h~~~V~svafsPd-g~lLasgs~DG~IrlWd 1620 (1620)
..+ ..|..-|..+.|++. ...+|++|+|+.+.||+
T Consensus 272 ----e~~-----~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 272 ----ETV-----DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred ----hhh-----hccceEEeccccccccCceeeecccccceeeec
Confidence 111 137778999999985 46899999999999996
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=257.61 Aligned_cols=198 Identities=15% Similarity=0.174 Sum_probs=163.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..+.|++.+.||.|.||.||++++ ..+++..|+|++.......++.+ .|.+||+.+ .|||++
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~------~~~~~~aa~kI~~~~~d~deEiE-----------~eynil~~~~~hpnv~ 79 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRH------VKTGQLAAIKIMDPTEDEEEEIE-----------LEYNMLKKYSHHPNVA 79 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEee------eecCceeeeEeecCCccccHHHH-----------HHHHHHHhccCCCCcc
Confidence 367899999999999999999986 24678889999876544332221 688888877 589999
Q ss_pred ceeeEEEe-----CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 181 PVLGLLKT-----SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~-----~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
.+|++|.. ++.+|||||||. |+.-|+++...+..+.|..+.+|++.++.||.+||.+.+||||||-.|||++.+
T Consensus 80 ~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 80 TFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN 159 (953)
T ss_pred eEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc
Confidence 99999974 358999999999 599999997777889999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-----cccccccccccccccchHHHHhhh
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-----~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+ .|||+|||++....... .....|.|||+|||||++.. ..|+..+|.|+.| ++.+
T Consensus 160 ~--~VKLvDFGvSaQldsT~-----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG-------ITaI 219 (953)
T KOG0587|consen 160 A--EVKLVDFGVSAQLDSTV-----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG-------ITAI 219 (953)
T ss_pred C--cEEEeeeeeeeeeeccc-----------ccccCcCCCcccccceeeecccCCCCCcccccchhhcc-------ceee
Confidence 9 89999999998543211 12345779999999998863 4578899999999 5556
Q ss_pred hcccCCC
Q 000355 330 NKLAGRR 336 (1620)
Q Consensus 330 n~~~gRs 336 (1620)
.+-.|..
T Consensus 220 EladG~P 226 (953)
T KOG0587|consen 220 EMAEGAP 226 (953)
T ss_pred hhcCCCC
Confidence 6666665
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=231.92 Aligned_cols=282 Identities=18% Similarity=0.222 Sum_probs=218.3
Q ss_pred ccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1218 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.-.+.||.+.|+++..+-.. ...++|||.||.|++||+. ..+..+++.|.+.|+.+++.. ..++|+|. |++
T Consensus 59 v~~L~gHrdGV~~lakhp~~--ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd----DKt 130 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNK--LSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGD----DKT 130 (433)
T ss_pred hhhccccccccchhhcCcch--hhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecC----Ccc
Confidence 45678999999986433221 1228999999999999999 678999999999999999998 56888887 899
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
|+.|.+.- ..+.++-| ...+..|.-+..+..+++|...|.|||..-..+++.+.-
T Consensus 131 vK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw----------------------- 185 (433)
T KOG0268|consen 131 VKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW----------------------- 185 (433)
T ss_pred eeeeeccC-Ccceeeec-cccccccccccccccccccCceeeecccccCCccceeec-----------------------
Confidence 99999764 46666653 456777776566667799999999999887666665542
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCC
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1455 (1620)
.-+.+.++.++|.. ..|++|+.|++|.+||++++.+++.... ...-+.|||+| .
T Consensus 186 -----------------G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-------~mRTN~IswnP-e 240 (433)
T KOG0268|consen 186 -----------------GADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-------TMRTNTICWNP-E 240 (433)
T ss_pred -----------------CCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-------eccccceecCc-c
Confidence 12224445555544 4566777999999999999998876542 22346788775 3
Q ss_pred ccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1456 ~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
+-.+++|+.|..++.||+|.. .++...++|.+.|.+|. +|.|+-++|||.|++|+|+.++.+....++
T Consensus 241 ----------afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY 310 (433)
T KOG0268|consen 241 ----------AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY 310 (433)
T ss_pred ----------ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh
Confidence 346899999999999999975 57888899999999999 999999999999999999999887544433
Q ss_pred EeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1534 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1534 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.-+ .-..|.| ||.|.++++|||+|+ |++|...++
T Consensus 311 htk-RMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 311 HTK-RMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred hHh-hhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 111 1224555 999999999999999 999996543
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=244.30 Aligned_cols=192 Identities=18% Similarity=0.110 Sum_probs=146.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|... ....+..+|+|.++.... ......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSAS-VQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46999999999999852 123457799998865432 22233444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 190 GLITSVIPKTP-YTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..+++||||++ |+|.+++.... ....+...++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 99999999999 59999997422 22456667788999999999999999999999999999999988 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhccccc-------ccccccccccccccchHHHH
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-------~y~~~~d~W~~G~isnfeyL 326 (1620)
+++........ .. .....++..|+|||++.+. .++.++|+|+.|.+. |+.+
T Consensus 146 ~~~~~~~~~~~---~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~ 203 (269)
T cd05087 146 LSHNKYKEDYY---VT------PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI-WELF 203 (269)
T ss_pred ccccccCccee---ec------CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH-HHHH
Confidence 99742211100 00 0112246779999988643 357899999999765 4444
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=242.48 Aligned_cols=193 Identities=15% Similarity=0.127 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+ ..+..+|+|.+..... ....+. +|+++++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~-------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSM---SVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEe-------cCCccEEEEecCCChh---HHHHHH--------HHHHHHHhcCCCCcceE
Confidence 57899999999999999999975 3445699998865321 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...++||||++ ++|.+++.......++...+..++.||+.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999887 77899999998 5999999854455678888899999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||++....++..+|.|+.|++. |+.++
T Consensus 144 ~d~~~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~~l~t 198 (260)
T cd05073 144 ADFGLARVIEDNEYTA----------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-MEIVT 198 (260)
T ss_pred CCCcceeeccCCCccc----------ccCCcccccccCHhHhccCCcCccccchHHHHHH-HHHHh
Confidence 9999997432111000 0011234569999999988899999999999776 55443
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=224.81 Aligned_cols=197 Identities=19% Similarity=0.264 Sum_probs=156.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc-cCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~-~l~HpNIv~ 181 (1620)
.++...+..||+|+||.|-+-++ ...|.+.|+|.+... ...+..++.+ +|+.+.. ....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh------~~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRH------IQSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheee------ccCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 34667788999999999988775 367899999999764 3445555555 7888754 447899999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+|+.+.....++|.||.|..+|..+.+. ..++..+|.-+-.|+..++.||.|||+ ..|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888776653 467788999999999999999999999 4899999999999999999 9
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----ccccccccccccccccchHHHHhhhhcccC
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
+||||||.+......-.. + ..++|. .|||||.+. +..|+-++|+|+.| ++.+++..+
T Consensus 188 VKiCDFGIsG~L~dSiAk-----t----~daGCk---pYmaPEri~~e~n~~gY~vksDvWSLG-------ItmiElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDSIAK-----T----MDAGCK---PYMAPERINPELNQKGYSVKSDVWSLG-------ITMIEMAIL 248 (282)
T ss_pred EEEcccccceeehhhhHH-----H----HhcCCC---ccCChhhcCcccCcccceeehhhhhhh-------hhhhhhhhc
Confidence 999999999854322111 1 012333 599999765 45899999999999 445555555
Q ss_pred C
Q 000355 335 R 335 (1620)
Q Consensus 335 R 335 (1620)
|
T Consensus 249 r 249 (282)
T KOG0984|consen 249 R 249 (282)
T ss_pred c
Confidence 4
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=246.41 Aligned_cols=204 Identities=15% Similarity=0.062 Sum_probs=157.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ....+..+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRD-GDAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCC-CCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 357999999999999999999863211 11256789999886532 222233455 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
++++.+.+..++||||++ ++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+|||++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 999999999999999998 599999974321 25788899999999999999999999999999999999986542
Q ss_pred -eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 257 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 257 -~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
..+||+|||+++.......... . ..-..+..|||||++.+..++.++|+|+.|++. |+++
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~-~--------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~ 215 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYRK-G--------GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL-WEIF 215 (277)
T ss_pred CcceEeccCccccccCCccceec-C--------CCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH-HHHH
Confidence 2689999999985421110000 0 000124569999999988999999999999876 5555
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=235.05 Aligned_cols=272 Identities=17% Similarity=0.244 Sum_probs=216.1
Q ss_pred ccCcEEEEEEccCC--CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCC
Q 000355 1268 HHGALRSVAVGQDE--CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1268 H~~~V~svafspdg--~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~ 1343 (1620)
-.++|.+++|+|.. ...+|+| ..|.|++..+....+++....+.|.+++|..||..++.+ .|.|+|+|.+
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k 98 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK 98 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence 45789999999954 3455555 689999999888888888889999999999999998666 5899999977
Q ss_pred CCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEE
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1423 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwD 1423 (1620)
+...++.+..| +.++..+.|++. ++..+++|++|+.+++||
T Consensus 99 ~r~iLR~~~ah------------------------------~apv~~~~f~~~---------d~t~l~s~sDd~v~k~~d 139 (487)
T KOG0310|consen 99 SRVILRQLYAH------------------------------QAPVHVTKFSPQ---------DNTMLVSGSDDKVVKYWD 139 (487)
T ss_pred cHHHHHHHhhc------------------------------cCceeEEEeccc---------CCeEEEecCCCceEEEEE
Confidence 64445555443 445566666654 567788999999999999
Q ss_pred CCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEEEE
Q 000355 1424 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1424 l~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~sv 1502 (1620)
+.++.....+.+| .+.|+|.++++. ++..++||+.||.|++||+|+. ..+..+. |..+|-+|
T Consensus 140 ~s~a~v~~~l~~h------tDYVR~g~~~~~----------~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~v 202 (487)
T KOG0310|consen 140 LSTAYVQAELSGH------TDYVRCGDISPA----------NDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESV 202 (487)
T ss_pred cCCcEEEEEecCC------cceeEeeccccC----------CCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeE
Confidence 9998865566654 556899988753 3468999999999999999987 6677776 99999999
Q ss_pred E-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceee
Q 000355 1503 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLV 1578 (1620)
Q Consensus 1503 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~ 1578 (1620)
. -|.|..++|++ .+.|++||+-+|. +.+..+..|...|+| +..++..|+|||-|+ |++||+.. .
T Consensus 203 l~lpsgs~iasAg-Gn~vkVWDl~~G~-qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~-------~--- 270 (487)
T KOG0310|consen 203 LALPSGSLIASAG-GNSVKVWDLTTGG-QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN-------Y--- 270 (487)
T ss_pred EEcCCCCEEEEcC-CCeEEEEEecCCc-eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccc-------e---
Confidence 9 88999999998 5589999999773 444555669999997 777889999999999 99999641 1
Q ss_pred ccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1579 PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1579 ~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
....+-+..++|.+++.+|+++.++.|..||.+-+
T Consensus 271 -----Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 271 -----KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred -----EEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 11111246788999999999999999999998754
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=245.33 Aligned_cols=200 Identities=16% Similarity=0.117 Sum_probs=157.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|+..++||+|+||.||++..... ....++..+|+|.+... .......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNL-LPEQDKMLVAVKALKEA--SESARQDFQ--------REAELLTVLQHQHIVRFY 73 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecC-CCCCCceEEEEEecCcC--CHHHHHHHH--------HHHHHHhcCCCCCCceEE
Confidence 4678899999999999999874221 11245678999987653 233333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
+++...+..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~ni 153 (280)
T cd05092 74 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNC 153 (280)
T ss_pred EEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhE
Confidence 99999999999999998 599999974321 3478888999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|+|. |+.+
T Consensus 154 l~~~~~--~~kL~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 218 (280)
T cd05092 154 LVGQGL--VVKIGDFGMSRDIYSTDYYR---------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL-WEIF 218 (280)
T ss_pred EEcCCC--CEEECCCCceeEcCCCceee---------cCCCccccccccCHHHhccCCcCchhhHHHHHHHH-HHHH
Confidence 999988 89999999997432111000 01112245679999999999999999999999775 4444
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=229.33 Aligned_cols=265 Identities=20% Similarity=0.246 Sum_probs=227.2
Q ss_pred eEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeE
Q 000355 1242 FLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320 (1620)
Q Consensus 1242 ~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~s 1320 (1620)
++.||+.|+++.++|.. ...+.+++||+..|+++.|+++...++++|. |..|+||.+....+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 38999999999999988 7789999999999999999999999999998 899999999988888888899999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCce
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1398 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1398 (1620)
+..+|.|.++ +|.||+..+.|.++|.++....... +.-.+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~--------------------------------------s~v~~ 350 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET--------------------------------------SDVEY 350 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc--------------------------------------cccee
Confidence 9999999999 6669999999999999876554321 01137
Q ss_pred EEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcE
Q 000355 1399 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1478 (1620)
Q Consensus 1399 t~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I 1478 (1620)
++.+++|||..+.+|+.||.|++||+.++..+..|.+|.+ .|.+|+|+ -+|-|+|++++|+.|
T Consensus 351 ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~------~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 351 TSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTG------PVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred EEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCC------ceeEEEec-----------cCceEEEEEecCCeE
Confidence 8888999999999999999999999999998888887654 58999986 456799999999999
Q ss_pred EEEECCCCcEEEEEEcc-CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEE
Q 000355 1479 RLFDVRSGNVIASWRAH-DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVIS 1554 (1620)
Q Consensus 1479 ~lwD~~tg~~i~~l~gH-~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaS 1554 (1620)
++||+|..+...++.-. ...|.++. .+.|.+|+.++.|=+|++++-.+....++..+..|.+..++ |.-..+++++
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s 493 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLAS 493 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEee
Confidence 99999988877777633 24689999 88899999999888888888666555777788888866664 8888899999
Q ss_pred EeCCc-eEEEec
Q 000355 1555 ISNNK-IGLSSL 1565 (1620)
Q Consensus 1555 gs~D~-I~vwdl 1565 (1620)
+|.|. .+++.+
T Consensus 494 ~smd~~l~~~a~ 505 (506)
T KOG0289|consen 494 TSMDAILRLYAL 505 (506)
T ss_pred ccchhheEEeec
Confidence 99999 777653
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=242.05 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=154.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+...... ...+. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTW-------NGTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPL 66 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEE-------cCCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeE
Confidence 36799999999999999999985 23346899988654322 22334 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l 143 (260)
T cd05069 67 YAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKI 143 (260)
T ss_pred EEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEE
Confidence 99875 4568999999985 999999854445578889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||...+..++..+|+|+.|.+. |++++
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l-~el~t 198 (260)
T cd05069 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVT 198 (260)
T ss_pred CCCccceEccCCcccc----------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHH-HHHHh
Confidence 9999998532111000 0112245679999999888899999999999776 55544
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=246.18 Aligned_cols=214 Identities=12% Similarity=0.015 Sum_probs=150.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHH-hcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~-~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+|++.+.||+|+||.||+|.+... ...+..+|+|................+ ......+.+...+..+.|+||++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~---~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASD---HCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCC---cccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 35899999999999999999986221 112456677764432221111100100 00001124555667789999999
Q ss_pred eeeEEEeCC----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 182 VLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 182 l~~~~~~~~----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+++++.... ..+++||++..++.+++.. ....++..++.++.|++.||.|||+++|+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~-- 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN-- 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--
Confidence 999876554 4578899988888888763 33457888899999999999999999999999999999999888
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
.+||+|||+|+............. .......||+.|+|||+..+..|+.++|+|+.|++. |+++.+
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l-~el~~g 229 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM-LKWAGI 229 (294)
T ss_pred cEEEEEcCCceeeccCCccccccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH-HHHHhC
Confidence 899999999985432111100000 011223489999999999999999999999999765 555443
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=243.23 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=153.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ..+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 45899999999999999999874 36778999986432 122344 89999999999999999
Q ss_pred eeEEE-eCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLK-TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~-~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++. .++..++||||++ ++|.++++......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 99764 4567999999998 4999999854445578889999999999999999999999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+|||+++...... ....++..|+|||++.+..++.++|+|+.|++. |+++
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~-~~l~ 193 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIY 193 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH-HHHH
Confidence 99999988432110 011134579999999998999999999999776 4444
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=248.06 Aligned_cols=203 Identities=16% Similarity=0.164 Sum_probs=156.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc--------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG--------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 174 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~--------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l 174 (1620)
..+|++.+.||+|+||.||+|++..... .......||+|.+... ........+. +|+++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHH--------HHHHHHHhC
Confidence 3589999999999999999988532100 0112346899998753 2223333444 899999999
Q ss_pred CcccccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000355 175 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 243 (1620)
Q Consensus 175 ~HpNIv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 243 (1620)
+||||+++++++...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999995 9999986321 11357778889999999999999999999999
Q ss_pred CCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchH
Q 000355 244 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 244 LKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnf 323 (1620)
|||+|||++.++ .+||+|||+++........ .......++..|+|||++.+..++.++|+|+.|.+. |
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l-~ 222 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDYY---------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL-W 222 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcce---------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHH-H
Confidence 999999999988 8999999999843211100 001122346789999999888899999999999776 4
Q ss_pred HHH
Q 000355 324 EYL 326 (1620)
Q Consensus 324 eyL 326 (1620)
+++
T Consensus 223 el~ 225 (295)
T cd05097 223 EMF 225 (295)
T ss_pred HHH
Confidence 444
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=242.16 Aligned_cols=272 Identities=18% Similarity=0.282 Sum_probs=215.6
Q ss_pred ccccccCCCceec-cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEE-EEEcc-CCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF-PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRS-VAVGQ-DECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~-~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~s-vafsp-dg~~LaSgs~d~ 1291 (1620)
...+.||..-|.+ ..-++.+ ++++|.|+++++|+-.++ ....+.+|.+-|.+ +++-+ ++-.+++|+.
T Consensus 7 s~~l~gH~~DVr~v~~~~~~~-----i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~-- 79 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDGVC-----IISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGM-- 79 (745)
T ss_pred EEEeccCccchheeEecCCeE-----EeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecc--
Confidence 3457788877765 2233344 999999999999998744 33568899999888 88876 3446999997
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
|.+|.+|......++.+++||+..|.+++...++..+ +|+|.|+++|-. |++...+.+|
T Consensus 80 --D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH---------------- 139 (745)
T KOG0301|consen 80 --DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGH---------------- 139 (745)
T ss_pred --cceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCc----------------
Confidence 9999999999999999999999999999977777755 788999999974 5665555554
Q ss_pred ccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEe
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1450 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva 1450 (1620)
+..|+++.+-+. + .++|||.|++||+|.- ++++++|.+|.. .|+.++
T Consensus 140 --------------~asVWAv~~l~e----------~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD------~VRgL~ 186 (745)
T KOG0301|consen 140 --------------TASVWAVASLPE----------N-TYVTGSADKTIKLWKG--GTLLKTFSGHTD------CVRGLA 186 (745)
T ss_pred --------------chheeeeeecCC----------C-cEEeccCcceeeeccC--Cchhhhhccchh------heeeeE
Confidence 445666655542 3 8999999999999985 788899997654 488888
Q ss_pred eeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1451 ~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
+-+ +..+++++.||.|++||+ +|+++..+.||.+-|.+++ ..++..++|+++|++++||+..
T Consensus 187 vl~------------~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~---- 249 (745)
T KOG0301|consen 187 VLD------------DSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD---- 249 (745)
T ss_pred Eec------------CCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----
Confidence 743 246899999999999999 7999999999999999999 8888999999999999999876
Q ss_pred CCCeEeecCCCCEEEE-eecCCEEEEEeCCc-eEEEecc
Q 000355 1530 SQPTVFKGHTNGISGF-SVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~af-Spdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+...+.-.+..|++. ...+..+++|+.|| |+||..+
T Consensus 250 e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 3334554445567752 23355677777788 9999976
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=240.87 Aligned_cols=193 Identities=17% Similarity=0.133 Sum_probs=153.7
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.+... ......+|+|.+...... ...+.+. +|+.+++.++||||+++++++..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~---~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTS---GGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEecC---CCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 4689999999999986321 123457999999775433 3334444 89999999999999999999988
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
...++||||++ ++|.+.+.......+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 89999999998 5999999853335678899999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
........... .....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 146 ~~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l-~el~ 194 (257)
T cd05040 146 ALPQNEDHYVM--------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL-WEMF 194 (257)
T ss_pred cccccccceec--------ccCCCCCceecCHHHhcccCcCchhhhHHHHHHH-HHHH
Confidence 54321111000 0112356779999999999999999999999776 4444
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=242.62 Aligned_cols=188 Identities=19% Similarity=0.168 Sum_probs=157.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.. .++.+|+|.+..... ..+++. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 45789999999999999999984 368899999975422 233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+..++||||++ ++|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 999999999999999999 5999999854444789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||.++....... ....+..|+|||.+....++.++|+|+.|.+. |+.+
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il-~~l~ 193 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIY 193 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHH-HHHH
Confidence 99999985421100 01134569999999888899999999999775 4443
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-21 Score=214.59 Aligned_cols=277 Identities=17% Similarity=0.187 Sum_probs=223.0
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEe--CCcEE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASC--DGTLH 1338 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~--DgtV~ 1338 (1620)
+.++.-.+.|+++.|+++|..+++++. |.+++|+|..+|++++++..++-.|..++|......+ +|. |.+||
T Consensus 8 k~f~~~~~~i~sl~fs~~G~~litss~----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDGLLLITSSE----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred cccccCCCceeEEEecCCCCEEEEecC----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 445556778999999999999999987 8899999999999999999888999999998777766 444 99999
Q ss_pred EEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
.-++.+.+.++.|.+|.. .|+.+..+|-++.+++++.|++
T Consensus 84 yLsl~dNkylRYF~GH~~----------------------------------------~V~sL~~sP~~d~FlS~S~D~t 123 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPGHKK----------------------------------------RVNSLSVSPKDDTFLSSSLDKT 123 (311)
T ss_pred EEEeecCceEEEcCCCCc----------------------------------------eEEEEEecCCCCeEEecccCCe
Confidence 999999999999998742 3667777778899999999999
Q ss_pred EEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC--cEEEEEE---
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWR--- 1493 (1620)
Q Consensus 1419 VrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg--~~i~~l~--- 1493 (1620)
||+||++..++...+..... ..++| .|+|-++|+|...+.|++||+|+- .+..++.
T Consensus 124 vrLWDlR~~~cqg~l~~~~~--------pi~Af-----------Dp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~ 184 (311)
T KOG1446|consen 124 VRLWDLRVKKCQGLLNLSGR--------PIAAF-----------DPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITD 184 (311)
T ss_pred EEeeEecCCCCceEEecCCC--------cceeE-----------CCCCcEEEEecCCCeEEEEEecccCCCCceeEccCC
Confidence 99999998887765553222 22344 377789999998889999999964 3555554
Q ss_pred ccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCE----E-EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1494 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI----S-GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1494 gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V----~-afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+-....+.+. +|||++++-+...+.+++.|.-+| ....++.++...- . +|+||++++++|++|| |.+|+++
T Consensus 185 ~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G--~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 185 NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG--TVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred CCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC--cEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 3356788899 999999999999999999999998 4566777776543 3 4999999999999999 9999985
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+|....+. +| .+.++++++.|+|.-.++|+++ ..+-+|
T Consensus 263 -----tg~~v~~~-------~~-~~~~~~~~~~fnP~~~mf~sa~--s~l~fw 300 (311)
T KOG1446|consen 263 -----TGKKVAVL-------RG-PNGGPVSCVRFNPRYAMFVSAS--SNLVFW 300 (311)
T ss_pred -----CCcEeeEe-------cC-CCCCCccccccCCceeeeeecC--ceEEEE
Confidence 34332211 12 2567899999999999998774 556666
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=238.31 Aligned_cols=187 Identities=17% Similarity=0.162 Sum_probs=149.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 4699999999999874 456789999986532 222222344 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++... ...+.+..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 99999999998 5999988742 34578889999999999999999999999999999999999998 89999999997
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
....... ... ....++..|+|||++.+..++.++|+|+.|.+. |+.+
T Consensus 142 ~~~~~~~----~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll-~~~~ 188 (250)
T cd05085 142 QEDDGIY----SSS------GLKQIPIKWTAPEALNYGRYSSESDVWSYGILL-WETF 188 (250)
T ss_pred ecccccc----ccC------CCCCCcccccCHHHhccCCCCchhHHHHHHHHH-HHHh
Confidence 4321100 000 111235579999999988899999999999765 4433
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=240.95 Aligned_cols=198 Identities=22% Similarity=0.203 Sum_probs=155.9
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
++.+.||.|+||.||+|.... .....+..|+||.++.. ...+...++. +|++++++++||||+++++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 467899999999999999742 12356788999999552 3334455666 899999999999999999999
Q ss_pred EeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
...+.+++||||++ |+|.+++.......++......++.||+.||.|||+++|+||||+|+|||++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 98888999999998 5999999965456789999999999999999999999999999999999999999 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+++........ ...........|+|||.+....++.++|+|+.|.+. ||.++
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l-~ei~~ 200 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLL-YEILT 200 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHH-HHHHT
T ss_pred ccccccccccc---------cccccccccccccccccccccccccccccccccccc-ccccc
Confidence 99854211111 111222355679999999998999999999999554 44443
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-24 Score=248.69 Aligned_cols=205 Identities=17% Similarity=0.183 Sum_probs=172.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc------c
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 177 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H------p 177 (1620)
.+|.+....|+|-|+.|..|.+. ..|..||||+|..+.... +.- ++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~---KtG--------l~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMH---KTG--------LKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHh---hhh--------hHHHHHHHHhhccCchhhh
Confidence 38999999999999999999873 346799999998754332 222 389999999953 4
Q ss_pred cccceeeEEEeCCEEEEEEeCCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
++++|+-.|...+++|||+|-+.-+|.++++. ..+..+....++.|++|+..||..|-..||+|.||||+|||+++...
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 89999999999999999999999999999984 44556888999999999999999999999999999999999998874
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
.+||||||.|..... +..+| +--+.+|+|||++.+.+|+...|.|+.||-. ||..++--+|.|++
T Consensus 575 -iLKLCDfGSA~~~~e-----neitP--------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctL-YElYtGkIlFpG~T 639 (752)
T KOG0670|consen 575 -ILKLCDFGSASFASE-----NEITP--------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTL-YELYTGKILFPGRT 639 (752)
T ss_pred -eeeeccCcccccccc-----ccccH--------HHHHHhccCcceeecCcccCCccceeeceee-EEeeccceecCCCC
Confidence 899999999985432 12222 2245689999999999999999999999877 88888888999998
Q ss_pred CCCC
Q 000355 337 WGDY 340 (1620)
Q Consensus 337 ~~dl 340 (1620)
.|++
T Consensus 640 NN~M 643 (752)
T KOG0670|consen 640 NNQM 643 (752)
T ss_pred cHHH
Confidence 7654
|
|
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=239.78 Aligned_cols=271 Identities=21% Similarity=0.337 Sum_probs=215.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE--EEEecCCcceeE-EEEee-CCCeE--EEeC
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV--SGYYGHEEVVND-ICVLS-SSGRI--ASCD 1334 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l--~~l~gH~~~V~s-V~f~~-~~~~l--aS~D 1334 (1620)
.-+.+.||...|+.|++.++. .+++||. ||++++|+-..++.+ ..+.+|.+.|.. +++.+ +..++ ++.|
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sR----d~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSR----DGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCC----CCceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc
Confidence 457899999999999988665 7889997 899999998766554 357789998887 99875 33334 5669
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
++|.+|...+..+..++.+|... |+|++...++. +++||
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~sn----------------------------------------VC~ls~~~~~~-~iSgS 119 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSN----------------------------------------VCSLSIGEDGT-LISGS 119 (745)
T ss_pred ceEEEEecCCCCchhhhhccccc----------------------------------------eeeeecCCcCc-eEecc
Confidence 99999999999999999887532 66666666666 99999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.|.|+++|-. +++...+.+| ...|.++++-+ .+ .++|||.|.+|++|.- ++.++++.|
T Consensus 120 WD~TakvW~~--~~l~~~l~gH------~asVWAv~~l~-----------e~-~~vTgsaDKtIklWk~--~~~l~tf~g 177 (745)
T KOG0301|consen 120 WDSTAKVWRI--GELVYSLQGH------TASVWAVASLP-----------EN-TYVTGSADKTIKLWKG--GTLLKTFSG 177 (745)
T ss_pred cccceEEecc--hhhhcccCCc------chheeeeeecC-----------CC-cEEeccCcceeeeccC--Cchhhhhcc
Confidence 9999999975 5666667765 44577877643 33 7899999999999986 789999999
Q ss_pred cCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEe--ecCCEEEEEeCCc-eEEEeccCCCCC
Q 000355 1495 HDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS--VWGQDVISISNNK-IGLSSLSKSADE 1571 (1620)
Q Consensus 1495 H~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afS--pdg~~LaSgs~D~-I~vwdl~~~~~~ 1571 (1620)
|.+.|+.++--++..++|||.||.|+.|++ ++ ..+.++.||++-|.+++ .+++.++|++.|+ +++|+..
T Consensus 178 HtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----- 249 (745)
T KOG0301|consen 178 HTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DG--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----- 249 (745)
T ss_pred chhheeeeEEecCCCeEeecCCceEEEEec-cC--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-----
Confidence 999999999434556899999999999999 45 66789999999999855 6788999999999 9999953
Q ss_pred CCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1572 DGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1572 ~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+ .+.+. . ....|+++++.++|.++ +|+.||.||||
T Consensus 250 --e~---~q~I~-l-----PttsiWsa~~L~NgDIv-vg~SDG~VrVf 285 (745)
T KOG0301|consen 250 --EC---VQVIT-L-----PTTSIWSAKVLLNGDIV-VGGSDGRVRVF 285 (745)
T ss_pred --ce---EEEEe-c-----CccceEEEEEeeCCCEE-EeccCceEEEE
Confidence 11 11111 0 22369999999999865 67779999998
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=249.40 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=156.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEeccccc-ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSG-CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+|++.+.||+|+||.||+|++....+ .......+|+|.+... .......++. +|+++++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 479999999999999999998522111 1123457899988643 2233334444 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+++||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 9999999999999999998 59999997421 22466777888999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++......... . ...-.++..|||||++.+..++.++|+|+.|++. |+++
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 230 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIF 230 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---c------ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH-HHHH
Confidence 999999998 89999999998532211000 0 0011134579999999999999999999999776 5554
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
.
T Consensus 231 ~ 231 (334)
T cd05100 231 T 231 (334)
T ss_pred h
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-22 Score=248.16 Aligned_cols=283 Identities=15% Similarity=0.148 Sum_probs=224.1
Q ss_pred ccCCC-ceec--cCCCCCCCCCCeEEEEc--CCCCEEEEeCC-------------CceeEEeecccCcEEEEEEccCCCE
Q 000355 1222 MKCEP-WFWF--PTPAASWDGPDFLGRVG--GLKDESPWKIK-------------ASILSSIRAHHGALRSVAVGQDECT 1283 (1620)
Q Consensus 1222 ~gH~~-~V~~--~Spdg~~~~~~~lasgS--~D~~i~lWd~~-------------g~~l~tl~gH~~~V~svafspdg~~ 1283 (1620)
.+|.+ .|.+ .+|||.. +|||| .|+.+++|+.+ .+.+.+...|.+.|+||.|++||++
T Consensus 9 v~H~~~~IfSIdv~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~ 83 (942)
T KOG0973|consen 9 VNHNEKSIFSIDVHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSY 83 (942)
T ss_pred cccCCeeEEEEEecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCe
Confidence 34544 3443 8899987 99999 99999999965 1245677789999999999999999
Q ss_pred EEEeccCCCCCcEEEEEeCCC------------------CeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCC
Q 000355 1284 VFTAGIGPGFKGTVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1284 LaSgs~d~~~DgtVrLWdl~t------------------g~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~ 1343 (1620)
||+||. |+.|.||.... .++...+.||...|.+|+|+|++.+++|+ |++|.|||..
T Consensus 84 lAsGSD----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 84 LASGSD----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred EeeccC----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc
Confidence 999997 89999998762 14788899999999999999999999776 9999999999
Q ss_pred CCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEE
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1423 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwD 1423 (1620)
+.+++.++.+|.. . |-.+.|.|-|+++++-+.|++|++|+
T Consensus 160 tF~~~~vl~~H~s------------------------------~----------VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 160 TFELLKVLRGHQS------------------------------L----------VKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred cceeeeeeecccc------------------------------c----------ccceEECCccCeeeeecCCceEEEEE
Confidence 9999999987642 2 33444555699999999999999999
Q ss_pred CCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEec----CCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1424 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS----SGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1424 l~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~----Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
+.+..+.+.+.++-....-. .-|.-.+|+|||.+|+++.. -.++.|.+-.+-+.-..+-||..++
T Consensus 200 t~dw~i~k~It~pf~~~~~~-----------T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~ 268 (942)
T KOG0973|consen 200 TSDWGIEKSITKPFEESPLT-----------TFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPV 268 (942)
T ss_pred cccceeeEeeccchhhCCCc-----------ceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCce
Confidence 88877777776554322222 22344567799999998753 3468899988888889999999999
Q ss_pred EEEE-eC------CC-------C----EEEEEeCCCcEEEEECCCCCCCCCeEe-ecCCCCEE--EEeecCCEEEEEeCC
Q 000355 1500 TKLA-AP------ED-------H----LLVSSSLDKTLRIWDLRRNWPSQPTVF-KGHTNGIS--GFSVWGQDVISISNN 1558 (1620)
Q Consensus 1500 ~sva-sp------dg-------~----~LaSgS~DgtI~IWDl~~~~~~~~~~l-~gH~~~V~--afSpdg~~LaSgs~D 1558 (1620)
.++. .| .. . .+|+||.|++|.||..... +++... .-...+|. +|+|||-.|..+|.|
T Consensus 269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--RPl~vi~~lf~~SI~DmsWspdG~~LfacS~D 346 (942)
T KOG0973|consen 269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--RPLFVIHNLFNKSIVDMSWSPDGFSLFACSLD 346 (942)
T ss_pred EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--CchhhhhhhhcCceeeeeEcCCCCeEEEEecC
Confidence 9998 54 11 1 6789999999999998665 333322 22334566 599999999999999
Q ss_pred c-eEEEecc
Q 000355 1559 K-IGLSSLS 1566 (1620)
Q Consensus 1559 ~-I~vwdl~ 1566 (1620)
| |.+..++
T Consensus 347 GtV~~i~Fe 355 (942)
T KOG0973|consen 347 GTVALIHFE 355 (942)
T ss_pred CeEEEEEcc
Confidence 9 9999986
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-24 Score=255.78 Aligned_cols=229 Identities=14% Similarity=0.178 Sum_probs=189.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.-++.++||.|.||+|++|+-+... +....||||.++.+ ...+...+|+ .|..||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pg---kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPG---KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccCCC---CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 4567899999999999999864432 45688999999875 4455566777 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+......+.||.|||+ |+|..+|+.+ .+.++.-+..-+++.|+.|++||-+.|+|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 9999999999999999 7999999964 46688888888999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceeccccc--CccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCCCCc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYT 341 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~ 341 (1620)
||++|...+.... .... -|| ...|.|||.+.-..++.++|.|+.|.+. + ..-.|.-|+|.|++
T Consensus 775 FGLSRvledd~~~---~ytt-------~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVm-W----EVmSyGERPYWdmS 839 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA---AYTT-------LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-W----EVMSYGERPYWDMS 839 (996)
T ss_pred ccceeecccCCCc---cccc-------cCCccceeecChhHhhhcccCchhhccccceEE-E----EecccCCCcccccc
Confidence 9999965433211 1111 112 2459999999999999999999999653 2 23457789999999
Q ss_pred CCcccceee-ccCCCCCCCCCCC
Q 000355 342 FHMVMPWVI-DFSTKPDENFDSG 363 (1620)
Q Consensus 342 q~pv~pwv~-d~~~~~~~~~~~~ 363 (1620)
..-|+.-|- +|-.+++-+.|..
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~a 862 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAA 862 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHH
Confidence 999999998 7877777777654
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=238.20 Aligned_cols=194 Identities=20% Similarity=0.160 Sum_probs=156.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.+.... ..+..+|+|.+....... ....+. +|+++++.++|+||+++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD---GKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecCC---CCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 47999999999999973211 337889999987643322 233444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 190 GLITSVIPKTP-YTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
..+++||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 99999999996 69999998431 36789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||.++......... ......++..|+|||.+....++.++|+|+.|.+. |+++.
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~ 202 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL-WEIFT 202 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHHH-HHHHh
Confidence 9999998543221100 01122357789999999888999999999999776 55543
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-23 Score=242.17 Aligned_cols=197 Identities=16% Similarity=0.107 Sum_probs=156.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|+..... ...+.+.+++|.+..... ......+. +|++++++++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~ 73 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIE-EEGGETLVLVKALQKTKD-ENLQSEFR--------RELDMFRKLSHKNVVRL 73 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCC-cCCCcceEEEEccCCccc-hHHHHHHH--------HHHHHHHhcCCcceeee
Confidence 367999999999999999999963322 123457899998865321 11233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++...+..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 74 LGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred EEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC
Confidence 999999899999999999 599999985331 158899999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
+ .+||+|||+++........ . .....++..|+|||.+.+..++...|+|+.|.+.
T Consensus 154 ~--~~~l~~~~~~~~~~~~~~~-----~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 154 R--EVKVSLLSLSKDVYNSEYY-----K-----LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred C--cEEEcccccccccCccccc-----c-----cCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 8 8999999998743211000 0 0111245679999998888889999999999765
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=225.58 Aligned_cols=278 Identities=15% Similarity=0.238 Sum_probs=217.2
Q ss_pred CcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce
Q 000355 1270 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL 1347 (1620)
Q Consensus 1270 ~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~ 1347 (1620)
..+.++...+....++|||. |+++.++|..+++.+.+|+||...|+++.|+++...+ +|.|..|+||......+
T Consensus 220 pgi~ald~~~s~~~ilTGG~----d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~ 295 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGE----DKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE 295 (506)
T ss_pred CCeeEEeecCCCCcceecCC----CCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC
Confidence 45677777777778999998 8999999999999999999999999999999988777 67799999999876554
Q ss_pred EEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC
Q 000355 1348 LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1427 (1620)
Q Consensus 1348 i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg 1427 (1620)
......| ...|+.+..+|.|+++++++.||+.-+.|+++|
T Consensus 296 ~~~~~~h----------------------------------------~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g 335 (506)
T KOG0289|consen 296 PTSSRPH----------------------------------------EEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG 335 (506)
T ss_pred ccccccc----------------------------------------cccceeeeeccCCcEEEEecCCceEEEEEccCC
Confidence 3333322 223667777788999999999999999999999
Q ss_pred ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCC
Q 000355 1428 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APE 1506 (1620)
Q Consensus 1428 ~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spd 1506 (1620)
..+.........+ .+++.+|+ |||.++++|..||.|++||+.++..+..|.+|.++|.+|+ +.|
T Consensus 336 ~~lt~vs~~~s~v----~~ts~~fH-----------pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsEN 400 (506)
T KOG0289|consen 336 SQLTVVSDETSDV----EYTSAAFH-----------PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSEN 400 (506)
T ss_pred cEEEEEeeccccc----eeEEeeEc-----------CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccC
Confidence 9887665432222 25556654 7778999999999999999999999999999999999999 999
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCeEeecCC-CCEE--EEeecCCEEEEEeCCceEEEeccCCCCCCCcceeecccee
Q 000355 1507 DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHT-NGIS--GFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLY 1583 (1620)
Q Consensus 1507 g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~-~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~~~~g~~~~~~~kl~ 1583 (1620)
|-+||++++|+.|++||+|..+ ...++.-.. .+|. +|...|++|+.++.| |+||-..+... ..+++.
T Consensus 401 GY~Lat~add~~V~lwDLRKl~--n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~-l~Vy~~~k~~k-------~W~~~~ 470 (506)
T KOG0289|consen 401 GYWLATAADDGSVKLWDLRKLK--NFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD-LQVYICKKKTK-------SWTEIK 470 (506)
T ss_pred ceEEEEEecCCeEEEEEehhhc--ccceeeccccccceeEEEcCCCCeEEeecce-eEEEEEecccc-------cceeee
Confidence 9999999999999999999873 333333222 2455 477789999999555 44444331111 111111
Q ss_pred eecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1584 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1584 ~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. -..|.+..+.+.|.-+.+++++||.|..++++
T Consensus 471 ~---~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 471 E---LADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred h---hhhcccccceeeecccceEEeeccchhheEEe
Confidence 1 12466788999999999999999999999886
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=240.83 Aligned_cols=192 Identities=15% Similarity=0.094 Sum_probs=145.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||++.... ......+++|.+.... .......+. +|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~G~~g~v~~~~~~~----~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYT----DTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEEc----CCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 369999999999987411 1234567778776532 223334455 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 190 GLITSVIPKTP-YTLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
...|+||||++ |+|.+++.... ....++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 99999999999 59999997432 23456667788999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccc-------cccccccccccccccchHHHH
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-------~~y~~~~d~W~~G~isnfeyL 326 (1620)
++.......... .....++..|+|||++.. ..++.++|+|+.|.+. |+++
T Consensus 146 ~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~ 202 (268)
T cd05086 146 GPSRYKEDYIET---------EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL-WELF 202 (268)
T ss_pred ccccCcchhhhc---------ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH-HHHH
Confidence 873221110000 011225678999998753 3457789999999775 5554
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=241.71 Aligned_cols=190 Identities=16% Similarity=0.162 Sum_probs=145.8
Q ss_pred eceeeeeeEEEEEEEecccc------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 110 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46999999999999842211 011234568888875432 12222333 789999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-----e
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 257 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-----~ 257 (1620)
+++..+...++||||+++ +|..++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999995 78777763 3456899999999999999999999999999999999999986651 1
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHH
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.+|++|||++..... ...+.++..|||||.+. +..++.++|+|+.|++. |+++
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~el~ 203 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTL-WEIC 203 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHHH-HHHH
Confidence 389999999874321 11234677899999876 56789999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=243.67 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+... ....++..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEccc-CCCCcceeEEEEecCCC-cCHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 45799999999999999999986321 01235678999998753 2223334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 241 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 241 (1620)
++++..++..++||||++ |+|.+++.... ...+++..+..++.||+.||.|||++|++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999999999999999 59999997321 124677888999999999999999999999
Q ss_pred cCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 242 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 242 RDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+|||++.++ .+||+|||+++......... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 222 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 222 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH
Confidence 99999999999998 89999999987432111000 00111234569999999888999999999999876
Q ss_pred hHHHH
Q 000355 322 NFEYL 326 (1620)
Q Consensus 322 nfeyL 326 (1620)
|+++
T Consensus 223 -~el~ 226 (288)
T cd05050 223 -WEIF 226 (288)
T ss_pred -HHHH
Confidence 5544
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-21 Score=241.00 Aligned_cols=246 Identities=16% Similarity=0.171 Sum_probs=177.3
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC-CCeEEE--eCCcEEEEeCCCCce-EEEEeccCCccccccCCCCCcc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-SGRIAS--CDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~-~~~laS--~DgtV~IWD~~tg~~-i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
++.|++|+..+...+..+.+|.+.|.+++|+|+ +..++| .||+|+|||+.++.. ...+..
T Consensus 53 ~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~---------------- 116 (568)
T PTZ00420 53 IGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKD---------------- 116 (568)
T ss_pred eeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccccc----------------
Confidence 899999999888889999999999999999997 566644 499999999986532 111100
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCE-EEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~-lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
.+..+.-+...|++++|+|++.. +++|+.|++|++||+++++.+..+.. ...|.+
T Consensus 117 -----------------p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~S 172 (568)
T PTZ00420 117 -----------------PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSS 172 (568)
T ss_pred -----------------ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEE
Confidence 00011112233666777777765 56899999999999999987766642 234788
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE------eCCCCEEEEEeCCC----c
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA------APEDHLLVSSSLDK----T 1518 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva------spdg~~LaSgS~Dg----t 1518 (1620)
++|+ ++|.+|++++.|+.|++||+++++.+.++.+|.+.+.+.. ++++.+++|++.|+ +
T Consensus 173 lsws-----------pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~ 241 (568)
T PTZ00420 173 LKWN-----------IKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMRE 241 (568)
T ss_pred EEEC-----------CCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccE
Confidence 8875 6778999999999999999999999999999998754433 37888999988775 7
Q ss_pred EEEEECCCCCCCCCeE--eecCCCCEE-EE-eecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccc
Q 000355 1519 LRIWDLRRNWPSQPTV--FKGHTNGIS-GF-SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLS 1593 (1620)
Q Consensus 1519 I~IWDl~~~~~~~~~~--l~gH~~~V~-af-Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~ 1593 (1620)
|+|||+++.. ..+.. +..+.+.+. .+ .++|.++++|+.|+ |++|++.. +.. ..+ ... .+..
T Consensus 242 VkLWDlr~~~-~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~-----~~~----~~l---~~~-~s~~ 307 (568)
T PTZ00420 242 MKLWDLKNTT-SALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSL-----GSI----RKV---NEY-KSCS 307 (568)
T ss_pred EEEEECCCCC-CceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccC-----CcE----Eee---ccc-ccCC
Confidence 9999999632 33333 334444443 23 34588999999999 99999862 211 111 111 3556
Q ss_pred cEEEEEEecCC
Q 000355 1594 VLSSISILPFS 1604 (1620)
Q Consensus 1594 ~V~svafsPdg 1604 (1620)
++.+++|.|..
T Consensus 308 p~~g~~f~Pkr 318 (568)
T PTZ00420 308 PFRSFGFLPKQ 318 (568)
T ss_pred CccceEEcccc
Confidence 78889999864
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=237.76 Aligned_cols=191 Identities=18% Similarity=0.209 Sum_probs=154.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||++.+ ..+..+|+|.+....... .++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYW-------LEKRKVAIKTIREGAMSE---EDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEE-------eCCCeEEEEECCCCCCCH---HHHH--------HHHHHHHhCCCCCeeeEE
Confidence 4789999999999999999985 235679999987543322 2344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++......++||||+++ +|.+++.. ....+++..++.++.|++.||.|||+++++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999985 99999874 234578889999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++....... .. .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 143 d~g~~~~~~~~~~-----~~-----~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l-~el~ 195 (256)
T cd05112 143 DFGMTRFVLDDQY-----TS-----STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred CCcceeecccCcc-----cc-----cCCCccchhhcCHhHhccCCcChHHHHHHHHHHH-HHHH
Confidence 9999884321100 00 0111235679999999988899999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-23 Score=238.33 Aligned_cols=191 Identities=19% Similarity=0.156 Sum_probs=149.7
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|...... ..+..+|+|.+...... ....++. +|+++++.++||||+++++++. .
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~---~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~-~ 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKS---GKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCK-G 67 (257)
T ss_pred CccCccCceeEEEeEeeccC---CCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEc-C
Confidence 47999999999999852211 23478999998765433 2333444 8999999999999999999876 4
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 56899999998 599999983 44688999999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
......... . ......++..|+|||.+.+..++.++|+|+.|.+. |+.+
T Consensus 144 ~~~~~~~~~--~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~~~ 192 (257)
T cd05060 144 ALGAGSDYY--R------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTL-WEAF 192 (257)
T ss_pred eeecCCccc--c------cccCccccccccCHHHhcCCCCCccchHHHHHHHH-HHHH
Confidence 543211100 0 00111134579999999988999999999999665 4444
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=267.61 Aligned_cols=218 Identities=18% Similarity=0.173 Sum_probs=170.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.-++.+.||+|+||+||.|.-.-..+... -..||||.+++. ...+...+|+ +|..+|++++|||||+++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl--------~Ea~~m~~f~HpNiv~li 761 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFL--------KEALLMSKFDHPNIVSLI 761 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHH--------HHHHHHhcCCCcceeeEE
Confidence 356788999999999999998532222111 456899999774 3455666777 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|++.+....+|++|||. |||..+|+..+ ...++..+...++.||++|+.||+++++|||||...|+||+...
T Consensus 762 Gv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r-- 839 (1025)
T KOG1095|consen 762 GVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR-- 839 (1025)
T ss_pred EeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC--
Confidence 99999999999999999 59999999641 45678999999999999999999999999999999999999998
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
.+||+|||+||..-...........+ =..-|||||.+....++.++|+|+.|.+. ||.+. ++.-+|
T Consensus 840 ~VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVll-WEifs----lG~~PY 905 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVLL-WEIFS----LGATPY 905 (1025)
T ss_pred cEEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHHH-HHHHh----CCCCCC
Confidence 99999999999432211110000000 12459999999999999999999999765 55543 344456
Q ss_pred CCCcCCcccc
Q 000355 338 GDYTFHMVMP 347 (1620)
Q Consensus 338 ~dl~q~pv~p 347 (1620)
.+.++.-|+-
T Consensus 906 ~~~~n~~v~~ 915 (1025)
T KOG1095|consen 906 PSRSNFEVLL 915 (1025)
T ss_pred CCcchHHHHH
Confidence 6666655555
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=243.39 Aligned_cols=188 Identities=15% Similarity=0.109 Sum_probs=144.4
Q ss_pred ceeeeeeEEEEEEEeccccc------------------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 111 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
.||+|+||.||+|......+ .......||+|.+.... ......+. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHH--------HHHHHHh
Confidence 69999999999987432110 11223568899886432 22223344 7899999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
.++||||+++++++..++..++||||+++ +|..++.. ..+.+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999995 88888863 34567888899999999999999999999999999999999
Q ss_pred cCCCc-----eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHH
Q 000355 252 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 252 ~~~~~-----~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfey 325 (1620)
+..+. ..+|++|||+++..... . ...++..|+|||.+.+ ..++..+|+|+.|.+. |+.
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~--------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l-~el 214 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR-------E--------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTL-LEI 214 (274)
T ss_pred eccCcccCccceeeecCCccccccccc-------c--------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHH-HHH
Confidence 86531 24899999998732111 0 1125667999998765 5689999999999765 443
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-21 Score=241.02 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=176.2
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE-------------EEEecCCcceeEEEEee-CCCeEE--
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV-------------SGYYGHEEVVNDICVLS-SSGRIA-- 1331 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l-------------~~l~gH~~~V~sV~f~~-~~~~la-- 1331 (1620)
|-..|+....++|+..+++++. +..+..|+...+..+ ..+.||++.|++++|+| ++..++
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~----~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg 94 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACND----RFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTA 94 (493)
T ss_pred ceeccccccccCCCCCcEeECC----ceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEE
Confidence 4456777778888777788775 677778886554332 14679999999999999 666774
Q ss_pred EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEE
Q 000355 1332 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERL 1410 (1620)
Q Consensus 1332 S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~l 1410 (1620)
|.|++|++||+.++....... ........|... |.+++|+|++ +.+
T Consensus 95 S~DgtIkIWdi~~~~~~~~~~-----------------------~~l~~L~gH~~~----------V~~l~f~P~~~~iL 141 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNIS-----------------------DPIVHLQGHTKK----------VGIVSFHPSAMNVL 141 (493)
T ss_pred eCCCEEEEEecCCCccccccC-----------------------cceEEecCCCCc----------EEEEEeCcCCCCEE
Confidence 449999999997653211000 000011123333 4555566654 689
Q ss_pred EEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEE
Q 000355 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490 (1620)
Q Consensus 1411 asgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~ 1490 (1620)
++|+.|++|++||+++++.+..+.+|. ..|.+++|+ ++|++|++|+.||+|++||+++++.+.
T Consensus 142 aSgs~DgtVrIWDl~tg~~~~~l~~h~------~~V~sla~s-----------pdG~lLatgs~Dg~IrIwD~rsg~~v~ 204 (493)
T PTZ00421 142 ASAGADMVVNVWDVERGKAVEVIKCHS------DQITSLEWN-----------LDGSLLCTTSKDKKLNIIDPRDGTIVS 204 (493)
T ss_pred EEEeCCCEEEEEECCCCeEEEEEcCCC------CceEEEEEE-----------CCCCEEEEecCCCEEEEEECCCCcEEE
Confidence 999999999999999999888887654 458888886 567899999999999999999999999
Q ss_pred EEEccCCcEE-EEE-eCCCCEEEEEe----CCCcEEEEECCCCCCCCCeEeecCCC-CEE--EEeecCCEEEEEe-CCc-
Q 000355 1491 SWRAHDGYVT-KLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTN-GIS--GFSVWGQDVISIS-NNK- 1559 (1620)
Q Consensus 1491 ~l~gH~~~V~-sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~-~V~--afSpdg~~LaSgs-~D~- 1559 (1620)
.+.+|.+.+. .+. .+++..+++++ .|++|++||+++.. ........+.. .+. .|+++++.|++|+ .|+
T Consensus 205 tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~ 283 (493)
T PTZ00421 205 SVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-SPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGN 283 (493)
T ss_pred EEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-CceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCe
Confidence 9999987543 334 66767776654 47999999998753 23333333333 333 4889999999887 488
Q ss_pred eEEEecc
Q 000355 1560 IGLSSLS 1566 (1620)
Q Consensus 1560 I~vwdl~ 1566 (1620)
|++||+.
T Consensus 284 Iriwdl~ 290 (493)
T PTZ00421 284 IRCFELM 290 (493)
T ss_pred EEEEEee
Confidence 9999986
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-24 Score=230.15 Aligned_cols=211 Identities=16% Similarity=0.163 Sum_probs=161.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++.+.+..||.|+.|.|++++. ..+|.+.|||.+.+.. ..++.++.+ ..+.++.+. ..|+||+
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~------rs~~~iiAVK~M~rt~-Nkee~kRIL--------mDldvv~~s~dcpyIV~ 155 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRF------RSTGHIIAVKQMRRTG-NKEENKRIL--------MDLDVVLKSHDCPYIVQ 155 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEE------cccceEEEEEeecccC-CHHHHHHHH--------HhhhHHhhccCCCeeee
Confidence 34667788999999999999986 2568999999998753 334444444 677766554 4799999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
.+|+|.++..+++.||.|...++.+++.. .+.++|..+-.+..-+++||.||.+ +||||||+||+|||+|+.| ++|
T Consensus 156 c~GyFi~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--niK 232 (391)
T KOG0983|consen 156 CFGYFITNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--NIK 232 (391)
T ss_pred eeeEEeeCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--CEE
Confidence 99999999999999999987777777753 4568999999999999999999987 6999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||||++....... +..+ .. |-+.|||||.+. ...|+-..|+|+.| ++..+...|+..
T Consensus 233 lCDFGIsGrlvdSk-----Ahtr----sA---GC~~YMaPERidp~~~~kYDiRaDVWSlG-------ITlveLaTg~yP 293 (391)
T KOG0983|consen 233 LCDFGISGRLVDSK-----AHTR----SA---GCAAYMAPERIDPPDKPKYDIRADVWSLG-------ITLVELATGQYP 293 (391)
T ss_pred eecccccceeeccc-----cccc----cc---CCccccCccccCCCCCCccchhhhhhhhc-------cchhhhhcccCC
Confidence 99999998654321 1111 22 345799999875 45789999999999 445555556543
Q ss_pred CCC--cCCcccceee
Q 000355 338 GDY--TFHMVMPWVI 350 (1620)
Q Consensus 338 ~dl--~q~pv~pwv~ 350 (1620)
... +.+-++--|+
T Consensus 294 y~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCccHHHHHHHH
Confidence 333 3334444444
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-21 Score=200.03 Aligned_cols=276 Identities=19% Similarity=0.257 Sum_probs=217.5
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-------C------c---eeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-------A------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~-------g------~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
+|.|.|.+ .|.||..++.|+.... + . ..+.-+.|.++|.|++|||+|+++++||.
T Consensus 39 ~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn---- 109 (350)
T KOG0641|consen 39 AFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN---- 109 (350)
T ss_pred EecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC----
Confidence 48999987 8999999999876521 1 0 12344679999999999999999999998
Q ss_pred CcEEEEEeCCCCeEE-----EEEecCCcceeEEEEeeC---CC-eEEEe---CCcEEEEeCCCCceEEEEeccCCccccc
Q 000355 1294 KGTVQKWELTRINCV-----SGYYGHEEVVNDICVLSS---SG-RIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1361 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l-----~~l~gH~~~V~sV~f~~~---~~-~laS~---DgtV~IWD~~tg~~i~~l~~~~~~~~~~ 1361 (1620)
|++|++--.....|. ..|.-|.+.|..++|..+ ++ .++|. |..|.+-|..+|+..+.+.+|.
T Consensus 110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sght------ 183 (350)
T KOG0641|consen 110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHT------ 183 (350)
T ss_pred CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCc------
Confidence 899999766544432 346779999999999653 33 34554 8889999999999888777653
Q ss_pred cCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccc
Q 000355 1362 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1441 (1620)
Q Consensus 1362 ~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~ 1441 (1620)
+.|.++ ++-+|-.+++|+.|.+||+||++-..++.++...-...+
T Consensus 184 ------------------------ghilal-----------yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 184 ------------------------GHILAL-----------YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG 228 (350)
T ss_pred ------------------------ccEEEE-----------EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence 223332 222466899999999999999999999988764322212
Q ss_pred -cCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcE
Q 000355 1442 -FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTL 1519 (1620)
Q Consensus 1442 -~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI 1519 (1620)
-++.|.+||.. |.|.++++|..|..+.+||+|.|..++.+..|+..|++|. +|...+|++||.|..|
T Consensus 229 lessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~i 297 (350)
T KOG0641|consen 229 LESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI 297 (350)
T ss_pred cccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence 34568888875 6778999999999999999999999999999999999999 9999999999999999
Q ss_pred EEEECCCCCC--CCCeEeecCCCCEE-E-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1520 RIWDLRRNWP--SQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1520 ~IWDl~~~~~--~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
++-|++.... ..+.....|.+.+. + |.|..--+++.|.|+ +.+|.+.
T Consensus 298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 9999986422 23345567887665 4 889888899999999 9999863
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-23 Score=238.31 Aligned_cols=186 Identities=18% Similarity=0.208 Sum_probs=152.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++. ..++.+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356789999986421 122333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..+ ..++||||++ ++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998754 5799999998 4999999865455678999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++...... . ....+..|+|||.+.+..++...|+|+.|++. |+++
T Consensus 142 ~Dfg~~~~~~~~~-------~-------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l-~el~ 191 (254)
T cd05083 142 SDFGLARVGSMGV-------D-------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLL-WEVF 191 (254)
T ss_pred CCCccceeccccC-------C-------CCCCCceecCHHHhccCCcCchhhHHHHHHHH-HHHH
Confidence 9999998432110 0 01124569999999888999999999999776 5544
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=220.37 Aligned_cols=285 Identities=12% Similarity=0.149 Sum_probs=216.8
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-------------C------ceeEEeecccCcEEEEE
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-------------A------SILSSIRAHHGALRSVA 1276 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-------------g------~~l~tl~gH~~~V~sva 1276 (1620)
...+..|+..+-+ ||+||.+ +||||.|-+|+|.|++ | .++++|-.|.+.|+++.
T Consensus 105 t~ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred eEEEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccccee
Confidence 4455668887764 9999997 9999999999999965 1 26789999999999999
Q ss_pred EccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEe--cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEe
Q 000355 1277 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1352 (1620)
Q Consensus 1277 fspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~--gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~ 1352 (1620)
|+|.+++|+||+. |++|+++|.......+.++ .-...|.++.|+|.|.++ ++.--++++||++|-+|...-.
T Consensus 180 FHPre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 180 FHPRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred ecchhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 9999999999998 9999999987654333222 245789999999999998 3446799999999988754332
Q ss_pred ccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE
Q 000355 1353 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL 1432 (1620)
Q Consensus 1353 ~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~ 1432 (1620)
.. ..|++ .++++.+++.|+..++|+.||.|++||--+++|+.+
T Consensus 256 Pd---------------------------~qht~----------ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t 298 (430)
T KOG0640|consen 256 PD---------------------------DQHTG----------AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT 298 (430)
T ss_pred cc---------------------------ccccc----------ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence 11 01222 267777888899999999999999999999999998
Q ss_pred eeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC--Cc----EEEEEeCC
Q 000355 1433 WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD--GY----VTKLAAPE 1506 (1620)
Q Consensus 1433 l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~--~~----V~svaspd 1506 (1620)
+....+. +.|.+..|. .+|++|.+.+.|..+++|.+.||.++....|-. +. -.++-...
T Consensus 299 ~~~AH~g----sevcSa~Ft-----------kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNht 363 (430)
T KOG0640|consen 299 IGNAHGG----SEVCSAVFT-----------KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHT 363 (430)
T ss_pred HHhhcCC----ceeeeEEEc-----------cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCc
Confidence 8643331 234444443 567899999999999999999999999887542 11 11222223
Q ss_pred CCEEEEEe-CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1507 DHLLVSSS-LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1507 g~~LaSgS-~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
..+++.-. ..+.+..||.++..... ..--||++.|.. -||.+.-+++||+|. +++|-
T Consensus 364 EdyVl~pDEas~slcsWdaRtadr~~-l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 364 EDYVLFPDEASNSLCSWDARTADRVA-LLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred cceEEccccccCceeeccccchhhhh-hcccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 44554433 35679999999974222 234589999986 688999999999999 99996
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-23 Score=241.94 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=155.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh--hHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.|++.+.||+|+||.||+|++... ..+|..+|+|.+........ ....+. +|+++++.+ +||||++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~---~~~g~~~aiK~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~i~~ 69 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSG---HDSGKLYAMKVLKKATIVQKAKTTEHTR--------TERQVLEHIRQSPFLVT 69 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccC---CCCCceEEEEEeehhhhhhcchHHHHHH--------HHHHHHHhcccCCChhc
Confidence 488899999999999999986321 24688999999875322111 112222 899999999 5899999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.|..+..+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~k 145 (290)
T cd05613 70 LHYAFQTDTKLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVV 145 (290)
T ss_pred eeeEeecCCeEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999995 99999973 45688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc--cccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~--~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........ . .....++..|+|||.+.+ ..++..+|+|+.|.+. |+.++
T Consensus 146 l~dfg~~~~~~~~~~~---~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l-~~ll~ 203 (290)
T cd05613 146 LTDFGLSKEFHEDEVE---R-------AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLM-YELLT 203 (290)
T ss_pred EeeCccceeccccccc---c-------cccccCCcccCChhhccCCCCCCCccccHHHHHHHH-HHHhc
Confidence 9999999853211100 0 112236788999998864 3577899999999775 44443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-23 Score=239.47 Aligned_cols=198 Identities=17% Similarity=0.174 Sum_probs=153.4
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|..... ..+++.+|||.+...........++. +|+++++.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSE---DGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEeecc---CCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 56788999999999999986322 24578999999976544444445555 89999999999999999998
Q ss_pred EEeCC------EEEEEEeCCC-CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 186 LKTSG------LITSVIPKTP-YTLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 186 ~~~~~------~~~lV~E~~~-g~L~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+...+ ..++++||+. |+|.+++.... ...++...++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86542 3478899998 59988875321 2247888899999999999999999999999999999999998
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+ .+||+|||+++......... .. ....+++.|++||.+.+..++..+|+|+.|++. |+.+
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~-~~--------~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il-~el~ 209 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYR-QG--------CASKLPVKWLALESLADNVYTTHSDVWAFGVTM-WEIM 209 (273)
T ss_pred C--CEEECcccccccccCCccee-cC--------CCccCchhhcCHhHHhcCccchhhhhHHHHHHH-HHHh
Confidence 8 89999999998432111000 00 011234679999999998999999999999776 4444
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.9e-23 Score=236.05 Aligned_cols=197 Identities=21% Similarity=0.188 Sum_probs=156.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
+++.+.||+|+||.||+|.+....+ ..+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 3567899999999999999733211 2358899999965422 22333444 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+.+.+..+++|||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999985 999999853333389999999999999999999999999999999999999999 8999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+++......... .. .-.++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 148 g~~~~~~~~~~~~--~~--------~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~-~~l~ 198 (258)
T smart00219 148 GLSRDLYDDDYYK--KK--------GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL-WEIF 198 (258)
T ss_pred CCceecccccccc--cc--------cCCCcccccChHHhccCCCCcchhHHHHHHHH-HHHH
Confidence 9998543221110 00 01146789999999888899999999999776 4443
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.6e-23 Score=235.44 Aligned_cols=189 Identities=16% Similarity=0.133 Sum_probs=151.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|.+ .+++.+|+|.+...... .....+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~-------~~~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVL-------KGNTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEE-------eCCCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 4799999999999986 23788999998764322 2333444 899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||+++ +|.+++... ...++...+..++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999985 999999742 34578888999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
........ ... ..-..+..|+|||.+.+..++..+|+|+.|.+. |++++
T Consensus 142 ~~~~~~~~---~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~-~~l~t 190 (251)
T cd05041 142 EEEGGIYT---VSD------GLKQIPIKWTAPEALNYGRYTSESDVWSYGILL-WETFS 190 (251)
T ss_pred cccCCcce---ecc------ccCcceeccCChHhhccCCCCcchhHHHHHHHH-HHHHh
Confidence 43211000 000 001124569999999888999999999999776 55554
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-23 Score=240.09 Aligned_cols=196 Identities=17% Similarity=0.129 Sum_probs=155.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||+|+..... ...+..+|+|.+...... .....+. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~~ 72 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLG--DNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKYK 72 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCC--CCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheEE
Confidence 46888899999999999999853221 245789999999764332 2333444 899999999999999999
Q ss_pred eEEEe--CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~--~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.. ....++||||+++ +|.+++... ...++...+..++.|++.||+|||++||+||||||+|||++.++ .+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~ 149 (284)
T cd05038 73 GVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LVK 149 (284)
T ss_pred eeeecCCCCceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEE
Confidence 99887 5589999999984 999999743 33588899999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|+|||+++............ ....++..|+|||.+.+..++..+|+|+.|++.
T Consensus 150 l~dfg~~~~~~~~~~~~~~~--------~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l 202 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYYVK--------EPGESPIFWYAPECLRTSKFSSASDVWSFGVTL 202 (284)
T ss_pred EcccccccccccCCcceecc--------CCCCCcccccCcHHHccCCCCcccchHHHhhhh
Confidence 99999998543111110000 011234569999999888999999999999665
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.2e-23 Score=236.76 Aligned_cols=194 Identities=19% Similarity=0.195 Sum_probs=148.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEE-e
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~-~ 188 (1620)
+.||+|+||.||+|.+... ......+|+|.+.... .......+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~~~---~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDS---DGQKIHCAVKSLNRIT-DLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEecC---CCceEEEEEEecCccC-CHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 4689999999999985221 1345789999985422 222333444 8999999999999999999775 4
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++..++||||+. ++|.+++... ....+...+..++.||+.||.|||+++|+||||||+|||++.++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 556899999998 5999999742 34457778888999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+............ .....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 146 ~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 196 (262)
T cd05058 146 RDIYDKEYYSVHN-------HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELM 196 (262)
T ss_pred ccccCCcceeecc-------cccCcCCccccChhHhccCccchHHHHHHHHHHH-HHHH
Confidence 8432211000000 1122356679999999888999999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-23 Score=239.85 Aligned_cols=189 Identities=18% Similarity=0.186 Sum_probs=147.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+... .....+|+|.++.. ........+. +|+++++++ +||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~----~~~~~~~~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~~~ 67 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIINLLGACEH 67 (270)
T ss_pred CcCCCCCCceEEEEEEcCC----CCeeEEEEEEcccc-CCHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEEec
Confidence 3699999999999986211 11235688887642 2222233344 899999999 79999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 189 SGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
.+.+|+||||++ |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~ 147 (270)
T cd05047 68 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 147 (270)
T ss_pred CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC
Confidence 999999999998 59999997422 124788899999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
++ .+||+|||+++...... .. .....+..|+|||++....++.++|+|+.|.+. |+++
T Consensus 148 ~~--~~kl~dfgl~~~~~~~~------~~------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~el~ 205 (270)
T cd05047 148 NY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIV 205 (270)
T ss_pred CC--eEEECCCCCccccchhh------hc------cCCCCccccCChHHHccCCCCchhhHHHHHHHH-HHHH
Confidence 98 89999999986321100 00 011134569999999988999999999999776 5554
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=237.76 Aligned_cols=198 Identities=17% Similarity=0.184 Sum_probs=154.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+||.||+|.+.-.. .....+|+|...... .....+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 72 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPE---NEKIAVAVKTCKNCT-SPSVREKFL--------QEAYIMRQFDHPHIVKL 72 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCC---CCCcceEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCchhce
Confidence 356889999999999999999852211 234568999886532 223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+ +..++||||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 73 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l 148 (270)
T cd05056 73 IGVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKL 148 (270)
T ss_pred eEEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEE
Confidence 999875 45789999998 5999999742 33578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... . ..-.++..|+|||.+....++..+|+|+.|.+. |+.++
T Consensus 149 ~d~g~~~~~~~~~~~~--~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~ 203 (270)
T cd05056 149 GDFGLSRYLEDESYYK--A--------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILM 203 (270)
T ss_pred ccCceeeeccccccee--c--------CCCCccccccChhhhccCCCCchhhhHHHHHHH-HHHHH
Confidence 9999998543221000 0 011134579999999888899999999999776 55553
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-23 Score=241.29 Aligned_cols=191 Identities=16% Similarity=0.131 Sum_probs=146.9
Q ss_pred eceeeeeeEEEEEEEecccccc-cccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+...... ......+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999986332110 123456888887542 122223344 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc------eEEEE
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW------SWLYI 261 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~------~~lKL 261 (1620)
++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. ..+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999984 999999742 345788888999999999999999999999999999999987762 13799
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||++...... ....++..|+|||++.+ ..++..+|+|+.|.+. |+++.
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~~l~~ 200 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL-WEIFS 200 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH-HHHHc
Confidence 999998732210 11225678999998876 4578899999999776 55543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-23 Score=241.40 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred ccCcEE---EEEEc-cCCCEEEEeccCCCCCcEEEEEeCCCC------eEEEEEecCCcceeEEEEeeCCCeE--EEeCC
Q 000355 1268 HHGALR---SVAVG-QDECTVFTAGIGPGFKGTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1335 (1620)
Q Consensus 1268 H~~~V~---svafs-pdg~~LaSgs~d~~~DgtVrLWdl~tg------~~l~~l~gH~~~V~sV~f~~~~~~l--aS~Dg 1335 (1620)
|...|. ++..+ |++++|+|||. ||.|++|+.... .++..++.|.+.|+++....++..+ +|.|-
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGR----Dg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt 95 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGR----DGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT 95 (735)
T ss_pred ccccccchhhccccCCCCceEEecCC----CceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc
Confidence 444555 44444 45678999998 999999997532 2578889999999999988888666 66699
Q ss_pred cEEEEeCCCC--ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEE-ecCCCEEEE
Q 000355 1336 TLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH-IECVERLVV 1412 (1620)
Q Consensus 1336 tV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~-s~dg~~las 1412 (1620)
||++|+...+ -|+.++..| .++|.|+++ .++...+|+
T Consensus 96 TVK~W~~~~~~~~c~stir~H----------------------------------------~DYVkcla~~ak~~~lvaS 135 (735)
T KOG0308|consen 96 TVKVWNAHKDNTFCMSTIRTH----------------------------------------KDYVKCLAYIAKNNELVAS 135 (735)
T ss_pred eEEEeecccCcchhHhhhhcc----------------------------------------cchheeeeecccCceeEEe
Confidence 9999998766 344444433 245778887 677889999
Q ss_pred EECCCcEEEEECCCC--ceeEEeeCCC---cccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc
Q 000355 1413 GIGNGSLRFIDINQG--QKLHLWRGEP---TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1487 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg--~~l~~l~~~~---~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~ 1487 (1620)
|+-|+.|.+||+.+| +.+.++.... ...++...|.+++.. +.|..|++|+..+.+++||.++++
T Consensus 136 gGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N-----------~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 136 GGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN-----------QTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred cCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC-----------CcceEEEecCcccceEEecccccc
Confidence 999999999999988 4444443211 111344556666653 556799999999999999999999
Q ss_pred EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEE
Q 000355 1488 VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLS 1563 (1620)
Q Consensus 1488 ~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vw 1563 (1620)
.+..++||..-|..+. ++||+.++|+|.||+|++||+... +++.++..|.++|.+ .+++=+.+.+|+.|+ |..-
T Consensus 205 kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T 282 (735)
T KOG0308|consen 205 KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT 282 (735)
T ss_pred ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec
Confidence 9999999999999999 999999999999999999999877 788899999999997 566678899999999 9999
Q ss_pred eccC
Q 000355 1564 SLSK 1567 (1620)
Q Consensus 1564 dl~~ 1567 (1620)
|+..
T Consensus 283 dl~n 286 (735)
T KOG0308|consen 283 DLRN 286 (735)
T ss_pred ccCC
Confidence 9873
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=239.01 Aligned_cols=201 Identities=16% Similarity=0.119 Sum_probs=157.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ...+..|++|.+... ........+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~--~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEK--PGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCC--CCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 468999999999999999999963211 123678999998643 2223333344 89999999999999999
Q ss_pred eeEEEe-CCEEEEEEeCCC-CCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKT-SGLITSVIPKTP-YTLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~-~~~~~lV~E~~~-g~L~~~l~~~~~------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++.. +...++++||++ ++|.+++..... ..+++..+..++.|++.||.|||+++|+||||||+|||++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998766 467899999998 599999875322 458899999999999999999999999999999999999998
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+ .+||+|||+++.......... .....++..|+|||++.+..++.++|+|+.|++. |+.+
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l-~el~ 213 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHCL---------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLL-WELM 213 (280)
T ss_pred C--cEEECCCCCcccccCCceEEe---------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH-HHHh
Confidence 8 899999999984322111000 0112245679999999988999999999999765 4444
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-22 Score=227.70 Aligned_cols=307 Identities=17% Similarity=0.223 Sum_probs=212.4
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe----EEEEE-ecCCcceeEEEEeeCCCe
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN----CVSGY-YGHEEVVNDICVLSSSGR 1329 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~----~l~~l-~gH~~~V~sV~f~~~~~~ 1329 (1620)
..+.+..-..+++|+..|.++++.|.|..++|||- |.+|+.||..... ..+.+ ..-...|+++.|++.+..
T Consensus 153 ~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~----Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~ 228 (641)
T KOG0772|consen 153 KLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSL----DYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQ 228 (641)
T ss_pred hcCCccceEeccCCceEEEEeeecCCCceeeeccc----cceEEEEecccccccchhhhccCcccccccceeeecCCCCe
Confidence 34456677789999999999999999999999996 9999999986432 11222 234568999999999888
Q ss_pred E--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC
Q 000355 1330 I--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV 1407 (1620)
Q Consensus 1330 l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg 1407 (1620)
+ +|+....+|+|- .|..+..+...... -..+.+-.+|...+.+.+|+|. +.
T Consensus 229 iLvvsg~aqakl~DR-dG~~~~e~~KGDQY-----------------I~Dm~nTKGHia~lt~g~whP~---------~k 281 (641)
T KOG0772|consen 229 ILVVSGSAQAKLLDR-DGFEIVEFSKGDQY-----------------IRDMYNTKGHIAELTCGCWHPD---------NK 281 (641)
T ss_pred EEEEecCcceeEEcc-CCceeeeeeccchh-----------------hhhhhccCCceeeeeccccccC---------cc
Confidence 7 788899999994 46554444321100 0122333345555555555543 35
Q ss_pred CEEEEEECCCcEEEEECCCCc-eeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC
Q 000355 1408 ERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG 1486 (1620)
Q Consensus 1408 ~~lasgs~DgtVrlwDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg 1486 (1620)
..+++++.||++|+||+...+ .+..++..... +-...+++++ |+++|++||+|+.||.|.+||.++.
T Consensus 282 ~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~-g~Rv~~tsC~-----------~nrdg~~iAagc~DGSIQ~W~~~~~ 349 (641)
T KOG0772|consen 282 EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG-GKRVPVTSCA-----------WNRDGKLIAAGCLDGSIQIWDKGSR 349 (641)
T ss_pred cceEEecCCCcEEEEecCCchhheeEEeeccCC-CcccCceeee-----------cCCCcchhhhcccCCceeeeecCCc
Confidence 678999999999999997654 23334322211 1122244444 4478899999999999999998654
Q ss_pred c--E-EEEEEccCC--cEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC----CEEEEeecCCEEEEEe
Q 000355 1487 N--V-IASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN----GISGFSVWGQDVISIS 1556 (1620)
Q Consensus 1487 ~--~-i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~----~V~afSpdg~~LaSgs 1556 (1620)
. + ...-++|.. .|+||. ++||++|+|=|.|+++++||+++.+ +++.+..|-.. .=.||||+.+++++|+
T Consensus 350 ~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-kpL~~~tgL~t~~~~tdc~FSPd~kli~TGt 428 (641)
T KOG0772|consen 350 TVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-KPLNVRTGLPTPFPGTDCCFSPDDKLILTGT 428 (641)
T ss_pred ccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-cchhhhcCCCccCCCCccccCCCceEEEecc
Confidence 3 2 233358877 899999 9999999999999999999999864 44554444322 1226999999999995
Q ss_pred C------Cc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1557 N------NK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1557 ~------D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. -+ +.+||-. ....++.+.- ....|..+.|+|--..+.+|+.||+++|+
T Consensus 429 S~~~~~~~g~L~f~d~~-----------t~d~v~ki~i---~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 429 SAPNGMTAGTLFFFDRM-----------TLDTVYKIDI---STASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cccCCCCCceEEEEecc-----------ceeeEEEecC---CCceEEEEeecchhhheeeecCCCceEEE
Confidence 2 23 7777743 1112222211 23458889999998888889999999985
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-23 Score=243.13 Aligned_cols=200 Identities=17% Similarity=0.165 Sum_probs=153.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+..+.||+|+||.||+|.+..... .....+|+|.+..... .....++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~niv~~ 74 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGE--TVKIPVAIKILNETTG-PKANVEFM--------DEALIMASMDHPHLVRL 74 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCC--cceeeEEEEeccccCC-HHHHHHHH--------HHHHHHHhCCCCCcccE
Confidence 4578899999999999999998632111 1124678998865322 22222344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++... ..++++||++ |+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~-~~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~--~~kL 150 (303)
T cd05110 75 LGVCLSP-TIQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKI 150 (303)
T ss_pred EEEEcCC-CceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--ceEE
Confidence 9998754 4678999999 699999874 234578889999999999999999999999999999999999888 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++.
T Consensus 151 ~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l-~el~t 206 (303)
T cd05110 151 TDFGLARLLEGDEKEYN---------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI-WELMT 206 (303)
T ss_pred ccccccccccCcccccc---------cCCCccccccCCHHHhccCCCChHHHHHHHHHHH-HHHHh
Confidence 99999985432111000 0112245679999999989999999999999665 55443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=232.95 Aligned_cols=333 Identities=16% Similarity=0.188 Sum_probs=230.9
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC--C--------------------ceeE----------
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A--------------------SILS---------- 1263 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~--g--------------------~~l~---------- 1263 (1620)
...+.||+|||.+ |+.-+. +..++||+|.|..||||.+. + ..+.
T Consensus 184 v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 184 VAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred EEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 4568899999987 443332 24569999999999999965 3 1121
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC--e-----EEEEEecCCcceeEEEEeeCCCeE-EEe-C
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--N-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-D 1334 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg--~-----~l~~l~gH~~~V~sV~f~~~~~~l-aS~-D 1334 (1620)
.+.||.+.|.++.|+|.+..|+|+|+ |+++.+|...+. - ++....|..+.-.++-|++++..+ +.+ -
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASa----DksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~ 337 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASA----DKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRT 337 (764)
T ss_pred hhcCcccceEEEEEccchhhheeccc----CcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEeccc
Confidence 23399999999999999999999998 999999987543 2 233344556678899999999877 433 8
Q ss_pred CcEEEEeCCCC-ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1335 GTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1335 gtV~IWD~~tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
|..++|..... ...... ...+|.+.| +.++|.|.|++++++
T Consensus 338 Gg~hlWkt~d~~~w~~~~----------------------------~iSGH~~~V----------~dv~W~psGeflLsv 379 (764)
T KOG1063|consen 338 GGFHLWKTKDKTFWTQEP----------------------------VISGHVDGV----------KDVDWDPSGEFLLSV 379 (764)
T ss_pred CcEEEEeccCccceeecc----------------------------ccccccccc----------eeeeecCCCCEEEEe
Confidence 99999983321 111110 011233444 455555669999999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECC---------
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR--------- 1484 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~--------- 1484 (1620)
+.|.|-|++-.- |+... |..-..+.-|.--.+|++|.++ ...+++|.+..-+|+|+..
T Consensus 380 s~DQTTRlFa~w-g~q~~-wHEiaRPQiHGyDl~c~~~vn~-----------~~~FVSgAdEKVlRvF~aPk~fv~~l~~ 446 (764)
T KOG1063|consen 380 SLDQTTRLFARW-GRQQE-WHEIARPQIHGYDLTCLSFVNE-----------DLQFVSGADEKVLRVFEAPKSFVKSLMA 446 (764)
T ss_pred ccccceeeeccc-ccccc-eeeecccccccccceeeehccC-----------CceeeecccceeeeeecCcHHHHHHHHH
Confidence 999999998654 22111 2111111123444566665432 1234455555555555431
Q ss_pred ----------------------------------CCc---------------------------------EEEEEEccCC
Q 000355 1485 ----------------------------------SGN---------------------------------VIASWRAHDG 1497 (1620)
Q Consensus 1485 ----------------------------------tg~---------------------------------~i~~l~gH~~ 1497 (1620)
+|. .+.++-||..
T Consensus 447 i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGy 526 (764)
T KOG1063|consen 447 ICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGY 526 (764)
T ss_pred HhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCce
Confidence 111 1233458999
Q ss_pred cEEEEE-eCCCCEEEEEeCCC-----cEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1498 YVTKLA-APEDHLLVSSSLDK-----TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1498 ~V~sva-spdg~~LaSgS~Dg-----tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.|.+++ +|+|+++||++... .|++|+..+- .+...+.+|+-.|+ .|||||++|+++|.|+ +.+|.....
T Consensus 527 Ev~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~ 604 (764)
T KOG1063|consen 527 EVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQED 604 (764)
T ss_pred eEEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecc
Confidence 999999 99999999998654 4899999886 55668999999999 5999999999999999 999997521
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.....+ .+....|...|++++|+||++.|||+|.|.+|++|
T Consensus 605 --~~~e~~--------fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW 645 (764)
T KOG1063|consen 605 --IKDEFR--------FACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW 645 (764)
T ss_pred --cchhhh--------hccccccceEEEEcccCcccceeEEecCCceEEEE
Confidence 111111 11123699999999999999999999999999999
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=212.85 Aligned_cols=266 Identities=15% Similarity=0.239 Sum_probs=199.3
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC-CeEE-EEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeC
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCV-SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1342 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t-g~~l-~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~ 1342 (1620)
...+.|.+++|||....++++|. ||++||+|++.. |..+ +....|.++|.+++|+.+|..+ +++|+.+++||+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~S---WD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGS---WDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred CcccchheeEeccccCceEEecc---cCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 45788999999997666776664 899999999976 3333 3345699999999999999888 677999999999
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC--CEEEEEECCCcEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV--ERLVVGIGNGSLR 1420 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg--~~lasgs~DgtVr 1420 (1620)
.+|+..+ +..| .++|..+.| -+.. ..|++||.|++||
T Consensus 102 ~S~Q~~~-v~~H------------------------------d~pvkt~~w----------v~~~~~~cl~TGSWDKTlK 140 (347)
T KOG0647|consen 102 ASGQVSQ-VAAH------------------------------DAPVKTCHW----------VPGMNYQCLVTGSWDKTLK 140 (347)
T ss_pred cCCCeee-eeec------------------------------ccceeEEEE----------ecCCCcceeEeccccccee
Confidence 9996543 3222 333444443 3333 4899999999999
Q ss_pred EEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEE-EEEE-ccCCc
Q 000355 1421 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI-ASWR-AHDGY 1498 (1620)
Q Consensus 1421 lwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i-~~l~-gH~~~ 1498 (1620)
+||.|...++.++.- +..+.+...- ..+++++..+..|.+|+++.+... +..+ .-.-.
T Consensus 141 fWD~R~~~pv~t~~L-------PeRvYa~Dv~-------------~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q 200 (347)
T KOG0647|consen 141 FWDTRSSNPVATLQL-------PERVYAADVL-------------YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQ 200 (347)
T ss_pred ecccCCCCeeeeeec-------cceeeehhcc-------------CceeEEEecCCcEEEEEcCCCcchhhhhcCcccce
Confidence 999999988887763 4445544321 147888999999999999866422 1111 12345
Q ss_pred EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC-----C-EE-----EEeecCCEEEEEeCCc-eEEEec
Q 000355 1499 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN-----G-IS-----GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1499 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~-----~-V~-----afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
++||+ ..|....+-||-+|.+.|..+..+.++.-++++.|+. . |. +|.|.-..|+|++.|| ..+||-
T Consensus 201 ~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 201 TRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDK 280 (347)
T ss_pred eeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecc
Confidence 88999 8888778999999999999998875566789999974 2 43 4999999999999999 999995
Q ss_pred cCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEE
Q 000355 1566 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1610 (1620)
Q Consensus 1566 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg 1610 (1620)
.. .+++... ..|..+|++++|+.+|.+||-+
T Consensus 281 da-----------r~kLk~s---~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 281 DA-----------RTKLKTS---ETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred hh-----------hhhhhcc---CcCCCccceeEecCCCCEEEEE
Confidence 41 1233322 2478899999999999999865
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=234.32 Aligned_cols=188 Identities=16% Similarity=0.121 Sum_probs=145.0
Q ss_pred eceeeeeeEEEEEEEecccccc----cccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 110 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+++.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4799999999999997332100 111245777876543211 33444 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-----eEE
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 259 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-----~~l 259 (1620)
+.. +..++||||++ |+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 77899999999 5999999843 226788899999999999999999999999999999999987652 269
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc--ccccccccccccccchHHHH
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~--~y~~~~d~W~~G~isnfeyL 326 (1620)
||+|||+++..... ....++..|+|||++.+. .++.++|+|+.|.+. |+.+
T Consensus 148 kl~Dfg~a~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~-~~l~ 200 (259)
T cd05037 148 KLSDPGIPITVLSR---------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTL-LEIC 200 (259)
T ss_pred EeCCCCcccccccc---------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHH-HHHH
Confidence 99999999853210 011245679999998876 789999999999765 4443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-20 Score=227.15 Aligned_cols=349 Identities=19% Similarity=0.210 Sum_probs=248.6
Q ss_pred eec-cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC
Q 000355 1228 FWF-PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1305 (1620)
Q Consensus 1228 V~~-~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg 1305 (1620)
|.+ ++|..+. .-++.|+.+|.+.+|+++ ++.+.+++++...|+++.=+|-=..+|.|.. ||+|.+++++.+
T Consensus 162 Ital~HP~TYL---NKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~----~G~ViifNlK~d 234 (910)
T KOG1539|consen 162 ITALLHPSTYL---NKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLE----NGTVIIFNLKFD 234 (910)
T ss_pred eeeEecchhhe---eeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEecc----CceEEEEEcccC
Confidence 665 7788776 228899999999999999 8999999999999999999999889999998 899999999999
Q ss_pred eEEEEEecCCcceeEEEEeeCCCeE-EEe--CCcEEEEeCCCCceEEEEe-ccCCc-cccccCCCCCccccc--cccccc
Q 000355 1306 NCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFA-EQSMD-SLHGGSPSSSISKIN--TDQVGM 1378 (1620)
Q Consensus 1306 ~~l~~l~gH~~~V~sV~f~~~~~~l-aS~--DgtV~IWD~~tg~~i~~l~-~~~~~-~~~~~s~s~~~~~~~--~~~~~~ 1378 (1620)
+.+.+|+.-.+.|++++|..||.-+ +++ .|.+.+||++..+.+.... .|... .....-+..++.... +....+
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~ 314 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV 314 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence 9999999435999999999888876 555 6899999999887776654 23111 001001111111100 001111
Q ss_pred c-------------cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC-------c----------
Q 000355 1379 L-------------NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-------Q---------- 1428 (1620)
Q Consensus 1379 ~-------------~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg-------~---------- 1428 (1620)
+ ...+|+.+-.++.|.+ .+|..+.+++.|++.+.+++... +
T Consensus 315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~---------~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~ 385 (910)
T KOG1539|consen 315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYG---------SQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKV 385 (910)
T ss_pred EEeeCCCCcchheeeccCCCCCchheeeec---------cCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccc
Confidence 1 1123444443444432 35667777777777777665321 1
Q ss_pred ------------------------------------------------e-eEEeeCCCcccccCCccceEeeeCCCcccc
Q 000355 1429 ------------------------------------------------K-LHLWRGEPTELGFPSLVSAICACGSEKMQA 1459 (1620)
Q Consensus 1429 ------------------------------------------------~-l~~l~~~~~~v~~~~~V~sva~~~~~~~~~ 1459 (1620)
. -+.+....- -.....+++||
T Consensus 386 ~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~-~~~~~~~~av~--------- 455 (910)
T KOG1539|consen 386 NVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRF-KKDDINATAVC--------- 455 (910)
T ss_pred cccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccc-cccCcceEEEE---------
Confidence 0 000000000 00011233333
Q ss_pred CcccCCCCEEEEEecCCcEEEEECCCCcEEEEE---EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC------
Q 000355 1460 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW---RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP------ 1529 (1620)
Q Consensus 1460 ~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l---~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~------ 1529 (1620)
.++.|++.+.|++.|+|-+|++.+|-...++ ..|+++|+.++ ..-++.++|++.||.++.||..+...
T Consensus 456 --vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l 533 (910)
T KOG1539|consen 456 --VSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL 533 (910)
T ss_pred --EeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc
Confidence 3467899999999999999999999988888 58999999999 66678999999999999999876421
Q ss_pred ---------------------------------CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1530 ---------------------------------SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1530 ---------------------------------~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
+.+..+.||++.|++ |||||++|++++.|+ |++||+.. +
T Consensus 534 ~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt-----~ 608 (910)
T KOG1539|consen 534 GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT-----G 608 (910)
T ss_pred CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC-----c
Confidence 122456789999994 999999999999999 99999862 2
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCC-CcEEEc
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED-GYLRLC 1619 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~D-G~IrlW 1619 (1620)
.. +-. -.-..+..+++|+|+|.+|||...| .-|.+|
T Consensus 609 ~l------ID~----~~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 609 TL------IDG----LLVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred ce------eee----EecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 21 100 1245678999999999999999988 668888
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-21 Score=210.51 Aligned_cols=262 Identities=16% Similarity=0.243 Sum_probs=199.6
Q ss_pred Ccee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCCC--c-eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEE
Q 000355 1226 PWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIKA--S-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1300 (1620)
Q Consensus 1226 ~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~g--~-~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLW 1300 (1620)
|.|. +|||... .+++.||.|++||+|++.. . .-+....|.++|.+++|+.||..+++|+. |+.+++|
T Consensus 28 DsIS~l~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~w 99 (347)
T KOG0647|consen 28 DSISALAFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLW 99 (347)
T ss_pred cchheeEeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEE
Confidence 4444 4888222 3488999999999999872 3 22455679999999999999999999998 9999999
Q ss_pred eCCCCeEEEEEecCCcceeEEEEeeCCC--eE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1301 ELTRINCVSGYYGHEEVVNDICVLSSSG--RI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1301 dl~tg~~l~~l~gH~~~V~sV~f~~~~~--~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
|+.+++ +..+..|.++|.++.|.+... .| +|+|+|||.||++....+.++.-+.
T Consensus 100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe--------------------- 157 (347)
T KOG0647|consen 100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE--------------------- 157 (347)
T ss_pred EccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc---------------------
Confidence 999995 456778999999999988766 44 7779999999999888887776432
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCc
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1456 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~ 1456 (1620)
.+.+... -...++++..+..|.+|+++.+... ++.+.... .-.++||+...
T Consensus 158 ----------RvYa~Dv------------~~pm~vVata~r~i~vynL~n~~te--~k~~~SpL--k~Q~R~va~f~--- 208 (347)
T KOG0647|consen 158 ----------RVYAADV------------LYPMAVVATAERHIAVYNLENPPTE--FKRIESPL--KWQTRCVACFQ--- 208 (347)
T ss_pred ----------eeeehhc------------cCceeEEEecCCcEEEEEcCCCcch--hhhhcCcc--cceeeEEEEEe---
Confidence 1111111 1347888999999999999876432 22222322 23378888753
Q ss_pred cccCcccCCCCEEEEEecCCcEEEEECCCC--cEEEEEEccCC---------cEEEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWRAHDG---------YVTKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1457 ~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg--~~i~~l~gH~~---------~V~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
+....|.|+-.|.+.+..+..+ +.--+++.|.. .|++|+ +|.-..|+|++.||++..||-
T Consensus 209 --------d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 209 --------DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDK 280 (347)
T ss_pred --------cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecc
Confidence 3345699999999999998877 44456677763 467777 888889999999999999998
Q ss_pred CCCCCCCCeEeecCCCCEEE--EeecCCEEEEEe
Q 000355 1525 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISIS 1556 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs 1556 (1620)
... ..+.+...|..+|+| |+.+|.++|-+.
T Consensus 281 dar--~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 281 DAR--TKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred hhh--hhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 765 566777889999985 999999887663
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=233.08 Aligned_cols=258 Identities=16% Similarity=0.190 Sum_probs=212.8
Q ss_pred EEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEec-CCcceeE
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVND 1320 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~g-H~~~V~s 1320 (1620)
+|.|. ...+.+|+.. +....-..-+.+.|++|.|+++|++|+.|.. +|+|.|||..+.+.+..+.+ |...|-+
T Consensus 191 laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~----~g~v~iwD~~~~k~~~~~~~~h~~rvg~ 265 (484)
T KOG0305|consen 191 LAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTS----DGTVQIWDVKEQKKTRTLRGSHASRVGS 265 (484)
T ss_pred EEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeec----CCeEEEEehhhccccccccCCcCceeEE
Confidence 55554 3569999988 5544444445899999999999999999998 89999999999999999998 9999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEE-EeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCc
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSV-FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~-l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
++|. +..+ ++.|+.|.++|++..+.... +.+|. ..
T Consensus 266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~----------------------------------------qe 303 (484)
T KOG0305|consen 266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHR----------------------------------------QE 303 (484)
T ss_pred Eecc--CceEEEecCCCcEEEEEEecchhhhhhhhccc----------------------------------------ce
Confidence 9997 3333 66799999999998765433 33332 23
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEe--cC
Q 000355 1398 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SS 1475 (1620)
Q Consensus 1398 vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs--~D 1475 (1620)
|+.+.|++|+.++|+|+.|+.+.|||....+++..+..| ...|.+++|||.. ...||+|+ .|
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H------~aAVKA~awcP~q----------~~lLAsGGGs~D 367 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEH------TAAVKALAWCPWQ----------SGLLATGGGSAD 367 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCccccEEEecc------ceeeeEeeeCCCc----------cCceEEcCCCcc
Confidence 777888889999999999999999999888888888765 4459999999744 47899865 69
Q ss_pred CcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEE--EeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCC
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVS--SSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQ 1550 (1620)
Q Consensus 1476 g~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaS--gS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~ 1550 (1620)
++|++||+.+|+.+..+. -...|.+|. ++..+-|++ |-.++.|.||+..+. +.+..+.||+..|. ++||||.
T Consensus 368 ~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~--~~~~~l~gH~~RVl~la~SPdg~ 444 (484)
T KOG0305|consen 368 RCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM--KLVAELLGHTSRVLYLALSPDGE 444 (484)
T ss_pred cEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEecccc--ceeeeecCCcceeEEEEECCCCC
Confidence 999999999999998876 356788888 777765554 345778999999886 67789999999998 5999999
Q ss_pred EEEEEeCCc-eEEEecc
Q 000355 1551 DVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1551 ~LaSgs~D~-I~vwdl~ 1566 (1620)
.+++|+.|. +++|++-
T Consensus 445 ~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecccCcEEecccc
Confidence 999999998 9999986
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=226.12 Aligned_cols=259 Identities=18% Similarity=0.228 Sum_probs=202.1
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCCC-ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1308 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~g-~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l 1308 (1620)
+|||...+ ++.+|+| -.+.||+..+ ...+++.-....|.++.|-.||+++|+|.. .|.|+|+|..+...+
T Consensus 33 ~fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iL 103 (487)
T KOG0310|consen 33 CFSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVIL 103 (487)
T ss_pred ecCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHH
Confidence 38887765 4344554 5688998773 455666677889999999999999999987 799999998776677
Q ss_pred EEEecCCcceeEEEEeeCCCeE-E--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCC
Q 000355 1309 SGYYGHEEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1385 (1620)
Q Consensus 1309 ~~l~gH~~~V~sV~f~~~~~~l-a--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1385 (1620)
+.+.+|+.+|+.+.|+|.+..+ + |.|+.+++||+.++.....+.+|.
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht------------------------------ 153 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT------------------------------ 153 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc------------------------------
Confidence 8899999999999999988876 4 448999999999888644555442
Q ss_pred CCeEEEeecCCceEEEEEecC-CCEEEEEECCCcEEEEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCccc
Q 000355 1386 SGILSTAFDGNLYTCLHHIEC-VERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1463 (1620)
Q Consensus 1386 ~~v~sv~f~~~~vt~v~~s~d-g~~lasgs~DgtVrlwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~ 1463 (1620)
. .|.|.+++|. +..+++||.||+||+||+++. ..+.++. |...|..|++-
T Consensus 154 D----------YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l----------- 205 (487)
T KOG0310|consen 154 D----------YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL----------- 205 (487)
T ss_pred c----------eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------
Confidence 2 3455555554 457889999999999999986 5555554 45558888875
Q ss_pred CCCCEEEEEecCCcEEEEECCCCc-EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCC
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1541 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~-~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1541 (1620)
|+|..||+++. ..|++||+.+|. .+..+..|...|+|+. ..+++.|+|||.|+.|++||+.+- +.++.++ ..++
T Consensus 206 psgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~--Kvv~s~~-~~~p 281 (487)
T KOG0310|consen 206 PSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY--KVVHSWK-YPGP 281 (487)
T ss_pred CCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--EEEEeee-cccc
Confidence 55568888775 489999999665 4555556999999999 778999999999999999997664 3334433 4567
Q ss_pred EE--EEeecCCEEEEEeCCc
Q 000355 1542 IS--GFSVWGQDVISISNNK 1559 (1620)
Q Consensus 1542 V~--afSpdg~~LaSgs~D~ 1559 (1620)
|. +++|+++.++.|..||
T Consensus 282 vLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 282 VLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred eeeEEecCCCceEEEecccc
Confidence 77 4999999999999999
|
|
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=221.80 Aligned_cols=280 Identities=18% Similarity=0.267 Sum_probs=211.7
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Ccee----E-------------Ee-ecccCcEEEEEE
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL----S-------------SI-RAHHGALRSVAV 1277 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l----~-------------tl-~gH~~~V~svaf 1277 (1620)
.....|.-.|.+ ++||+.+ ..++|.|++|.=|++. |... . .- ++|...|.+++.
T Consensus 136 ~~~~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred eeeccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 344556666664 8999987 9999999999999976 3311 1 11 389999999999
Q ss_pred ccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccC
Q 000355 1278 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQS 1355 (1620)
Q Consensus 1278 spdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~ 1355 (1620)
|+||++||+|+. |..|.||+..|.+.++.++||.+.|.+++|-.....+ +|.|++|++|++..-..+.++-+|.
T Consensus 211 S~Dgkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHq 286 (479)
T KOG0299|consen 211 SSDGKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQ 286 (479)
T ss_pred cCCCcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCc
Confidence 999999999997 8999999999999999999999999999997665555 6669999999998766666665542
Q ss_pred CccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeC
Q 000355 1356 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1435 (1620)
Q Consensus 1356 ~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~ 1435 (1620)
+.|.++... .-++.+-+|+.|+++++|++.. +....+.+
T Consensus 287 ------------------------------d~v~~IdaL----------~reR~vtVGgrDrT~rlwKi~e-esqlifrg 325 (479)
T KOG0299|consen 287 ------------------------------DGVLGIDAL----------SRERCVTVGGRDRTVRLWKIPE-ESQLIFRG 325 (479)
T ss_pred ------------------------------cceeeechh----------cccceEEeccccceeEEEeccc-cceeeeeC
Confidence 223333222 2255666777999999999943 33344565
Q ss_pred CCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-cc-----------CCcEEEEE
Q 000355 1436 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AH-----------DGYVTKLA 1503 (1620)
Q Consensus 1436 ~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH-----------~~~V~sva 1503 (1620)
+ ...+.|+||. +...+++|++||.|.+|++.+.+++.+.+ +| ..+|++|+
T Consensus 326 ~------~~sidcv~~I------------n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla 387 (479)
T KOG0299|consen 326 G------EGSIDCVAFI------------NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLA 387 (479)
T ss_pred C------CCCeeeEEEe------------cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeE
Confidence 4 3458889985 33579999999999999999988887764 33 12899999
Q ss_pred -eCCCCEEEEEeCCCcEEEEECCCCC--CCCCeEeecCCCCEE--EEeecCCEEEEE-eCCc-eEEEeccC
Q 000355 1504 -APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKGHTNGIS--GFSVWGQDVISI-SNNK-IGLSSLSK 1567 (1620)
Q Consensus 1504 -spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~gH~~~V~--afSpdg~~LaSg-s~D~-I~vwdl~~ 1567 (1620)
.|...+++|||.+|.|++|-+..+. ...+..+. -.+-|+ +|+.+|+.+++| +... +.-|-...
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK 457 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence 8999999999999999999999872 22233333 344566 489999987777 4444 77777653
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=235.14 Aligned_cols=199 Identities=18% Similarity=0.173 Sum_probs=152.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|+..........++.+|+|.+.... .......+. +|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 46999999999999863322112345789999886532 222333444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC---ceEEE
Q 000355 190 GLITSVIPKTP-YTLENILQFS-----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 260 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~---~~~lK 260 (1620)
+..++||||++ ++|.+++... ....++...+..++.||+.||.|||+++++||||||+|||++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 99999999998 5999999742 223477888999999999999999999999999999999998754 12699
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........... ....++..|+|||.+.+..++.+.|+|+.|.+. |++++
T Consensus 152 l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~ellt 208 (269)
T cd05044 152 IGDFGLARDIYKSDYYRKE---------GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM-WEILT 208 (269)
T ss_pred ECCcccccccccccccccC---------cccCCCccccCHHHHccCCcccchhHHHHHHHH-HHHHH
Confidence 9999999843221110000 011235679999999998999999999999776 66553
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-22 Score=235.60 Aligned_cols=196 Identities=17% Similarity=0.140 Sum_probs=154.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
+|++.+.||+|+||.||++++.. ...++..+|||.++...... .....+. +|++++..+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~---~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVG---GHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEec---cccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 48889999999999999988532 22467889999987532211 1112233 899999999 5999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.+..+..+++||||+++ +|.+.+. ....+++..++.++.|+++||.|||++|++||||||+||+++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999985 9999987 345688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc--cccccccccccccchHHHH
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~--y~~~~d~W~~G~isnfeyL 326 (1620)
|+|||+++........ ......++..|+|||.+.+.. .+..+|+|+.|.+. |+++
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il-~el~ 202 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT-FELL 202 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH-HHHH
Confidence 9999998853221100 011122577899999887654 77899999999765 4444
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-21 Score=237.59 Aligned_cols=296 Identities=15% Similarity=0.118 Sum_probs=217.2
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC------------CeEEEEEecCCcceeEEEEeeCCCeEEEe--
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------INCVSGYYGHEEVVNDICVLSSSGRIASC-- 1333 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t------------g~~l~~l~gH~~~V~sV~f~~~~~~laS~-- 1333 (1620)
++..|.+|+.+|||..++|||. +.|+.+++|+... .+.+.+...|.+.|+||.|+++|.++||+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq--~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQ--VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred CCeeEEEEEecCCceeEecCCc--cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 3557999999999999999994 3599999998642 23456778899999999999999999655
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
|+.|.||+-... .....-+ +..+. ..+ ..-..+....-+...|..++|+|++.+++++
T Consensus 90 D~~v~iW~~~~~-~~~~~fg---------s~g~~------~~v------E~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~ 147 (942)
T KOG0973|consen 90 DRLVMIWERAEI-GSGTVFG---------STGGA------KNV------ESWKVVSILRGHDSDVLDVNWSPDDSLLVSV 147 (942)
T ss_pred cceEEEeeeccc-CCccccc---------ccccc------ccc------ceeeEEEEEecCCCccceeccCCCccEEEEe
Confidence 999999997641 1000000 00000 000 0000111222244456777777889999999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~ 1493 (1620)
+.|++|.+||.++.+.+..+++|.+ .|..+.|. |-|+++|+=++|++|++|++.+....+.+.
T Consensus 148 s~DnsViiwn~~tF~~~~vl~~H~s------~VKGvs~D-----------P~Gky~ASqsdDrtikvwrt~dw~i~k~It 210 (942)
T KOG0973|consen 148 SLDNSVIIWNAKTFELLKVLRGHQS------LVKGVSWD-----------PIGKYFASQSDDRTLKVWRTSDWGIEKSIT 210 (942)
T ss_pred cccceEEEEccccceeeeeeecccc------cccceEEC-----------CccCeeeeecCCceEEEEEcccceeeEeec
Confidence 9999999999999999999997654 47777775 677899999999999999988776777665
Q ss_pred ccC------CcEEEEE-eCCCCEEEEEe----CCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eeec-----CC-----
Q 000355 1494 AHD------GYVTKLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-----GQ----- 1550 (1620)
Q Consensus 1494 gH~------~~V~sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-----g~----- 1550 (1620)
.+- ..++.+. +|||++|+|.- .-.++.|.+-.+. +.-..+-||..+|.+ |+|. .+
T Consensus 211 ~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tW--k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~ 288 (942)
T KOG0973|consen 211 KPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTW--KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTST 288 (942)
T ss_pred cchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCc--eeeeeeecCCCceEEEEeChHHhccccccCCcc
Confidence 442 3567777 99999999864 3456888877554 555689999999885 6662 11
Q ss_pred -------EEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1551 -------DVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1551 -------~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+|+||.|+ |.||.... ..+.++...+ ....|.+++|+|||..|.+||.||+|.++
T Consensus 289 ~~~~~y~i~AvgSqDrSlSVW~T~~-----~RPl~vi~~l--------f~~SI~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 289 QPNCYYCIAAVGSQDRSLSVWNTAL-----PRPLFVIHNL--------FNKSIVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred CCCcceEEEEEecCCccEEEEecCC-----CCchhhhhhh--------hcCceeeeeEcCCCCeEEEEecCCeEEEE
Confidence 678899999 99999641 1222333333 34579999999999999999999999875
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-24 Score=228.15 Aligned_cols=197 Identities=19% Similarity=0.241 Sum_probs=152.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhh-ccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP-GCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIv~ 181 (1620)
.++.+-+..||.|+||+|+|-.+ .+.|+..|||+|+.... ..+.++++ .|.+.. +.-+.||||+
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~h------k~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVk 127 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLH------KPSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVK 127 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhc------CccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHH
Confidence 34566688999999999999775 26789999999987544 34445555 677754 4446899999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCce
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+||....++..||.||+|+-+|..+.++ -++..++|.-+-.|..-++.||.||-. ..|||||+||+|||++..|
T Consensus 128 fyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 128 FYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred HhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 9999999999999999999776655542 355678898888899999999999987 6899999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc--ccccccccccccccccchHHHHhhhhcccCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
.+||||||++......-. .+. ..+|. .|||||.+. ...|+-.+|.|+.| ++..+...|+
T Consensus 206 ~vKLCDFGIcGqLv~SiA----kT~-----daGCr---pYmAPERi~p~~~gyDiRSDvWSLG-------ITL~EvAtG~ 266 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDSIA----KTV-----DAGCR---PYMAPERIDPSDKGYDIRSDVWSLG-------ITLYEVATGN 266 (361)
T ss_pred CEeeecccchHhHHHHHH----hhh-----ccCCc---cccChhccCCccCCcchhhhhhhhc-------ceEeeeecCC
Confidence 899999999985432211 111 22333 699999775 44599999999999 4455555554
|
|
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=217.18 Aligned_cols=278 Identities=20% Similarity=0.272 Sum_probs=211.4
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE----EE-------------E-ecCCcceeEEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV----SG-------------Y-YGHEEVVNDICV 1323 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l----~~-------------l-~gH~~~V~sV~f 1323 (1620)
...+..|.-+|.+|++++|++++++++. |++|.-|++.+|+.. .. - ++|.+.|.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask----~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASK----DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCC----CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 4567789999999999999999999998 899999999887632 00 1 379999999999
Q ss_pred eeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEE
Q 000355 1324 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1401 (1620)
Q Consensus 1324 ~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1401 (1620)
++++.+++++ |..|.|||..+.+.++++.+|. +.|.+++|.
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr------------------------------~~V~~L~fr------- 253 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHR------------------------------GAVSSLAFR------- 253 (479)
T ss_pred cCCCcEEEecCCCceEEEecCcccchhhcccccc------------------------------cceeeeeee-------
Confidence 9999999766 9999999999999988887653 334444443
Q ss_pred EEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEE
Q 000355 1402 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1481 (1620)
Q Consensus 1402 ~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lw 1481 (1620)
.....+++++.|.+|++|++.....+.++-+|... |.+|... .-...+-+|+.|+++++|
T Consensus 254 ---~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~------v~~IdaL-----------~reR~vtVGgrDrT~rlw 313 (479)
T KOG0299|consen 254 ---KGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG------VLGIDAL-----------SRERCVTVGGRDRTVRLW 313 (479)
T ss_pred ---cCccceeeeecCCceEEEehhHhHHHHHHhCCccc------eeeechh-----------cccceEEeccccceeEEE
Confidence 34678999999999999999988888888776553 4444432 123466677799999999
Q ss_pred ECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEee-cC-----------CCCEEE--Eee
Q 000355 1482 DVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK-GH-----------TNGISG--FSV 1547 (1620)
Q Consensus 1482 D~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~-gH-----------~~~V~a--fSp 1547 (1620)
++. -+..-.+.+|.+.+-|++.-|...++|||.||.|.+|++.+.+ ++++.+ .| ..+|++ ..|
T Consensus 314 Ki~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKk--plf~~~~AHgv~~~~~~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 314 KIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKK--PLFTSRLAHGVIPELDPVNGNFWITSLAVIP 390 (479)
T ss_pred ecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccC--ceeEeeccccccCCccccccccceeeeEecc
Confidence 994 3444567889999999996677789999999999999998863 333322 12 226664 778
Q ss_pred cCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEE-eCCC
Q 000355 1548 WGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG-TEDG 1614 (1620)
Q Consensus 1548 dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg-s~DG 1614 (1620)
...+++|||.+| |++|.++. |.- ...-+++. ...+.|++++|+++|+.+++| |-..
T Consensus 391 ~sdL~asGS~~G~vrLW~i~~-----g~r--~i~~l~~l----s~~GfVNsl~f~~sgk~ivagiGkEh 448 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLWKIED-----GLR--AINLLYSL----SLVGFVNSLAFSNSGKRIVAGIGKEH 448 (479)
T ss_pred cCceEEecCCCCceEEEEecC-----Ccc--ccceeeec----ccccEEEEEEEccCCCEEEEeccccc
Confidence 899999999999 99999872 211 11222222 245679999999999965554 4443
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-22 Score=241.35 Aligned_cols=201 Identities=17% Similarity=0.172 Sum_probs=164.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++.++.+.||+|+||+|++|...... .+...||||.++.+.... ...+|+ +|+.+|.+|+|||+|+|
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~ps---gk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliRL 176 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPS---GKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIRL 176 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCC---CcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeEE
Confidence 456777899999999999998864322 356789999998865543 556777 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
||+..+ ..+.||||+++ |+|.+.|+......|.......|+.||+.||.||.++++|||||-..|||+.... .+||
T Consensus 177 yGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVKI 253 (1039)
T KOG0199|consen 177 YGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVKI 253 (1039)
T ss_pred eeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eeee
Confidence 999987 67899999999 7999999976677788888888999999999999999999999999999999877 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+||||.|..............+. -...|.|||.+....++.++|.|..|. +.||++.
T Consensus 254 ~DFGLmRaLg~ned~Yvm~p~rk--------vPfAWCaPEsLrh~kFShaSDvWmyGV-TiWEMFt 310 (1039)
T KOG0199|consen 254 CDFGLMRALGENEDMYVMAPQRK--------VPFAWCAPESLRHRKFSHASDVWMYGV-TIWEMFT 310 (1039)
T ss_pred ecccceeccCCCCcceEecCCCc--------CcccccCHhHhccccccccchhhhhhh-hHHhhhc
Confidence 99999997655443332221111 233599999999999999999999993 2244443
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=235.75 Aligned_cols=207 Identities=15% Similarity=0.192 Sum_probs=160.8
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
.++.+.||+|.||.||+|...-.. ....-.||||.-+.+-. ....+.|+ .|..+|+.++|||||+|+|+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~--kge~iaVAvKtCK~d~t-~d~tekfl--------qEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPE--KGERIAVAVKTCKTDCT-PDDTEKFL--------QEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccc--cCcceeeeeehhccCCC-hhhHHHHH--------HHHHHHHhCCCcchhheeee
Confidence 345689999999999999853221 12334689998876533 34466777 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+.. ...|||||.++ |.|..+++. +...++......|++||+.||.|||+++.|||||-..|||+.+.. -+||+||
T Consensus 460 ~~e-~P~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaDF 535 (974)
T KOG4257|consen 460 CVE-QPMWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLADF 535 (974)
T ss_pred eec-cceeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeeccc
Confidence 875 46899999999 899999985 345678888888999999999999999999999999999999988 6999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh-hhcccCCCCC
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF-LNKLAGRRWG 338 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~-ln~~~gRs~~ 338 (1620)
|++|......-.... ... -..-|||||-+.-..++.++|+|..|.-. ||.|+. ..+|.|-..+
T Consensus 536 GLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgVCm-WEIl~lGvkPfqgvkNs 599 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGVCM-WEILSLGVKPFQGVKNS 599 (974)
T ss_pred chhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHHHH-HHHHHhcCCcccccccc
Confidence 999976543221110 111 13459999999999999999999999433 666654 3445544433
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-19 Score=190.75 Aligned_cols=294 Identities=18% Similarity=0.187 Sum_probs=222.2
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC------CC--------eE-EEEEecCCcceeEEEEee
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------RI--------NC-VSGYYGHEEVVNDICVLS 1325 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~------tg--------~~-l~~l~gH~~~V~sV~f~~ 1325 (1620)
++.+|+ -+.+|++|+|+|.|.+.+.||. .++.||.... .+ .. -+.-+-|.+.|.|++|+|
T Consensus 25 ~i~~l~-dsqairav~fhp~g~lyavgsn----skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 25 AINILE-DSQAIRAVAFHPAGGLYAVGSN----SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred EEEEec-chhheeeEEecCCCceEEeccC----CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 455554 5678999999999999999997 7899987532 11 01 122356899999999999
Q ss_pred CCCeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEE
Q 000355 1326 SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH 1403 (1620)
Q Consensus 1326 ~~~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~ 1403 (1620)
.|..++ |.|++|++--.+...+. ..+|. +..+.|.+.|..++|-...
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~--~~g~d-----------------------le~nmhdgtirdl~fld~~------ 148 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCN--ATGHD-----------------------LEFNMHDGTIRDLAFLDDP------ 148 (350)
T ss_pred ccCeEEecCCCceEEEEeccccccc--ccCcc-----------------------eeeeecCCceeeeEEecCC------
Confidence 999994 55999999876544331 12221 2344566777777774321
Q ss_pred ecCCCEEEEE-ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEE
Q 000355 1404 IECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1482 (1620)
Q Consensus 1404 s~dg~~lasg-s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD 1482 (1620)
...|..++++ ..|..|.+-|..+|+..+.+.+|.+- |.++- +++|-.+++|+.|.+|++||
T Consensus 149 ~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh------ilaly------------swn~~m~~sgsqdktirfwd 210 (350)
T KOG0641|consen 149 ESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH------ILALY------------SWNGAMFASGSQDKTIRFWD 210 (350)
T ss_pred CcCceEEEecCCCcceEEEeecCCCCcceeecCCccc------EEEEE------------EecCcEEEccCCCceEEEEe
Confidence 1124556654 45888999999999999999987653 33332 25667999999999999999
Q ss_pred CCCCcEEEEEE--cc-----CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEE
Q 000355 1483 VRSGNVIASWR--AH-----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDV 1552 (1620)
Q Consensus 1483 ~~tg~~i~~l~--gH-----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~L 1552 (1620)
+|-..++.++. -| +..|.+|+ .|.|++|+||-.|.+..+||++.+ ..+..+..|+..|.| |||...++
T Consensus 211 lrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yl 288 (350)
T KOG0641|consen 211 LRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYL 288 (350)
T ss_pred eeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEE
Confidence 99998888874 23 25688999 999999999999999999999998 667789999999997 99999999
Q ss_pred EEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1553 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1553 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+||.|. |++-|+.. +...+. ... ..+ .|...+-.+.|+|+.--|++.|.|.++.+|.
T Consensus 289 lt~syd~~ikltdlqg--dla~el----~~~---vv~-ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 289 LTCSYDMKIKLTDLQG--DLAHEL----PIM---VVA-EHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred EEecccceEEEeeccc--chhhcC----ceE---EEE-eccCceEEEEecCccceeeeccCcceEEEec
Confidence 9999998 99999873 222221 111 111 3777888999999999999999999999994
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=230.89 Aligned_cols=193 Identities=13% Similarity=0.147 Sum_probs=159.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.+.|+..+.||+|+||.||++.+. .++..+++|.+..... ....+. +|+++++.++|+||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 567889999999999999999862 2568899999875432 233344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..|+|+||++ ++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++ .+||
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 999999999999999999 59999998432 3789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||++......... .....++..|+|||++.+..++.++|.|+.|.+. |+++.
T Consensus 158 ~d~~~~~~~~~~~~~-----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil-~~l~~ 211 (286)
T cd06614 158 ADFGFAAQLTKEKSK-----------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMC-IEMAE 211 (286)
T ss_pred Cccchhhhhccchhh-----------hccccCCcccCCHhHhcCCCCCCccccHHHHHHH-HHHHh
Confidence 999998743211100 0112256789999999988899999999999776 55443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=205.16 Aligned_cols=293 Identities=15% Similarity=0.199 Sum_probs=198.3
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe-----EEEEEecCCcceeEEEEeeCCCeE-EEe--
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-- 1333 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~-----~l~~l~gH~~~V~sV~f~~~~~~l-aS~-- 1333 (1620)
+.+|+||.+.|++++|+.||++|+|++. |++||||++.+-+ |++.-- --+--+.|.|.|+..-+ +++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~----Dr~Ir~w~~~DF~~~eHr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~ 153 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISG----DRSIRLWDVRDFENKEHRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKR 153 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeC----CceEEEEecchhhhhhhhHhhccc-cCCCceEEEECCCcceEEEEEcc
Confidence 4689999999999999999999999998 9999999997632 222110 11245778898887765 555
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
..++++|.+...+- ..+..+. .+ .. .. --...|.-. +..+.+...+.+|+++
T Consensus 154 g~~l~vyk~~K~~d-G~~~~~~-------v~------~D--~~--~f~~kh~v~----------~i~iGiA~~~k~imsa 205 (420)
T KOG2096|consen 154 GNKLCVYKLVKKTD-GSGSHHF-------VH------ID--NL--EFERKHQVD----------IINIGIAGNAKYIMSA 205 (420)
T ss_pred CCEEEEEEeeeccc-CCCCccc-------cc------cc--cc--ccchhcccc----------eEEEeecCCceEEEEe
Confidence 56777776532111 0000000 00 00 00 000011112 2234444568899999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECC---CCc---
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---SGN--- 1487 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~---tg~--- 1487 (1620)
+.|.+|-+||++ |+.+..+...... -. -...+|+|.++|+++-.-.|++|.+- .|+
T Consensus 206 s~dt~i~lw~lk-Gq~L~~idtnq~~------n~-----------~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqe 267 (420)
T KOG2096|consen 206 SLDTKICLWDLK-GQLLQSIDTNQSS------NY-----------DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQE 267 (420)
T ss_pred cCCCcEEEEecC-Cceeeeecccccc------cc-----------ceeeCCCCcEEEEecCCCCceEEEEEeccCcchhh
Confidence 999999999998 8888777643221 01 12234888999999999999999874 332
Q ss_pred --EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCC--CCCCeEeec--------CCCCEE-EEeecCCEEE
Q 000355 1488 --VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKG--------HTNGIS-GFSVWGQDVI 1553 (1620)
Q Consensus 1488 --~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~g--------H~~~V~-afSpdg~~La 1553 (1620)
.+..++||...|...+ +++...++|.|.||+++|||+.-.. .+-.++++. -..++. +++|.|+.||
T Consensus 268 v~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA 347 (420)
T KOG2096|consen 268 VKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLA 347 (420)
T ss_pred hhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEE
Confidence 4566889999999999 9999999999999999999975311 111222221 123444 6999999999
Q ss_pred EEeCCceEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1554 SISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1554 Sgs~D~I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+....+.++..+ +|.......+ -|...|++++|+|+|++++|+| |..++++
T Consensus 348 ~s~gs~l~~~~se-----~g~~~~~~e~--------~h~~~Is~is~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 348 VSFGSDLKVFASE-----DGKDYPELED--------IHSTTISSISYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred eecCCceEEEEcc-----cCccchhHHH--------hhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence 9887779999865 3332111122 3788999999999999999998 6666663
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=201.31 Aligned_cols=268 Identities=14% Similarity=0.099 Sum_probs=212.9
Q ss_pred cccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Ccee--EEeecccCcEEEEEEccCC-CEEEEeccCCCCC
Q 000355 1221 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL--SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFK 1294 (1620)
Q Consensus 1221 l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l--~tl~gH~~~V~svafspdg-~~LaSgs~d~~~D 1294 (1620)
+.+|...|.+ +..+|.. +++||.|+++++|+++ +..+ -..+||++.|-.++|+|.. ..+++++. |
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----d 86 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----D 86 (313)
T ss_pred hhhhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----C
Confidence 3455555554 6677776 9999999999999998 3332 3467999999999998864 68888887 8
Q ss_pred cEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-E-EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1295 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-A-SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-a-S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
++|++||..+++|......-.+.++ +.|+|+|+++ + ..|..|.+.|.++-+.....+...
T Consensus 87 k~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~----------------- 148 (313)
T KOG1407|consen 87 KTIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKF----------------- 148 (313)
T ss_pred ceEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccc-----------------
Confidence 9999999999999998876556655 6788999998 3 349999999999877665444211
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1452 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1452 (1620)
.+..+.++.+++.++..++.|+|.+.....-+++.+++.|.. ...||.|
T Consensus 149 ------------------------e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s------nCicI~f- 197 (313)
T KOG1407|consen 149 ------------------------EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS------NCICIEF- 197 (313)
T ss_pred ------------------------eeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCc------ceEEEEE-
Confidence 123344555688888888889999999888888888886542 2344444
Q ss_pred CCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC
Q 000355 1453 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1531 (1620)
Q Consensus 1453 ~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~ 1531 (1620)
+|+|+++|+|+.|..+.+||+...-+++.+..++-+|+.+. +.||++|||||+|..|-|=++.+| ..
T Consensus 198 ----------~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG--d~ 265 (313)
T KOG1407|consen 198 ----------DPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG--DR 265 (313)
T ss_pred ----------CCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccC--Ce
Confidence 37789999999999999999999889999999999999999 999999999999999999999998 55
Q ss_pred CeEeecCCCCEE--EEeecCCEEEEEeCCc
Q 000355 1532 PTVFKGHTNGIS--GFSVWGQDVISISNNK 1559 (1620)
Q Consensus 1532 ~~~l~gH~~~V~--afSpdg~~LaSgs~D~ 1559 (1620)
+..+. +.++.. +|+|...+||-+++|+
T Consensus 266 ~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 266 VWEIP-CEGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred EEEee-ccCCceeEEecCCCceeeEEecCC
Confidence 55554 334443 6999999999988765
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-22 Score=228.28 Aligned_cols=211 Identities=16% Similarity=0.103 Sum_probs=156.0
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc--cCCcccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG--CLRHPNV 179 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~--~l~HpNI 179 (1620)
+..+.++.+.||+|.||+||+|. +.|+.||||++... +...+. ||.+|.+ .|+|+||
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~--------wrGe~VAVKiF~sr-----dE~SWf--------rEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGR--------WRGEDVAVKIFSSR-----DERSWF--------RETEIYQTVMLRHENI 267 (513)
T ss_pred hhheeEEEEEecCccccceeecc--------ccCCceEEEEeccc-----chhhhh--------hHHHHHHHHHhccchh
Confidence 44578899999999999999988 57899999998542 222333 6666665 4599999
Q ss_pred cceeeEEEeCC----EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCceecCCCC
Q 000355 180 APVLGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCP 246 (1620)
Q Consensus 180 v~l~~~~~~~~----~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--------~gIiHRDLKP 246 (1620)
+.+++.-..++ .+|||.+|.+ |+|+|+|. ...++......++.-+++||+|||. -.|.|||||.
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 99999876554 8999999999 89999998 3578889999999999999999997 3599999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCC-CcccCCCCCCccceecccccCccchhhhccccccccc------ccccccccc
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIA-DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS------QFNRWWRGE 319 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~------~~d~W~~G~ 319 (1620)
.|||+..++ .+-|+|+|||-.-... ........++. ||..|||||++.+.--.. .+|+|+.|-
T Consensus 345 KNILVKkn~--~C~IADLGLAv~h~~~t~~idi~~N~rV--------GTKRYMAPEvLdetin~~~Fesyk~ADIYafgL 414 (513)
T KOG2052|consen 345 KNILVKKNG--TCCIADLGLAVRHDSDTDTIDIPPNPRV--------GTKRYMAPEVLDETINMKHFESYKRADIYAFGL 414 (513)
T ss_pred ccEEEccCC--cEEEeeceeeEEecccCCcccCCCCCcc--------ceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence 999999999 8999999999743222 22333344443 799999999987543333 456666663
Q ss_pred cchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 320 LSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 320 isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
+. +|..---+. .| ..+-.|-|.++||=
T Consensus 415 Vl-WEiarRc~~-gg--i~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 415 VL-WEIARRCES-GG--IVEEYQLPYYDVVP 441 (513)
T ss_pred HH-HHHHHHhhc-CC--EehhhcCCcccCCC
Confidence 32 332221111 22 34445666666665
|
|
| >KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=219.77 Aligned_cols=325 Identities=16% Similarity=0.175 Sum_probs=235.4
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCe--E-EEeCCcE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR--I-ASCDGTL 1337 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~--l-aS~DgtV 1337 (1620)
+-..++||++.|+|+...|.|.+|+|||. ||+||||.+.||.|++++. ..+.|.||+|+|.+.. | ++.++.+
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsd----DGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~ 466 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSD----DGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECV 466 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCC----CCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCce
Confidence 55678999999999999999999999998 9999999999999999887 5679999999987664 3 4556668
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCccccccccccccccc---CCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN---TLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~---~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.|-+..-|..+..-... . .....+.. ........++... ....+|+.+--+++.+..+.|+..|.++++..
T Consensus 467 ~ivnp~~G~~~e~~~t~--e-ll~~~~~~---~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~ 540 (733)
T KOG0650|consen 467 LIVNPIFGDRLEVGPTK--E-LLASAPNE---SEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVM 540 (733)
T ss_pred EEeCccccchhhhcchh--h-hhhcCCCc---cCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEec
Confidence 88887666332211100 0 00000000 0000111122222 23444666666777899999999999999877
Q ss_pred CC---CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEE
Q 000355 1415 GN---GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1491 (1620)
Q Consensus 1415 ~D---gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~ 1491 (1620)
.+ ..|.|.++...+...-|+.. ...|.++.|.|... ++++++. ..|++||+..+..+..
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~ks------kG~vq~v~FHPs~p-----------~lfVaTq-~~vRiYdL~kqelvKk 602 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFRKS------KGLVQRVKFHPSKP-----------YLFVATQ-RSVRIYDLSKQELVKK 602 (733)
T ss_pred cCCCcceEEEEecccccccCchhhc------CCceeEEEecCCCc-----------eEEEEec-cceEEEehhHHHHHHH
Confidence 64 46788888766544334321 33478888876553 5555553 5899999998888888
Q ss_pred EEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccC
Q 000355 1492 WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1492 l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~ 1567 (1620)
+.....+|.+++ +|+|..|+.||.|+.+..+|+.-+. +...+++-|...|.+ |++.-.+++||++|+ +.|+--..
T Consensus 603 L~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlss-kPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~V 681 (733)
T KOG0650|consen 603 LLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSS-KPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMV 681 (733)
T ss_pred HhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCc-chhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeee
Confidence 877778999999 9999999999999999999997653 556688999999985 777778899999999 87776443
Q ss_pred CCCCCCcceeeccceeeecCCCCccc----cEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1568 SADEDGQHRLVPQKLYMVDNGAKNLS----VLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1568 ~~~~~g~~~~~~~kl~~~~~g~~h~~----~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
-.+.-.++.+++.+... +|.. .|.++.|+|...+|.++|.||+||+|+
T Consensus 682 Y~Dl~qnpliVPlK~L~-----gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 682 YNDLLQNPLIVPLKRLR-----GHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLFT 733 (733)
T ss_pred ehhhhcCCceEeeeecc-----CceeecccceEeecccCCCceEEecCCCceEEeeC
Confidence 33444444455554432 3444 499999999999999999999999996
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1620 | ||||
| 1mi1_A | 414 | Crystal Structure Of The Ph-Beach Domain Of Human N | 2e-25 | ||
| 1t77_A | 414 | Crystal Structure Of The Ph-Beach Domains Of Human | 7e-22 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 4e-06 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 4e-06 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 4e-06 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 5e-06 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 5e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-05 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-05 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-05 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-05 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-05 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-05 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-05 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 2e-05 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-05 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-05 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-05 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-05 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 3e-05 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 3e-05 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-05 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-05 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-05 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-05 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-05 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-05 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-05 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 3e-05 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 3e-05 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-05 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-05 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-05 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-05 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 5e-05 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 5e-05 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 5e-05 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 5e-05 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 5e-05 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 5e-05 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 5e-05 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 5e-05 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 6e-05 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 6e-05 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-05 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-05 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-05 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 6e-05 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 7e-05 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 7e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 1e-04 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 1e-04 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-04 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-04 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-04 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-04 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-04 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-04 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-04 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-04 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-04 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-04 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-04 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-04 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-04 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 1e-04 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 1e-04 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-04 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-04 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-04 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-04 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 2e-04 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-04 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-04 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 2e-04 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-04 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-04 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-04 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-04 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-04 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-04 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-04 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-04 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 2e-04 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-04 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 2e-04 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-04 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-04 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-04 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 2e-04 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 2e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-04 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-04 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-04 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-04 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-04 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-04 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 3e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-04 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-04 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-04 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-04 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-04 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-04 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-04 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 3e-04 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-04 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-04 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-04 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-04 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-04 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-04 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-04 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 3e-04 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-04 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 3e-04 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 3e-04 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-04 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-04 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 4e-04 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-04 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-04 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 4e-04 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 4e-04 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 5e-04 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-04 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 5e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 5e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-04 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 7e-04 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 7e-04 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 7e-04 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 8e-04 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 8e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 8e-04 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-04 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-04 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 9e-04 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 9e-04 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 9e-04 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 9e-04 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 9e-04 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 9e-04 |
| >pdb|1MI1|A Chain A, Crystal Structure Of The Ph-Beach Domain Of Human Neurobeachin Length = 414 | Back alignment and structure |
|
| >pdb|1T77|A Chain A, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL Length = 414 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1620 | ||||
| d1t77a1 | 304 | a.169.1.1 (A:2186-2489) Lipopolysaccharide-respons | 7e-68 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 9e-18 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-12 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-12 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-07 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-06 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 8e-11 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-10 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 4e-08 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-06 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-10 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-07 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-10 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-07 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-10 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-08 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-05 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-09 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 0.002 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-04 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-09 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-04 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 0.001 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-09 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 0.003 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-09 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-07 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-08 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 0.002 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 0.004 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-08 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-05 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-05 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-04 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-08 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 9e-08 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 8e-06 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-07 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-07 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 0.002 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-07 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-06 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 1e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-06 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-07 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 6e-04 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-04 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-07 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 9e-07 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-06 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-04 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 7e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-06 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 5e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.001 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-06 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-04 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-04 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 5e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-05 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-05 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 6e-06 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 0.002 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 8e-06 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 9e-06 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 9e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.002 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 4e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-05 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-04 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-04 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 5e-05 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-05 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-04 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-04 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 6e-04 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (584), Expect = 7e-68
Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSKS 370
RW E+SNFEYL+FLN +AGR + D + V PWVI S + D + RDLSK
Sbjct: 28 QRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKP 87
Query: 371 -----KWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 425
R A E+ + H + V ++ R P + ++
Sbjct: 88 IGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGK 147
Query: 426 --EPNEYPSTMQRLYQWT------PDECIPEFYCDPQIFYSQHP----------GMTDLA 467
+ S++ R ++ + E IPEFY P++F + + ++D+
Sbjct: 148 FDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVE 207
Query: 468 VPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-- 525
+PPWA + EEF+ ++R ALES+ VS ++H WID+ FGYK G A+ A NV +
Sbjct: 208 LPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGA 267
Query: 526 ----------------TKPKSVGR--LQLFTQPHPVR 544
+ +S G+ QL +PHP R
Sbjct: 268 VNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 84.0 bits (206), Expect = 9e-18
Identities = 42/318 (13%), Positives = 103/318 (32%), Gaps = 22/318 (6%)
Query: 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1314
W + ++ H + V + +A T++ W+ + GH
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSAS----EDATIKVWDYETGDFERTLKGH 58
Query: 1315 EEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVF-------AEQSMDSLHGGSPSSS 1367
+ V DI S +ASC + + + S+ + G S
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1427
S+ T ++ + + + + + + + + ++R +
Sbjct: 119 ASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 175
Query: 1428 QKLHLWRG---EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1484
+ R + + S + + + ++ +G +++DV
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 1485 SGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1543
+G + + HD +V + ++S + DKTLR+WD + + H + ++
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHFVT 293
Query: 1544 G--FSVWGQDVISISNNK 1559
F V++ S ++
Sbjct: 294 SLDFHKTAPYVVTGSVDQ 311
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.8 bits (164), Expect = 2e-12
Identities = 45/236 (19%), Positives = 82/236 (34%), Gaps = 40/236 (16%)
Query: 1291 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL 1348
T++ WE+ CV + GH E V + IASC D T+ VW T +
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 178
Query: 1349 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE 1408
+ E IS ++ T S S L +
Sbjct: 179 AELREHR-------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--------- 222
Query: 1409 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1468
G + +++ D++ G L G + V + K +
Sbjct: 223 ----GSRDKTIKMWDVSTGMCLMTLVG------HDNWVRGVLFHSGGK-----------F 261
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
I + R++D ++ + + AH+ +VT L +V+ S+D+T+++W+
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (164), Expect = 2e-12
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 10/117 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
S +E ++++ E + HPN+ +L + +I +
Sbjct: 47 TKSEEELEDYMV--------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 98
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ +E ++ + Q L A+ YLH I HR + N+L T + + D
Sbjct: 99 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKLAD 153
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (125), Expect = 2e-07
Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 656 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 712
G+ + + ++S + + D++S+G L E+ P ++ L
Sbjct: 172 GTPYWMAPEVVMCETSKDRPYDYKA--DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229
Query: 713 GDLPGV--MEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ P + S+ + ++ C+ K+ R + LL+ P+
Sbjct: 230 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (157), Expect = 2e-11
Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 18/201 (8%)
Query: 174 LRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
+ P++ ++ + + ++ + L + +Q + +E +M
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQAFTEREASEIMKS 119
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 286
+ AI YLHS+ IAHR V P N+L T + + A T S C
Sbjct: 120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL-----TDFGFAKETTSHNSLTTPC 174
Query: 287 CIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVM 346
+ + K +S D S + L + N G +
Sbjct: 175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMY--ILLCGYPPFYSNH--GLAISPGMKTRIR 230
Query: 347 PWVIDFSTKPDENFDSGSRDL 367
+F + L
Sbjct: 231 MGQYEFPNPEWSEVSEEVKML 251
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 4e-06
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDS---------ISLAVYLENGDLPG-VMEELPSHTRI 728
D S D++S+G ++ L P F S + + + + P E+ ++
Sbjct: 191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 250
Query: 729 LVEACITKDWTRRPSAKSLLESPYF 753
L+ + + T+R + + P+
Sbjct: 251 LIRNLLKTEPTQRMTITEFMNHPWI 275
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.4 bits (155), Expect = 3e-11
Identities = 41/307 (13%), Positives = 79/307 (25%), Gaps = 39/307 (12%)
Query: 1252 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY 1311
+ +I+ ++R H + ++ G D + +A G + W+ N V
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSAS----QDGKLIIWDSYTTNKVHAI 93
Query: 1312 YGHEEVVNDICVLSSSGRIASCDGT-------LHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364
V S +A L + S
Sbjct: 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153
Query: 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1424
+ I + D L + L V G + S + D+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 1425 NQGQKLHLWRG---EPTELGF----PSLVSA--------------ICACGSEKMQAGGAV 1463
+G + G + + F + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 1464 ASPSW------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLD 1516
S S+ + AG C ++D + HD V+ L + + + S D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 1517 KTLRIWD 1523
L+IW+
Sbjct: 334 SFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.8 bits (138), Expect = 4e-09
Identities = 44/318 (13%), Positives = 94/318 (29%), Gaps = 44/318 (13%)
Query: 1313 GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370
GH + + + S + S DG L +W+S T + +S + + + S +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNY 111
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+ + + S R + + +
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
+ T G V ++ ++ +G +L+DVR G
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFV-----------SGACDASAKLWDVREGMCRQ 220
Query: 1491 SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV 1547
++ H+ + + P + + S D T R++DLR + GI+ FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 1548 WGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVL-------SSISI 1600
G+ +++ +D + + VL S + +
Sbjct: 281 SGRLLLA--------------GYDDFNCNV-----WDALKA-DRAGVLAGHDNRVSCLGV 320
Query: 1601 LPFSRLFLVGTEDGYLRL 1618
G+ D +L++
Sbjct: 321 TDDGMAVATGSWDSFLKI 338
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.7 bits (152), Expect = 8e-11
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 142 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 201
+ GK S ++ ++ ++ E LRHPN G V+
Sbjct: 48 MSYSGKQSNEKWQDIIK--------EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG 99
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261
+ ++L+ L E + + + L +AYLHS + HR V N+LL++ + +
Sbjct: 100 SASDLLEVHKKPL-QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156
Query: 262 CD 263
D
Sbjct: 157 GD 158
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.9 bits (124), Expect = 3e-07
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 656 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL--- 710
G+ + E++L + Y D++S+G EL R+P +++ L
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKV------DVWSLGITCIELAERKPPLFNMNAMSALYHI 226
Query: 711 -ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+N + R V++C+ K RP+++ LL+ +
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.9 bits (151), Expect = 1e-10
Identities = 40/280 (14%), Positives = 84/280 (30%), Gaps = 23/280 (8%)
Query: 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1322
SS + +RSV D + T + + + + + D
Sbjct: 115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ--GHEQDIYSLDYF 172
Query: 1323 VLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382
S D T+ +W+ +TG+ + + + SP +
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232
Query: 1383 TLSSGILSTAFDGNLYTCLHHIECV---------ERLVVGIGNGSLRFIDINQGQKLHLW 1433
+G L D + H + V + +V G + S++ ++
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292
Query: 1434 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493
+ + + + + +I +G +D +SGN + +
Sbjct: 293 KT-----PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 1494 AHDGYVTKLAA-------PEDHLLVSSSLDKTLRIWDLRR 1526
H V +A PE ++ + S D RIW ++
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.2 bits (131), Expect = 4e-08
Identities = 49/346 (14%), Positives = 107/346 (30%), Gaps = 60/346 (17%)
Query: 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSS 1327
H + V D + T G T Q + ++ + V+ D L++S
Sbjct: 61 HTSVVCCVKFSNDGEYLAT-----GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS 115
Query: 1328 GRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1387
+S V S GK L+ AE + + + + + + + + SG
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175
Query: 1388 ILSTA----------------------FDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425
+ + + T + + G + ++R D
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 235
Query: 1426 QGQKLH-LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1484
G + L + G V ++ + + +G +L++++
Sbjct: 236 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-----------SVVSGSLDRSVKLWNLQ 284
Query: 1485 SGNVIA------------SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1531
+ N + ++ H +V +A D ++S S D+ + WD + P
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344
Query: 1532 PTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRL 1577
+ +GH N + +V + N + D + R+
Sbjct: 345 --MLQGHRNSVISVAVANGSSLGPEYNVFA------TGSGDCKARI 382
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 62.4 bits (151), Expect = 1e-10
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 205
+ E S+ L HP + + + + ++ L +
Sbjct: 64 TPYPLDKYTVKN--------EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 115
Query: 206 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ + SE V M Q + ++H I H + P N++ S + I D
Sbjct: 116 RIAAEDYKM-SEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 172
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 48.9 bits (116), Expect = 3e-06
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN---GDL---PGVMEELPSHTRILVEA 732
D+++IG L L F L+N D + + ++
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 265
Query: 733 CITKDWTRRPSAKSLLESPYF 753
+ K+ +R + LE P+
Sbjct: 266 LLQKEPRKRLTVHDALEHPWL 286
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (150), Expect = 1e-10
Identities = 57/339 (16%), Positives = 111/339 (32%), Gaps = 36/339 (10%)
Query: 1300 WELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL-------- 1348
W + GH++ V I L G S D TL VW++ TGK L
Sbjct: 1 WRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 1349 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE 1408
V++ Q D++ + K+ + G + +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 1409 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA--------- 1459
V I G + + + + + + + + E
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 1460 --GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDK 1517
+ +G R++DV +GN I + H + + +D++LVS + D
Sbjct: 179 RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILVSGNADS 237
Query: 1518 TLRIWDLRRNWP-SQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1575
T++IWD++ H + ++ VI+ S++ + L L + G+
Sbjct: 238 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL-----KTGE- 291
Query: 1576 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDG 1614
+ L +++G V I + VG+ +G
Sbjct: 292 --FIRNLVTLESGGSGGVV-WRIRASNTKLVCAVGSRNG 327
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 62.0 bits (150), Expect = 2e-10
Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 205
+ + + E LRHP + + + + + L
Sbjct: 61 TPHESDKETVRK--------EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 112
Query: 206 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ N + SE M Q+ + ++H H + P N++ T + L + D
Sbjct: 113 KVADEHNKM-SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID 169
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 49.7 bits (118), Expect = 2e-06
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPG-VMEELPSHTRILVEACITK 736
D++S+G L L F + L N ++ + + + +
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 266
Query: 737 DWTRRPSAKSLLESPYF 753
D R + LE P+
Sbjct: 267 DPNTRMTIHQALEHPWL 283
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.6 bits (149), Expect = 2e-10
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLEN 205
K G + + E S+ RH N+ + ++ + + +
Sbjct: 39 KVKGTDQVLVKK--------EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90
Query: 206 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ S L +E + ++Q+ A+ +LHS I H + P N++ S + I +
Sbjct: 91 RINTSAFEL-NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (127), Expect = 1e-07
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEACITK 736
D++S+G L+ L F + + +E N + +E+ V+ + K
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 737 DWTRRPSAKSLLESPYF 753
+ R +A L+ P+
Sbjct: 245 ERKSRMTASEALQHPWL 261
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 2e-10
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E + LRHPN+ + G + + ++ P + E + +
Sbjct: 56 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 114
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
L +A++Y HS + HR + P N+LL + L I D
Sbjct: 115 LANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIAD 149
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 1e-07
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 736
D D++S+G L E + +P F++ + + + + R L+ +
Sbjct: 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 241
Query: 737 DWTRRPSAKSLLESPYF 753
+ ++RP + +LE P+
Sbjct: 242 NPSQRPMLREVLEHPWI 258
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.6 bits (144), Expect = 7e-10
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 203
++ K + +N + E + L H NV G + + +
Sbjct: 38 VDMKRAVDCPENIKK--------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ E + +QL++ + YLH +GI HR + P N+LL + L I D
Sbjct: 90 LFDRIEPDIGM-PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISD 146
Query: 264 KPL 266
L
Sbjct: 147 FGL 149
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 6e-08
Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 737
D++S G +L + +D S + + E +++ S L+ + ++
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN 247
Query: 738 WTRRPSAKSLLESPYF 753
+ R + + + ++
Sbjct: 248 PSARITIPDIKKDRWY 263
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (142), Expect = 1e-09
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 10/120 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K FL E+++ L+H + + ++ + +L +
Sbjct: 46 KQGSMSPDAFLA--------EANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266
L+ + + + Q+ +A++ HR + +N+L++D I D L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGL 155
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (106), Expect = 4e-05
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 672 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 727
+ D++S G LL E + R + ++ + LE G + P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY 240
Query: 728 ILVEACITKDWTRRPSAKSLLE--SPYFPST 756
L+ C + RP+ L +F +T
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.9 bits (142), Expect = 1e-09
Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADW 275
SE R +M LL I LH L I HR + P N+LL D + + D +
Sbjct: 108 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEK 165
Query: 276 CTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
E + +D S
Sbjct: 166 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.0 bits (124), Expect = 2e-07
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 732
D++S G ++ L P F + L +G+ ++ + LV
Sbjct: 193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 733 CITKDWTRRPSAKSLLESPYF 753
+ +R +A+ L P+F
Sbjct: 253 FLVVQPQKRYTAEEALAHPFF 273
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.6 bits (141), Expect = 2e-09
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
DE + + HP + + G + + I ++ L + +F
Sbjct: 53 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAA 111
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 285
++ A+ YLHS I +R + P N+LL + + I D +P
Sbjct: 112 EVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKITD--------FGFAKYVPDVTYTL 161
Query: 286 CCIEGCSSQGLYADLKLSQSMDWHS 310
C + + + ++S+DW S
Sbjct: 162 CGTPDYIAPEVVSTKPYNKSIDWWS 186
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDLPGVMEELPSHTRILVEACIT 735
+ S D +S G L+ E+ F + E N +L + L+ IT
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFNEDVKDLLSRLIT 237
Query: 736 KDWTRR-----PSAKSLLESPYF 753
+D ++R + + P+F
Sbjct: 238 RDLSQRLGNLQNGTEDVKNHPWF 260
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.7 bits (141), Expect = 2e-09
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 11/144 (7%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E + + P + + K + + V+ SE H RF Q
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQ 149
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 286
++ YLHSL + +R + P N+L+ + + A T + G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG--------FAKRVKGRTWTLCGT 201
Query: 287 CIEGCSSQGLYADLKLSQSMDWHS 310
++++DW +
Sbjct: 202 PEALAPEI--ILSKGYNKAVDWWA 223
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.2 bits (140), Expect = 3e-09
Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 203
++ + ++ ++FL E+S+ G HPNV + G++ S + +
Sbjct: 62 LKSGYTEKQRRDFLS--------EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 113
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ + + + ++ + + + YL + HR + N+L+ + + D
Sbjct: 114 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKVSD 171
Query: 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
L F TS + G ++ K + + D S
Sbjct: 172 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.1 bits (93), Expect = 0.002
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 683 DIFSIGCLLAEL--HLRRPLFDSISLAVY--LENGDLPGVMEELPSHTRILVEACITKDW 738
D++S G ++ E+ + RP +D + V +E + PS L+ C KD
Sbjct: 215 DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 274
Query: 739 TRRPSAKSLLES 750
RP ++ +
Sbjct: 275 NHRPKFGQIVNT 286
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.7 bits (139), Expect = 3e-09
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWT 739
DI+S+GCLL EL P F + S LA + G + ++ +
Sbjct: 196 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY 255
Query: 740 RRPSAKSLLESPY 752
RPS + +LE+P
Sbjct: 256 HRPSVEEILENPL 268
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (102), Expect = 1e-04
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 146 GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL--GLLKTSGLITSVIPKTPY-T 202
G + E + + E ++ L+HPN+ + +T+ + V+
Sbjct: 40 GSMTEAEKQMLVS--------EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD 91
Query: 203 LENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLTDSC 255
L +++ + E V +M QL A+ H + HR + P+NV L
Sbjct: 92 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 151
Query: 256 WSWLYICD 263
+ + D
Sbjct: 152 --NVKLGD 157
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 3e-09
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 16/146 (10%)
Query: 174 LRHPNVAPVLGLLKTSG---------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
L H N+ + +SG L+ +P+T Y + + L +V+ M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLYM 128
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMI 284
YQL ++AY+HS GI HR + P N+LL +CD +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-KLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 285 GCCIEGCSSQGLYADLKLSQSMDWHS 310
E Y + S+D S
Sbjct: 188 YRAPELIFGATDY-----TSSIDVWS 208
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 24/154 (15%), Positives = 38/154 (24%), Gaps = 35/154 (22%)
Query: 631 ENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCL 690
+ + L D L V E ++ Y +R S D++S GC+
Sbjct: 157 PDTAVLKLCDFGSAKQL----VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 691 LAELHLRRPLFD-------------------------------SISLAVYLENGDLPGVM 719
LAEL L +P+F +
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 720 EELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
P L + T R + +F
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 57.5 bits (138), Expect = 4e-09
Identities = 21/96 (21%), Positives = 33/96 (34%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
ES + ++ P + G ++ + L + S V L Q
Sbjct: 52 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQ 111
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262
++S I Y+HS HR V P N L+ L
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 147
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.6 bits (94), Expect = 0.001
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE----------NGDLPGVMEELPSHTRI 728
D+ S+G +L +L + + A + + + + + PS
Sbjct: 191 SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFAT 250
Query: 729 LVEACITKDWTRRPSA---KSLLESPYFPSTVKSSYLF 763
+ C + + +P + L + + Y+F
Sbjct: 251 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 4e-09
Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 14/170 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
+ ++F+ E+ V L HP + + G+ I V + +
Sbjct: 38 REGAMSEEDFIE--------EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266
+ L + + + + +AYL + HR + N L+ ++ + + D +
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGM 147
Query: 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 316
F + D ++ +S +++ + S D S W
Sbjct: 148 TRF--VLDDQYTSSTGTKFPV--KWASPEVFSFSRYSSKSDVWSFGVLMW 193
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 0.003
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPGVMEELPSHTRILVEACI 734
D++S G L+ E+ + + + + G +H ++ C
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 239
Query: 735 TKDWTRRPSAKSLLE 749
+ RP+ LL
Sbjct: 240 KERPEDRPAFSRLLR 254
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 4e-09
Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
++PN+ L + V+ +L +++ + E + + + L A+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM---DEGQIAAVCRECLQALE 130
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 287
+LHS + HR + N+LL + + D GF + S M+G
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDG--SVKLTD---FGFCAQITPEQSKRSTMVGTP 180
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (123), Expect = 4e-07
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVM-----EELPSHTRILVEAC 733
DI+S+G + E+ P + + + L G E+L + R + C
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 734 ITKDWTRRPSAKSLLESPYF 753
+ D +R SAK LL+ +
Sbjct: 254 LDMDVEKRGSAKELLQHQFL 273
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 57.9 bits (139), Expect = 4e-09
Identities = 45/233 (19%), Positives = 76/233 (32%), Gaps = 16/233 (6%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
PN+ + ++K T + + Q +++ +RF MY++L A+
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALD 143
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 292
Y HS+GI HR V P NV++ L + D L F + + E
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 293 SQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF 352
+Y S+D S + + F + + + D+
Sbjct: 203 DYQMY-----DYSLDMWSLGCMLA--SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 353 STKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 405
K + D D+ R + + SE H VS E L L
Sbjct: 256 IDKYNIELDPRFNDILGRHSR------KRWERFVHSENQHLVSPEALDFLDKL 302
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.6 bits (137), Expect = 4e-09
Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 43/293 (14%)
Query: 1301 ELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMD 1357
L RI+C E + L + D T+ +W+ T + + +
Sbjct: 4 SLQRIHC------RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS 57
Query: 1358 SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417
L I + +++G + + LH +V +
Sbjct: 58 VLC--LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 115
Query: 1418 SLRFIDINQGQKLHLWRGEPTELGFPSLV------------------------SAICACG 1453
S+ D+ + L R ++V +
Sbjct: 116 SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 175
Query: 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSS 1513
K + +G S RL+D+ G + H+ + + ++ +VS
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFDNKRIVSG 234
Query: 1514 SLDKTLRIWDLRRNWPSQPT-------VFKGHTNGISGFSVWGQDVISISNNK 1559
+ D +++WDL + H+ + ++S S++
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 287
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (127), Expect = 6e-08
Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 37/294 (12%)
Query: 1262 LSSIRAHHGALRSV-AVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320
L I + V + D+ + + T++ W+ + C GH V
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGL----RDNTIKIWDKNTLECKRILTGHTGSVLC 60
Query: 1321 ICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI-NTDQVGML 1379
+ S D T+ VW+ TG++L+ LH + + + +
Sbjct: 61 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 120
Query: 1380 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1439
+ + + L G+ + +V G+ +++ + + + + G
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 1440 LGFPSLVSAICACG---------------------SEKMQAGGAVASPSWIAAGLSSGQC 1478
+ + G + I +G G+
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240
Query: 1479 RLFDVRSGN---------VIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWD 1523
+++D+ + + + H G V +L ++ +VSSS D T+ IWD
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ-FDEFQIVSSSHDDTILIWD 293
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.4 bits (138), Expect = 6e-09
Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
P + + T ++ ++ L L + + SE +RF +++ +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLE 121
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 292
++H+ + +R + P+N+LL + + I D +A + +
Sbjct: 122 HMHNRFVVYRDLKPANILLDE--HGHVRISD------LGLACDFSKKKPHASVGTHGYMA 173
Query: 293 SQGLYADLKLSQSMDWHS 310
+ L + S DW S
Sbjct: 174 PEVLQKGVAYDSSADWFS 191
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.7 bits (92), Expect = 0.002
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE-----NGDLPGVMEELPSHTRILVEAC 733
D S D FS+GC+L +L F E + + R L+E
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 243
Query: 734 ITKDWTRRPS-----AKSLLESPYF 753
+ +D RR A+ + ESP+F
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKESPFF 268
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 7e-09
Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 203
++ + ++ +FL E+ + G H N+ + G++ + +
Sbjct: 44 LKAGYTEKQRVDFLG--------EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 95
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ + S + ++ + + + YL ++ HR + N+L+ + + D
Sbjct: 96 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKVSD 153
Query: 264 KPL 266
L
Sbjct: 154 FGL 156
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 0.004
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEACITKDW 738
D++S G ++ E+ + + +G + PS L+ C ++
Sbjct: 195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 254
Query: 739 TRRPSAKSLLE 749
RRP ++
Sbjct: 255 ARRPKFADIVS 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-08
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 149 SGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG----LITSVIPKTPYTLE 204
+ ++ FL E+SV LRH N+ +LG++ ++T + K +L
Sbjct: 40 NDATAQAFLA--------EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG--SLV 89
Query: 205 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+ L+ ++ + + A+ YL HR + NVL+++
Sbjct: 90 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN 140
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (104), Expect = 7e-05
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 683 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 738
D++S G LL E R + I + +E G + P +++ C D
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 241
Query: 739 TRRPSAKSLLE 749
RPS L E
Sbjct: 242 AMRPSFLQLRE 252
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-08
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L HP + + + + + E RF +++SA+ Y
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEY 123
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 293
LH GI HR + P N+LL + + I D G + + S
Sbjct: 124 LHGKGIIHRDLKPENILLNEDM--HIQITD---FGTAKVLSPESKQARANSFVGTAQYVS 178
Query: 294 QGLYADLKLSQSMDWHS 310
L + +S D +
Sbjct: 179 PELLTEKSACKSSDLWA 195
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.8 bits (108), Expect = 2e-05
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPGVMEELPSHTRILVEAC 733
S D++++GC++ +L P F + + + + D P E+ R LVE
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFFPKARDLVEKL 244
Query: 734 ITKDWTRRPSAK------SLLESPYF 753
+ D T+R + L P+F
Sbjct: 245 LVLDATKRLGCEEMEGYGPLKAHPFF 270
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.1 bits (132), Expect = 2e-08
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 205
K E + FL+ E++V ++HPN+ +LG+ + Y L +
Sbjct: 51 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 206 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
L+ S + ++ Q+ SA+ YL HR + N L+ ++
Sbjct: 103 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.3 bits (132), Expect = 3e-08
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 13/143 (9%)
Query: 173 CLRHPNVAPVLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
HPNV + + S +T V L L P ++ +M+QL
Sbjct: 66 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 287
L + +LHS + HR + P N+L+T S L +A + +
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--------LARIYSFQMALTSVVV 177
Query: 288 IEGCSSQGLYADLKLSQSMDWHS 310
+ + + +D S
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWS 200
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 2e-04
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 29/104 (27%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-------------------------- 712
D++S+GC+ AE+ R+PLF S L
Sbjct: 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 252
Query: 713 ---GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ + ++ + L+ C+T + +R SA S L PYF
Sbjct: 253 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 3e-08
Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPY 201
++ +++ +R E+ + L +P + ++G+ + L+ +
Sbjct: 44 LKQGTEKADTEEMMR--------EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGG-- 93
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259
L L + +V L++Q+ + YL HR + NVLL + ++ +
Sbjct: 94 PLHKFLVGKREEI-PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI 150
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 4e-08
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
P + G + G I+ + + + + E + + ++ + Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILGKVSIAVIKGLTY 119
Query: 234 LHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 263
L I HR V PSN+L+ + +CD
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRG--EIKLCD 148
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (129), Expect = 5e-08
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPYTLE 204
+ Q+ + F E V RH N+ +G ++T + +L
Sbjct: 42 APTPQQLQAFKN--------EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS--SLY 91
Query: 205 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ L + + Q + YLH+ I HR + +N+ L +
Sbjct: 92 HHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 5e-06
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 656 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN- 712
GS+ + E++ + K+ YS D+++ G +L EL + + +I+ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSF------QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 713 -------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750
DL V P + L+ C+ K RP +L S
Sbjct: 222 VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.5 bits (129), Expect = 6e-08
Identities = 28/298 (9%), Positives = 73/298 (24%), Gaps = 5/298 (1%)
Query: 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1319
L + H G + ++ + + + K +
Sbjct: 44 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 102
Query: 1320 DICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD---QV 1376
S D TLHVW + E+ L +P + +
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162
Query: 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1436
+ + + ++S ++D L ++ G + I ++ ++ +
Sbjct: 163 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 222
Query: 1437 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1496
T + + G + ++ + H
Sbjct: 223 TTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHT 282
Query: 1497 GYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVIS 1554
++ S + I++LR + I + G+ +++
Sbjct: 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH-ANILKDADQIWSVNFKGKTLVA 339
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 4e-05
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 1465 SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDL 1524
+++ G R++D + + HDG V L +LVS S D+T+R+WD+
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDI 81
Query: 1525 RRNWPSQPTVFKGHTNGISGFSVW 1548
++ + T +
Sbjct: 82 KKGCCTHVFEGHNSTVRCLDIVEY 105
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 1e-04
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 1490 ASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG 1549
+ R H V ED+ +++ + DK +R++D GH G+
Sbjct: 6 TTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAH 63
Query: 1550 QDVI 1553
++
Sbjct: 64 GGIL 67
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (128), Expect = 9e-08
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 10/139 (7%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAI 231
HP + + +T + V+ L +Q F +++ +
Sbjct: 59 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGL 116
Query: 232 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 291
+LHS GI +R + N+LL I D F + C
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIK--IAD-----FGMCKENMLGDAKTNTFCGTPDY 169
Query: 292 SSQGLYADLKLSQSMDWHS 310
+ + K + S+DW S
Sbjct: 170 IAPEILLGQKYNHSVDWWS 188
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (112), Expect = 8e-06
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 736
+ S D +S G LL E+ + + F + D P L + L+ +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 240
Query: 737 DWTRRPSAKS-LLESPYF 753
+ +R + + + P F
Sbjct: 241 EPEKRLGVRGDIRQHPLF 258
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 53.3 bits (127), Expect = 1e-07
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L P + GL ++ L S V Q+L+ +
Sbjct: 57 LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 234 LHSLGIAHRSVCPSNVLLTDSCW---SWLYICD----KPLVGFNSIADWCTIPTSPMIGC 286
+H + +R + P N L+ + +Y+ D K + + G
Sbjct: 117 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176
Query: 287 C 287
Sbjct: 177 A 177
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (128), Expect = 1e-07
Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 31/237 (13%)
Query: 174 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 230
+RH NV +L + T P+ ++ + + E ++FL+YQ+L
Sbjct: 74 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 133
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEG 290
+ Y+H+ GI HR + P N+ + + C + + + +
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR---------WY 184
Query: 291 CSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR--WGDYTFHMVMPW 348
+ + + ++ +Q++D S + + G+ G +
Sbjct: 185 RAPEVILNWMRYTQTVDIWSVG-------------CIMAEMITGKTLFKGSDHLDQLKEI 231
Query: 349 VIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 405
+ T P E D +K+ + E+ DF + I + S ++ L
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF----ASILTNASPLAVNLLEKM 284
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (92), Expect = 0.002
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 33/108 (30%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAV------------------------------ 708
+ DI+S+GC++AE+ + LF
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256
Query: 709 ---YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
LE D ++ L+E + D +R +A L PYF
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.1 bits (127), Expect = 1e-07
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 732
+ D +SIG + L P F + A E + +++ + +
Sbjct: 187 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 246
Query: 733 CITKDWTRRPSAKSLLESPYF-PSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKA 791
+ KD +R + + L+ P+ T + + + I ++ ++ ++ F ++
Sbjct: 247 LMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRH 306
Query: 792 M 792
M
Sbjct: 307 M 307
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.1 bits (114), Expect = 4e-06
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 174 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 230
++HPN+ + + ++ G LI ++ L + + +E L++Q+L A
Sbjct: 64 IKHPNIVALDDIYESGGHLYLIMQLVSGG--ELFDRIV--EKGFYTERDASRLIFQVLDA 119
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSCWSW-LYICDKPL 266
+ YLH LGI HR + P N+L + I D L
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 156
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 1e-07
Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 28/136 (20%)
Query: 173 CLRHPNVAPVLG----------------------LLKTSGLITSVIPKTPYTLENILQFS 210
H N+ +LG L++ S + + +
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 211 PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD----KPL 266
+ + + YQ+ + +L HR + NVL+T + ICD + +
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDI 214
Query: 267 VGFNSIADWCTIPTSP 282
+ ++
Sbjct: 215 MSDSNYVVRGNARLPV 230
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (124), Expect = 2e-07
Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 1/108 (0%)
Query: 175 RHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 234
V +L + ++ + + + E R +Q+L A+ +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 235 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 282
H+ G+ HR + N+L+ + L + D + +
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLKDTVYTDFDGTR 173
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 2e-06
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDW 738
S ++S+G LL ++ F+ + G + + + S + L+ C+
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE---EIIRGQVF-FRQRVSSECQHLIRWCLALRP 243
Query: 739 TRRPSAKSLLESPYF 753
+ RP+ + + P+
Sbjct: 244 SDRPTFEEIQNHPWM 258
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.1 bits (124), Expect = 3e-07
Identities = 40/235 (17%), Positives = 82/235 (34%), Gaps = 22/235 (9%)
Query: 174 LRHPNVAPVLGLLKTSGLIT--SVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
RH N+ + +++ + V T ++ + S H+ + +YQ+L +
Sbjct: 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122
Query: 232 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 291
Y+HS + HR + PSN+LL +C L ICD L P G E
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARV-------ADPDHDHTGFLTEYV 173
Query: 292 SSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHMVMPWVI 350
+++ A + S + + W G + L+ R + + + ++
Sbjct: 174 ATRWYRAPEIMLNSKGYTKSIDIWSVG-------CILAEMLSNRPIFPGKHYLDQLNHIL 226
Query: 351 DFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 405
P + + +L + L+ + + + + + L L
Sbjct: 227 GILGSPSQEDLNCIINLKARNYLLSLPHKN---KVPWNRLFPNADSKALDLLDKM 278
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 6e-04
Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 33/149 (22%)
Query: 638 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR 697
+ D L + + EY +R + S DI+S+GC+LAE+
Sbjct: 150 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209
Query: 698 RPLFDSISLAVYLEN---------------------------------GDLPGVMEELPS 724
RP+F L + + S
Sbjct: 210 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 269
Query: 725 HTRILVEACITKDWTRRPSAKSLLESPYF 753
L++ +T + +R + L PY
Sbjct: 270 KALDLLDKMLTFNPHKRIEVEQALAHPYL 298
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.2 bits (122), Expect = 3e-07
Identities = 17/113 (15%), Positives = 30/113 (26%), Gaps = 8/113 (7%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K F+ E+ V L H + + G+ I +
Sbjct: 37 KEGSMSEDEFIE--------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259
+ + + A+ YL S HR + N L+ D +
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (123), Expect = 3e-07
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMY 225
ES V RHP + + +T + V+ L L + +E RF
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGA 112
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 285
+++SA+ YLHS + +R + N++L + I D G G
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITD---FGLCKEGISDGATMKTFCG 167
Query: 286 CCIEGCSSQGLYADLKLSQSMDWHS 310
+ + D +++DW
Sbjct: 168 TP--EYLAPEVLEDNDYGRAVDWWG 190
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (97), Expect = 6e-04
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 656 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 712
G+ EY + D + +G ++ E+ R F + E
Sbjct: 167 GTPEYLAPEVLEDNDYGRAV-------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 713 GDLPGVMEELPSHTRILVEACITKDWTRRPS-----AKSLLESPYF 753
++ L + L+ + KD +R AK ++E +F
Sbjct: 220 EEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 51.3 bits (122), Expect = 4e-07
Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWH 219
E+ L HP + V + ++ + TL +I+ +
Sbjct: 57 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGV--TLRDIVHTEGP--MTPKR 112
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 279
++ A+ + H GI HR V P+N++++ + + +IAD
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----ARAIADSGNSV 168
Query: 280 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
T S + D +S
Sbjct: 169 TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 199
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.0 bits (120), Expect = 6e-07
Identities = 26/292 (8%), Positives = 64/292 (21%), Gaps = 41/292 (14%)
Query: 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-----YYGHEEVVNDIC 1322
H + +V + V+T G KG V+ W+++ S + +
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104
Query: 1323 VLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382
+L + + + S + + N
Sbjct: 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164
Query: 1383 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS------------------------ 1418
+ + C++ G +
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224
Query: 1419 -----LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1473
L + + + + L + + W +
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG 284
Query: 1474 SSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1524
+ G I + V + +D +V+ S DK ++++
Sbjct: 285 KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 49.9 bits (118), Expect = 9e-07
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 7/144 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E S+ L+H N+ + ++ T + V L+ +L L + + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL-ESVTAKSFLLQ 108
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 286
LL+ IAY H + HR + P N+L+ L I D L I +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWY 166
Query: 287 CIEGCSSQGLYADLKLSQSMDWHS 310
L K S ++D S
Sbjct: 167 RAPDV----LMGSKKYSTTIDIWS 186
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 43.3 bits (101), Expect = 2e-04
Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 31/139 (22%)
Query: 646 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 705
L + L +R + + DI+S+GC+ AE+ PLF +S
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 706 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 734
A L ++ L L+ +
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 735 TKDWTRRPSAKSLLESPYF 753
D +R +AK LE YF
Sbjct: 266 KLDPNQRITAKQALEHAYF 284
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 1e-06
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Query: 176 HPNVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 234
P + + +T L + L L +E V+ + +++ A+ +L
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHL 145
Query: 235 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQ 294
H LGI +R + N+LL + + + D L T G
Sbjct: 146 HKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKE--FVADETERAYDFCGTIEYMAPDI 201
Query: 295 GLYADLKLSQSMDWHS 310
D +++DW S
Sbjct: 202 VRGGDSGHDKAVDWWS 217
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEACITK 736
D +S+G L+ EL F P +E+ + + L++ + K
Sbjct: 214 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 737 DWTRRPS-----AKSLLESPYF 753
D +R A + E +F
Sbjct: 274 DPKKRLGCGPRDADEIKEHLFF 295
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 1e-06
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 203
+ S + +K L E+ V + +P+V +LG+ TS + L
Sbjct: 46 LREATSPKANKEILD--------EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 97
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+ ++ Q+ + YL + HR + NVL+
Sbjct: 98 LDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-06
Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 13/169 (7%)
Query: 142 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 201
L + + + +F+R E + L H N+ + G++ T + V P
Sbjct: 44 LKPDVLSQPEAMDDFIR--------EVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPL 94
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261
+ Q+ + YL S HR + N+LL + I
Sbjct: 95 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
Query: 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
D L+ D + + S + D
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESLKTRTFSHASDTWM 199
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 7e-04
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 679 DCSKDIFSIGCLLAE-LHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEAC 733
+ D + G L E + + ++ L + G+ E+ P ++ C
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 251
Query: 734 ITKDWTRRPSAKSLLE 749
RP+ +L +
Sbjct: 252 WAHKPEDRPTFVALRD 267
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 50.2 bits (118), Expect = 1e-06
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 1467 SWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523
+ IA ++ + +++ + + H+G VT + AP+ + +V+ D+ +W
Sbjct: 20 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79
Query: 1524 LRRNWPSQPTVFKGHTN 1540
L+ V
Sbjct: 80 LKGRTWKPTLVILRINR 96
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.7 bits (101), Expect = 1e-04
Identities = 48/376 (12%), Positives = 95/376 (25%), Gaps = 45/376 (11%)
Query: 1267 AHHGAL----RSVAVGQDECTVFTAGIGPGFKGTVQKWELT--RINCVSGYYGHEEVVND 1320
A+H L A +D + V +E + + V H V
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNKWVQVHELKEHNGQVTG 56
Query: 1321 ICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1378
+ S RI +C D +VW + ++ + K G
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116
Query: 1379 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1438
+ D + + L + S+ + K ++
Sbjct: 117 RVISICY---FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
Query: 1439 ELGFPSLVSAICACGSEKMQAGGAVASPSWI------------AAGLSSGQCRLFDVRSG 1486
E+ + + + +S W+ A L D
Sbjct: 174 EVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 233
Query: 1487 NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS 1546
+A+ + + + + LV++ D ++ + + F G + S
Sbjct: 234 MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTY--DSAAGKLSFGGRLDVPKQSS 291
Query: 1547 VWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILP---- 1602
G N +S SA + + +S IS+L
Sbjct: 292 QRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKN------------SVSQISVLSGGKA 339
Query: 1603 FSRLFLVGTEDGYLRL 1618
F DG + +
Sbjct: 340 KCSQFCTTGMDGGMSI 355
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.8 bits (96), Expect = 5e-04
Identities = 21/200 (10%), Positives = 55/200 (27%), Gaps = 6/200 (3%)
Query: 1332 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1391
SCD ++++ ++ A S S + V + + S +
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 1392 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSAIC 1450
+ D + + + L I + + P + S +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDH-- 1508
G + + + + + + + H V++++
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA 339
Query: 1509 ---LLVSSSLDKTLRIWDLR 1525
++ +D + IWD+R
Sbjct: 340 KCSQFCTTGMDGGMSIWDVR 359
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.6 bits (116), Expect = 1e-06
Identities = 17/127 (13%), Positives = 34/127 (26%), Gaps = 1/127 (0%)
Query: 1398 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457
+ + + L + + F + + +
Sbjct: 159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218
Query: 1458 QAGGAVASPSWIAAGLSSGQCRLFDVRS-GNVIASWRAHDGYVTKLAAPEDHLLVSSSLD 1516
A +A G ++ V+ +I + AH V L LVSS D
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGAD 278
Query: 1517 KTLRIWD 1523
++ W+
Sbjct: 279 ACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.6 bits (98), Expect = 2e-04
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 10/69 (14%)
Query: 1485 SGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1544
V+ + H+ +T L + L+S S D + W ++ + H+N I
Sbjct: 2 HDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSS-------SMHQDHSNLIVS 51
Query: 1545 FSVWGQDVI 1553
Sbjct: 52 LDNSKAQEY 60
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.7 bits (93), Expect = 0.001
Identities = 31/284 (10%), Positives = 80/284 (28%), Gaps = 27/284 (9%)
Query: 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDI 1321
L +I H+ + ++ V + + + G + +W + S + H ++ +
Sbjct: 6 LKTISGHNKGITALTV----NPLISGS----YDGRIMEWSSS-----SMHQDHSNLIVSL 52
Query: 1322 CVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNS 1381
S + +S + + K + + + G + + + +
Sbjct: 53 DN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG 111
Query: 1382 NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1441
+ + V + G I + L +
Sbjct: 112 DII-----------KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 160
Query: 1442 FPSLVSAI-CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1500
+ S I + + AG + + + R+ + A
Sbjct: 161 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA 220
Query: 1501 KLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1544
E+ L+ + SLD + I+ ++R H +G++
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKII-KALNAHKDGVNN 263
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (117), Expect = 1e-06
Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K + FL+ E+ V LRH + + ++ + + +L +
Sbjct: 50 KPGTMSPEAFLQ--------EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDF 101
Query: 207 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
L+ + + Q+ S +AY+ + HR + +N+L+ ++
Sbjct: 102 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 150
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (110), Expect = 1e-05
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 672 YSKTFSKDCSKDIFSIGCLLAEL-HLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 727
+ D++S G LL EL R + + + +E G E P
Sbjct: 185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 244
Query: 728 ILVEACITKDWTRRPSAKSLLE--SPYFPST 756
L+ C K+ RP+ + L YF ST
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 2e-06
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 17/104 (16%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK---------------- 215
H N+ +LG G + Y L N L+ ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259
+ YQ+ +A+L S HR + N+LLT + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (117), Expect = 2e-06
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 22/130 (16%)
Query: 143 LIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG-------LITSV 195
L + K + E + F E+ + L+HPN+ +++ L+T +
Sbjct: 42 LQDRKLTKSERQRFKE--------EAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 93
Query: 196 IPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 253
+ TL+ L+ + +R Q+L + +LH+ I HR + N+ +T
Sbjct: 94 MTSG--TLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 149
Query: 254 SCWSWLYICD 263
S + I D
Sbjct: 150 PTGS-VKIGD 158
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (115), Expect = 3e-06
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 737
D+++ G + E+ + + + ++E CI ++
Sbjct: 194 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253
Query: 738 WTRRPSAKSLLESPYF 753
R S K LL +F
Sbjct: 254 KDERYSIKDLLNHAFF 269
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 2e-06
Identities = 23/116 (19%), Positives = 44/116 (37%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E S+ L HPN+ +L ++ T + V L+ + S ++ ++Q
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 282
LL +A+ HS + HR + P N+L+ L + + +
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 1e-04
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 31/139 (22%)
Query: 646 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 705
L V L +R + DI+S+GC+ AE+ RR LF S
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 706 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 734
L D V+ L R L+ +
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 735 TKDWTRRPSAKSLLESPYF 753
D +R SAK+ L P+F
Sbjct: 268 HYDPNKRISAKAALAHPFF 286
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 3e-06
Identities = 21/153 (13%), Positives = 45/153 (29%), Gaps = 23/153 (15%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQ--------------FSPNALKSE 217
HPN+ +LG + G + I P+ L + L+ S + S
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 218 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 277
+ + + YL HR + N+L+ ++ + ++
Sbjct: 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--------AKIADFGLSRGQE 178
Query: 278 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
+ +G + + + D S
Sbjct: 179 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 4e-06
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 638 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHL 696
++D L + E + + +L + +T D++S G LL E +
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 697 RRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749
P + ++ + VYL G E P ++ C RPS L+
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGL-LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
E + HPNV +LG+ L++ G V+P + + + +
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
Q+ + +L S HR + N +L + + + D
Sbjct: 138 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVAD 173
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 4e-06
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 203
+ S + FL+ E+ HP++ ++G++ + + + T L
Sbjct: 43 CKNCTSDSVREKFLQ--------EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL 94
Query: 204 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
+ LQ +L + YQL +A+AYL S HR + NVL++ +
Sbjct: 95 RSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 146
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.4 bits (113), Expect = 5e-06
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 1467 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT----KLAAPEDHLLVSSSLDKTLRIW 1522
A + R++DV + + W + + A + ++S SLD TL +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
Query: 1523 DL 1524
+L
Sbjct: 324 EL 325
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 5e-06
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E++V L +P + ++G+ + + + L LQ + + + ++ L++Q
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHV--KDKNIIELVHQ 115
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 285
+ + YL HR + NVLL ++ I D L + +
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAK--ISDFGLSKALRADENYYKAQTHGKW 172
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 1e-05
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 672 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 727
+ D++S G L+ E + + + + LE G+ G P
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 240
Query: 728 ILVEACITKDWTRRPSAKSL---LESPYF 753
L+ C T D RP ++ L + Y+
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYY 269
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 6e-06
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L HPN+ +L I+ V LE I++ + L H++ M L + Y
Sbjct: 57 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT-PSHIKAYMLMTLQGLEY 115
Query: 234 LHSLGIAHRSVCPSNVLLTDSCW 256
LH I HR + P+N+LL ++
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGV 138
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 4e-05
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 30/105 (28%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENG 713
D++++GC+LAEL LR P D SL Y+
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238
Query: 714 DLPG-----VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
PG + L++ + R +A L+ YF
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 6e-06
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L+H N+ + +L + +++ + S N V+ ++QLL + +
Sbjct: 58 LKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 293
HS + HR + P N+L+ + L +A IP +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------LARAFGIPVRCYSAEVVTLW-- 166
Query: 294 QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326
Y + +S W E
Sbjct: 167 ---YRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 3e-04
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 32/120 (26%)
Query: 666 WRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLEN------------ 712
+R S D++S GC+ AE + RPLF + L+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 713 -------------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
L V+ +L + R L++ + + +R SA+ L+ PYF
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 7e-06
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLI---TSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 230
++H NV +L + + + V T ++ ++ HV+FL+YQ+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSCWSW 258
+ Y+HS I HR + PSN+ + + C
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELK 161
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 0.002
Identities = 21/115 (18%), Positives = 33/115 (28%), Gaps = 33/115 (28%)
Query: 672 YSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------------------- 712
+ + DI+S+GC++AEL R LF L+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 713 --------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ V L+E + D +R +A L YF
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 8e-06
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL-----ENILQFSPNALKSEWH-- 219
E + L+H NV ++ + +T + + Y + ++ N L
Sbjct: 59 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 118
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 279
++ +M LL+ + Y+H I HR + +NVL+T L + D L S+A
Sbjct: 119 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPN 176
Query: 280 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
+ + L + +D
Sbjct: 177 RYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (94), Expect = 0.001
Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 40/132 (30%)
Query: 656 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDS---------ISL 706
++ Y+ L + Y D++ GC++AE+ R P+ IS
Sbjct: 183 VTLWYRPPELLLGERDYGP------PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 236
Query: 707 AVYLENGDLPGVMEELPSHTRI-------------------------LVEACITKDWTRR 741
++ ++ + ++ L++ + D +R
Sbjct: 237 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 296
Query: 742 PSAKSLLESPYF 753
+ L +F
Sbjct: 297 IDSDDALNHDFF 308
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.5 bits (111), Expect = 9e-06
Identities = 43/366 (11%), Positives = 103/366 (28%), Gaps = 69/366 (18%)
Query: 1256 KIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC------VS 1309
K+ + ++ +AH + SV+ + G ++ W+ ++
Sbjct: 1 KVFIATANAGKAHDADIFSVSACNS--FTVSCS----GDGYLKVWDNKLLDNENPKDKSY 54
Query: 1310 GYYGHEEVVNDICVLSSSGR-------IASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH 1360
++ H+ ++ + VL + R +A+ G L + + +D L
Sbjct: 55 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLD 114
Query: 1361 GGSPSSSI--------------------SKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1400
S T + + S L+ + L
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 174
Query: 1401 LH---------HIECVE-----RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446
V+ + G NG+++ +++ + L+ + + + + + +
Sbjct: 175 GTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 1447 SAICACGSEKMQAGGAVASPS-----WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1501
++ + A ++ + S AH +V
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 294
Query: 1502 LA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG------FSVWGQDVIS 1554
L+ L S+ D LR WD++ + T H + I G +
Sbjct: 295 LSFNDSGETLCSAGWDGKLRFWDVKTK--ERITTLNMHCDDIEIEEDILAVDEHGDSLAE 352
Query: 1555 ISNNKI 1560
+
Sbjct: 353 PGVFDV 358
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 9e-05
Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 1493 RAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP--TVFKGHTNGISGFSVWGQ 1550
+AHD + ++ + VS S D L++WD + P + + V
Sbjct: 11 KAHDADIFSVS-ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 1551 DVISISNNKIGLSSLSKSADEDGQHRL 1577
I ++ L + + G
Sbjct: 70 QAIERDAFELCLVA---TTSFSGDLLF 93
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 0.002
Identities = 21/189 (11%), Positives = 52/189 (27%), Gaps = 33/189 (17%)
Query: 1465 SPSWIAAGLSSGQCRLFDVRSGNV------IASWRAHDGYVTKLAA--------PEDHLL 1510
S+ + G +++D + + S H + + E L+
Sbjct: 23 CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 82
Query: 1511 VSSSLDKTLRIWDLRRN------WPSQPTVFKGHTNGISGFSV----------WGQDVIS 1554
++S L + + R + + S +++ + V +
Sbjct: 83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142
Query: 1555 ISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSS-ISILPFSR--LFLVGT 1611
+ ADE L + ++ S + + S L G
Sbjct: 143 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGF 202
Query: 1612 EDGYLRLCC 1620
+G +++
Sbjct: 203 NNGTVQISE 211
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.9 bits (109), Expect = 1e-05
Identities = 31/299 (10%), Positives = 77/299 (25%), Gaps = 38/299 (12%)
Query: 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVV 1318
SI H+ A+ +++ D T+F+A +G + W+++ + H ++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSAD----AEGHINSWDISTGISNRVFPDVHATMI 58
Query: 1319 NDICVLSSSGRIASCDGTLHVWNSQTGKLL-----------SVFAEQSMDSLHGGSPSSS 1367
I S G + S ++ + + ++
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 118
Query: 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1427
I G L +S A + + + V + S+ +
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 1428 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV-------------------ASPSW 1468
F + +
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 238
Query: 1469 IAAGLSSGQCRLFDVRSGN---VIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDL 1524
+A G ++++ + +I V + + +VS+ D ++ W++
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 45.4 bits (105), Expect = 4e-05
Identities = 37/283 (13%), Positives = 78/283 (27%), Gaps = 34/283 (12%)
Query: 1311 YYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAE-----------QSMD 1357
YGH + + + + + S +G ++ W+ TG VF + S
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 67
Query: 1358 SLHGGSPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413
L S + + G +N LSS L A + + +
Sbjct: 68 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH 127
Query: 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1473
+ + L + G S V G+ + V +
Sbjct: 128 GKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF 187
Query: 1474 SSGQCRLFDVRSGNVIASWRAHDG---------------YVTKLAAPEDHLLVSSSLDKT 1518
S+ L + + + +P++ L + SLD +
Sbjct: 188 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 247
Query: 1519 LRIWDLRRNWPSQPTVFKGHTNGISGFSVW--GQDVISISNNK 1559
+ +W++ + + H +W ++S +
Sbjct: 248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDS 290
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.6 bits (103), Expect = 5e-05
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 1486 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1544
G++ H+ +T L+ + + L S+ + + WD+ S H I+G
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI-STGISNRVFPDVHATMITG 60
Query: 1545 FSVWGQDVI 1553
+ +
Sbjct: 61 IKTTSKGDL 69
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
N L L+ + + L ++ + ++ +L +A
Sbjct: 58 IRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVA 117
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ GI H + NVL+++ ++I D
Sbjct: 118 KFYHRGIVHGDLSQYNVLVSE---EGIWIID 145
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (110), Expect = 1e-05
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEA 732
D++SIG + L F + L N + + +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 733 CITKDWTRRPSAKSLLESPYF 753
+ KD +R + + L+ P+
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWI 274
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 5/137 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
++HPNV + + + + ++ +L E + Q+L+ + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFLKQILNGVYY 128
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 293
LHSL IAH + P N++L D I + +A +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIK----IIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 294 QGLYADLKLSQSMDWHS 310
+ L D S
Sbjct: 185 PEIVNYEPLGLEADMWS 201
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 1e-05
Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 20/153 (13%)
Query: 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQF--------------SPNALKSE 217
+H N+ +LG G + ++ L LQ +P S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134
Query: 218 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 277
+ YQ+ + YL S HR + NVL+T+ + + T
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 278 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
+ +Y + D S
Sbjct: 195 TNGRLPVKWMAPEALFDRIY-----THQSDVWS 222
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 683 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 738
D++S G LL E L + + L L+ G + +++ C
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 278
Query: 739 TRRPSAKSLLE 749
++RP+ K L+E
Sbjct: 279 SQRPTFKQLVE 289
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 2e-05
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+ H+ +Q+ + +L S HR + N+LL++
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 171
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.0 bits (107), Expect = 2e-05
Identities = 32/270 (11%), Positives = 72/270 (26%), Gaps = 9/270 (3%)
Query: 1295 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1352
+V + + Y H S G + +W++
Sbjct: 38 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT----HI 93
Query: 1353 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412
++ + G + ++ + G + G L V
Sbjct: 94 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVD 153
Query: 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS--AICACGSEKMQAGGAVASPSWIA 1470
+ R I + + ++ G P + + + + A
Sbjct: 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI 213
Query: 1471 AGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS 1530
+ V + + + +P+ + S+S DKT++IW++
Sbjct: 214 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273
Query: 1531 QP-TVFKGHTNGISGFSVWGQDVISISNNK 1559
+ V + G Q ++SIS N
Sbjct: 274 KTIPVGTRIEDQQLGIIWTKQALVSISANG 303
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.5 bits (103), Expect = 6e-05
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 1467 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA--PEDHLLVSSSLDKTLRIWDL 1524
+ IA+ + ++++V + V + + LVS S + + +
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.0 bits (107), Expect = 2e-05
Identities = 8/58 (13%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 1487 NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTV-FKGHTNGI 1542
++ +A Y++ + P LL+ +S D +L ++ + + + + +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPL 59
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.5 bits (98), Expect = 3e-04
Identities = 25/311 (8%), Positives = 80/311 (25%), Gaps = 23/311 (7%)
Query: 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL---TRINCVSGYYGHEEVVNDICV 1323
A + + + + + + G++ ++ + + ++ +
Sbjct: 9 APKDYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 1324 LSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1383
+ ++ F + + + G + +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 1384 LSSGILSTAFDGNLYTCLHHIECV------------ERLVVGIGNGSLRFIDINQGQKLH 1431
+ L+ RL+VG+ N +++ + + +
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 1432 LWRGEPTELGFPSLVSAICACGSEKMQAG--GAVASPSWIAAGLSSGQCRLFDVRSGNVI 1489
E V+ + + G VA + G + F R +
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 1490 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW 1548
V + +P L ++ D + W+L+ + K + + + +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK-NFAKFNEDSVVKIACS 303
Query: 1549 GQDVISISNNK 1559
+ +++
Sbjct: 304 DNILCLATSDD 314
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.0 bits (94), Expect = 0.001
Identities = 38/323 (11%), Positives = 89/323 (27%), Gaps = 30/323 (9%)
Query: 1313 GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370
++ ++DI ++ S + DG+L V+ + SL P +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCNF 64
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
I+ + + + + L + E + G + I + +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
+ G ++ + K + + S + G+++ Q + F +
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 1491 SWRAHDGYVTK-----LAAPEDHLLVSSSLDKTLRIWDLRRNWP-----SQPTVFKGHTN 1540
G + L E SS+D + + + N
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 1541 GISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAK--NLSVLSSI 1598
+ + I S L + DG + + K N + +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAG----SDGIIS-----CWNLQTRKKIKNFAKFNED 295
Query: 1599 SILPFS---RLFLVGTEDGYLRL 1618
S++ + + + T D +
Sbjct: 296 SVVKIACSDNILCLATSDDTFKT 318
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.0 bits (105), Expect = 5e-05
Identities = 23/287 (8%), Positives = 64/287 (22%), Gaps = 29/287 (10%)
Query: 1266 RAHHGALRSVAVGQDECTVFTAGIGPG------FKGTVQKWELTRINCVSGYYGHEEVV- 1318
+ L G A V+ ++ ++ +
Sbjct: 61 HSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120
Query: 1319 ------NDICVLSSSGRIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369
+ I +SS + + + S +H G+ ++
Sbjct: 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYL 180
Query: 1370 KINTD----QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425
+ + + + + + + ++V S+ DI
Sbjct: 181 -GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIP 239
Query: 1426 QGQKLHLWRGEPTELGFPSLVSAIC----ACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1481
+ E G + + + + ++
Sbjct: 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299
Query: 1482 DVRSGNVIASWRAHDGYVTKLAAPED---HLLVSSSLDKTLRIWDLR 1525
G ++ + A +D +S+ + L I+D
Sbjct: 300 TASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.1 bits (103), Expect = 8e-05
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S + Q+ + +AYL HR + N L+ ++ + I D
Sbjct: 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM--VVKIAD 183
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.7 bits (102), Expect = 1e-04
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 672 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 727
D+++ G +L E + ++ + Y+ +G++ E P
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELY 272
Query: 728 ILVEACITKDWTRRPSAKSLLE 749
L+ C +K RPS S+
Sbjct: 273 NLMRLCWSKLPADRPSFCSIHR 294
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 43.6 bits (101), Expect = 1e-04
Identities = 37/330 (11%), Positives = 80/330 (24%), Gaps = 37/330 (11%)
Query: 1229 WFPTPAASWDG-------PDFLGRVGGLKDESPWKIKASILSSIR-AHHGALRSVAVGQD 1280
+ P P + DG F G + + L VG
Sbjct: 48 FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY 107
Query: 1281 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVW 1340
G T+ ++ + V + + + I
Sbjct: 108 PWMTSLTPDG----KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM 163
Query: 1341 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1400
+ + G L V + +T+ + ++ A+
Sbjct: 164 HCRDGSLAKV----------AFGTEGTPEITHTEVFHPEDEFLINHP----AYSQKAGRL 209
Query: 1401 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1460
+ + + + +G +F+ + G+ A +
Sbjct: 210 VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA-----DGWRPGGWQQVAYHRALDRIY 264
Query: 1461 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED---HLLVSSSLDK 1517
V +S + D ++G +A + + + +D L S+ DK
Sbjct: 265 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDK 323
Query: 1518 TLRIWDLRRNWPSQPTVFKGHTNGISGFSV 1547
TL I D + +G +
Sbjct: 324 TLYIHDAESGEELR--SVNQLGHGPQVITT 351
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.1 bits (100), Expect = 2e-04
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 206 ILQFSPNALKSEWHVRFLMYQLLSAIAYLH-SLGIAHRSVCPSNVLLTDSCWSWLYICDK 264
+++ + +V+ + QLL + Y+H GI H + P NVL+ +
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE----NL 168
Query: 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310
+ + + C S + D S
Sbjct: 169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 214
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 4e-04
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 144 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-T 202
+ AS +E FL E+SV +V +LG++ ++
Sbjct: 58 VNEAASMRERIEFLN--------EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 109
Query: 203 LENILQFSPNALK--------SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L++ L+ A+ S + + ++ +AYL++ HR + N ++ +
Sbjct: 110 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 169
Query: 255 CW 256
Sbjct: 170 FT 171
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 4e-04
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLEN--ILQFSPNALKSEWHVRFLMYQLLSAI 231
LRH N+ + + + E+ + + + + L S +
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 232 AYLHS--------LGIAHRSVCPSNVLLTDSCWSWLYICD 263
A+LH IAHR + N+L+ + I D
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIAD 151
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 6e-04
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 3/130 (2%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYT--LENILQFSPNALKSEWHVRF 222
+ E + C+ H N+ +L + + ++ L + +
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT-DSCWSWLYICDKPLVGFNSIADWCTIPTS 281
L+YQ+L I +LHS GI HR + PSN+++ D L G + + +
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 282 PMIGCCIEGC 291
I G
Sbjct: 184 YRAPEVILGM 193
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1620 | |||
| d1t77a1 | 304 | Lipopolysaccharide-responsive and beige-like ancho | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.96 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.95 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.93 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.92 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.92 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.91 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.89 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.89 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.88 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.88 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.88 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.87 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.8 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.8 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.76 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.75 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.65 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.63 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.61 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.61 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.49 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.21 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.2 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.16 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.16 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.14 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.13 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.12 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.11 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.11 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.1 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.07 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.07 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.06 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.06 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.06 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.04 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.04 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.02 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 98.95 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 98.95 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 98.86 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.67 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.65 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.65 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.65 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.64 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 98.62 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.61 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 98.53 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.47 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.45 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.33 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.24 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.23 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.81 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.78 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.75 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.67 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.51 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.51 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.48 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.4 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.29 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.86 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.44 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.44 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.21 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.87 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 95.8 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.68 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.6 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.42 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 95.26 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.07 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.06 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 94.82 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.58 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 94.09 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.63 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.69 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.26 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 89.11 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 82.2 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=538.53 Aligned_cols=236 Identities=33% Similarity=0.578 Sum_probs=207.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-CCCCCC-CCCCCCCCCCCCCCHHHHHCCCCC-CCCCC
Q ss_conf 322234323433537888630014599989886773235263-068898-998999787899327765015432-11114
Q 000355 309 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKSKWRLAKGDEQ-LDFTY 385 (1620)
Q Consensus 309 ~~~~d~W~~g~i~nf~yL~~ln~~~grs~~dl~~~pv~pwv~-d~~~~~-~~~~~~~~rdl~k~~~~~~~~~~~-~~~~~ 385 (1620)
...+++|+.|+||||+|||.||.++|||++|++||||||||+ ||.++. |++++..||||+||||++++.+.+ +...|
T Consensus 24 ~~~t~kW~~g~iSNfeYLm~LN~~sGRSf~D~~qYPIfPWVi~dy~s~~ldl~~~~~~RDLskpig~l~~~r~~~~~~~~ 103 (304)
T d1t77a1 24 SNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERY 103 (304)
T ss_dssp CSHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHH
T ss_conf 01999987579758999999999718888873327636745226776422456865512699822005988999999998
Q ss_pred ----CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC-C-CCCCCCCHHHHHHC------CCCCCCCCCCCCCC
Q ss_conf ----678989766856556430000122348647999975124-6-89994106887312------98873355765688
Q 000355 386 ----SSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV-Y-EPNEYPSTMQRLYQ------WTPDECIPEFYCDP 453 (1620)
Q Consensus 386 ----~~~~~p~~~~~~~~~~~~v~~y~~r~~p~~~l~~~~~~~-~-~~~~~~~~~~~~~~------~~~~eliPef~~~p 453 (1620)
.....++||+++|+++++|++||+|++||+++++.++++ | .+.+.+.++.+.++ .+++|||||||++|
T Consensus 104 ~~~~~~~~~~~~y~s~yS~~~~V~~~L~R~ePft~l~~~lq~g~fD~~~R~F~si~~~~~~~~~~~~d~~EliPEFf~~P 183 (304)
T d1t77a1 104 ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLP 183 (304)
T ss_dssp HHCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCG
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHCCH
T ss_conf 72124789876557777771689988833785368989861686668753503599999986156554100484230275
Q ss_pred CCCCCCC----------CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4443399----------999971049999997899999998525568874488840000234878344671399998899
Q 000355 454 QIFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSS 523 (1620)
Q Consensus 454 ~~~~~~~----------~~~~dv~lP~Wa~~~~~fi~~~r~aLEs~~Vs~~l~~WIDlifG~k~~g~~a~~~~nv~~~~~ 523 (1620)
|+|+|.| ..|+||+||+||++|++||++||+||||++||++||+||||||||||+|++|++|+|||+|.+
T Consensus 184 e~f~n~n~~~~g~~~~g~~v~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLiFG~kq~G~~A~~a~Nvf~p~~ 263 (304)
T d1t77a1 184 EMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLT 263 (304)
T ss_dssp GGGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGG
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 76520145543535688865654168766881999999999970437776766667764010357888897346455545
Q ss_pred CCCC------------------CCCCC--CCCCCCCCCCCC
Q ss_conf 9987------------------54677--564467888899
Q 000355 524 EPTK------------------PKSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 524 ~~~~------------------~~~~g--~~qlf~~pHp~r 544 (1620)
|+.. ...+| |.|||++|||+|
T Consensus 264 Y~~~~~~~~~~d~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 304 (304)
T d1t77a1 264 YEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304 (304)
T ss_dssp STTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
T ss_conf 46645510258989999999999977998134228999898
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=354.53 Aligned_cols=174 Identities=11% Similarity=0.113 Sum_probs=141.9
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33777236401565400799999943666644663089999812787770667989884089917588850248865513
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+.++|++++.||+|+||+||+|++. .+|..||+|++.... ......+. +|+.+|+.++|||||
T Consensus 23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~------~~g~~vAvK~i~~~~--~~~~~~~~--------~E~~il~~l~HpnIv 86 (350)
T d1koaa2 23 HVLDHYDIHEELGTGAFGVVHRVTER------ATGNNFAAKFVMTPH--ESDKETVR--------KEIQTMSVLRHPTLV 86 (350)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEET------TTTEEEEEEEECCCS--HHHHHHHH--------HHHHHHHHTCCTTBC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 78657589889840768199999988------999899999984524--31699999--------999999867997999
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 50069996997999972799-89898986299999999999999999999999999399130477999537557993379
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~i 259 (1620)
+++++|.+.+.+|+|||||+ |+|.+++.. ..+.+++..++.|++||+.||.|||+++|+||||||+|||++.+....+
T Consensus 87 ~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~v 165 (350)
T d1koaa2 87 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 165 (350)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCE
T ss_pred CEEEEEEECCEEEEEEECCCCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEE
T ss_conf 299999989999999985799889999976-2378999999999999999999997569760001546736416889869
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 99504786557877755588888855112366667542000000
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 260 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
||+|||+|+...... ......||+.|||||++
T Consensus 166 kL~DFG~a~~~~~~~------------~~~~~~gT~~Y~aPEv~ 197 (350)
T d1koaa2 166 KLIDFGLTAHLDPKQ------------SVKVTTGTAEFAAPEVA 197 (350)
T ss_dssp EECCCTTCEECCTTS------------CEEEECSCTTTCCHHHH
T ss_pred EEEECCHHEECCCCC------------CCCEECCCCCCCCHHHH
T ss_conf 995452104425654------------32000686242188997
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=358.26 Aligned_cols=173 Identities=18% Similarity=0.201 Sum_probs=144.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++. .+++.||+|.+..... .+....+. +|+.+|+.++|||||++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~-~~~~~~~~--------~Ei~~l~~l~HpnIv~~ 68 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRA-VDCPENIK--------KEICINKMLNHENVVKF 68 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECC--------CHH--------HHHHHHHTCCCTTBCCE
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHC-CHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 746089989721748099999999------9997999999845664-12799999--------99999985799888469
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+++.+|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 69 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~--~~KL 144 (271)
T d1nvra_ 69 YGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 144 (271)
T ss_dssp EEEEEETTEEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEE
T ss_pred EEEECCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 654046743679886458980899975--379999999999999999999999975983575468997887899--8798
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 504786557877755588888855112366667542000000
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
+|||+|+......... ......||+.|||||++
T Consensus 145 ~DFG~a~~~~~~~~~~---------~~~~~~GT~~Y~APE~~ 177 (271)
T d1nvra_ 145 SDFGLATVFRYNNRER---------LLNKMCGTLPYVAPELL 177 (271)
T ss_dssp CCCTTCEECEETTEEC---------CBCCCCSCGGGSCTHHH
T ss_pred CCCHHHEEECCCCCCC---------CCCCEEECCCCCCHHHH
T ss_conf 3231422404688653---------11132557474287286
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=355.96 Aligned_cols=172 Identities=17% Similarity=0.155 Sum_probs=143.7
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHH-HHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706-679898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
+++|++++.||+|+||.||+|+++ .++..||+|++.+...... ....+. +|+.+|+.++||||++
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~------~~~~~~AiK~i~k~~~~~~~~~~~~~--------~E~~il~~l~hp~Iv~ 69 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTA 69 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHSCCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 474289889831768499999998------99989999998156544979999999--------9999998679998877
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0069996997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++|++.+.+|+|||||+ |+|.+++. ..+.+++..++.|++|++.||.|||+++|+||||||+|||++.+| .+|
T Consensus 70 l~~~~~~~~~~~iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g--~vk 145 (337)
T d1o6la_ 70 LKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145 (337)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEE
T ss_pred EEEEECCCCCCCCCEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEE
T ss_conf 8764035642111000357986055553--256775999999999996521134315962246477784765899--888
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 9504786557877755588888855112366667542000000
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
|+|||+|+........ .....||+.|||||++
T Consensus 146 l~DFG~a~~~~~~~~~-----------~~~~~GT~~Y~aPE~~ 177 (337)
T d1o6la_ 146 ITDFGLCKEGISDGAT-----------MKTFCGTPEYLAPEVL 177 (337)
T ss_dssp ECCCTTCBCSCCTTCC-----------BCCCEECGGGCCGGGG
T ss_pred EEECCCCCCCCCCCCC-----------CCCCEECHHHHHHHHC
T ss_conf 8205652003567862-----------0551008899666650
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=0 Score=346.54 Aligned_cols=152 Identities=14% Similarity=0.078 Sum_probs=130.3
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37772364015654007999999436666446630899998127877706679898840899175888502488655135
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
+.++|++++.||+|+||+||+|++. .+++.||+|.+.... ......+. +|+.+|+.++|||||+
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~--~~~~~~~~--------~Ei~il~~l~HpnIv~ 90 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEK------ATGRVFVAKFINTPY--PLDKYTVK--------NEISIMNQLHHPKLIN 90 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCS--HHHHHHHH--------HHHHHHTTCCSTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 5403599899931778299999998------999799999988726--46799999--------9999998679979891
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0069996997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++|.+++.+|+|||||+ |+|.+.+.. ....+++..++.+++||+.||.|||++||+||||||+|||++......+|
T Consensus 91 ~~~~~~~~~~~~ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vk 169 (352)
T d1koba_ 91 LHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 169 (352)
T ss_dssp EEEEEECSSEEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEE
T ss_pred EEEEEEECCEEEEEEECCCCCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEE
T ss_conf 99999989999999982899808888986-38998999999999999999999997792651314455311346788489
Q ss_pred EEECCCCCCC
Q ss_conf 9504786557
Q 000355 261 ICDKPLVGFN 270 (1620)
Q Consensus 261 I~DFGlar~~ 270 (1620)
|+|||+|+..
T Consensus 170 L~DFGla~~~ 179 (352)
T d1koba_ 170 IIDFGLATKL 179 (352)
T ss_dssp ECCCTTCEEC
T ss_pred EEECCCCEEC
T ss_conf 9525630343
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=356.89 Aligned_cols=194 Identities=16% Similarity=0.160 Sum_probs=164.5
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++ ..+++.||+|+++... ......++. +|+.+|+.++|||||++
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~------~~~~~~vAiK~i~~~~-~~~~~~~~~--------~Ei~il~~l~HpnIv~l 69 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSH------KPSGLVMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 69 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEE------TTTTEEEEEEEEECCC-CTTHHHHHH--------HHGGGGGGCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEE------CCCCCEEEEEEECHHH-CHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 56888978971277809999999------8999699999987540-978999999--------99999986799999949
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0699969979999727998-98989862999999999999999999999999993-991304779995375579933799
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++|.+.+.+|+||||++| +|.+++. +.+.+++..++.++.|++.||.|||+ ++|+||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~iVmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~--~vk 145 (322)
T d1s9ja_ 70 YGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 145 (322)
T ss_dssp EEEEECSSEEEEEEECCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC--CEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEE
T ss_conf 999998999999997679986899874--2499999999999999999999999859997144577994687899--899
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 950478655787775558888885511236666754200000025555322234323433537888630
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL~~l 329 (1620)
|+|||+|+...... .....||+.|||||++.+..|+..+|+|+.|++. |+.+++.
T Consensus 146 l~DFGla~~~~~~~-------------~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil-~ell~G~ 200 (322)
T d1s9ja_ 146 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL-VEMAVGR 200 (322)
T ss_dssp ECCCCCCHHHHHHT-------------C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHH-HHHHHSS
T ss_pred EEECCCCCCCCCCC-------------CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH-HHHHHCC
T ss_conf 95487762567886-------------2111377141194687589989488899899999-9999888
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=351.10 Aligned_cols=169 Identities=12% Similarity=0.067 Sum_probs=140.5
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|.+. .+|+.||+|++...... ..+.+. +|+.+|+.++|||||++
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~~~~~~~~--~~~~~~--------~E~~il~~l~HpnIv~~ 82 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPNIVNY 82 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBT------TTCCEEEEEEEEGGGCS--CHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEEECCCCH--HHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 105388789812858299999998------99989999998430172--799999--------99999986799988058
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
+++|.+.+.+|+|||||+| +|.+++.. ..+++..++.|++|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 83 ~~~~~~~~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~vkl 157 (293)
T d1yhwa1 83 LDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 157 (293)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 5779889998999970379808988641---5999999999999999999999987972267768886887899--6864
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 504786557877755588888855112366667542000000
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
+|||+|+....... ......||+.|||||++
T Consensus 158 ~DFG~a~~~~~~~~-----------~~~~~~gt~~Y~aPE~~ 188 (293)
T d1yhwa1 158 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVV 188 (293)
T ss_dssp CCCTTCEECCSTTC-----------CBCCCCSCGGGCCHHHH
T ss_pred CCCHHHEEECCCCC-----------CCCCCCCCCCCCCHHHH
T ss_conf 25156413213666-----------44444447773682664
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=353.98 Aligned_cols=171 Identities=18% Similarity=0.180 Sum_probs=143.0
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHH-HHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 3777236401565400799999943666644663089999812787770667-989884089917588850248865513
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
..++|++++.||+|+||+||+|++. .+++.||+|.+.+........ ..+. +|+.+|+.++|||||
T Consensus 4 ~l~dy~i~~~iG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv 69 (263)
T d2j4za1 4 ALEDFEIGRPLGKGKFGNVYLAREK------QSKFILALKVLFKAQLEKAGVEHQLR--------REVEIQSHLRHPNIL 69 (263)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHTCCCTTBC
T ss_pred CHHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 1537699889851778589999998------99949999998168856768999999--------999999856888888
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 50069996997999972799-89898986299999999999999999999999999399130477999537557993379
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~i 259 (1620)
++++++.+++.+|+|||||+ |+|.+++. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+
T Consensus 70 ~~~~~~~~~~~~~ivmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~~ 145 (263)
T d2j4za1 70 RLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--EL 145 (263)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CE
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCC--CE
T ss_conf 59999998999899985047985898875--048999999999999999999999988946522023441466899--87
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 99504786557877755588888855112366667542000000
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 260 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
||+|||+|+...... .....||+.|||||++
T Consensus 146 kl~DFG~a~~~~~~~-------------~~~~~Gt~~Y~APE~~ 176 (263)
T d2j4za1 146 KIADFGWSVHAPSSR-------------RTTLCGTLDYLPPEMI 176 (263)
T ss_dssp EECCCCSCSCCCCCC-------------CEETTEEGGGCCHHHH
T ss_pred EECCCCEEEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 115556335448885-------------2355788763499997
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=346.86 Aligned_cols=169 Identities=15% Similarity=0.118 Sum_probs=142.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHH-HHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706-679898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
...|+.++.||+|+||+||+|++. .++..||||.+........ ....+. +|+.+|+.++|||||+
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~ 79 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEECCSSCHHHHHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 785676279701888099999998------99939999998444435889999999--------9999999778999823
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 00699969979999727998-98989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++++.+++.+|+|||||+| +|..++. ..+.+++..++.+++|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 80 ~~~~~~~~~~~~iv~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~~K 155 (309)
T d1u5ra_ 80 YRGCYLREHTAWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVK 155 (309)
T ss_dssp EEEEEEETTEEEEEEECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--EEE
T ss_pred EEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCC--CEE
T ss_conf 8999998998899998069994578997--379999999999999999999999868976667884217987999--789
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 95047865578777555888888551123666675420000002
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
|+|||+|+..... ....||+.|||||++.
T Consensus 156 l~DFG~a~~~~~~---------------~~~~GT~~Y~APE~~~ 184 (309)
T d1u5ra_ 156 LGDFGSASIMAPA---------------NSFVGTPYWMAPEVIL 184 (309)
T ss_dssp ECCCTTCBSSSSB---------------CCCCSCGGGCCHHHHT
T ss_pred EEECCCCCCCCCC---------------CCCCCCCCCCCHHHHH
T ss_conf 8443653346778---------------7313476636889983
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.87 Aligned_cols=171 Identities=16% Similarity=0.161 Sum_probs=141.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.+.|++++.||+|+||+||+|++. .++..||+|.+.... ....+.+. +|+++|+.++|||||++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~--~~~~~~~~--------~E~~il~~l~HpnIv~l 74 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNK------ETSVLAAAKVIDTKS--EEELEDYM--------VEIDILASCDHPNIVKL 74 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECSS--SGGGGGTH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEEC------CCCEEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 037598479930778199999999------999399999987289--99999999--------99999986799998849
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+++.+|+|||||+| +|.+++.. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~~~~~lvmEy~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~--~~Kl 151 (288)
T d2jfla1 75 LDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKL 151 (288)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCC--CEEE
T ss_conf 8898009958999962799818899986-289999999999999999999999988988714070031487899--9899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 504786557877755588888855112366667542000000
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
+|||+|+....... ....+.||+.|||||++
T Consensus 152 ~DFG~a~~~~~~~~-----------~~~~~~Gt~~y~APE~l 182 (288)
T d2jfla1 152 ADFGVSAKNTRTIQ-----------RRDSFIGTPYWMAPEVV 182 (288)
T ss_dssp CCCTTCEECHHHHH-----------HHTCCCSCCTTCCHHHH
T ss_pred EECHHHHCCCCCCC-----------CCCCCCCCCCCCCHHHH
T ss_conf 71612303577864-----------10010256264799998
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=347.61 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=141.4
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 377723640156540079999994366664466308999981278777066-7989884089917588850248865513
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+++|++++.||+|+||.||+|++. .+|+.||+|.+.+....... ...+.++. +|+.+++.++|||||
T Consensus 2 slddy~i~~~lG~G~fg~Vy~~~~~------~t~~~vAiK~i~~~~~~~~~~~~~~~~e~-----~~~~~l~~~~hpnIv 70 (364)
T d1omwa3 2 TMNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNER-----IMLSLVSTGDCPFIV 70 (364)
T ss_dssp CSTTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHHTCHHHHHHHH-----HHHHHHSSSCCTTBC
T ss_pred CHHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHHHHHH-----HHHHHHHCCCCCCEE
T ss_conf 7776851018842889099999999------99979999998458754266799999999-----999998508998588
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 50069996997999972799-89898986299999999999999999999999999399130477999537557993379
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~i 259 (1620)
+++++|.+.+.+|+||||++ |+|.+++. ....+++..++.|+.||+.||.|||+++|+||||||+|||++.++ .+
T Consensus 71 ~l~~~~~~~~~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g--~i 146 (364)
T d1omwa3 71 CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HV 146 (364)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS--CE
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCC--CE
T ss_conf 99999998998899999148983899987--325532789999999999999999977962204442216785889--67
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 99504786557877755588888855112366667542000000
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 260 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
||+|||+|+...... .....||+.|||||++
T Consensus 147 Kl~DFGla~~~~~~~-------------~~~~~GT~~y~APE~~ 177 (364)
T d1omwa3 147 RISDLGLACDFSKKK-------------PHASVGTHGYMAPEVL 177 (364)
T ss_dssp EECCCTTCEECSSSC-------------CCSCCSCGGGCCHHHH
T ss_pred EEEEECEEEECCCCC-------------CCCCCCCCCCCHHHHH
T ss_conf 982201023337886-------------4331134554216876
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=350.87 Aligned_cols=174 Identities=18% Similarity=0.145 Sum_probs=142.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 77723640156540079999994366664466308999981278777066-79898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
.++|++++.||+|+||+||+|++. .+++.||||.+......... ...+. +|+.+|+.++|||||+
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~ 72 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLAREL------ATSREYAIKILEKRHIIKENKVPYVT--------RERDVMSRLDHPFFVK 72 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHHCCSTTBCC
T ss_pred CCCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 987789889850879099999998------99979999998657755777899999--------9999998768888617
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 00699969979999727998-98989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++|.+++.+|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 73 l~~~~~~~~~~~ivmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~--~vk 148 (288)
T d1uu3a_ 73 LYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQ 148 (288)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC--EEE
T ss_conf 9999998998899997048987777653--159999999999999999999762165088476774123668885--388
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 9504786557877755588888855112366667542000000
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
|+|||+|+......... ......||+.|||||++
T Consensus 149 l~DFG~a~~~~~~~~~~---------~~~~~~GT~~Y~APE~~ 182 (288)
T d1uu3a_ 149 ITDFGTAKVLSPESKQA---------RANSFVGTAQYVSPELL 182 (288)
T ss_dssp ECCCTTCEECC-------------------CCCCGGGCCHHHH
T ss_pred ECCCCCCEECCCCCCCC---------CCCCCCCCCCCCCCEEE
T ss_conf 60321024225677643---------33555677552584400
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=351.53 Aligned_cols=192 Identities=20% Similarity=0.241 Sum_probs=151.3
Q ss_pred EEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH---HHHHHHHCCCCCHHHHHHHCCCCCCCCCCEE
Q ss_conf 3640156540079999994366664466308999981278777066---7989884089917588850248865513500
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~---~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l~ 183 (1620)
+.++.||+|+||+||+|++. .+++.||||++......... ...+. +|+.+|+.++|||||+++
T Consensus 1 E~l~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv~~~ 66 (299)
T d1ua2a_ 1 EKLDFLGEGQFATVYKARDK------NTNQIVAIKKIKLGHRSEAKDGINRTAL--------REIKLLQELSHPNIIGLL 66 (299)
T ss_dssp CEEEEEEEETTEEEEEEECS------SCCSEEEEEEC------------CTHHH--------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEECCCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHHHHHHHHHHH--------HHHHHHHHCCCCCEEEEE
T ss_conf 95638512728299999999------9996999999842021245679999999--------999999867999986898
Q ss_pred EEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEE
Q ss_conf 69996997999972799898989862999999999999999999999999993991304779995375579933799950
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI~D 263 (1620)
++|.+++.+|+||||++|++...+.. ....+++..++.+++||+.||.|||+++|+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~--~~KL~D 143 (299)
T d1ua2a_ 67 DAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLAD 143 (299)
T ss_dssp EEECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECC
T ss_pred EEECCCCCEEEHHHHHCCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC--CCCCCC
T ss_conf 54225874022045534507765541-266778999999999999999886316355035776258853778--411465
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 47865578777555888888551123666675420000002-55553222343234335378886
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 264 FGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~~d~W~~g~i~nf~yL~ 327 (1620)
||+|+........ .....||+.|||||++. ...|+..+|+|+.|++. |+.++
T Consensus 144 FG~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil-~el~~ 196 (299)
T d1ua2a_ 144 FGLAKSFGSPNRA-----------YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL-AELLL 196 (299)
T ss_dssp CGGGSTTTSCCCC-----------CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH-HHHHH
T ss_pred CCCCCCCCCCCCC-----------CCCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHHH-HHHHH
T ss_conf 7610005787554-----------33020473336399972677888056436304289-99985
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=346.22 Aligned_cols=172 Identities=19% Similarity=0.263 Sum_probs=140.9
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33777236401565400799999943666644663089999812787770667989884089917588850248865513
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+.+.|++++.||+|+||+||+|++. .+++.||+|.+....... ....+. +|+.+|+.++|||||
T Consensus 6 di~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~-~~~~~~--------~Ei~il~~l~HpnIv 70 (307)
T d1a06a_ 6 DIRDIYDFRDVLGTGAFSEVILAEDK------RTQKLVAIKCIAKKALEG-KEGSME--------NEIAVLHKIKHPNIV 70 (307)
T ss_dssp CGGGTEEEEEESBSGGGGGEEEEEET------TTCCEEEEEEEEC-----------C--------HHHHHHHTCCCTTBC
T ss_pred CCCCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHHHH-HHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 77666699889940658399999999------999899999981577312-899999--------999999867998999
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC---CCC
Q ss_conf 50069996997999972799-89898986299999999999999999999999999399130477999537557---993
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD---SCW 256 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~---~~~ 256 (1620)
+++++|.+++.+|+|||||+ |+|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||+.. ++
T Consensus 71 ~l~~~~~~~~~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~- 147 (307)
T d1a06a_ 71 ALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS- 147 (307)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC-
T ss_pred CEEEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCC-
T ss_conf 19899998998889885268984888653--036788789999999999998752413055687046300110468882-
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 37999504786557877755588888855112366667542000000
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
.+||+|||+|+....... .....||+.|||||++
T Consensus 148 -~vkl~DFG~a~~~~~~~~------------~~~~~GT~~y~APE~~ 181 (307)
T d1a06a_ 148 -KIMISDFGLSKMEDPGSV------------LSTACGTPGYVAPEVL 181 (307)
T ss_dssp -CEEECCC------------------------------CTTSCHHHH
T ss_pred -EEEEECCCEEEECCCCCE------------EEEEEECCCCCCCHHH
T ss_conf -499831543587258970------------4400328422591887
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=345.02 Aligned_cols=192 Identities=17% Similarity=0.193 Sum_probs=156.2
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
+++|++++.||+|+||+||+|.+. .+++.||+|+++..........++. +|+.+|+.++|||||++
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~Hp~Iv~~ 66 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKL 66 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEC-------CCHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEECCEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999776517723768099999999------9997999999802225758999999--------99999986799838874
Q ss_pred EEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEE
Q ss_conf 06999699799997279989898986299999999999999999999999999399130477999537557993379995
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI~ 262 (1620)
+++|.+++.+|+||||+.+++.+++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~--~~kl~ 144 (298)
T d1gz8a_ 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLA 144 (298)
T ss_dssp EEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCC--CCEEC
T ss_conf 4533224320378862377445554420256888899999999999999986528899213571140113467--62103
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 0478655787775558888885511236666754200000025555-3222343234335
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~~d~W~~g~i~ 321 (1620)
|||+|+....... ......||+.|+|||++....+ +..+|.|+.|++.
T Consensus 145 DFG~a~~~~~~~~-----------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvil 193 (298)
T d1gz8a_ 145 DFGLARAFGVPVR-----------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 193 (298)
T ss_dssp STTHHHHHCCCSB-----------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred CCCCCEECCCCCC-----------CCEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHH
T ss_conf 5786134368864-----------100103652154112213665777422103333134
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=346.79 Aligned_cols=169 Identities=17% Similarity=0.142 Sum_probs=142.6
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHH-HHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706-679898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
+++|++++.||+|+||+||+|++. .+|+.||||.+.+...... ....++ +|+.+|+.++|||||+
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~------~~g~~~AvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~ 105 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHK------ESGNHYAMKILDKQKVVKLKQIEHTL--------NEKRILQAVNFPFLVK 105 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 237089889611768089999998------99989999998267745889999999--------9999999748772740
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0069996997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++++.+...+++||||+. |+|..++. ..+.+++..++.|+.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g--~ik 181 (350)
T d1rdqe_ 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181 (350)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCC--CEE
T ss_conf 3444432222232222334662266675--158989999999999999989999859986176799993607789--788
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 9504786557877755588888855112366667542000000
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
|+|||+|+..... .....||+.|||||++
T Consensus 182 L~DFG~a~~~~~~--------------~~~~~Gt~~Y~APE~~ 210 (350)
T d1rdqe_ 182 VTDFGFAKRVKGR--------------TWTLCGTPEALAPEII 210 (350)
T ss_dssp ECCCTTCEECSSC--------------BCCCEECGGGCCHHHH
T ss_pred EEECEEEEECCCC--------------CCCCCCCCCCCCHHHH
T ss_conf 6101033322566--------------6433676356788997
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=344.58 Aligned_cols=169 Identities=16% Similarity=0.176 Sum_probs=142.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHH-HHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706-679898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
+++|++++.||+|+||+||+|++. .+|+.||+|++.+...... ....+. +|+.+|+.++|||||+
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~ 68 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSR------HNGRYYAMKVLKKEIVVRLKQVEHTN--------DERLMLSIVTHPFIIR 68 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHSCCBTTBCC
T ss_pred HHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCHHH
T ss_conf 547088889720768089999998------99979999998457754889999999--------9999998636967533
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 00699969979999727998-98989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++++.+.+.+|+||||++| +|..++. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~~ivmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g--~vk 144 (316)
T d1fota_ 69 MWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIK 144 (316)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEEECCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCC--CEE
T ss_conf 0356852880056765037863223432--222111007999999998765541247677055681050386899--889
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 9504786557877755588888855112366667542000000
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
|+|||+|+..... .....||+.|||||++
T Consensus 145 L~DFG~a~~~~~~--------------~~~~~Gt~~Y~APE~l 173 (316)
T d1fota_ 145 ITDFGFAKYVPDV--------------TYTLCGTPDYIAPEVV 173 (316)
T ss_dssp ECCCSSCEECSSC--------------BCCCCSCTTTCCHHHH
T ss_pred EECCCCCEEECCC--------------CCCCCCCCCCCCHHHH
T ss_conf 8317521671245--------------6434576343599998
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=340.92 Aligned_cols=177 Identities=15% Similarity=0.176 Sum_probs=142.0
Q ss_pred CCCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHH----HHHHHHHHCCCCCHHHHHHHCCC
Q ss_conf 23337772364015654007999999436666446630899998127877706----67989884089917588850248
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ----ESKNFLRLIGVPSFDESSVPGCL 174 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~----~~~~~~~~~~~~~~~Ei~iL~~L 174 (1620)
...+.++|++++.||+|+||+||+|++. .+|+.||||.+.+...... ....+. +|+.+|+.+
T Consensus 5 ~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~--------~E~~il~~l 70 (293)
T d1jksa_ 5 QENVDDYYDTGEELGSGQFAVVKKCREK------STGLQYAAKFIKKRRTKSSRRGVSREDIE--------REVSILKEI 70 (293)
T ss_dssp CSCGGGTEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEBCSSTTCSSSBCHHHHH--------HHHHHHHHC
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHHHHH--------HHHHHHHHC
T ss_conf 7885567798279811789599999999------99989999998756632134068999999--------999999867
Q ss_pred CCCCCCCEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 86551350069996997999972799-89898986299999999999999999999999999399130477999537557
Q 000355 175 RHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 175 ~HpNIv~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~ 253 (1620)
+|||||+++++|.+.+.+|+|||||+ |+|.+++. ..+.+++..++.+++|++.||.|||+++|+||||||+|||++.
T Consensus 71 ~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~--~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~ 148 (293)
T d1jksa_ 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148 (293)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred CCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEC
T ss_conf 99899938899997998999998677864310010--3564215578999999999987666254221133301279825
Q ss_pred CCC--EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 993--37999504786557877755588888855112366667542000000
Q 000355 254 SCW--SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 254 ~~~--~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
++. ..+||+|||+|+....... .....||+.|||||++
T Consensus 149 ~~~~~~~vkl~DfG~a~~~~~~~~------------~~~~~~t~~y~APE~~ 188 (293)
T d1jksa_ 149 RNVPKPRIKIIDFGLAHKIDFGNE------------FKNIFGTPEFVAPEIV 188 (293)
T ss_dssp SSSSSCCEEECCCTTCEECTTSCB------------CSCCCCCGGGCCHHHH
T ss_pred CCCCCCCEEECCHHHHHHCCCCCC------------CCCCCCCCCCCCHHHH
T ss_conf 898666469643344210577763------------1224777743099998
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=342.11 Aligned_cols=174 Identities=18% Similarity=0.153 Sum_probs=141.5
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++. .+|+.||+|.+............+. +|+++|+.++|||||++
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~ 68 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRK------SDGKILVWKELDYGSMTEAEKQMLV--------SEVNLLRELKHPNIVRY 68 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEECCTTSCHHHHHHHH--------HHHHHTTSCCCTTBCCE
T ss_pred CHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 333799679830889199999999------9997999999874657979999999--------99999997789998248
Q ss_pred EEEEEE--CCEEEEEEECCCC-CHHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCCCEEEC
Q ss_conf 069996--9979999727998-989898629--9999999999999999999999999399-----13047799953755
Q 000355 183 LGLLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~~~~--~~~~~LV~E~~~g-sL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~~-----IiHRDLKp~NILi~ 252 (1620)
++++.+ .+.+|+|||||+| +|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+|||++
T Consensus 69 ~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~ 148 (269)
T d2java1 69 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148 (269)
T ss_dssp EEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC
T ss_pred EEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCC
T ss_conf 99999178998999995689993899998515457899999999999999999999997167788788586765425747
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 799337999504786557877755588888855112366667542000000
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 253 ~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
.++ .+||+|||+|+....... ......||+.|||||++
T Consensus 149 ~~~--~vkl~DFG~a~~~~~~~~-----------~~~~~~gt~~Y~APE~l 186 (269)
T d2java1 149 GKQ--NVKLGDFGLARILNHDTS-----------FAKAFVGTPYYMSPEQM 186 (269)
T ss_dssp TTS--CEEECCHHHHHHC----------------------CCCSCCCHHHH
T ss_pred CCC--CEEEEECCCEEECCCCCC-----------CCCCCCCCCCCCCHHHH
T ss_conf 888--579800100032245777-----------55667788232799998
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=335.04 Aligned_cols=167 Identities=20% Similarity=0.174 Sum_probs=136.5
Q ss_pred EEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 23640156540079999994366664466308999981278777066798988408991758885024886551350069
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l~~~ 185 (1620)
|+..++||+|+||+||+|++. .++..||+|.+............+. +|+++|+.++|||||+++++
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~------~~~~~va~K~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~~~~ 76 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDT------ETTVEVAWCELQDRKLTKSERQRFK--------EEAEMLKGLQHPNIVRFYDS 76 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEGGGSCHHHHHHHH--------HHHHHHTTCCCTTBCCEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEC------CCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEEEEE
T ss_conf 885169700828499999999------9995999999851227989999999--------99999985799985069999
Q ss_pred EEE----CCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEECC-CCCE
Q ss_conf 996----9979999727998-9898986299999999999999999999999999399--130477999537557-9933
Q 000355 186 LKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD-SCWS 257 (1620)
Q Consensus 186 ~~~----~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~--IiHRDLKp~NILi~~-~~~~ 257 (1620)
+++ ...+|+||||++| +|.+++. ....+++..++.++.|++.||.|||+++ |+||||||+|||++. ++
T Consensus 77 ~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~-- 152 (270)
T d1t4ha_ 77 WESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG-- 152 (270)
T ss_dssp EEEESSSCEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTS--
T ss_pred EEECCCCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCCC--
T ss_conf 8403345888999995789894899975--135546999999999999999999978997996876743511667999--
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 7999504786557877755588888855112366667542000000
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 258 ~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
.+||+|||+|+...... .....||+.|||||++
T Consensus 153 ~~Kl~DFGla~~~~~~~-------------~~~~~GT~~Y~aPE~~ 185 (270)
T d1t4ha_ 153 SVKIGDLGLATLKRASF-------------AKAVIGTPEFMAPEMY 185 (270)
T ss_dssp CEEECCTTGGGGCCTTS-------------BEESCSSCCCCCGGGG
T ss_pred CEEEEECCCCEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 88980057654236876-------------6775538130089884
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=334.78 Aligned_cols=193 Identities=20% Similarity=0.291 Sum_probs=156.5
Q ss_pred CCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 33377723640156540079999994366664466308999981278777066798988408991758885024886551
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 179 (1620)
+...++|++++.||+|+||+||+|.+. .+++.||||+++...........+. +|+.+|+.++||||
T Consensus 14 ~~~~~~Y~~i~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpni 79 (346)
T d1cm8a_ 14 WEVRAVYRDLQPVGSGAYGAVCSAVDG------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMRHENV 79 (346)
T ss_dssp ECCBSSEEEEEEC------CEEEEEET------TTCCEEEEEECSSTTSSHHHHHHHH--------HHHHHHHHCCBTTB
T ss_pred EECCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCE
T ss_conf 344771899889801778199999999------9998999999852225969999999--------99999986689875
Q ss_pred CCEEEEEEECC------EEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 35006999699------799997279989898986299999999999999999999999999399130477999537557
Q 000355 180 APVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 180 v~l~~~~~~~~------~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~ 253 (1620)
|+++++|...+ .+|+||||++++|..+++ ...+++..++.+++|++.||.|||++||+||||||+|||++.
T Consensus 80 v~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~ 156 (346)
T d1cm8a_ 80 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE 156 (346)
T ss_dssp CCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
T ss_conf 47999863576555541599998405521899987---402269999999999999999987378764566851111210
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC-CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9933799950478655787775558888885511236666754200000025-555322234323433537888
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~~d~W~~g~i~nf~yL 326 (1620)
++ .+|++|||+|+..... .....||+.|||||++.+ ..++..+|+|+.|++. |+.+
T Consensus 157 ~~--~~kl~Dfg~a~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil-~ell 213 (346)
T d1cm8a_ 157 DC--ELKILDFGLARQADSE--------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM-AEMI 213 (346)
T ss_dssp TC--CEEECCCTTCEECCSS--------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH-HHHH
T ss_pred CC--CCCCCCCCCEECCCCC--------------CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHH-HHHH
T ss_conf 01--2211343102206876--------------31024553335889981787899650103003899-9999
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=338.48 Aligned_cols=151 Identities=13% Similarity=0.086 Sum_probs=131.1
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33777236401565400799999943666644663089999812787770667989884089917588850248865513
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+.++|++++.||+|+||+||+|.+. .+++.||+|.++... .....+. +|+++|+.++|||||
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~------~~~~~~AiK~i~~~~---~~~~~~~--------~Ei~il~~l~HpnIv 64 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVET------SSKKTYMAKFVKVKG---TDQVLVK--------KEISILNIARHRNIL 64 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECCCT---HHHHHHH--------HHHHHHHHSCCTTBC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC---CCHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 87010588789831778399999998------999699999975786---6599999--------999999857997989
Q ss_pred CEEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 500699969979999727998-9898986299999999999999999999999999399130477999537557993379
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~i 259 (1620)
+++++|++.+.+|+|||||+| +|.+++.. ....+++..++.|+.||+.||.|||+++|+||||||+|||++.++...+
T Consensus 65 ~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~i 143 (321)
T d1tkia_ 65 HLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI 143 (321)
T ss_dssp CEEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCE
T ss_pred EEEEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEE
T ss_conf 098999889988999953899808899875-3899999999999999999999998769975135544434437885189
Q ss_pred EEEECCCCCC
Q ss_conf 9950478655
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KI~DFGlar~ 269 (1620)
||+|||+++.
T Consensus 144 kl~DFG~~~~ 153 (321)
T d1tkia_ 144 KIIEFGQARQ 153 (321)
T ss_dssp EECCCTTCEE
T ss_pred EECCCCHHHC
T ss_conf 9764411100
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=332.88 Aligned_cols=199 Identities=20% Similarity=0.198 Sum_probs=156.3
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC---CCCC
Q ss_conf 3777236401565400799999943666644663089999812787770667989884089917588850248---8655
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPN 178 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpN 178 (1620)
..++|++++.||+|+||+||+|++.. ..++.||||++............+. +|+.+|+.| +|||
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~~l~~l~~~~Hpn 71 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPN 71 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETT-----TTTEEEEEEEEEEEBCTTSCBCTHH--------HHHHHHHHHHHTCCTT
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEEC-----CCCEEEEEEEEEHHHCCCHHHHHHH--------HHHHHHHHHHHCCCCC
T ss_conf 75897988899215586999999988-----8998999999802324516799999--------9999999874258988
Q ss_pred CCCEEEEEEEC-----CEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 13500699969-----9799997279989898986299999999999999999999999999399130477999537557
Q 000355 179 VAPVLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 179 Iv~l~~~~~~~-----~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~ 253 (1620)
|++++++|... ..++++||++++++...........+++..++.+++|++.||.|||+++|+||||||+|||++.
T Consensus 72 Iv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~ 151 (305)
T d1blxa_ 72 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 151 (305)
T ss_dssp BCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECC
T ss_conf 02366322146666674699999740587144444303789998999999999999999997588983579862789858
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 993379995047865578777555888888551123666675420000002555532223432343353788863
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 254 ~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL~~ 328 (1620)
++ .+||+|||+++....... .....||+.|||||++.+..|+..+|+|+.|++. |+.+++
T Consensus 152 ~~--~~kl~dfg~~~~~~~~~~------------~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il-~ell~g 211 (305)
T d1blxa_ 152 SG--QIKLADFGLARIYSFQMA------------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF-AEMFRR 211 (305)
T ss_dssp TC--CEEECSCCSCCCCCGGGG------------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHS
T ss_pred CC--CEEECCHHHHHHHCCCCC------------CCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHH-HHHHHC
T ss_conf 99--754210001011002345------------7776548511483100179888111000328999-999878
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=336.94 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=137.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCH-HHHHHHHHHCCCCCHHHHHHHC-CCCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770-6679898840899175888502-48865513
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPG-CLRHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~-~L~HpNIv 180 (1620)
+++|++++.||+|+||+||+|++. .+++.||||.+.+..... .....+. +|..++. .++|||||
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~------~t~~~vAvK~i~k~~~~~~~~~~~~~--------~e~~~l~~~~~hp~Iv 66 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFK------KTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLT 66 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHHHTTCTTBC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHHCCCCCEE
T ss_conf 997188658940878289999999------99989999998055533848999999--------9999999847999687
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 50069996997999972799-89898986299999999999999999999999999399130477999537557993379
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~i 259 (1620)
++++++.+++.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~yivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~--~~ 142 (320)
T d1xjda_ 67 HMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HI 142 (320)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CE
T ss_pred EEEEEECCCCCEEEEEEECCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCC--CE
T ss_conf 89889704983167775037980899864--047899999999999999999999868934034765404444899--63
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 99504786557877755588888855112366667542000000
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 260 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
||+|||+|+........ .....||+.|||||++
T Consensus 143 kl~DFG~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~ 175 (320)
T d1xjda_ 143 KIADFGMCKENMLGDAK-----------TNTFCGTPDYIAPEIL 175 (320)
T ss_dssp EECCCTTCBCCCCTTCC-----------BCCCCSCGGGCCHHHH
T ss_pred ECCCCCHHHHCCCCCCC-----------CCCCCCCCCCCCHHHH
T ss_conf 01555302323566533-----------4545787776899998
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=330.60 Aligned_cols=175 Identities=19% Similarity=0.225 Sum_probs=140.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCH---HHHHHHHHHCCCCCHHHHHHHCCCC-CCC
Q ss_conf 777236401565400799999943666644663089999812787770---6679898840899175888502488-655
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLR-HPN 178 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~~~~~~~~~Ei~iL~~L~-HpN 178 (1620)
.++|++.+.||+|+||+||+|++. .+++.||||++....... +..+.... ..++|+.+|+.++ |||
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~~hpn 71 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHK------PTCKEYAVKIIDVTGGGSFSAEEVQELRE----ATLKEVDILRKVSGHPN 71 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEEETTCSTTCCHHHHHHHHH----HHHHHHHHHHHHTTCTT
T ss_pred CCCCEECEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCCCCHHHHHHHHHHH----HHHHHHHHHHHHCCCCC
T ss_conf 663888528841768499999999------99989999999624464114788899999----99999999998507997
Q ss_pred CCCEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCE
Q ss_conf 1350069996997999972799-898989862999999999999999999999999993991304779995375579933
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~ 257 (1620)
|++++++|.+++.+|+|||||+ |+|.++++ ..+.+++..++.|+.||+.||.|||+++|+||||||+|||++.++
T Consensus 72 Iv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-- 147 (277)
T d1phka_ 72 IIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-- 147 (277)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--
T ss_pred EEEEEEECCCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--
T ss_conf 4799762146760599997689866899998--659999999999999999999999875994323462548986899--
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 7999504786557877755588888855112366667542000000
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 258 ~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
.+||+|||+++....... .....||+.|+|||++
T Consensus 148 ~~kl~DFG~a~~~~~~~~------------~~~~~gt~~y~~PE~~ 181 (277)
T d1phka_ 148 NIKLTDFGFSCQLDPGEK------------LREVCGTPSYLAPEII 181 (277)
T ss_dssp CEEECCCTTCEECCTTCC------------BCCCCSCGGGCCHHHH
T ss_pred CEEECCCHHEEECCCCCC------------EEEEECCCCCCCHHHH
T ss_conf 838712403167268872------------1345246788898886
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=329.49 Aligned_cols=190 Identities=18% Similarity=0.191 Sum_probs=153.3
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
+++|+++++||+|+||+||+|++ .+++.||||++...+........+. +|+.+|+.++|||||++
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~~ 65 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQN-------NYGETFALKKIRLEKEDEGIPSTTI--------REISILKELKHSNIVKL 65 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-------TTSCEEEEEEECCSSGGGCCCHHHH--------HHHHGGGGCCCTTBCCE
T ss_pred CCCCEECCEEECCCCCEEEEEEE-------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 99963431872277818999996-------8999999999812326858999999--------99999986799868766
Q ss_pred EEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEE
Q ss_conf 06999699799997279989898986299999999999999999999999999399130477999537557993379995
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI~ 262 (1620)
+++|...+..++++|++.+++...+.. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~--~~kl~ 142 (286)
T d1ob3a_ 66 YDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIA 142 (286)
T ss_dssp EEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred EEECCCCCCEEEEEEEEHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCC--CEEEC
T ss_conf 012046773158997400456789986-047751445689999999999986057488267877505686899--78732
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 0478655787775558888885511236666754200000025-5553222343234335
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~~d~W~~g~i~ 321 (1620)
|||.|........ ......+++.|+|||++.+ ..++..+|+|+.|++.
T Consensus 143 DfG~a~~~~~~~~-----------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l 191 (286)
T d1ob3a_ 143 DFGLARAFGIPVR-----------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF 191 (286)
T ss_dssp CTTHHHHHCC--------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred CCCCCEECCCCCC-----------CCCEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHH
T ss_conf 3664301146765-----------410102431101378871788888410021117589
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=328.89 Aligned_cols=151 Identities=23% Similarity=0.319 Sum_probs=129.4
Q ss_pred CCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 33377723640156540079999994366664466308999981278777066798988408991758885024886551
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 179 (1620)
.++.++|++++.||+|+||+||+|+++ .+++.||||++.... .....+.++ +|+.+|+.++||||
T Consensus 4 ~~i~~rY~~~~~LG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~-~~~~~~~~~--------~Ei~il~~l~hp~i 68 (345)
T d1pmea_ 4 FDVGPRYTNLSYIGEGAYGMVCSAYDN------VNKVRVAIKKISPFE-HQTYCQRTL--------REIKILLRFRHENI 68 (345)
T ss_dssp CCCCTTEEEEEECC---CCCEEEEEET------TTCSEEEEEEECCTT-CHHHHHHHH--------HHHHHHHHCCCTTB
T ss_pred CCCCCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHC-CHHHHHHHH--------HHHHHHHHCCCCCC
T ss_conf 373898599789940648099999999------999499999980310-958999999--------99999997689898
Q ss_pred CCEEEEEEECC-----EEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 35006999699-----7999972799898989862999999999999999999999999993991304779995375579
Q 000355 180 APVLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 180 v~l~~~~~~~~-----~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~ 254 (1620)
+++++++.... .+|+++++++|+|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.+
T Consensus 69 v~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~ 145 (345)
T d1pmea_ 69 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 145 (345)
T ss_dssp CCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred CCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
T ss_conf 85888995056455414999996259865664405---899999999999999999999997898677787643788799
Q ss_pred CCEEEEEEECCCCCCC
Q ss_conf 9337999504786557
Q 000355 255 CWSWLYICDKPLVGFN 270 (1620)
Q Consensus 255 ~~~~iKI~DFGlar~~ 270 (1620)
+ .+||+|||+|+..
T Consensus 146 ~--~~kl~DfG~a~~~ 159 (345)
T d1pmea_ 146 C--DLKICDFGLARVA 159 (345)
T ss_dssp C--CEEECCCTTCEEC
T ss_pred C--CEEECCCCCEEEC
T ss_conf 9--7787545705650
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=325.16 Aligned_cols=200 Identities=20% Similarity=0.161 Sum_probs=158.4
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37772364015654007999999436666446630899998127877706679898840899175888502488655135
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
..++|+++++||+|+||+||+|++. .+++.||||++...+........+. +|+.+|+.++||||++
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~nii~ 73 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHR------KTGQKVALKKVLMENEKEGFPITAL--------REIKILQLLKHENVVN 73 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEC----CTTSSCHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHHCCCCCCC
T ss_conf 6279889999722748299999998------9997999999842224637899999--------9999999835999660
Q ss_pred EEEEEEE--------CCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 0069996--------99799997279989898986299999999999999999999999999399130477999537557
Q 000355 182 VLGLLKT--------SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 182 l~~~~~~--------~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~ 253 (1620)
+++++.. .+.+|+|||++++.+...+.. ....+++..++.+++|++.||.|||+++|+||||||+|||++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~ 152 (318)
T d3blha1 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR 152 (318)
T ss_dssp EEEEEEC----------CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHH-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECC
T ss_conf 676540246544445763899985357874101222-0344330899999999999998852299885676722203668
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC-CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9933799950478655787775558888885511236666754200000025-555322234323433537888
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~~d~W~~g~i~nf~yL 326 (1620)
++ .+||+|||+++.......... .......||+.|+|||++.+ ..|+.++|+|+.|++. |+.+
T Consensus 153 ~~--~~kl~dfg~~~~~~~~~~~~~-------~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil-~el~ 216 (318)
T d3blha1 153 DG--VLKLADFGLARAFSLAKNSQP-------NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMW 216 (318)
T ss_dssp TS--CEEECCCTTCEECCC-----C-------CCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH-HHHH
T ss_pred CC--CEEEEECCEEEECCCCCCCCC-------CCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEE-EEHH
T ss_conf 99--687631350022355444321-------1356602497874289970799989178700678646-6174
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=333.55 Aligned_cols=172 Identities=17% Similarity=0.142 Sum_probs=134.0
Q ss_pred CCCCCCCEEEEE-CEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHC-CCCC
Q ss_conf 233377723640-15654007999999436666446630899998127877706679898840899175888502-4886
Q 000355 99 CSRIMTALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRH 176 (1620)
Q Consensus 99 ~~~~~~~y~~~~-~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~-~L~H 176 (1620)
...+.++|.+.. .||+|+||+||+|++. .+++.||||++.... .+. +|+.++. .++|
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~-------~~~--------~E~~~~~~~~~h 64 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNK------RTQEKFALKMLQDCP-------KAR--------REVELHWRASQC 64 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEECSH-------HHH--------HHHHHHHHHTTS
T ss_pred CCCCCCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCH-------HHH--------HHHHHHHHHCCC
T ss_conf 99701487981079654548699999988------999899999989747-------799--------999999986699
Q ss_pred CCCCCEEEEEEE----CCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf 551350069996----9979999727998-98989862999999999999999999999999993991304779995375
Q 000355 177 PNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 177 pNIv~l~~~~~~----~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi 251 (1620)
||||+++++|++ ...+|+|||||+| +|.+++.......+++..++.|++|++.||.|||+++|+||||||+|||+
T Consensus 65 pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll 144 (335)
T d2ozaa1 65 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 144 (335)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99782989995034689789999977899849999986278775799999999999999999997698644410022011
Q ss_pred CCCCC-EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 57993-37999504786557877755588888855112366667542000000
Q 000355 252 TDSCW-SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 252 ~~~~~-~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
+.+.. ..+||+|||+|+....... .....||+.|||||++
T Consensus 145 ~~~~~~~~~Kl~DFG~a~~~~~~~~------------~~~~~gt~~y~aPE~~ 185 (335)
T d2ozaa1 145 TSKRPNAILKLTDFGFAKETTSHNS------------LTTPCYTPYYVAPEVL 185 (335)
T ss_dssp SCSSTTCCEEECCCTTCEECCCCCC------------CCCCSCCCSSCCCCCC
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCC------------CCCCCCCCCCCCCHHH
T ss_conf 3555566311354551233368886------------4322677563792777
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=326.39 Aligned_cols=189 Identities=22% Similarity=0.277 Sum_probs=144.3
Q ss_pred CCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEE
Q ss_conf 77236401565400799999943666644663089999812787770667989884089917588850248865513500
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l~ 183 (1620)
.+|..++.||+|+||+||+|++. .+++.||||++...+.... +|+.+|+.++||||++++
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~--------------~Ei~il~~l~h~niv~~~ 79 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLC------DSGELVAIKKVLQDKRFKN--------------RELQIMRKLDHCNIVRLR 79 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCSSSCC--------------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCCHHHH--------------HHHHHHHHCCCCCCCCEE
T ss_conf 77675169821768399999999------9997999999881606899--------------999999866898987387
Q ss_pred EEEEEC------CEEEEEEECCCCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 699969------97999972799898989862--9999999999999999999999999939913047799953755799
Q 000355 184 GLLKTS------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 184 ~~~~~~------~~~~LV~E~~~gsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~ 255 (1620)
++|... .++|+|||||++++.+.+.. .....+++..++.+++|++.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~ 159 (350)
T d1q5ka_ 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT 159 (350)
T ss_dssp EEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT
T ss_pred EEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
T ss_conf 89974476577318999984168860788886310368999999999999999999999866876457886037873589
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 3379995047865578777555888888551123666675420000002-5555322234323433537888
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 256 ~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~~d~W~~g~i~nf~yL 326 (1620)
. .+||+|||+++....... .....|++.|+|||++. ...|+..+|+|+.|++. |+.+
T Consensus 160 ~-~~kl~DFG~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il-~el~ 217 (350)
T d1q5ka_ 160 A-VLKLCDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL-AELL 217 (350)
T ss_dssp C-CEEECCCTTCEECCTTSC------------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHH-HHHH
T ss_pred C-CEEEECCCCHHHCCCCCC------------CCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEE-EEHH
T ss_conf 7-116733660544047765------------32002555556827764046888210002465277-8550
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-44 Score=317.43 Aligned_cols=190 Identities=17% Similarity=0.185 Sum_probs=156.9
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
+++|++++.||+|+||+||+|++. .+++.||||+++..........++. +|+.+|+.++||||+++
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~niv~~ 66 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSAL--------REICLLKELKHKNIVRL 66 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEESSCSSTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999786269712868199999999------9996999999803217868999999--------99999985675788821
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+.+.+++|+|++.| ++..++. ..+.+++..++.++.|++.||+|||+++|+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~iv~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~--~~kl 142 (292)
T d1unla_ 67 HDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKL 142 (292)
T ss_dssp EEEEECSSEEEEEEECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC--CEEE
T ss_conf 354444431158863023322211212--356540367899999999998774339986001467612113378--2665
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 5047865578777555888888551123666675420000002555-53222343234335
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRGELS 321 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~~d~W~~g~i~ 321 (1620)
+|||.|+........ ....++++.|+|||++.... ++.++|+|+.|++.
T Consensus 143 ~DFG~a~~~~~~~~~-----------~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il 192 (292)
T d1unla_ 143 ANFGLARAFGIPVRC-----------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp CCCTTCEECCSCCSC-----------CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECCHHHCCCCCCCC-----------CEEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHH
T ss_conf 204601104688751-----------00103443101466750698888044402654188
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=329.55 Aligned_cols=174 Identities=12% Similarity=0.067 Sum_probs=138.6
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC--CCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706679898840899175888502488--65513
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR--HPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIv 180 (1620)
.++|++++.||+|+||+||+|++. .+++.||||.+.............. ....+|+.+|+.++ |||||
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~----~~~~~E~~il~~l~~~h~nIv 72 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRV------SDNLPVAIKHVEKDRISDWGELPNG----TRVPMEVVLLKKVSSGFSGVI 72 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEEGGGCCCEEECTTC----CEEEHHHHHHHHHCSSSCSBC
T ss_pred CCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHH----HHHHHHHHHHHHHCCCCCCCC
T ss_conf 883799679840878399999999------9997999999856884433455679----999999999997435898812
Q ss_pred CEEEEEEECCEEEEEEECCCC--CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC-CCE
Q ss_conf 500699969979999727998--98989862999999999999999999999999993991304779995375579-933
Q 000355 181 PVLGLLKTSGLITSVIPKTPY--TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWS 257 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~g--sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~-~~~ 257 (1620)
+++++|.+.+.+|+|||++.+ ++.+++. ....+++..++.++.|++.||.|||+++|+||||||+|||++.+ +
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~-- 148 (273)
T d1xwsa_ 73 RLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG-- 148 (273)
T ss_dssp CEEEEEECSSEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT--
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC--
T ss_conf 799998309968999983368622899986--1589999999999999999999998779755667611147744788--
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 7999504786557877755588888855112366667542000000
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 258 ~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
.+||+|||+|+...... .....||+.|||||++
T Consensus 149 ~vkl~DFG~a~~~~~~~-------------~~~~~GT~~y~aPE~~ 181 (273)
T d1xwsa_ 149 ELKLIDFGSGALLKDTV-------------YTDFDGTRVYSPPEWI 181 (273)
T ss_dssp EEEECCCTTCEECCSSC-------------BCCCCSCGGGSCHHHH
T ss_pred EEEECCCCCCEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 48977546535324445-------------5665658774799998
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=323.96 Aligned_cols=189 Identities=21% Similarity=0.279 Sum_probs=143.5
Q ss_pred CCCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
Q ss_conf 23337772364015654007999999436666446630899998127877706679898840899175888502488655
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN 178 (1620)
.+.+.++|++++.||+|+||+||+|++. .+++.||||++............+. +|+.+|+.++|||
T Consensus 13 ~~~~~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~h~~ 78 (348)
T d2gfsa1 13 IWEVPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHEN 78 (348)
T ss_dssp EEEEETTEEEEEECGGGTTSSEEEEEET------TTTEEEEEEECSCTTSSHHHHHHHH--------HHHHHHHHCCCTT
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCHHCCHHHHHHHH--------HHHHHHHHCCCCC
T ss_conf 5458987188889831788399999999------9997999999882002868999999--------9999998668987
Q ss_pred CCCEEEEEEECC------EEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC
Q ss_conf 135006999699------79999727998989898629999999999999999999999999939913047799953755
Q 000355 179 VAPVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 179 Iv~l~~~~~~~~------~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~ 252 (1620)
||++++++.... .+++++++.+|+|.+++. .+.+++..++.+++||+.||.|||++||+||||||+|||++
T Consensus 79 iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~ 155 (348)
T d2gfsa1 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155 (348)
T ss_dssp BCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred EEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 425999996346456686499999625886232002---24530999999999999999999738876516677633455
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCC-CCCCCCCCCCCCCC
Q ss_conf 799337999504786557877755588888855112366667542000000255-55322234323433
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGEL 320 (1620)
Q Consensus 253 ~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~~d~W~~g~i 320 (1620)
.++ .+|++|||+|...... .....|++.|+|||+..+. .++..+|+|+.|++
T Consensus 156 ~~~--~~kl~dfg~a~~~~~~--------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~ 208 (348)
T d2gfsa1 156 EDC--ELKILDFGLARHTDDE--------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208 (348)
T ss_dssp TTC--CEEECCC----CCTGG--------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHH
T ss_pred CCC--CCCCCCCCHHCCCCCC--------------CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHH
T ss_conf 432--2001321000125754--------------4443454355583553377567855124320589
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=318.87 Aligned_cols=181 Identities=17% Similarity=0.117 Sum_probs=141.0
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770667989884089917588850248-8655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIv~ 181 (1620)
.++|++++.||+|+||+||+|++.... .......||+|.+.... .......+. +|+.+|..+ +|||||+
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~HpnIv~ 105 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGIS-KTGVSIQVAVKMLKEKA-DSSEREALM--------SELKMMTQLGSHENIVN 105 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCS-SSSCEEEEEEEEECC-------CHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCCC-CCCCEEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHHCCCCCEEE
T ss_conf 899397019830788199999985788-55420499999966335-878999999--------99999997158996868
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0069996997999972799-898989862999---------------------999999999999999999999993991
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------------------ALKSEWHVRFLMYQLLSAIAYLHSLGI 239 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~---------------------~~l~~~~i~~i~~qil~aL~yLH~~~I 239 (1620)
+++++.+.+.+|+|||||+ |+|.++++.... ..+++..++.|+.|++.||.|||+++|
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I 185 (325)
T d1rjba_ 106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185 (325)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 77888629958999972799959999986257775102210000122200125778999999999999999999973990
Q ss_pred EECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 30477999537557993379995047865578777555888888551123666675420000002
Q 000355 240 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 240 iHRDLKp~NILi~~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+||||||+|||++.++ .+||+|||+|+........ .......||+.|||||++.
T Consensus 186 iHRDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~---------~~~~~~~gt~~y~aPE~l~ 239 (325)
T d1rjba_ 186 VHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNY---------VVRGNARLPVKWMAPESLF 239 (325)
T ss_dssp EETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTS---------EEETTEEECGGGCCHHHHH
T ss_pred EECCCCHHCCCCCCCC--EEEEEECCCCCCCCCCCCE---------EEECCCCCCCCCCCHHHHC
T ss_conf 5052703214434598--2898514222204577861---------5623435787657838872
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=318.41 Aligned_cols=194 Identities=20% Similarity=0.238 Sum_probs=161.7
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33777236401565400799999943666644663089999812787770667989884089917588850248865513
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+.++|+++++||+|+||+||+|++. .+|..||||++............+. +|+.+|+.++|||||
T Consensus 14 ~i~~~Y~i~~~LG~G~fg~V~~~~d~------~t~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv 79 (355)
T d2b1pa1 14 TVLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNII 79 (355)
T ss_dssp EEETTEEEEEECSCC--CEEEEEEET------TTTEEEEEEEEESTTSSHHHHHHHH--------HHHHHHHHCCCTTBC
T ss_pred EECCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEE
T ss_conf 53377599889621758599999999------9998999999882336979999999--------999999864898764
Q ss_pred CEEEEEEEC------CEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 500699969------97999972799898989862999999999999999999999999993991304779995375579
Q 000355 181 PVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~~------~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~ 254 (1620)
+++++|... ..+|+||||+.|++.+.+. ..+++..++.+++|++.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~ 155 (355)
T d2b1pa1 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155 (355)
T ss_dssp CCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred EEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 8998970256434576269998414467787650----389999999999999999988652211245677632113654
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9337999504786557877755588888855112366667542000000255553222343234335378886
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 255 ~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL~ 327 (1620)
+ .+|++|||+++...... ......+|+.|+|||++.+..|+..+|+|+.|++. |+.+.
T Consensus 156 ~--~~kl~df~~~~~~~~~~------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l-~ell~ 213 (355)
T d2b1pa1 156 C--TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMVR 213 (355)
T ss_dssp C--CEEECCCCC---------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHH-HHHHH
T ss_pred C--CEEEECHHHHHCCCCCC------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHH-HHHHH
T ss_conf 4--31320102321146665------------53322146555581331477778774333566257-89865
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-44 Score=314.60 Aligned_cols=171 Identities=18% Similarity=0.100 Sum_probs=139.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|+. +..||||+++......+..+.|. +|+.+|+.++|||||++
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~---------~~~vAvK~~~~~~~~~~~~~~~~--------~E~~~l~~l~HpnIv~~ 69 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKW---------HGDVAVKMLNVTAPTPQQLQAFK--------NEVGVLRKTRHVNILLF 69 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEES---------SSEEEEEECCCSSCCTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEE---------CCEEEEEEEECCCCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 45189988983078858999999---------99899999973469989999999--------99999984799878645
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++. .+.+++|||||+ |+|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 70 ~~~~~-~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~--~~Kl 145 (276)
T d1uwha_ 70 MGYST-APQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKI 145 (276)
T ss_dssp EEEEC-SSSCEEEEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS--SEEE
T ss_pred EEEEE-CCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 67971-5589999965899888999852-357899999999999999998887509995161478997981899--7887
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC
Q ss_conf 504786557877755588888855112366667542000000
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 303 (1620)
+|||+|+......... ......||+.|||||++
T Consensus 146 ~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l 178 (276)
T d1uwha_ 146 GDFGLATVKSRWSGSH---------QFEQLSGSILWMAPEVI 178 (276)
T ss_dssp CCCCCSCC---------------------CCCCGGGCCHHHH
T ss_pred CCCCCEEECCCCCCCC---------CCCCCCCCCCCCCHHHH
T ss_conf 5002213335567763---------12566557431799999
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=318.22 Aligned_cols=152 Identities=16% Similarity=0.159 Sum_probs=130.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCH--HHHHHHHHHCCCCCHHHHHHHCCCCC-CCC
Q ss_conf 777236401565400799999943666644663089999812787770--66798988408991758885024886-551
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRH-PNV 179 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNI 179 (1620)
.++|++++.||+|+||+||+|.+...+ .+|+.||+|.+.+..... .....+. +|+++|+.++| |||
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~--------~E~~il~~l~h~pnI 91 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGH---DTGKLYAMKVLKKATIVQKAKTTEHTR--------TERQVLEHIRQSPFL 91 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSST---TTTCEEEEEEESEEEEEEEESSGGGCC--------CHHHHHHHHHTCTTB
T ss_pred HHCEEEEEEEECCCCEEEEEEEECCCC---CCCCEEEEEEEEHHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEE
T ss_conf 102599989832878399999987658---879489999983677210168999999--------999999864679839
Q ss_pred CCEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 350069996997999972799-8989898629999999999999999999999999939913047799953755799337
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~ 258 (1620)
+++++++.+...+++||||+. |+|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .
T Consensus 92 v~~~~~~~~~~~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~ 167 (322)
T d1vzoa_ 92 VTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--H 167 (322)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--C
T ss_pred EEEEEEECCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCC--C
T ss_conf 996200024873001231234117999987--304543788888899999999885149989654773201246999--8
Q ss_pred EEEEECCCCCC
Q ss_conf 99950478655
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 iKI~DFGlar~ 269 (1620)
+||+|||+|+.
T Consensus 168 vkL~DFG~a~~ 178 (322)
T d1vzoa_ 168 VVLTDFGLSKE 178 (322)
T ss_dssp EEESCSSEEEE
T ss_pred EEEEECCCHHH
T ss_conf 88741320222
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.3e-43 Score=309.09 Aligned_cols=186 Identities=20% Similarity=0.278 Sum_probs=150.6
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC-CCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706679898840899175888502488-655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIv~ 181 (1620)
.++|++++.||+|+||+||+|++. .+++.||||+++... ..++. +|+.+|+.++ ||||++
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~-----~~~~~--------~Ei~il~~l~~hpnIv~ 94 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINI------TNNEKVVVKILKPVK-----KKKIK--------REIKILENLRGGPNIIT 94 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSSC-----HHHHH--------HHHHHHHHHTTSTTBCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHH-----HHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 867189789831748199999988------999799999988899-----99999--------99999985157998767
Q ss_pred EEEEEEEC--CEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 00699969--979999727998-989898629999999999999999999999999939913047799953755799337
Q 000355 182 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~--~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~ 258 (1620)
++++|... ..+++||||+++ +|..+. +.+++..++.+++||+.||.|||++||+||||||+|||++.++. .
T Consensus 95 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~-~ 168 (328)
T d3bqca1 95 LADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-K 168 (328)
T ss_dssp EEEEEECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-E
T ss_pred EEEEEEECCCCCEEEEEEECCCCCHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC-E
T ss_conf 99999816877126888631798589974-----68999999999999999998876433443456441237748998-3
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCC-CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99950478655787775558888885511236666754200000025-555322234323433537888
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 259 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~~d~W~~g~i~nf~yL 326 (1620)
+||+|||+|+....... .....+|+.|+|||++.+ ..|+..+|+|+.|++. |+.+
T Consensus 169 vkl~DFG~a~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l-~e~~ 224 (328)
T d3bqca1 169 LRLIDWGLAEFYHPGQE------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML-ASMI 224 (328)
T ss_dssp EEECCGGGCEECCTTCC------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH-HHHH
T ss_pred EEECCCCCCEECCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHC
T ss_conf 66415654266468874------------44322486424761026888888452323354555-8760
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-40 Score=286.78 Aligned_cols=290 Identities=19% Similarity=0.309 Sum_probs=217.5
Q ss_pred EEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE
Q ss_conf 87479730378503567689999914999899951588987579999589984999971477655699993089908992
Q 000355 1254 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1333 (1620)
Q Consensus 1254 iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~ 1333 (1620)
.|.......++|+||.++|++++|+|++++|+|||. |++|++||+.+++++.++.+|.+.|.+++|++++..+++.
T Consensus 2 ~w~p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~----Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~ 77 (317)
T d1vyhc1 2 EWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASE----DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 77 (317)
T ss_dssp CCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEES----SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
T ss_conf 368989844898588887689999389899999938----9929999899997999995788867777630111101111
Q ss_pred --CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf --792999969999257997036876434468998842122465321124677888489743498217987724998999
Q 000355 1334 --DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1411 (1620)
Q Consensus 1334 --DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lv 1411 (1620)
++++..|+....+....+..+. ..+.++.++++++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~ 117 (317)
T d1vyhc1 78 SADMTIKLWDFQGFECIRTMHGHD----------------------------------------HNVSSVSIMPNGDHIV 117 (317)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCS----------------------------------------SCEEEEEECSSSSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC----------------------------------------CCCEEEECCCCCCEEE
T ss_conf 111110111001111111100000----------------------------------------0000000169985577
Q ss_pred EEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE
Q ss_conf 99779909999878992468860899654568751057650897633576567998899990599099997899948999
Q 000355 1412 VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1491 (1620)
Q Consensus 1412 sgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~ 1491 (1620)
+++.|+.+++||+++++.+..+.++.. .+.++++. ++++++++|+.|+.|++||.++++.+..
T Consensus 118 ~~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----------~~~~~l~~~~~d~~v~~~~~~~~~~~~~ 180 (317)
T d1vyhc1 118 SASRDKTIKMWEVQTGYCVKTFTGHRE------WVRMVRPN-----------QDGTLIASCSNDQTVRVWVVATKECKAE 180 (317)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSS------CEEEEEEC-----------TTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEECCCCC------CCEEEECC-----------CCCCEEEEEECCCEEEEEEECCCEEEEE
T ss_conf 652675235751144303468716777------63000016-----------6799999992798299975125403478
Q ss_pred EECCCCCEEEEE-ECC--------------------CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEEC
Q ss_conf 971377578998-179--------------------99999995899499997899999988484069998799--9641
Q 000355 1492 WRAHDGYVTKLA-APE--------------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW 1548 (1620)
Q Consensus 1492 l~~H~~~V~sVa-spd--------------------g~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--fSpd 1548 (1620)
+.+|...+.++. +++ +..+++++.|+.|++||++++ ..+.++.+|...|.+ ++|+
T Consensus 181 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 258 (317)
T d1vyhc1 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSG 258 (317)
T ss_dssp ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSS
T ss_pred EECCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCC--CEEEEEECCCCCEEEEEECCC
T ss_conf 824778733799863256411103456303430258861475169978999888999--688999688998799998799
Q ss_pred CCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 99999994993-6998266788989950000110012117987546489999924998999991899499919
Q 000355 1549 GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1549 g~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
+++|++|+.|+ |++||+. ++..... + . +|.+.|++++|+|++++|++|+.||+|+|||
T Consensus 259 ~~~l~s~~~dg~i~iwd~~-----~~~~~~~----~---~--~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 259 GKFILSCADDKTLRVWDYK-----NKRCMKT----L---N--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SSCEEEEETTTEEEEECCT-----TSCCCEE----E---E--CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEECCCEEEEEECC-----CCCEEEE----E---C--CCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 9999999798949999999-----9919999----9---2--8999889999949999999992899499829
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=277.13 Aligned_cols=279 Identities=14% Similarity=0.220 Sum_probs=222.0
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCE-----EEEEEECCCCCEEEEEEEECCCEEEE--
Q ss_conf 30378503567689999914999899951588987579999589984-----99997147765569999308990899--
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSGYYGHEEVVNDICVLSSSGRIAS-- 1332 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~-----~i~~l~gH~~~V~sIafs~~~~~LaS-- 1332 (1620)
+.+.++ +|.+.|.+++|++++++|+||+ |++|++||+.++. ......+|.+.|.+++|+|++..+++
T Consensus 43 ~~~~~~-~H~~~V~~v~fs~~g~~latg~-----dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~ 116 (337)
T d1gxra_ 43 RQINTL-NHGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp EEEEEE-CCSSCCCEEEECSSSSEEEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred EEEEEC-CCCCCEEEEEECCCCCEEEEEE-----CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEE
T ss_conf 499987-9999289999989999999997-----9988997736776331168764048899689999867998898861
Q ss_pred ECCCEEEEECCCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEE
Q ss_conf 27929999699992--5799703687643446899884212246532112467788848974349821798772499899
Q 000355 1333 CDGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1410 (1620)
Q Consensus 1333 ~DgtI~IWD~~tg~--~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~l 1410 (1620)
.|++|++||+.... ....+..+. ..+.++.+++++..+
T Consensus 117 ~dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------------~~v~~~~~~~~~~~l 156 (337)
T d1gxra_ 117 EASTLSIWDLAAPTPRIKAELTSSA----------------------------------------PACYALAISPDSKVC 156 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEECSS----------------------------------------SCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC----------------------------------------CCCCCCCCCCCCCCC
T ss_conf 2332111111111111111111111----------------------------------------111111111111111
Q ss_pred EEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf 99977990999987899246886089965456875105765089763357656799889999059909999789994899
Q 000355 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490 (1620)
Q Consensus 1411 vsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~ 1490 (1620)
++++.|+.+++||+.++++......+. ..+.+++++ +++..+++|+.|+.+++||+++++.+.
T Consensus 157 ~s~~~d~~i~~~~~~~~~~~~~~~~~~------~~v~~l~~s-----------~~~~~~~~~~~d~~v~i~d~~~~~~~~ 219 (337)
T d1gxra_ 157 FSCCSDGNIAVWDLHNQTLVRQFQGHT------DGASCIDIS-----------NDGTKLWTGGLDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCS------SCEEEEEEC-----------TTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 111111111111111111111111111------111101234-----------443211223566553211111100000
Q ss_pred EEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECC
Q ss_conf 9971377578998-17999999995899499997899999988484069998799--964199999994993-6998266
Q 000355 1491 SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1491 ~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
.+. |...|++++ +|+++++++|+.|+.+++||++.+. .....+|...|.+ |+|+++.+++++.|+ |++|++.
T Consensus 220 ~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~ 295 (337)
T d1gxra_ 220 QHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCC-CCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCC---CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 246-66615799971530300000025642111111111---00001245654169998999999999489969999899
Q ss_pred CCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 788989950000110012117987546489999924998999991899499919
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
.+.. +... +|.+.|++++|+|++++|++|+.||.|+||+
T Consensus 296 -----~~~~------~~~~----~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 296 -----YGAS------IFQS----KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp -----TCCE------EEEE----ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred -----CCCE------EEEC----CCCCCEEEEEEECCCCEEEEEECCCEEEEEE
T ss_conf -----9979------9992----6999879999927999999990899699997
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-42 Score=300.72 Aligned_cols=146 Identities=18% Similarity=0.165 Sum_probs=127.2
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++ .++..||||++...... ...|. +|+.+|+.++|||||++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~-------~~~~~vAiK~l~~~~~~---~~~~~--------~E~~~l~~l~h~nIv~~ 77 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 77 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-------TTTEEEEEEECCTTSSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEE-------CCCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 79979846993079809999999-------99999999998804488---89999--------99999986666788689
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++. .+.+++||||++ |+|..++.......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 78 ~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~--~~kl 154 (285)
T d1fmka3 78 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 154 (285)
T ss_dssp EEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred EEEEE-CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCC--CEEE
T ss_conf 99982-39759999944799435420000355305999999999999999987541143353123079998999--2998
Q ss_pred EECCCCCC
Q ss_conf 50478655
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGlar~ 269 (1620)
+|||+|+.
T Consensus 155 ~DfGla~~ 162 (285)
T d1fmka3 155 ADFGLARL 162 (285)
T ss_dssp CCCCTTC-
T ss_pred CCCCHHHH
T ss_conf 44255542
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-38 Score=275.37 Aligned_cols=302 Identities=18% Similarity=0.260 Sum_probs=223.6
Q ss_pred EEEECCCCCEEEEECC-CC----EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEE-----
Q ss_conf 8997089977787479-73----0378503567689999914999899951588987579999589984999971-----
Q 000355 1243 LGRVGGLKDESPWKIK-AS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY----- 1312 (1620)
Q Consensus 1243 las~s~D~~i~iWd~~-~~----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~----- 1312 (1620)
..++..++...+|+.. .. .+....+|+++|+|++|+|||++|++|+ |++|++||+.+++++..+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-----d~~i~iW~~~~~~~~~~~~~~~~~ 105 (388)
T d1erja_ 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-----NKTTQVYRVSDGSLVARLSDDSAA 105 (388)
T ss_dssp TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-----BSCEEEEETTTCCEEEEECC----
T ss_pred CCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEE-----CCEEEEEEECCCCEEEEECCCCCC
T ss_conf 224688970898688777620541076079999689999999999999994-----994899981364057663166544
Q ss_pred -------------CCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------------477655699993089908992--79299996999925799703687643446899884212246532
Q 000355 1313 -------------GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1377 (1620)
Q Consensus 1313 -------------gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1377 (1620)
+|...|++++|++++.+++++ ||+|++||..+++.+..+.+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~--------------------- 164 (388)
T d1erja_ 106 NKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ--------------------- 164 (388)
T ss_dssp -------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS---------------------
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC---------------------
T ss_conf 32443211101467789889999889998012134441111211111111111111111---------------------
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 11246778884897434982179877249989999977990999987899246886089965456875105765089763
Q 000355 1378 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1378 ~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~ 1457 (1620)
.+.++.+++++..+++++.++.+++||..+.........+.. ..++++.+
T Consensus 165 -------------------~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~---- 214 (388)
T d1erja_ 165 -------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-------VTTVAVSP---- 214 (388)
T ss_dssp -------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC-------EEEEEECS----
T ss_pred -------------------CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC-------CCCCCCCC----
T ss_conf -------------------111101111111111222101565410111111000012454-------42112368----
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE-------CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 357656799889999059909999789994899997-------1377578998-17999999995899499997899999
Q 000355 1458 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-------AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1458 s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~-------~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~ 1529 (1620)
.+++++++|+.||.|++||.+++..+..+. +|.+.|++++ +|++++|++|+.|+.|++||++++..
T Consensus 215 ------~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~ 288 (388)
T d1erja_ 215 ------GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 288 (388)
T ss_dssp ------TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----
T ss_pred ------CCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC
T ss_conf ------87875899738981999634557300010244333457789878999979999999997899289875157764
Q ss_pred ----------CCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEE
Q ss_conf ----------988484069998799--964199999994993-6998266788989950000110012117987546489
Q 000355 1530 ----------SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS 1596 (1620)
Q Consensus 1530 ----------~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~ 1596 (1620)
........|...|.+ |++++++|++|+.|+ |++||+. ++.... .. . +|.+.|+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~-----~~~~~~------~l-~--~H~~~V~ 354 (388)
T d1erja_ 289 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK-----SGNPLL------ML-Q--GHRNSVI 354 (388)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT-----TCCEEE------EE-E--CCSSCEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECC-----CCCEEE------EE-E--CCCCCEE
T ss_conf 32101344420011012455327899988999999999698979999999-----996999------99-6--8899789
Q ss_pred EEEE------ECCCCEEEEEECCCCEEECC
Q ss_conf 9999------24998999991899499919
Q 000355 1597 SISI------LPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1597 svaf------sPdg~lLasgs~DG~IrIwd 1620 (1620)
++++ +|++.+|++|+.||+|+||+
T Consensus 355 ~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~ 384 (388)
T d1erja_ 355 SVAVANGSSLGPEYNVFATGSGDCKARIWK 384 (388)
T ss_dssp EEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf 999846742589999999991899799976
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-42 Score=298.93 Aligned_cols=195 Identities=17% Similarity=0.161 Sum_probs=144.7
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770667989884089917588850248-8655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIv~ 181 (1620)
.++|++++.||+|+||.||+|++... +...+++.||||++... ......+.+. +|..++..+ +|+||+.
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~-~~~~~~~~vAvK~l~~~-~~~~~~~~~~--------~e~~~l~~~~~h~~iv~ 81 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGI-DKTATCRTVAVKMLKEG-ATHSEHRALM--------SELKILIHIGHHLNVVN 81 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEEST-TSSSCEEEEEEEEC-----CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCC-CCCCCCEEEEEEEECCC-CCCHHHHHHH--------HHHHHHHHHCCCCEEEE
T ss_conf 79979844984167839999998677-75557839999998600-1717899999--------99999886149984997
Q ss_pred EEEEEEEC-CEEEEEEECCC-CCHHHHHHHCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 00699969-97999972799-89898986299--------------9999999999999999999999993991304779
Q 000355 182 VLGLLKTS-GLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 182 l~~~~~~~-~~~~LV~E~~~-gsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLK 245 (1620)
+++++... ..+++|||||+ |+|.++++... ...+++..++.++.|++.||.|||+++|+|||||
T Consensus 82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK 161 (299)
T d1ywna1 82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 161 (299)
T ss_dssp EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred EEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 41154047975799998458992999998536666653222023321468999999999999999998873797178677
Q ss_pred CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 9953755799337999504786557877755588888855112366667542000000255553222343234
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 246 p~NILi~~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g 318 (1620)
|+|||++.++ .+||+|||+|+.......... .....||+.|||||++.+..|+..+|+|+.|
T Consensus 162 p~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~---------~~~~~gt~~y~APE~l~~~~~~~~sDiwS~G 223 (299)
T d1ywna1 162 ARNILLSEKN--VVKICDFGLARDIYKDPDYVR---------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG 223 (299)
T ss_dssp GGGEEECGGG--CEEECC------CCSCTTSCC---------TTSCCCGGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCEEECCCC--CEEECCCCCHHHCCCCCCCCC---------CCCEEECCCCCCHHHHHCCCCCCCCCEEEHH
T ss_conf 3106577998--289845752001135665222---------4751667210203686468899663221367
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.7e-38 Score=274.28 Aligned_cols=289 Identities=15% Similarity=0.267 Sum_probs=253.1
Q ss_pred CCCCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 234569992563--3899988899838997089977787479-7303785035676899999149998999515889875
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1295 (1620)
Q Consensus 1219 ~~~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1295 (1620)
.++.||++.|++ |+|++.+ |++||.|+++++||+. +.++.++++|.+.|.+++|++++..+++++. ++
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~-----l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~----~~ 81 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA----DM 81 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSE-----EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET----TS
T ss_pred EEECCCCCCEEEEEECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC----CC
T ss_conf 898588887689999389899-----999938992999989999799999578886777763011110111111----11
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999589984999971477655699993089908992--7929999699992579970368764344689988421224
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1296 tVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
++..|+....+....+.+|...+.++.|++++..++++ |+.+++||+.+++.+..+..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~------------------ 143 (317)
T d1vyhc1 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR------------------ 143 (317)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCC------------------
T ss_conf 10111001111111100000000000016998557765267523575114430346871677------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEC
Q ss_conf 65321124677888489743498217987724998999997799099998789924688608996545687510576508
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~ 1453 (1620)
..+.++++++++..+++++.|+.|++|+..+++....+..+.. .+.++++.+
T Consensus 144 ----------------------~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~------~i~~~~~~~ 195 (317)
T d1vyhc1 144 ----------------------EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH------VVECISWAP 195 (317)
T ss_dssp ----------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------CEEEEEECC
T ss_pred ----------------------CCCEEEECCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCC------CCEEEEEEE
T ss_conf ----------------------7630000166799999992798299975125403478824778------733799863
Q ss_pred CCCCCC---------CCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEE
Q ss_conf 976335---------76567998899990599099997899948999971377578998-17999999995899499997
Q 000355 1454 SEKMQA---------GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1454 ~~~~s~---------~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWD 1523 (1620)
...... ......+.++++|+.|+.|++||.++++++.++.+|...|++++ +|++++|++|+.||.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 275 (317)
T d1vyhc1 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275 (317)
T ss_dssp SCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred CCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 25641110345630343025886147516997899988899968899968899879999879999999997989499999
Q ss_pred CCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEE
Q ss_conf 899999988484069998799--964199999994993-69982
Q 000355 1524 LRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1524 l~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwd 1564 (1620)
+.++ +.+.++.+|...|++ |+++++.|++|+.|+ |++|+
T Consensus 276 ~~~~--~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 276 YKNK--RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CTTS--CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCCC--CEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 9999--19999928999889999949999999992899499829
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-38 Score=273.49 Aligned_cols=283 Identities=16% Similarity=0.246 Sum_probs=235.2
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEE------------------CCCCCEEEEEECC
Q ss_conf 4569992563--3899988899838997089977787479-73037850------------------3567689999914
Q 000355 1221 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR------------------AHHGALRSVAVGQ 1279 (1620)
Q Consensus 1221 ~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~------------------gH~~~V~svafsp 1279 (1620)
..+|++.|++ |||||++ |++|+ |+++++|++. +..+.++. +|...|++++|+|
T Consensus 58 ~~~H~~~V~~l~fs~dg~~-----lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 131 (388)
T d1erja_ 58 SLDHTSVVCCVKFSNDGEY-----LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131 (388)
T ss_dssp EEECSSCCCEEEECTTSSE-----EEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 0799996899999999999-----99994-99489998136405766316654432443211101467789889999889
Q ss_pred CCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE--EEECCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 999899951588987579999589984999971477655699993089908--992792999969999257997036876
Q 000355 1280 DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD 1357 (1620)
Q Consensus 1280 dg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L--aS~DgtI~IWD~~tg~~i~~l~~~~~~ 1357 (1620)
+++++++|+. |++|++|+..+++.+..+.+|...|.+++|++++..+ ++.|+.+++||..+.........+.
T Consensus 132 ~~~~l~s~~~----dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-- 205 (388)
T d1erja_ 132 DGKFLATGAE----DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-- 205 (388)
T ss_dssp TSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS--
T ss_pred CCCCCEECCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC--
T ss_conf 9980121344----4111121111111111111111111110111111111122210156541011111100001245--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
Q ss_conf 43446899884212246532112467788848974349821798772499899999779909999878992468860899
Q 000355 1358 SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1437 (1620)
Q Consensus 1358 ~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~ 1437 (1620)
.. ..+..+..+++.+++|+.|+.|++||..++..+..+....
T Consensus 206 -----------------------------~~---------~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 247 (388)
T d1erja_ 206 -----------------------------GV---------TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN 247 (388)
T ss_dssp -----------------------------CE---------EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---
T ss_pred -----------------------------CC---------CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCCC
T ss_conf -----------------------------44---------2112368878758997389819996345573000102443
Q ss_pred C-CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC------------EEEEEECCCCCEEEEE-
Q ss_conf 6-5456875105765089763357656799889999059909999789994------------8999971377578998-
Q 000355 1438 T-ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN------------VIASWRAHDGYVTKLA- 1503 (1620)
Q Consensus 1438 ~-~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~------------~i~~l~~H~~~V~sVa- 1503 (1620)
. ..+|...|.+++++ ++++++++|+.||.|++||++++. .......|...|++++
T Consensus 248 ~~~~~h~~~v~~l~~s-----------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 316 (388)
T d1erja_ 248 ESGTGHKDSVYSVVFT-----------RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316 (388)
T ss_dssp ---CCCSSCEEEEEEC-----------TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE
T ss_pred CCCCCCCCCEEEEEEC-----------CCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE
T ss_conf 3345778987899997-----------99999999978992898751577643210134442001101245532789998
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--------EEECCCEEEEEECCC-EEEEECC
Q ss_conf 17999999995899499997899999988484069998799--------964199999994993-6998266
Q 000355 1504 APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--------FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1504 spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--------fSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
+|++++|++|+.||+|++||++++ +.+.++.+|.+.|.+ |+|++++|+||+.|+ |++|+++
T Consensus 317 s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 317 TQNDEYILSGSKDRGVLFWDKKSG--NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCCEEEEEECCCEEEEEECCCC--CEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEE
T ss_conf 899999999969897999999999--6999996889978999984674258999999999189979997621
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-37 Score=267.70 Aligned_cols=337 Identities=19% Similarity=0.211 Sum_probs=249.2
Q ss_pred CCCCCCCCCCEE-CCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 023456999256-33899988899838997089977787479-7303785035676899999149998999515889875
Q 000355 1218 TSNLMKCEPWFW-FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1295 (1620)
Q Consensus 1218 ~~~~~~H~~~v~-~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1295 (1620)
..++.||.+.|. ++++++.+ |++|+.|+++++||.. ++++.++++|.++|++++|++++ .+++|+. |+
T Consensus 5 ~~tL~GH~~~vitc~~~~~~~-----l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~----D~ 74 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQFEDNY-----VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST----DR 74 (355)
T ss_dssp EEEEECCSSSCEEEEEEETTE-----EEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEET----TC
T ss_pred CEEECCCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-EEEEEEC----CC
T ss_conf 588898378869999988999-----9999189909999899993999997899988999986999-9999964----52
Q ss_pred EEEEEECCCCEEEEEEECCCCC--EEEEEEEECCCEE--EEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 7999958998499997147765--5699993089908--99279299996999925799703687643446899884212
Q 000355 1296 TVQKWELTRINCVSGYYGHEEV--VNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371 (1620)
Q Consensus 1296 tVrIWdl~tg~~i~~l~gH~~~--V~sIafs~~~~~L--aS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1371 (1620)
+|++|+....++......+... +....+.+++..+ ++.|++|++||+.++..................+
T Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~------- 147 (355)
T d1nexb2 75 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP------- 147 (355)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCT-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECC-------
T ss_conf 4432111111111111001111111111111232204554388868999856773001246520001000001-------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 24653211246778884897434982179877249989999977990999987899246886089965456875105765
Q 000355 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1451 (1620)
Q Consensus 1372 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~ 1451 (1620)
.....................++++.++++..|+.+++||+.+++.+....++.. .+.++++
T Consensus 148 ------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~ 209 (355)
T d1nexb2 148 ------------EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD------RIYSTIY 209 (355)
T ss_dssp ------------TTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS------CEEEEEE
T ss_pred ------------CCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCC------CCCCCCC
T ss_conf ------------1234012101100222100002563344211442044430131100011000123------3211111
Q ss_pred ECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 08976335765679988999905990999978999489999713775789981799999999589949999789999998
Q 000355 1452 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQ 1531 (1620)
Q Consensus 1452 ~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~ 1531 (1620)
. ++++.+++++.|+.|++||.+++..+..+.+|...|++++. +++++++|+.||+|++||+++. .
T Consensus 210 ~-----------~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~--~- 274 (355)
T d1nexb2 210 D-----------HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL-SDKFLVSAAADGSIRGWDANDY--S- 274 (355)
T ss_dssp E-----------TTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEE-CSSEEEEECTTSEEEEEETTTC--C-
T ss_pred C-----------CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC-CCCEEEEEECCCCCCCCCCCCC--C-
T ss_conf 1-----------21002101245636876301221111111111111111123-2100333201111111111111--1-
Q ss_pred CEEEECCCCCEE---EEEECCCEEEEEECCCEEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEE
Q ss_conf 848406999879---99641999999949936998266788989950000110012117987546489999924998999
Q 000355 1532 PTVFKGHTNGIS---GFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFL 1608 (1620)
Q Consensus 1532 ~~~l~gH~~~V~---afSpdg~~LaSgS~DgI~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLa 1608 (1620)
..+.+|...+. +++++++++++|+++.|++||+. +|+.. ..... +|.+.|++++|+|+ .+++
T Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~-----tg~~~------~~~~~--~~~~~V~~v~~~~~-~~~~ 339 (355)
T d1nexb2 275 -RKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR-----SGKLV------HANIL--KDADQIWSVNFKGK-TLVA 339 (355)
T ss_dssp -EEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETT-----TCCBC------CSCTT--TTCSEEEEEEEETT-EEEE
T ss_pred -EECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECC-----CCCEE------EEEEC--CCCCCEEEEEECCC-EEEE
T ss_conf -0001246882299998499989999809979999999-----99798------88845--89998999998399-1999
Q ss_pred EEECCCCEEEC
Q ss_conf 99189949991
Q 000355 1609 VGTEDGYLRLC 1619 (1620)
Q Consensus 1609 sgs~DG~IrIw 1619 (1620)
+++.||.++||
T Consensus 340 ~~s~dg~~~l~ 350 (355)
T d1nexb2 340 AVEKDGQSFLE 350 (355)
T ss_dssp EEESSSCEEEE
T ss_pred EEECCCCEEEE
T ss_conf 99898909999
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-37 Score=268.93 Aligned_cols=271 Identities=18% Similarity=0.287 Sum_probs=228.8
Q ss_pred CCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CC-----EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
Q ss_conf 69992563--3899988899838997089977787479-73-----0378503567689999914999899951588987
Q 000355 1223 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1223 ~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~-----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
+|.+.|++ ||++|++ |++|+ |+.+++||+. +. ......+|.+.|++++|+||+++|++|+. |
T Consensus 49 ~H~~~V~~v~fs~~g~~-----latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~----d 118 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRH-----VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----A 118 (337)
T ss_dssp CCSSCCCEEEECSSSSE-----EEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----S
T ss_pred CCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC----C
T ss_conf 99992899999899999-----99997-99889977367763311687640488996899998679988988612----3
Q ss_pred CEEEEEECCC--CEEEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 5799995899--84999971477655699993089908992--7929999699992579970368764344689988421
Q 000355 1295 GTVQKWELTR--INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1295 gtVrIWdl~t--g~~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
++|++||+.. .+....+.+|...|.+++|++++..++++ |+.|++||..++++......+.
T Consensus 119 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~--------------- 183 (337)
T d1gxra_ 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT--------------- 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS---------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------
T ss_conf 32111111111111111111111111111111111111111111111111111111111111111---------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
Q ss_conf 22465321124677888489743498217987724998999997799099998789924688608996545687510576
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1450 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva 1450 (1620)
..++++++++++..+++++.|+.+++||+++++.+..+. +...+.+++
T Consensus 184 -------------------------~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-------~~~~i~~l~ 231 (337)
T d1gxra_ 184 -------------------------DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------FTSQIFSLG 231 (337)
T ss_dssp -------------------------SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEEEE
T ss_pred -------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC-------CCCCEEEEE
T ss_conf -------------------------111101234443211223566553211111100000246-------666157999
Q ss_pred EECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 50897633576567998899990599099997899948999971377578998-17999999995899499997899999
Q 000355 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1451 ~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~ 1529 (1620)
++ ++++++++|+.|+.+++||+++++... ...|...|++++ +|++++|++|+.|+.|++||+.++
T Consensus 232 ~~-----------~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~-- 297 (337)
T d1gxra_ 232 YC-----------PTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG-- 297 (337)
T ss_dssp EC-----------TTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--
T ss_pred EC-----------CCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCC--
T ss_conf 71-----------530300000025642111111111000-0124565416999899999999948996999989999--
Q ss_pred CCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEEC
Q ss_conf 988484069998799--964199999994993-699826
Q 000355 1530 SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl 1565 (1620)
..+.. .+|...|.+ |+|++++|++|+.|+ |++|++
T Consensus 298 ~~~~~-~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 298 ASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEE-CCCCCCEEEEEEECCCCEEEEEECCCEEEEEEE
T ss_conf 79999-269998799999279999999908996999977
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.2e-37 Score=265.79 Aligned_cols=285 Identities=17% Similarity=0.242 Sum_probs=225.1
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE--EECCCE
Q ss_conf 303785035676899999149998999515889875799995899849999714776556999930899089--927929
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTL 1337 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La--S~DgtI 1337 (1620)
...++|+||.++|++++|+|++++|+||+. ||+|++||+.+++.+..+.+|...|.+++|+|++..++ +.|+++
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~----Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i 121 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQ----DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEEC----CCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEE
T ss_conf 652798887898889999899999999978----9955563102102579972465337756760121144310133201
Q ss_pred EEEECCCCCE----EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEE
Q ss_conf 9996999925----799703687643446899884212246532112467788848974349821798772499899999
Q 000355 1338 HVWNSQTGKL----LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1338 ~IWD~~tg~~----i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsg 1413 (1620)
++|+...... ...+..+. . .........+..+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~------------------------------~-----------~~~~~~~~~~~~~~~~ 160 (340)
T d1tbga_ 122 SIYNLKTREGNVRVSRELAGHT------------------------------G-----------YLSCCRFLDDNQIVTS 160 (340)
T ss_dssp EEEESSSSCSCCCEEEEECCCS------------------------------S-----------CEEEEEEEETTEEEEE
T ss_pred ECCCCCCCCCCCCCCEECCCCC------------------------------C-----------CCCCCCCCCCCCCCCC
T ss_conf 0133222212221110013542------------------------------1-----------1011111111111111
Q ss_pred ECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf 77990999987899246886089965456875105765089763357656799889999059909999789994899997
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1414 s~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~ 1493 (1620)
..|.....++............... .+....+. +.+.++++|+.|+.|++||+++++++..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----------~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~ 223 (340)
T d1tbga_ 161 SGDTTCALWDIETGQQTTTFTGHTG------DVMSLSLA-----------PDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp ETTTEEEEEETTTTEEEEEEECCSS------CEEEEEEC-----------TTSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCE------EEEEECCC-----------CCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 2445432001232211111233101------57630012-----------442126876057369999999994889995
Q ss_pred CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECCCCC
Q ss_conf 1377578998-1799999999589949999789999998848406999879--9964199999994993-6998266788
Q 000355 1494 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSA 1569 (1620)
Q Consensus 1494 ~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgS~Dg-I~vwdl~~~~ 1569 (1620)
+|...|++++ +|++++|++|+.|+.|++||++............+...+. +|+++++++++|+.|+ |++||+.
T Consensus 224 ~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~--- 300 (340)
T d1tbga_ 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL--- 300 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETT---
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC---
T ss_conf 78898589999799899999969996999752122111111122445745899998999999999797989999999---
Q ss_pred CCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 989950000110012117987546489999924998999991899499919
Q 000355 1570 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1570 ~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
.+... ... . +|.+.|++++|+|++++|++||.||.|+|||
T Consensus 301 --~~~~~------~~~-~--~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 301 --KADRA------GVL-A--GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp --TCCEE------EEE-C--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --CCCEE------EEE-C--CCCCCEEEEEEECCCCEEEEECCCCEEEEEC
T ss_conf --99398------998-4--8999789999908999999990699799859
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-37 Score=265.45 Aligned_cols=319 Identities=20% Similarity=0.293 Sum_probs=253.5
Q ss_pred CCCCCCCCCCEE-CCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 023456999256-33899988899838997089977787479-7303785035676899999149998999515889875
Q 000355 1218 TSNLMKCEPWFW-FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1295 (1620)
Q Consensus 1218 ~~~~~~H~~~v~-~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1295 (1620)
...+.||++.|. +++++|++ |+|||.|+++++||+. +++++++++|.+.|.+++|+++ ++++|+. |+
T Consensus 9 ~~~l~GH~~~V~s~~~~~g~~-----l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~----D~ 77 (342)
T d2ovrb2 9 PKVLKGHDDHVITCLQFCGNR-----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGST----DR 77 (342)
T ss_dssp CEEEECSTTSCEEEEEEETTE-----EEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEET----TS
T ss_pred CEEECCCCCCEEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEE----CC
T ss_conf 889888687509999978999-----999918990999989999799999488999899994798--6321000----00
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999589984999971477655699993089908992792999969999257997036876434468998842122465
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1296 tVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
++++|+............+...+............+..|+++.+|+..+++....+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~------------------ 139 (342)
T d2ovrb2 78 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA------------------ 139 (342)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC------------------
T ss_pred CCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCC------------------
T ss_conf 11111111000000012333047652024652212344403787403556300111001111------------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
Q ss_conf 32112467788848974349821798772499899999779909999878992468860899654568751057650897
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~ 1455 (1620)
..........+++++.|+.+++||....+.+..+.++... +.+..
T Consensus 140 ------------------------~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~------~~~~~----- 184 (342)
T d2ovrb2 140 ------------------------VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR------VYSLQ----- 184 (342)
T ss_dssp ------------------------EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC------EEEEE-----
T ss_pred ------------------------CEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCC------CCCCC-----
T ss_conf ------------------------0000013330243358986999525234366787275444------21006-----
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEE
Q ss_conf 63357656799889999059909999789994899997137757899817999999995899499997899999988484
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVF 1535 (1620)
Q Consensus 1456 ~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l 1535 (1620)
+++..+++|+.||.|++||+++++++..+.+|...+.+++ ++++++++|+.|+.|++||+... .....+
T Consensus 185 --------~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~ 253 (342)
T d2ovrb2 185 --------FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTG--QCLQTL 253 (342)
T ss_dssp --------ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-EETTEEEEEETTSCEEEEETTTC--CEEEEE
T ss_pred --------CCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEE-CCCCEEEEECCCCEEEEEECCCC--CCCCCC
T ss_conf --------8999999995899399952556536567416653205770-68999999748988999865544--221112
Q ss_pred EC---CCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 06---9998799964199999994993-6998266788989950000110012117987546489999924998999991
Q 000355 1536 KG---HTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT 1611 (1620)
Q Consensus 1536 ~g---H~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs 1611 (1620)
.+ |...+.+++++++++++|+.|+ |++|++. +|+... .+..... .+|.+.|++++|+|++.++++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~-----tg~~i~---~~~~~~~-~~~~~~v~~v~~s~~~~~la~g~ 324 (342)
T d2ovrb2 254 QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK-----TGEFIR---NLVTLES-GGSGGVVWRIRASNTKLVCAVGS 324 (342)
T ss_dssp CSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETT-----TCCEEE---EEEECTT-GGGTCEEEEEEECSSEEEEEEEC
T ss_pred CCCCEEEECEEECCCCCCEEEEECCCCEEEEEECC-----CCCEEE---EEECCCC-CCCCCCEEEEEECCCCCEEEEEE
T ss_conf 21000110100001379844999089989999999-----997989---9862347-89889789999879998999996
Q ss_pred CCCC----EEECC
Q ss_conf 8994----99919
Q 000355 1612 EDGY----LRLCC 1620 (1620)
Q Consensus 1612 ~DG~----IrIwd 1620 (1620)
.||+ |++||
T Consensus 325 ~dGt~~~~l~~~D 337 (342)
T d2ovrb2 325 RNGTEETKLLVLD 337 (342)
T ss_dssp SSSSSCCEEEEEE
T ss_pred CCCCCEEEEEEEE
T ss_conf 8999704899993
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1e-36 Score=264.24 Aligned_cols=319 Identities=12% Similarity=0.065 Sum_probs=211.8
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEECC-C--CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCE
Q ss_conf 33899988899838997089977787479-7--30378503567689999914999899951588987579999589984
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-A--SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1306 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~iWd~~-~--~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~ 1306 (1620)
+||||+.+ +++|+.|+.+++|+.. + .++.+++||.++|++++|+|++++|++|+. |++|++||+.++.
T Consensus 14 ~~s~dg~~-----la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~----D~~i~vWd~~~~~ 84 (371)
T d1k8kc_ 14 AWNKDRTQ-----IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT----DRNAYVWTLKGRT 84 (371)
T ss_dssp EECTTSSE-----EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET----TSCEEEEEEETTE
T ss_pred EECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC----CCEEEEEEECCCC
T ss_conf 99899999-----99994889899998889978999995588998889999799999999979----9939998620332
Q ss_pred EE--EEEECCCCCEEEEEEEECCCEEE--EECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99--99714776556999930899089--927929999699992579970368764344689988421224653211246
Q 000355 1307 CV--SGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382 (1620)
Q Consensus 1307 ~i--~~l~gH~~~V~sIafs~~~~~La--S~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1382 (1620)
.. ..+.+|...|++++|+|++..++ +.|+++++|+...+.......... .
T Consensus 85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~--------------------------~ 138 (371)
T d1k8kc_ 85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK--------------------------K 138 (371)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC--------------------------T
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCC--------------------------C
T ss_conf 11001223221100011111112110000025763025442033433111001--------------------------0
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCC------------CCCCCCCCCCEEE
Q ss_conf 7788848974349821798772499899999779909999878992468860899------------6545687510576
Q 000355 1383 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP------------TELGFPSLVSAIC 1450 (1620)
Q Consensus 1383 ~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~------------~~i~~~~~V~sva 1450 (1620)
.+. ..+++++++|++..+++|+.|+++++||.............. ....+...+.+++
T Consensus 139 ~~~----------~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 208 (371)
T d1k8kc_ 139 PIR----------STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 208 (371)
T ss_dssp TCC----------SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred CCC----------CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
T ss_conf 111----------2221111111111100013476799984015764310012211111111011244047667478987
Q ss_pred EECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 50897633576567998899990599099997899948999971377578998-17999999995899499997899999
Q 000355 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1451 ~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~ 1529 (1620)
|+ |+++.+++++.|+.|++||..++..+..+.+|..+|++++ +|++.++++|+ |+.+++|.....
T Consensus 209 ~s-----------~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~-- 274 (371)
T d1k8kc_ 209 FS-----------ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSA-- 274 (371)
T ss_dssp EC-----------SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETT--
T ss_pred EE-----------CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEC-CCCEEEEEEECC--
T ss_conf 51-----------2332100001478605886410121000001466520365469997999981-992678776089--
Q ss_pred CCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCC----
Q ss_conf 988484069998799964199999994993-699826678898995000011001211798754648999992499----
Q 000355 1530 SQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS---- 1604 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg---- 1604 (1620)
.....+.++..........+ .+... ...++... ...+.. ..... ....|.+.|+++++++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~----~~~~~--~~~~H~~~I~~i~~~~~~~~~~ 341 (371)
T d1k8kc_ 275 AGKLSFGGRLDVPKQSSQRG-----LTARERFQNLDKKA--SSEGSA----AAGAG--LDSLHKNSVSQISVLSGGKAKC 341 (371)
T ss_dssp TTEEEECCCCCCC-------------CHHHHHHHCCCCC---------------CC--CSSSSSSCEEEEEEEESTTTSC
T ss_pred CCEEEEEEEECCCCCCCCCC-----CCCEEEEECCCCEE--EEECCC----CCCCE--ECCCCCCCEEEEEEECCCCCCE
T ss_conf 86288720206765421246-----22001685065205--871245----56614--1255569889999948998656
Q ss_pred CEEEEEECCCCEEECC
Q ss_conf 8999991899499919
Q 000355 1605 RLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1605 ~lLasgs~DG~IrIwd 1620 (1620)
..|+|+|.||.|+||+
T Consensus 342 ~~~~T~g~Dg~v~iW~ 357 (371)
T d1k8kc_ 342 SQFCTTGMDGGMSIWD 357 (371)
T ss_dssp SEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCEEEEEE
T ss_conf 7999991899399996
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=8.5e-37 Score=264.83 Aligned_cols=268 Identities=18% Similarity=0.182 Sum_probs=207.8
Q ss_pred ECCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEE
Q ss_conf 633899988899838997089977787479-7303785035676899999149998999515889875799995899849
Q 000355 1229 WFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1307 (1620)
Q Consensus 1229 ~~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~ 1307 (1620)
.+++|+|.. ++.++ ++.+.+|+++ ....+.+.+|.+.|++++|+|+|+++++|+. |++|++||+.+++.
T Consensus 23 ~a~~~~g~~-----l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~----dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 23 LGNTPAGDK-----IQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV----HGNVRIWDTTQTTH 92 (311)
T ss_dssp CEECTTSSE-----EEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEESSSTTC
T ss_pred EEECCCCCE-----EEEEE-CCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCC----CCEEEEEEEECCCC
T ss_conf 999699899-----99996-999999999999661797478888899999489996722556----73674663101111
Q ss_pred --EEEEECCCCCEEEEEEEECCCEEEEE----CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --99971477655699993089908992----792999969999257997036876434468998842122465321124
Q 000355 1308 --VSGYYGHEEVVNDICVLSSSGRIASC----DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNS 1381 (1620)
Q Consensus 1308 --i~~l~gH~~~V~sIafs~~~~~LaS~----DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~ 1381 (1620)
...+.+|.+.|.+++|++++..++++ |..+++|+..+++....+..|.
T Consensus 93 ~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~-------------------------- 146 (311)
T d1nr0a1 93 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA-------------------------- 146 (311)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCS--------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------------------
T ss_conf 000013433575433233311100011112211111111111111111111111--------------------------
Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCE-EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 6778884897434982179877249989-999977990999987899246886089965456875105765089763357
Q 000355 1382 NTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1460 (1620)
Q Consensus 1382 ~~~s~~v~sv~f~~~~vt~i~~s~dg~~-lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~ 1460 (1620)
.. +++++++++++. +++|+.|++|++||+++++....+..|. ..|.+++++
T Consensus 147 ----~~----------v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~------~~i~~v~~~-------- 198 (311)
T d1nr0a1 147 ----RA----------MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT------KFVHSVRYN-------- 198 (311)
T ss_dssp ----SC----------EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCS------SCEEEEEEC--------
T ss_pred ----CC----------CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCC--------
T ss_conf ----11----------11111121110120001122111111111111111111111------111112347--------
Q ss_pred CCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE-------CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 656799889999059909999789994899997-------1377578998-17999999995899499997899999988
Q 000355 1461 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-------AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1461 g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~-------~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~ 1532 (1620)
|+++++++|+.|+.|++||.+++..+..+. +|.+.|++++ +|++++|++|+.||+|++||++++ +.+
T Consensus 199 ---p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~--~~~ 273 (311)
T d1nr0a1 199 ---PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL--KVE 273 (311)
T ss_dssp ---TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEE
T ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC--CEE
T ss_conf ---642212111111111000124464112221111111002465321024788999999937996999999999--699
Q ss_pred EEEECCCC---CEEEEEECCCEEEEEECCC-EEEEEC
Q ss_conf 48406999---8799964199999994993-699826
Q 000355 1533 TVFKGHTN---GISGFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1533 ~~l~gH~~---~V~afSpdg~~LaSgS~Dg-I~vwdl 1565 (1620)
.++..|.. .+.++.++++.+++++.|| |++||.
T Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~ 310 (311)
T d1nr0a1 274 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310 (311)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred EEEECCCCCCCEEEEEEECCCEEEEEECCCEEEEEEC
T ss_conf 9997999863329999951999999989997999958
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.7e-41 Score=295.89 Aligned_cols=153 Identities=17% Similarity=0.267 Sum_probs=132.4
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++.+.||+|+||+||+|++.... .....||||.+... ......++|. +|+.+|+.++|||||++
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 92 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPG---KREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNVIHL 92 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC------CCEEEEEEECCSS-CCHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEEECCC---CEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 004278569802788299999995799---78899999997844-5989999999--------99999985799888618
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++..++.+++|||||+| +|.+++.. ..+.+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 93 ~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 169 (299)
T d1jpaa_ 93 EGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKV 169 (299)
T ss_dssp EEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 9999628877999972279853002104-567999999999999999988988527983576150448988999--1998
Q ss_pred EECCCCCCC
Q ss_conf 504786557
Q 000355 262 CDKPLVGFN 270 (1620)
Q Consensus 262 ~DFGlar~~ 270 (1620)
+|||+|+..
T Consensus 170 ~DFGla~~~ 178 (299)
T d1jpaa_ 170 SDFGLSRFL 178 (299)
T ss_dssp CCC------
T ss_pred CCCCCCEEC
T ss_conf 884431575
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-41 Score=293.71 Aligned_cols=187 Identities=17% Similarity=0.175 Sum_probs=147.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++.+.||+|+||+||+|.+. .++..||||+++..... .+++. +|+.+|+.++|||||++
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~E~~il~~l~HpnIv~~ 78 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDTME---VEEFL--------KEAAVMKEIKHPNLVQL 78 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEG------GGTEEEEEEECCTTCSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEC------CCCEEEEEEEECCCCCH---HHHHH--------HHHHHHHHCCCCCEECC
T ss_conf 799398659820888089999999------99969999997776103---99999--------99999986799988267
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+++.+|+||||++ |+|.+++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 79 ~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 156 (287)
T d1opja_ 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 156 (287)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred CCCEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 75274578547876314676067775303554157999999999999978889878930576045768998999--2898
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 504786557877755588888855112366667542000000255553222343234
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g 318 (1620)
+|||+|+....... .....+.|++.|||||++.+..|+.++|+|+.|
T Consensus 157 ~DFG~a~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~G 203 (287)
T d1opja_ 157 ADFGLSRLMTGDTY----------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 203 (287)
T ss_dssp CCCCCTTTCCSSSS----------EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHH
T ss_pred CCCCCEEECCCCCC----------EEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHH
T ss_conf 32445465378872----------210355665466692787279998104302178
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.7e-35 Score=255.93 Aligned_cols=279 Identities=18% Similarity=0.243 Sum_probs=234.9
Q ss_pred CCCCCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
Q ss_conf 0234569992563--3899988899838997089977787479-730378503567689999914999899951588987
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
..++.||++.|++ |+|++.+ |++||.|+++++||.. +..+.++.+|.++|.+++|+|++.++++|+. |
T Consensus 48 ~~tL~GH~~~I~~l~~s~~~~~-----l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~----d 118 (340)
T d1tbga_ 48 RRTLRGHLAKIYAMHWGTDSRL-----LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL----D 118 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-----EEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEET----T
T ss_pred EEEECCCCCCEEEEEECCCCCE-----EEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECC----C
T ss_conf 2798887898889999899999-----999978995556310210257997246533775676012114431013----3
Q ss_pred CEEEEEECCCC----EEEEEEECCCCCEEEEEEEECCCEE-EEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 57999958998----4999971477655699993089908-992792999969999257997036876434468998842
Q 000355 1295 GTVQKWELTRI----NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1295 gtVrIWdl~tg----~~i~~l~gH~~~V~sIafs~~~~~L-aS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
+++++|+.... .....+.+|................ ...|.+...|+..............
T Consensus 119 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 184 (340)
T d1tbga_ 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-------------- 184 (340)
T ss_dssp CCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCS--------------
T ss_pred CEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------
T ss_conf 201013322221222111001354211011111111111111244543200123221111123310--------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 12246532112467788848974349821798772499899999779909999878992468860899654568751057
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sv 1449 (1620)
..+.+....+.+..+++|+.|+.|++||+++++++.++.+|. ..|+++
T Consensus 185 --------------------------~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~------~~i~~v 232 (340)
T d1tbga_ 185 --------------------------GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE------SDINAI 232 (340)
T ss_dssp --------------------------SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCS------SCEEEE
T ss_pred --------------------------EEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCC------CCEEEE
T ss_conf --------------------------157630012442126876057369999999994889995788------985899
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE--CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCC
Q ss_conf 65089763357656799889999059909999789994899997--1377578998-17999999995899499997899
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1450 a~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~--~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~ 1526 (1620)
+++ |+++++++|+.||.|++||.+....+..+. .+...|++++ +|++++|++|+.||+|++||+.+
T Consensus 233 ~~~-----------p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 301 (340)
T d1tbga_ 233 CFF-----------PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp EEC-----------TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT
T ss_pred EEC-----------CCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC
T ss_conf 997-----------998999999699969997521221111111224457458999989999999997979899999999
Q ss_pred CCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEE
Q ss_conf 999988484069998799--964199999994993-69982
Q 000355 1527 NWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwd 1564 (1620)
+ ..+.++.+|..+|++ |+|++++|++|+.|+ |++||
T Consensus 302 ~--~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 302 A--DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp C--CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred C--CEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEC
T ss_conf 9--39899848999789999908999999990699799859
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=7.5e-40 Score=285.94 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=132.1
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 3377723640156540079999994366664466308999981278777066-798988408991758885024886551
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNI 179 (1620)
.+.++|++.+.||+|+||+||+|++. .+++.||+|.+......... ...+. +|+.+|+.++||||
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~--------~E~~~l~~~~hpni 69 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDL------RLHRDVAVKVLRADLARDPSFYLRFR--------REAQNAAALNHPAI 69 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSTTTTCHHHHHHHH--------HHHHHHHTCCCTTB
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCC
T ss_conf 70620698689960899299999999------99989999998556646989999999--------99999985699988
Q ss_pred CCEEEEEEECC----EEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 35006999699----79999727998-98989862999999999999999999999999993991304779995375579
Q 000355 180 APVLGLLKTSG----LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 180 v~l~~~~~~~~----~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~ 254 (1620)
|++++++...+ .+|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.+
T Consensus 70 v~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~ 147 (277)
T d1o6ya_ 70 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 147 (277)
T ss_dssp CCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred CCCCCEEEECCCCCCEEEEEEECCCCCEEHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 7311435432688766999997788987101120--35899999999999999999999985795276346755665754
Q ss_pred CCEEEEEEECCCCCCC
Q ss_conf 9337999504786557
Q 000355 255 CWSWLYICDKPLVGFN 270 (1620)
Q Consensus 255 ~~~~iKI~DFGlar~~ 270 (1620)
+ ..+|+|||.++..
T Consensus 148 ~--~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 148 N--AVKVMDFGIARAI 161 (277)
T ss_dssp S--CEEECCCTTCEEC
T ss_pred C--CCEEEHHHHHHHH
T ss_conf 3--2010034443221
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-40 Score=286.50 Aligned_cols=151 Identities=17% Similarity=0.212 Sum_probs=128.3
Q ss_pred CCCEEEEE-CEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 77723640-15654007999999436666446630899998127877706679898840899175888502488655135
Q 000355 103 MTALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~-~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
.++|.+.+ +||+|+||+||+|.+.. ..++..||||.++.. .......+|. +|+.+|+.++|||||+
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~----~~~~~~vAvK~l~~~-~~~~~~~~~~--------~E~~il~~l~HpnIv~ 73 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRM----RKKQIDVAIKVLKQG-TEKADTEEMM--------REAQIMHQLDNPYIVR 73 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC-------CCEEEEEEEECSS-CCHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCEEECCCEEECCCCEEEEEEEEEC----CCCCEEEEEEEECHH-CCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 44718878487306080999999960----897689999998820-3978999999--------9999998679988806
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 00699969979999727998-98989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++++.+ +.+|+||||++| +|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 74 l~g~~~~-~~~~lvmE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~--~~K 149 (285)
T d1u59a_ 74 LIGVCQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YAK 149 (285)
T ss_dssp EEEEEES-SSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT--EEE
T ss_pred EEEEECC-CEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEE
T ss_conf 8656036-807999980789968997521-256999999999999999987899868810576764660454688--542
Q ss_pred EEECCCCCCC
Q ss_conf 9504786557
Q 000355 261 ICDKPLVGFN 270 (1620)
Q Consensus 261 I~DFGlar~~ 270 (1620)
|+|||+|+..
T Consensus 150 l~DFGla~~~ 159 (285)
T d1u59a_ 150 ISDFGLSKAL 159 (285)
T ss_dssp ECCCTTCEEC
T ss_pred ECCCHHHHCC
T ss_conf 0331342115
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-39 Score=284.20 Aligned_cols=145 Identities=18% Similarity=0.188 Sum_probs=124.8
Q ss_pred EECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEE
Q ss_conf 40156540079999994366664466308999981278777066798988408991758885024886551350069996
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l~~~~~~ 188 (1620)
.++||+|+||.||+|.... ...++.||||+++..........++. +|+.+|+.++|||||++++++.+
T Consensus 12 ~k~iG~G~fG~Vy~~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~~g~~~~ 79 (277)
T d1xbba_ 12 DKELGSGNFGTVKKGYYQM----KKVVKTVAVKILKNEANDPALKDELL--------AEANVMQQLDNPYIVRMIGICEA 79 (277)
T ss_dssp EEEEEECSSEEEEEEEEEC----SSSEEEEEEEEEC-----CHHHHHHH--------HHHHHHHTCCCTTBCCEEEEEES
T ss_pred CCCCCCCCCEEEEEEEECC----CCCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCEEEEEECC
T ss_conf 8783458782999999816----97385999999880108989999999--------99999986799898527777505
Q ss_pred CCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCC
Q ss_conf 997999972799-8989898629999999999999999999999999939913047799953755799337999504786
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI~DFGla 267 (1620)
+ ..++||||++ |+|.++++ ....+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+|
T Consensus 80 ~-~~~lvmE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~--~~kl~DFGla 154 (277)
T d1xbba_ 80 E-SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLS 154 (277)
T ss_dssp S-SEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTC
T ss_pred C-CEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC--CCCCCCHHHH
T ss_conf 9-7799997478896899975--225789999999999999997668747955677761131023567--5123413453
Q ss_pred CCC
Q ss_conf 557
Q 000355 268 GFN 270 (1620)
Q Consensus 268 r~~ 270 (1620)
+..
T Consensus 155 ~~~ 157 (277)
T d1xbba_ 155 KAL 157 (277)
T ss_dssp EEC
T ss_pred HHC
T ss_conf 313
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-39 Score=283.85 Aligned_cols=188 Identities=18% Similarity=0.194 Sum_probs=149.9
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.. .++..||||++...... ..++. +|+.+++.++|||||++
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~i~~~~~~---~~~~~--------~E~~~l~~l~HpnIv~~ 65 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAMS---EEDFI--------EEAEVMMKLSHPKLVQL 65 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEE-------TTTEEEEEEECCSSSSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEE-------CCCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 69958888982088829999998-------89999999998788676---89999--------99999996689975653
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++..++.+++||||++ |+|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 66 ~g~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~--~~Kl 142 (263)
T d1sm2a_ 66 YGVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKV 142 (263)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG--CEEE
T ss_pred CCEECCCCCEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCC--CEEE
T ss_conf 5243159933799983699918997520-134788999999999999987765316431044315326666887--7686
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 504786557877755588888855112366667542000000255553222343234335
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~ 321 (1620)
+|||+|+......... ...+.||..|||||++.+..|+..+|+|+.|++.
T Consensus 143 ~DFGla~~~~~~~~~~----------~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil 192 (263)
T d1sm2a_ 143 SDFGMTRFVLDDQYTS----------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192 (263)
T ss_dssp CSCC----------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CCCCHHEECCCCCCEE----------ECCEECCCCCCCHHHHCCCCCCCHHHHCCHHHHH
T ss_conf 5532100236887335----------0430017666785786079998403321059999
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3e-35 Score=254.16 Aligned_cols=287 Identities=14% Similarity=0.167 Sum_probs=215.8
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEEEECCCEE-EEECCC
Q ss_conf 730378503567689999914999899951588987579999589984999971-477655699993089908-992792
Q 000355 1259 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI-ASCDGT 1336 (1620)
Q Consensus 1259 ~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~-gH~~~V~sIafs~~~~~L-aS~Dgt 1336 (1620)
|...+++.||.++|++++|+||+++|+||+. |++|++||+.++++...+. +|...|++++|++++..+ ++.|++
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~----Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~ 77 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADA----EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDH 77 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTE
T ss_pred CCCCEECCCCCCCCEEEEECCCCCEEEEECC----CCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCEEECCCCEEE
T ss_conf 8613684888878289999799999999908----992999999999688998378877489988403311210231026
Q ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC
Q ss_conf 99996999925799703687643446899884212246532112467788848974349821798772499899999779
Q 000355 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1416 (1620)
Q Consensus 1337 I~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~D 1416 (1620)
+++|+........ .. ..... ....+.++.+++++..+++++ +
T Consensus 78 v~~~~~~~~~~~~-~~--------------------------~~~~~----------~~~~~~~~~~s~~g~~~~~~~-~ 119 (299)
T d1nr0a2 78 LKVVPAGGSGVDS-SK--------------------------AVANK----------LSSQPLGLAVSADGDIAVAAC-Y 119 (299)
T ss_dssp EEEECSSSSSSCT-TS--------------------------CCEEE----------CSSCEEEEEECTTSSCEEEEE-S
T ss_pred EEEECCCCCCCCC-CC--------------------------CCCCC----------CCCCCCCCCCCCCCCCCCCCC-C
T ss_conf 8873167762011-10--------------------------00111----------134432100112211111222-2
Q ss_pred CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE-EEECC
Q ss_conf 90999987899246886089965456875105765089763357656799889999059909999789994899-99713
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA-SWRAH 1495 (1620)
Q Consensus 1417 gtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~-~l~~H 1495 (1620)
+.+++|+.. +...... ...+.+++++ ++++++++|+.||.|++||+++++... ....|
T Consensus 120 ~~i~~~~~~--~~~~~~~--------~~~~~~~~~s-----------~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~ 178 (299)
T d1nr0a2 120 KHIAIYSHG--KLTEVPI--------SYNSSCVALS-----------NDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178 (299)
T ss_dssp SEEEEEETT--EEEEEEC--------SSCEEEEEEC-----------TTSCEEEEEETTSEEEEEEEETTEEEEEEEEEC
T ss_pred CCCCCCCCC--CCCCCCC--------CCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 222111111--1111011--------1123322111-----------111111111111111111111111111111111
Q ss_pred CCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCC-CCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 77578998-17999999995899499997899999-988484069998799--964199999994993-69982667889
Q 000355 1496 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP-SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSAD 1570 (1620)
Q Consensus 1496 ~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~-~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl~~~~~ 1570 (1620)
...|++++ +|+++++++++.|+.|++||+.++.. .....+.+|...|.+ |+|+++++++|+.|+ |++|++....
T Consensus 179 ~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~- 257 (299)
T d1nr0a2 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS- 257 (299)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC-
T ss_conf 1111111111111111111111111111111111111111111111111111246664513888289979999899997-
Q ss_pred CCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 89950000110012117987546489999924998999991899499919
Q 000355 1571 EDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1571 ~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
.. .... ....+...++++.| ++++.|++|+.||.|++||
T Consensus 258 --~~------~~~~--~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWd 296 (299)
T d1nr0a2 258 --DH------PIII--KGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWN 296 (299)
T ss_dssp --SC------CEEE--TTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEE
T ss_pred --CC------EEEE--ECCCCCCCEEEEEE-CCCCEEEEEECCCEEEEEE
T ss_conf --31------4898--34898896899997-7989999992899799994
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-39 Score=282.51 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=145.0
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.. .++..||||++...... .+++. +|+.+|+.++|||||++
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~~~~~~~~---~~~~~--------~E~~~l~~l~HpnIv~~ 73 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGSMS---PDAFL--------AEANLMKQLQHQRLVRL 73 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEE-------TTTEEEEEEEECTTSSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCCEEEEEEE-------CCCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89938867981079828999999-------99999999998647688---89999--------99999986799988578
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++. .+.+|+||||++ |+|.+++.......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~--~~Kl 150 (272)
T d1qpca_ 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKI 150 (272)
T ss_dssp EEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEC-CCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--CEEE
T ss_conf 73104-59769999957898288887514789887889999999999999999748954675642251562024--4042
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5047865578777555888888551123666675420000002555532223432343
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 319 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~ 319 (1620)
+|||+|+......... .....||+.|||||++....|+.++|+|+.|+
T Consensus 151 ~DFGla~~~~~~~~~~----------~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gv 198 (272)
T d1qpca_ 151 ADFGLARLIEDNEYTA----------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198 (272)
T ss_dssp CCCTTCEECSSSCEEC----------CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCC----------CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHH
T ss_conf 3410147735886442----------03567744445828983799982456452579
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.3e-39 Score=278.36 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=148.1
Q ss_pred CCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC--------
Q ss_conf 772364015654007999999436666446630899998127877706679898840899175888502488--------
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-------- 175 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-------- 175 (1620)
++|+++++||+|+||+||+|++. .+|+.||||+++.... ....+. +|+.+++.++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~------~~g~~vAvKvi~~~~~---~~~~~~--------~Ei~~l~~l~~~~~~~~~ 75 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDM------VNNTHVAMKIVRGDKV---YTEAAE--------DEIKLLQRVNDADNTKED 75 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSCHH---HHHHHH--------HHHHHHHHHHHTCCSHHH
T ss_pred CCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEECCCC---CHHHHH--------HHHHHHHHHCCHHHHHHH
T ss_conf 85799899750778189999999------9997999999834313---368999--------999999984014555554
Q ss_pred ---CCCCCCEEEEEEEC--CEEEEEEECCC--CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCC
Q ss_conf ---65513500699969--97999972799--898989862999999999999999999999999993-99130477999
Q 000355 176 ---HPNVAPVLGLLKTS--GLITSVIPKTP--YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPS 247 (1620)
Q Consensus 176 ---HpNIv~l~~~~~~~--~~~~LV~E~~~--gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~~IiHRDLKp~ 247 (1620)
|+||+++++++... ...+++++++. ++............+++..++.++.|++.||.|||+ .||+||||||+
T Consensus 76 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~ 155 (362)
T d1q8ya_ 76 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155 (362)
T ss_dssp HHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred HCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 22767647899876312565202343200035420000012234678689999999999999888764058646567705
Q ss_pred CEEECCCCC----EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 537557993----3799950478655787775558888885511236666754200000025555322234323433537
Q 000355 248 NVLLTDSCW----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 248 NILi~~~~~----~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf 323 (1620)
|||++.++. ..+|++|||.|+..... .....||+.|+|||++....|+.++|+|+.|++. +
T Consensus 156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~ 220 (362)
T d1q8ya_ 156 NVLMEIVDSPENLIQIKIADLGNACWYDEH--------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI-F 220 (362)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH-H
T ss_pred HEEEECCCCCCCCCEEEEEECCCCCCCCCC--------------CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHH-H
T ss_conf 705630576564430567531442123445--------------4223665210571321466777643201237899-9
Q ss_pred HHHH
Q ss_conf 8886
Q 000355 324 EYLL 327 (1620)
Q Consensus 324 ~yL~ 327 (1620)
+.++
T Consensus 221 el~~ 224 (362)
T d1q8ya_ 221 ELIT 224 (362)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9987
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.6e-35 Score=254.62 Aligned_cols=278 Identities=13% Similarity=0.128 Sum_probs=219.2
Q ss_pred CCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCC
Q ss_conf 567689999914999899951588987579999589984999971477655699993089908992--792999969999
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1345 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg 1345 (1620)
+.+.+.+++++|+|+.++.++ ++.|.+|++.+++....+.+|.+.|++++|+|++.+++++ ||+|++||+.++
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-----~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~ 90 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-----GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT 90 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-----TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST
T ss_pred CCCCEEEEEECCCCCEEEEEE-----CCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEECC
T ss_conf 788759999969989999996-----999999999999661797478888899999489996722556736746631011
Q ss_pred CEEE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC--CCCEEE
Q ss_conf 2579--970368764344689988421224653211246778884897434982179877249989999977--990999
Q 000355 1346 KLLS--VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG--NGSLRF 1421 (1620)
Q Consensus 1346 ~~i~--~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~--DgtIri 1421 (1620)
+... .+..|. ..+.+++|+++++.+++++. +..+++
T Consensus 91 ~~~~~~~~~~~~----------------------------------------~~v~~v~~s~d~~~l~~~~~~~~~~~~v 130 (311)
T d1nr0a1 91 THILKTTIPVFS----------------------------------------GPVKDISWDSESKRIAAVGEGRERFGHV 130 (311)
T ss_dssp TCCEEEEEECSS----------------------------------------SCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CCCCCCCCCCCC----------------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 110000134335----------------------------------------7543323331110001111221111111
Q ss_pred EECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 9878992468860899654568751057650897633576567998-899990599099997899948999971377578
Q 000355 1422 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS-WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1500 (1620)
Q Consensus 1422 WDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~-~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~ 1500 (1620)
|+..+++....+.+| ...|.+++|++ +++ .+++|+.||.|++||.++++....+.+|...|+
T Consensus 131 ~~~~~~~~~~~l~~h------~~~v~~v~~~~-----------~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~ 193 (311)
T d1nr0a1 131 FLFDTGTSNGNLTGQ------ARAMNSVDFKP-----------SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH 193 (311)
T ss_dssp EETTTCCBCBCCCCC------SSCEEEEEECS-----------SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEE
T ss_pred CCCCCCCCCCCCCCC------CCCCCCCCCCC-----------CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 111111111111111------11111111121-----------1101200011221111111111111111111111111
Q ss_pred EEE-ECCCCEEEEEECCCCEEEEECCCCCCC-----CCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCCC
Q ss_conf 998-179999999958994999978999999-----88484069998799--964199999994993-699826678898
Q 000355 1501 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPS-----QPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADE 1571 (1620)
Q Consensus 1501 sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~-----~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl~~~~~~ 1571 (1620)
++. +|+++++++++.|+.|++||..++... ......+|...|.+ |+|++++|++|+.|+ |++||+.
T Consensus 194 ~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~----- 268 (311)
T d1nr0a1 194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA----- 268 (311)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC-----
T ss_conf 123476422121111111110001244641122211111110024653210247889999999379969999999-----
Q ss_pred CCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 9950000110012117987546489999924998999991899499919
Q 000355 1572 DGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1572 ~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
++... + ....+......+.++.| ++..+++++.||.|++||
T Consensus 269 t~~~~----~--~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd 309 (311)
T d1nr0a1 269 TLKVE----K--TIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVN 309 (311)
T ss_dssp TTEEE----E--EEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEE
T ss_pred CCCEE----E--EEECCCCCCCEEEEEEE--CCCEEEEEECCCEEEEEE
T ss_conf 99699----9--99799986332999995--199999998999799995
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-39 Score=281.98 Aligned_cols=201 Identities=15% Similarity=0.160 Sum_probs=157.2
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.+.|+..+.||+|+||.||+|..+... ......||||++... .......+|+ +|+.+|+.++|||||++
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~--~~~~~~vAvK~~~~~-~~~~~~~~~~--------~E~~il~~l~H~nIv~~ 74 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKTSS--GKKEVPVAIKTLKAG-YTEKQRVDFL--------GEAGIMGQFSHHNIIRL 74 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTT-CCHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEECCC--CEEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899686159811779099999996899--878799999998844-5968999999--------99999985689878323
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+.+.+++||||+.+ ++.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~--~~Kl 151 (283)
T d1mqba_ 75 EGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKV 151 (283)
T ss_dssp EEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEECCCCEEEEEEECCCCCCHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC--EEEE
T ss_conf 6778338803899972135740222102-345420899999999999854121212342576564427888998--4998
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 50478655787775558888885511236666754200000025555322234323433537888
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL 326 (1620)
+|||+|+.......... ......||+.|||||++.+..|+.++|+|+.|++. ||.+
T Consensus 152 ~DFGla~~~~~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil-~el~ 207 (283)
T d1mqba_ 152 SDFGLSRVLEDDPEATY--------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM-WEVM 207 (283)
T ss_dssp CCCCC-------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH-HHHH
T ss_pred CCCCHHHCCCCCCCCCE--------EECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHH-HHHH
T ss_conf 45510300357876526--------74267777343488887049999735563448989-9999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-38 Score=276.11 Aligned_cols=153 Identities=20% Similarity=0.185 Sum_probs=127.0
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|.+..+.. .....||+|++... ...+..+++. +|+.+|+.++|||||++
T Consensus 8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~--~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 76 (317)
T d1xkka_ 8 ETEFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 76 (317)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECC------CCEEEEEEEECC-----CTHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCC--EEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 8999783198208992999999958998--89899999996513-4979999999--------99999986799888158
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+++ .++++|++. |+|.+.+.. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 77 ~g~~~~~~-~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~--~~kl 152 (317)
T d1xkka_ 77 LGICLTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKI 152 (317)
T ss_dssp EEEEESSS-EEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--EEEE
T ss_pred EEEEECCC-EEEEEEECCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCC--CEEE
T ss_conf 99996198-3699984268740101113-345799999999999999999999876950476212031167998--7586
Q ss_pred EECCCCCCC
Q ss_conf 504786557
Q 000355 262 CDKPLVGFN 270 (1620)
Q Consensus 262 ~DFGlar~~ 270 (1620)
+|||+|+..
T Consensus 153 ~DFGla~~~ 161 (317)
T d1xkka_ 153 TDFGLAKLL 161 (317)
T ss_dssp CCCSHHHHT
T ss_pred ECCCCCEEC
T ss_conf 025522233
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-38 Score=273.70 Aligned_cols=147 Identities=18% Similarity=0.178 Sum_probs=129.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|+++++||+|+||+||+|+. .++..||||.++..... ..+++ +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~l~~~~~~---~~~~~--------~Ev~~~~~l~HpnIv~~ 64 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMNLSHEKLVQL 64 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEE-------TTTEEEEEEEEESSSSC---HHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEE-------CCCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 69979968982078839999998-------89989999998747577---89999--------99999996689860158
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++.+++.+++||||++ |+|.+++.. ....+++..+..++.|+++||.|||+++|+||||||+|||++.++ .+||
T Consensus 65 ~g~~~~~~~~~iv~Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~--~~kl 141 (258)
T d1k2pa_ 65 YGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG--VVKV 141 (258)
T ss_dssp EEEECCSSSEEEEEECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCCEEEEEECCCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC--CEEE
T ss_conf 8998507816999970489938886410-246776899999999999999987546843466541358876998--4798
Q ss_pred EECCCCCCC
Q ss_conf 504786557
Q 000355 262 CDKPLVGFN 270 (1620)
Q Consensus 262 ~DFGlar~~ 270 (1620)
+|||+|+..
T Consensus 142 ~DfG~a~~~ 150 (258)
T d1k2pa_ 142 SDFGLSRYV 150 (258)
T ss_dssp CCCSSCCBC
T ss_pred CCCHHHEEC
T ss_conf 861442023
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.8e-34 Score=246.55 Aligned_cols=296 Identities=15% Similarity=0.186 Sum_probs=219.3
Q ss_pred EEEEEECCCCCE-EEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE--EECCCE
Q ss_conf 037850356768-99999149998999515889875799995899849999714776556999930899089--927929
Q 000355 1261 ILSSIRAHHGAL-RSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTL 1337 (1620)
Q Consensus 1261 ~l~tl~gH~~~V-~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La--S~DgtI 1337 (1620)
...+|+||.+.| +|++| ++++|+||+. |++|++||+.+++++.++.+|.+.|++++|++ ++.++ +.|++|
T Consensus 4 ~~~tL~GH~~~vitc~~~--~~~~l~tgs~----Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~-~~~l~s~s~D~~i 76 (355)
T d1nexb2 4 QRTTLRGHMTSVITCLQF--EDNYVITGAD----DKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRTV 76 (355)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEET----TTEEEEEETTTTEEEEEEECCSSCEEEEEEET-TTEEEEEETTCCE
T ss_pred CCEEECCCCCCCEEEEEE--CCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCC
T ss_conf 758889837886999998--8999999918----99099998999939999978999889999869-9999999645244
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 99969999257997036876434468998842122465321124677888489743498217987724998999997799
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~Dg 1417 (1620)
++|+...+++.......... .......+.+++..+++++.|+
T Consensus 77 ~iw~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~d~ 118 (355)
T d1nexb2 77 RVWDIKKGCCTHVFEGHNST--------------------------------------VRCLDIVEYKNIKYIVTGSRDN 118 (355)
T ss_dssp EEEETTTTEEEEEECCCSSC--------------------------------------EEEEEEEEETTEEEEEEEETTS
T ss_pred CCCCCCCCCCCCCCCCCCCC--------------------------------------CCCCCCCCCCCCCEEEEECCCC
T ss_conf 32111111111111001111--------------------------------------1111111112322045543888
Q ss_pred CEEEEECCCCCEEEEEECCCCCC----CCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf 09999878992468860899654----56875105765089763357656799889999059909999789994899997
Q 000355 1418 SLRFIDINQGQKLHLWRGEPTEL----GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1418 tIriWDl~tg~~i~~l~~~~~~i----~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~ 1493 (1620)
+|++||+.++............. ........+..............++++.++++..|+.+++||.++++.+....
T Consensus 119 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~ 198 (355)
T d1nexb2 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198 (355)
T ss_dssp EEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEE
T ss_conf 68999856773001246520001000001123401210110022210000256334421144204443013110001100
Q ss_pred CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCC
Q ss_conf 1377578998-17999999995899499997899999988484069998799964199999994993-699826678898
Q 000355 1494 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADE 1571 (1620)
Q Consensus 1494 ~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~~ 1571 (1620)
++...+.++. ++++..+++++.|++|++||.+++ .....+.+|...|.++.++++.+++|+.|+ |++||+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~----- 271 (355)
T d1nexb2 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAN----- 271 (355)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETT-----
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC--CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC-----
T ss_conf 01233211111121002101245636876301221--11111111111111112321003332011111111111-----
Q ss_pred CCCCEEECCCEEEECCCCCCCCCEEE-EEEECCCCEEEEEECCCCEEECC
Q ss_conf 99500001100121179875464899-99924998999991899499919
Q 000355 1572 DGQHRLVPQKLYMVDNGAKNLSVLSS-ISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1572 ~g~~~~~~~kl~~~~~g~~h~~~V~s-vafsPdg~lLasgs~DG~IrIwd 1620 (1620)
++.. .... |...+.+ .+++++++++++|+ ||.|++||
T Consensus 272 ~~~~------~~~~-----~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd 309 (355)
T d1nexb2 272 DYSR------KFSY-----HHTNLSAITTFYVSDNILVSGS-ENQFNIYN 309 (355)
T ss_dssp TCCE------EEEE-----ECTTCCCCCEEEECSSEEEEEE-TTEEEEEE
T ss_pred CCCE------ECCC-----CCCCCEEEEEECCCCCEEEEEE-CCEEEEEE
T ss_conf 1110------0012-----4688229999849998999980-99799999
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-38 Score=277.49 Aligned_cols=152 Identities=18% Similarity=0.197 Sum_probs=129.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|++.... ..+..||||.+... ........+. +|+.+|+.++|||||++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~---~~~~~vaik~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 73 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNC-TSDSVREKFL--------QEALTMRQFDHPHIVKL 73 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC-----CCEEEEEEECTTT-TSHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCCEEEEEEEECCC---CEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899698779930788299999993699---64499999993656-6879999999--------99999986899998569
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++. .+.+|+||||++ |+|.+++.. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~~~~~-~~~~~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~--~~Kl 149 (273)
T d1mp8a_ 74 IGVIT-ENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKL 149 (273)
T ss_dssp EEEEC-SSSCEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEE
T ss_pred EEEEE-CCEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 88995-3747999984069807765422-478999999999999998775230226744141026553206789--6787
Q ss_pred EECCCCCCC
Q ss_conf 504786557
Q 000355 262 CDKPLVGFN 270 (1620)
Q Consensus 262 ~DFGlar~~ 270 (1620)
+|||+|+..
T Consensus 150 ~DfG~a~~~ 158 (273)
T d1mp8a_ 150 GDFGLSRYM 158 (273)
T ss_dssp CC-------
T ss_pred CCCHHHEEC
T ss_conf 650342133
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.1e-38 Score=272.76 Aligned_cols=197 Identities=16% Similarity=0.133 Sum_probs=148.9
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|+..-. ....++..||||++... ...+...++. +|+.+|+.++||||+++
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~-~~~~~~~~vAvK~i~~~-~~~~~~~~~~--------~E~~il~~l~h~niv~~ 81 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDNPNIVKL 81 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETS-STTSSEEEEEEEECCTT-CCHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEECCC-CCCCCCEEEEEEEECHH-CCHHHHHHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 88938867982078839999998887-65778829999998821-0857999999--------99999996689976552
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 069996997999972799-89898986299----------------------9999999999999999999999993991
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGI 239 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~~I 239 (1620)
++++...+.+++||||++ |+|.+++.... ...++...+..++.|++.||.|||+++|
T Consensus 82 ~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i 161 (301)
T d1lufa_ 82 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF 161 (301)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 46660598038999815899299999852755421000011100121034678898999999999999998554135786
Q ss_pred EECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 30477999537557993379995047865578777555888888551123666675420000002555532223432343
Q 000355 240 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 319 (1620)
Q Consensus 240 iHRDLKp~NILi~~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~ 319 (1620)
+||||||+|||++.++ .+||+|||+|+.......... .+...+++.|||||++.+..|+..+|+|+.|+
T Consensus 162 vHrDlKp~NILld~~~--~~Kl~DFGls~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gv 230 (301)
T d1lufa_ 162 VHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKA---------DGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 230 (301)
T ss_dssp CCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCBC-------------CCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred EEEEECCCCEEECCCC--CEEECCCHHHEECCCCCCCCC---------CCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHH
T ss_conf 8548840116898999--289833144211367764111---------57777676767989972688980563025236
Q ss_pred C
Q ss_conf 3
Q 000355 320 L 320 (1620)
Q Consensus 320 i 320 (1620)
+
T Consensus 231 v 231 (301)
T d1lufa_ 231 V 231 (301)
T ss_dssp H
T ss_pred H
T ss_conf 2
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.3e-34 Score=245.59 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=147.0
Q ss_pred CCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCE--EEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEECC
Q ss_conf 567689999914999899951588987579999589984--999971477655699993089908992--7929999699
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~--~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~ 1343 (1620)
+.++|+|++|+||++++++|+. |+.|++||..+++ ++..++||.+.|++++|+|++.+++++ |++|++||+.
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~----~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~ 81 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPN----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECS----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEC----CCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEC
T ss_conf 9988389999899999999948----898999988899789999955889988899997999999999799939998620
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 99257997036876434468998842122465321124677888489743498217987724998999997799099998
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1423 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWD 1423 (1620)
++.....+.... +. ..++++.|+|+++.+++|+.|+++++|+
T Consensus 82 ~~~~~~~~~~~~----------------------------~~----------~~v~~i~~~p~~~~l~~~s~d~~i~i~~ 123 (371)
T d1k8kc_ 82 GRTWKPTLVILR----------------------------IN----------RAARCVRWAPNEKKFAVGSGSRVISICY 123 (371)
T ss_dssp TTEEEEEEECCC----------------------------CS----------SCEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred CCCCCCCCCCCC----------------------------CC----------CCCCCCCCCCCCCCCEEECCCCCCEEEE
T ss_conf 332110012232----------------------------21----------1000111111121100000257630254
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC-----------------
Q ss_conf 789924688608996545687510576508976335765679988999905990999978999-----------------
Q 000355 1424 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG----------------- 1486 (1620)
Q Consensus 1424 l~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg----------------- 1486 (1620)
............... .+...|.+++|+ |++.++++|+.|+++++||....
T Consensus 124 ~~~~~~~~~~~~~~~--~~~~~v~~v~~~-----------p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 190 (371)
T d1k8kc_ 124 FEQENDWWVCKHIKK--PIRSTVLSLDWH-----------PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 190 (371)
T ss_dssp EETTTTEEEEEEECT--TCCSCEEEEEEC-----------TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCT
T ss_pred EECCCCCCCCCCCCC--CCCCCCCCCCCC-----------CCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 420334331110010--111222111111-----------1111100013476799984015764310012211111111
Q ss_pred -CEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCCEEE
Q ss_conf -48999971377578998-17999999995899499997899999988484069998799--964199999994993699
Q 000355 1487 -NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNKIGL 1562 (1620)
Q Consensus 1487 -~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgS~DgI~v 1562 (1620)
..+....+|...|.+++ +|+++.+++++.|++|++||+.++ ..+..+.+|..+|.+ |+++++++++|+++.+.+
T Consensus 191 ~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~ 268 (371)
T d1k8kc_ 191 GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK--MAVATLASETLPLLAVTFITESSLVAAGHDCFPVL 268 (371)
T ss_dssp TCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEE
T ss_pred EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECC--CCEEEEECCCCCCEEEEECCCCCEEEEECCCCEEE
T ss_conf 0112440476674789875123321000014786058864101--21000001466520365469997999981992678
Q ss_pred EECC
Q ss_conf 8266
Q 000355 1563 SSLS 1566 (1620)
Q Consensus 1563 wdl~ 1566 (1620)
|...
T Consensus 269 ~~~~ 272 (371)
T d1k8kc_ 269 FTYD 272 (371)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 7760
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=7.5e-34 Score=244.51 Aligned_cols=279 Identities=11% Similarity=0.133 Sum_probs=218.8
Q ss_pred CCCCCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEE-ECCCCCEEEEEECCCCCEEEEECCCCCC
Q ss_conf 0234569992563--3899988899838997089977787479-7303785-0356768999991499989995158898
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSI-RAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1218 ~~~~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl-~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
..++.||.+.|++ |+||+++ |++||.|+++++||++ +..++++ .+|.+.|++++|+++++++++++
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~~-----l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~----- 74 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGKT-----LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW----- 74 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET-----
T ss_pred CEECCCCCCCCEEEEECCCCCE-----EEEECCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCEEECCCC-----
T ss_conf 3684888878289999799999-----999908992999999999688998378877489988403311210231-----
Q ss_pred CCEEEEEECCCCEE---EEEEECCCCCEEEEEEEECCCEE-EEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 75799995899849---99971477655699993089908-992792999969999257997036876434468998842
Q 000355 1294 KGTVQKWELTRINC---VSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1294 DgtVrIWdl~tg~~---i~~l~gH~~~V~sIafs~~~~~L-aS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
|+++++|+...... ......|...+.+++|++++..+ +++++.+++|+.. +.......
T Consensus 75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~--~~~~~~~~---------------- 136 (299)
T d1nr0a2 75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG--KLTEVPIS---------------- 136 (299)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT--EEEEEECS----------------
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC----------------
T ss_conf 026887316776201110001111344321001122111112222222111111--11110111----------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 12246532112467788848974349821798772499899999779909999878992468860899654568751057
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sv 1449 (1620)
...++++++++++.+++|+.|+.+++||+++++....... .|...|.++
T Consensus 137 --------------------------~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~-----~~~~~i~~~ 185 (299)
T d1nr0a2 137 --------------------------YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTI-----VHPAEITSV 185 (299)
T ss_dssp --------------------------SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEE-----ECSSCEEEE
T ss_pred --------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCC
T ss_conf --------------------------1233221111111111111111111111111111111111-----111111111
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE---EEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECC
Q ss_conf 65089763357656799889999059909999789994899---9971377578998-1799999999589949999789
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA---SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLR 1525 (1620)
Q Consensus 1450 a~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~---~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~ 1525 (1620)
+++ ++++++++|+.|+.|++||..++..+. .+.+|...|++++ +|+++++++|+.|++|++||++
T Consensus 186 ~~~-----------~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~ 254 (299)
T d1nr0a2 186 AFS-----------NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 254 (299)
T ss_dssp EEC-----------TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECC
T ss_conf 111-----------111111111111111111111111111111111111111111246664513888289979999899
Q ss_pred CCCCCCCEEEECCC-CCEEE-EEECCCEEEEEECCC-EEEEECC
Q ss_conf 99999884840699-98799-964199999994993-6998266
Q 000355 1526 RNWPSQPTVFKGHT-NGISG-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1526 ~~~~~~~~~l~gH~-~~V~a-fSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
++..........|. ..+.+ +++++..|++++.|+ |++||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp CTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECC
T ss_conf 99731489834898896899997798999999289979999444
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3e-36 Score=261.03 Aligned_cols=206 Identities=15% Similarity=0.039 Sum_probs=163.6
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC-CCCCC
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886-55135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-PNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIv~ 181 (1620)
.++|++++.||+|+||+||+|++. .+++.||||.+....... ++. +|++.++.+.| +||+.
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~~~----~~~--------~e~~~~~~l~~~~~i~~ 65 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNL------LNNQQVAIKFEPRRSDAP----QLR--------DEYRTYKLLAGCTGIPN 65 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEET------TTTEEEEEEEEECCTTSC----CHH--------HHHHHHHHTTTCTTCCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCCH----HHH--------HHHHHHHHHCCCCCCCE
T ss_conf 980699799841788299999998------899799999975025829----999--------99999999648999877
Q ss_pred EEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC-----CCC
Q ss_conf 006999699799997279989898986299999999999999999999999999399130477999537557-----993
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-----SCW 256 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~-----~~~ 256 (1620)
+++++......++||||++++|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++. ++
T Consensus 66 ~~~~~~~~~~~~~vme~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~- 143 (293)
T d1csna_ 66 VYYFGQEGLHNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN- 143 (293)
T ss_dssp EEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTT-
T ss_pred EEEEEECCCCCEEEEEECCCCHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCC-
T ss_conf 9999601881179999648887999975-20311068999999999999999997796626677131523475434479-
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 379995047865578777555888888551123666675420000002555532223432343353788863001459
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 257 ~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL~~ln~~~g 334 (1620)
.+||+|||+|+............ ........||+.|||||++.+..|+..+|+|+.|.+. |+.+++..++.|
T Consensus 144 -~vkl~DFG~a~~~~~~~~~~~~~----~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l-~elltg~~Pf~~ 215 (293)
T d1csna_ 144 -MIYVVDFGMVKFYRDPVTKQHIP----YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF-MYFLRGSLPWQG 215 (293)
T ss_dssp -CEEECCCTTCEESBCTTTCCBCC----CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTSS
T ss_pred -CEEECCCCEEEECCCCCCCCCEE----ECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHH-HHHHHCCCCCCC
T ss_conf -56872366057714676654111----0246762775102679896488888699989831999-999869876788
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-37 Score=265.43 Aligned_cols=195 Identities=17% Similarity=0.119 Sum_probs=146.5
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770667989884089917588850248-8655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIv~ 181 (1620)
.++|++++.||+|+||.||+|+.... ....++..||||+++... ......++. +|+.+++.+ +|||||+
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~-~~~~~~~~vAvK~i~~~~-~~~~~~~~~--------~E~~~~~~l~~HpnIv~ 91 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGL-IKSDAAMTVAVKMLKPSA-HLTEREALM--------SELKVLSYLGNHMNIVN 91 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESS-SSTTCEEEEEEEEECTTC-CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEEECC-CCCCCCEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHCCCCCCEEE
T ss_conf 89969854982068829999998066-447788699999987424-877999999--------99999876269998878
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf 0069996997999972799-89898986299----------------999999999999999999999999399130477
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 244 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~----------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDL 244 (1620)
+++++.+.+.+++|||||+ |+|.++++... ...+++..++.++.||+.||.|||+++|+||||
T Consensus 92 ~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDL 171 (311)
T d1t46a_ 92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171 (311)
T ss_dssp EEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf 99898319978999973799879999985356654444453322233458899999999999999999887579266624
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99953755799337999504786557877755588888855112366667542000000255553222343234
Q 000355 245 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 245 Kp~NILi~~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g 318 (1620)
||+|||++.++ .+||+|||+++......... ....+.||+.|+|||++.+..++..+|+|+.|
T Consensus 172 Kp~NIl~~~~~--~~ki~DfG~~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G 234 (311)
T d1t46a_ 172 AARNILLTHGR--ITKICDFGLARDIKNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 234 (311)
T ss_dssp SGGGEEEETTT--EEEECCCGGGSCTTSCTTSE---------ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCCCCCCCC--CCCCCCCCHHEECCCCCCCE---------EEEECCCCHHHCCHHHHCCCCCCCCCCCCCHH
T ss_conf 10210000257--52102340102336788615---------86201359687677886179999740010258
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=270.67 Aligned_cols=157 Identities=18% Similarity=0.180 Sum_probs=132.7
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCC-CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCC
Q ss_conf 7772364015654007999999436666-44663089999812787770667989884089917588850248-865513
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG-CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIv 180 (1620)
.++|++++.||+|+||.||+|+.....+ ...++..||||+++.+ .......++. +|...+..+ +|||||
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~--------~e~~~l~~~~~HpnIv 82 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLI--------SEMEMMKMIGKHKNII 82 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHH--------HHHHHHHHHCCCTTBC
T ss_pred HHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHHCCCCEEE
T ss_conf 899697009851678289999985787555667549999998811-2868899999--------9999999813999697
Q ss_pred CEEEEEEECCEEEEEEECCC-CCHHHHHHHCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 50069996997999972799-89898986299--------------9999999999999999999999993991304779
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLK 245 (1620)
++++++.+++.+++||||++ |+|.++|+... ...+++..++.++.|++.||.|||+++|+|||||
T Consensus 83 ~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK 162 (299)
T d1fgka_ 83 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 162 (299)
T ss_dssp CEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred ECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 34652201886899997369990999998606776432223345743467999999999999999987663797863022
Q ss_pred CCCEEECCCCCEEEEEEECCCCCCC
Q ss_conf 9953755799337999504786557
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFN 270 (1620)
Q Consensus 246 p~NILi~~~~~~~iKI~DFGlar~~ 270 (1620)
|+|||++.++ .+||+|||+++..
T Consensus 163 p~NiLl~~~~--~~kl~dfg~~~~~ 185 (299)
T d1fgka_ 163 ARNVLVTEDN--VMKIADFGLARDI 185 (299)
T ss_dssp GGGEEECTTC--CEEECSTTCCCCG
T ss_pred CCCEEECCCC--CEEECCCHHHCCC
T ss_conf 1022454789--7676221110113
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-36 Score=259.41 Aligned_cols=208 Identities=17% Similarity=0.022 Sum_probs=156.8
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC-
Q ss_conf 3377723640156540079999994366664466308999981278777066798988408991758885024886551-
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV- 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI- 179 (1620)
++.++|++++.||+|+||.||+|++. .+++.||||.+....... ++. +|+++++.++|+|+
T Consensus 4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~~~----~~~--------~E~~i~~~l~~~~~i 65 (299)
T d1ckia_ 4 RVGNRYRLGRKIGSGSFGDIYLGTDI------AAGEEVAIKLECVKTKHP----QLH--------IESKIYKMMQGGVGI 65 (299)
T ss_dssp EETTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEESCTTSC----CHH--------HHHHHHHHSTTSTTC
T ss_pred EECCEEEEEEEEEECCCCEEEEEEEC------CCCCEEEEEEECHHCCCH----HHH--------HHHHHHHHCCCCCCC
T ss_conf 18888999689850788099999998------899899999972100588----899--------999999970389960
Q ss_pred CCEEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC-EE
Q ss_conf 35006999699799997279989898986299999999999999999999999999399130477999537557993-37
Q 000355 180 APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~-~~ 258 (1620)
+.+++++...+..++||||+++++.+.+.. ....+++..+..++.|++.||.|||+++|+||||||+|||++..+. ..
T Consensus 66 ~~~~~~~~~~~~~~ivme~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~ 144 (299)
T d1ckia_ 66 PTIRWCGAEGDYNVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL 144 (299)
T ss_dssp CCEEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC
T ss_pred CEEEEEEECCCEEEEEEEECCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCE
T ss_conf 179999951987789998738713332443-0688768999999999999999999799442667876606433577761
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99950478655787775558888885511236666754200000025555322234323433537888630014
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 259 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i~nf~yL~~ln~~ 332 (1620)
+||+|||+|+............ ........||+.|||||++.+..|+..+|+|+.|++. |+.+++-.++
T Consensus 145 vkl~DFG~a~~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l-~el~tg~~P~ 213 (299)
T d1ckia_ 145 VYIIDFGLAKKYRDARTHQHIP----YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL-MYFNLGSLPW 213 (299)
T ss_dssp EEECCCSSCEECBCTTTCCBCC----CCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH-HHHHHSSCTT
T ss_pred EEEECCCCCEECCCCCCCCCEE----CCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHH-HHHHHCCCCC
T ss_conf 5650467513425544554100----0135776787353299999189989832188617789-9998498766
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-38 Score=274.62 Aligned_cols=153 Identities=20% Similarity=0.158 Sum_probs=129.4
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCH-HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770-6679898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|+..... .....||||++....... +..++|. +|+.+|+.++|||||+
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~---~~~~~vAiK~l~~~~~~~~~~~~~~~--------~Ei~~l~~l~H~nIv~ 75 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPS---GKTVSVAVKCLKPDVLSQPEAMDDFI--------REVNAMHSLDHRNLIR 75 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTT---SCEEEEEEEC--------CHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEECCCCEEEEEEEEECCC---CCEEEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 489199789803888399999998899---90799999999835557989999999--------9999998689999878
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0069996997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
+++++.+ +.+++||||++ |++.+.+.. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 76 ~~g~~~~-~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~--~vk 151 (273)
T d1u46a_ 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LVK 151 (273)
T ss_dssp EEEEECS-SSCEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEE
T ss_pred EEEEEEE-CCHHEEEEEECCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCC--CEE
T ss_conf 9877740-100114654238612544421-268999999999999999999875217875205668881565565--433
Q ss_pred EEECCCCCCC
Q ss_conf 9504786557
Q 000355 261 ICDKPLVGFN 270 (1620)
Q Consensus 261 I~DFGlar~~ 270 (1620)
|+|||+++..
T Consensus 152 l~DfGl~~~~ 161 (273)
T d1u46a_ 152 IGDFGLMRAL 161 (273)
T ss_dssp ECCCTTCEEC
T ss_pred ECCCHHHHHC
T ss_conf 2561155530
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-37 Score=269.92 Aligned_cols=152 Identities=20% Similarity=0.197 Sum_probs=128.7
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770667989884089917588850248-8655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|+++.+ .....||||++... ...+....+. +|+.+|+.+ +|||||+
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~----~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~HpnIv~ 75 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIIN 75 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEET----TEEEEEEEEEEECC-------CHHH--------HHHHHHTTCCCCTTBCC
T ss_pred HHHCEEEEEEEECCCCEEEEEEECCC----CEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCEEE
T ss_conf 79968877982078828999999899----96999999997823-3857999999--------99999986228998836
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Q ss_conf 0069996997999972799-8989898629--------------999999999999999999999999939913047799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp 246 (1620)
+++++.+.+.+++||||++ |+|.++++.. ....+++..+..++.|++.||.|+|+++|+||||||
T Consensus 76 ~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp 155 (309)
T d1fvra_ 76 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 155 (309)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred EEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 78888418736999980289869999864035555512310123457899999999999999998766308954555052
Q ss_pred CCEEECCCCCEEEEEEECCCCCC
Q ss_conf 95375579933799950478655
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 247 ~NILi~~~~~~~iKI~DFGlar~ 269 (1620)
+|||++.++ .+||+|||+|+.
T Consensus 156 ~NIL~~~~~--~~kl~DfG~a~~ 176 (309)
T d1fvra_ 156 RNILVGENY--VAKIADFGLSRG 176 (309)
T ss_dssp GGEEECGGG--CEEECCTTCEES
T ss_pred CEEEECCCC--CEEECCCCCCCC
T ss_conf 048986887--638743443224
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-36 Score=260.28 Aligned_cols=191 Identities=17% Similarity=0.149 Sum_probs=142.7
Q ss_pred EEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 64015654007999999436666446630899998127877706679898840899175888502488655135006999
Q 000355 108 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 108 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l~~~~~ 187 (1620)
..+.||+|+||+||+|+..... .+...||||+++.. .......++. +|+++|+.++|||||++++++.
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~---~~~~~vAvK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~~~g~~~ 98 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRI-TDIGEVSQFL--------TEGIIMKDFSHPNVLSLLGICL 98 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC-------CEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHTCCCTTBCCCCEEEE
T ss_pred CCEEEEECCCEEEEEEEEECCC---CEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEEEEEEE
T ss_conf 6669813688099999997799---87999999998843-6978999999--------9999998678999867867898
Q ss_pred E-CCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECC
Q ss_conf 6-997999972799-89898986299999999999999999999999999399130477999537557993379995047
Q 000355 188 T-SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 188 ~-~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI~DFG 265 (1620)
. +..+++|||||+ |+|.+++.. .........+..++.|++.||.|+|+++|+||||||+|||+++++ .+||+|||
T Consensus 99 ~~~~~~~lv~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~--~~kL~DFG 175 (311)
T d1r0pa_ 99 RSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFG 175 (311)
T ss_dssp ETTTEEEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECSSG
T ss_pred ECCCCEEEEEEEEECCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCC--CEEEECCC
T ss_conf 069943899987406741442101-345404899999999988765200336762577668757677999--88991065
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8655787775558888885511236666754200000025555322234323433
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320 (1620)
Q Consensus 266 lar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~d~W~~g~i 320 (1620)
+++.......... .......||+.|+|||++....++..+|+|++|.+
T Consensus 176 ~~~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv 223 (311)
T d1r0pa_ 176 LARDMYDKEFDSV-------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223 (311)
T ss_dssp GGCCTTTTTCCCT-------TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred CHHHCCCCCCCCC-------EECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
T ss_conf 2322556655531-------00256555645567688743799974574661999
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-36 Score=259.24 Aligned_cols=195 Identities=15% Similarity=0.036 Sum_probs=150.6
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
..+|.+.+.||+|+||.||+|+. +|..||||++... ....+.++ +|+..+..++|||||++
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--------~g~~vAvK~~~~~-----~~~~~~~e------~ei~~~~~~~HpnIv~~ 62 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSR-----EERSWFRE------AEIYQTVMLRHENILGF 62 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--------TTEEEEEEEECGG-----GHHHHHHH------HHHHTSTTCCCTTBCCE
T ss_pred CCEEEEEEEEEECCCEEEEEEEE--------CCEEEEEEEECCC-----CHHHHHHH------HHHHHHHHCCCCCCCCE
T ss_conf 86899988982078819999999--------9989999998720-----04679999------99999962799868326
Q ss_pred EEEEEECC----EEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEECCCCCCCE
Q ss_conf 06999699----7999972799-898989862999999999999999999999999993--------9913047799953
Q 000355 183 LGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCPSNV 249 (1620)
Q Consensus 183 ~~~~~~~~----~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--------~~IiHRDLKp~NI 249 (1620)
++++.+.+ .+|+|||||+ |+|.++++. ..++......++.|++.||.|+|+ ++|+||||||+||
T Consensus 63 ~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NI 139 (303)
T d1vjya_ 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGE
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
T ss_conf 88998379860489999964669898999865---899989999999999999999887665204689866153173135
Q ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCC------CCCCCCCCCCCCCCCHH
Q ss_conf 755799337999504786557877755588888855112366667542000000255------55322234323433537
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM------DWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 250 Li~~~~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~~~~~d~W~~g~i~nf 323 (1620)
|++.++ .+||+|||+++........... ......||+.|||||++... .++.++|+|++|++. |
T Consensus 140 Ll~~~~--~~Kl~DFGl~~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl-~ 209 (303)
T d1vjya_ 140 LVKKNG--TCCIADLGLAVRHDSATDTIDI-------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-W 209 (303)
T ss_dssp EECTTS--CEEECCCTTCEEEETTTTEECC-----------CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHH-H
T ss_pred EECCCC--CEEEEECCCCCCCCCCCCCEEC-------CCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH-H
T ss_conf 786887--7688763866234677762001-------35525035476782210565454677767501220159999-9
Q ss_pred HHHHHH
Q ss_conf 888630
Q 000355 324 EYLLFL 329 (1620)
Q Consensus 324 ~yL~~l 329 (1620)
|.++..
T Consensus 210 el~tg~ 215 (303)
T d1vjya_ 210 EIARRC 215 (303)
T ss_dssp HHHHTB
T ss_pred HHHHCC
T ss_conf 996289
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-32 Score=233.51 Aligned_cols=284 Identities=16% Similarity=0.223 Sum_probs=211.6
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE--EECCCEE
Q ss_conf 03785035676899999149998999515889875799995899849999714776556999930899089--9279299
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLH 1338 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La--S~DgtI~ 1338 (1620)
.++...+|...|+|++| |+++|+||+. |++|++||+.++++++++++|.+.|++++| ++..++ +.|++|+
T Consensus 7 ~i~~~~~~~~~V~c~~~--d~~~l~sgs~----Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~ 78 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQY--DDQKIVSGLR----DNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 78 (293)
T ss_dssp CEECCCSSCCCEEEEEC--CSSEEEEEES----SSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEECCCCCCCCEEEEEE--CCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCCCCCCC
T ss_conf 98432899998899987--6999999928----993999999999199999267787763423--630021001110110
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 99699992579970368764344689988421224653211246778884897434982179877249989999977990
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~Dgt 1418 (1620)
+|+...+........... ...........++++..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~ 116 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCE------------------------------------------AVLHLRFNNGMMVTCSKDRS 116 (293)
T ss_dssp EEESSSCCEEEEECCCCS------------------------------------------CEEEEECCTTEEEEEETTSC
T ss_pred CCCCCCCCCCCCCCCCCC------------------------------------------CCCCCCCCCCCEEECCCCCC
T ss_conf 000024641001111110------------------------------------------00011111100000135663
Q ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 99998789924688608996545687510576508976335765679988999905990999978999489999713775
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1498 (1620)
Q Consensus 1419 IriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~ 1498 (1620)
+++||..+........... .+...+.+..+. +..+++++.|+.+++||.++++.+..+.++...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-------------~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~ 180 (293)
T d1p22a2 117 IAVWDMASPTDITLRRVLV---GHRAAVNVVDFD-------------DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180 (293)
T ss_dssp EEEEECSSSSCCEEEEEEC---CCSSCEEEEEEE-------------TTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEEECCCCCCCCCCCCCC---CCCCCCCCCEEC-------------CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCC
T ss_conf 0686134454442121000---113543110000-------------022011069986041007888388997155445
Q ss_pred EEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEE
Q ss_conf 7899817999999995899499997899999988484069998799964199999994993-699826678898995000
Q 000355 1499 VTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1577 (1620)
Q Consensus 1499 V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~ 1577 (1620)
+..+. +++..+++++.|++|++||+++. .......+|...+.++++++..+++|+.|+ |++|++..........
T Consensus 181 v~~~~-~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-- 255 (293)
T d1p22a2 181 IACLQ-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPA-- 255 (293)
T ss_dssp EEEEE-EETTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCT--
T ss_pred CCCCC-CCCCEEEEECCCCEEEEEECCCC--EEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCC--
T ss_conf 32216-89875887658998999866556--14665214310000014541079998679979999888886444567--
Q ss_pred ECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 0110012117987546489999924998999991899499919
Q 000355 1578 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1578 ~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
......... +|.+.|++++| ++.+|++||.||+|+|||
T Consensus 256 -~~~~~~~~~--~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 256 -GTLCLRTLV--EHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp -TTTEEEEEC--CCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred -CCEEEEEEC--CCCCCEEEEEE--CCCEEEEEECCCEEEEEC
T ss_conf -754557845--88998899997--199999992299899959
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-37 Score=265.75 Aligned_cols=156 Identities=18% Similarity=0.126 Sum_probs=131.5
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.++... ...++..||||+++.. ...+....+. +|+.+++.++|||||++
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~-~~~~~~~VAvK~~~~~-~~~~~~~~~~--------~E~~il~~l~h~nIv~~ 88 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVV-KDEPETRVAIKTVNEA-ASMRERIEFL--------NEASVMKEFNCHHVVRL 88 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEE-TTEEEEEEEEEECCTT-SCHHHHHHHH--------HHHHHGGGCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCCC-CCCCCCEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899188359820788189999987864-4778968999998701-2868999999--------99999997699988412
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 069996997999972799-8989898629--------9999999999999999999999999399130477999537557
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFS--------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~--------~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~ 253 (1620)
++++...+.+++||||++ |+|.+++... ....++...+..++.|+++||.|||+++|+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~ 168 (308)
T d1p4oa_ 89 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 168 (308)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred EEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECC
T ss_conf 54784288106777604899889998750332113444688799999999999999999876479654328677540359
Q ss_pred CCCEEEEEEECCCCCCC
Q ss_conf 99337999504786557
Q 000355 254 SCWSWLYICDKPLVGFN 270 (1620)
Q Consensus 254 ~~~~~iKI~DFGlar~~ 270 (1620)
++ .+||+|||+|+..
T Consensus 169 ~~--~~Kl~DFGla~~~ 183 (308)
T d1p4oa_ 169 DF--TVKIGDFGMTRDI 183 (308)
T ss_dssp TC--CEEECCTTCCCGG
T ss_pred CC--EEEEEECCCCEEC
T ss_conf 96--4999424542023
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-31 Score=227.74 Aligned_cols=282 Identities=21% Similarity=0.345 Sum_probs=218.0
Q ss_pred EECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE--E
Q ss_conf 7479-730378503567689999914999899951588987579999589984999971477655699993089908--9
Q 000355 1255 WKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--A 1331 (1620)
Q Consensus 1255 Wd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L--a 1331 (1620)
|+.. ....++|+||.++|.+ +++++|++|+|||. |++|++||+.++++++++.+|.+.|.+++|+++ .+ +
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~----Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~ 73 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSD----DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISG 73 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEET----TSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEE
T ss_pred CCCCCCCCCEEECCCCCCEEE-EEEECCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCC
T ss_conf 989988758898886875099-99978999999918----990999989999799999488999899994798--63210
Q ss_pred EECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf 92792999969999257997036876434468998842122465321124677888489743498217987724998999
Q 000355 1332 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1411 (1620)
Q Consensus 1332 S~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lv 1411 (1620)
+.|+++++|+.............. ..+... ........
T Consensus 74 s~D~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~------------~~~~~~~~ 111 (342)
T d2ovrb2 74 STDRTLKVWNAETGECIHTLYGHT------------------------------STVRCM------------HLHEKRVV 111 (342)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS------------------------------SCEEEE------------EEETTEEE
T ss_pred EECCCCCCCCCCCCCCEECCCCCC------------------------------EEEEEE------------ECCCCCCC
T ss_conf 000011111111000000012333------------------------------047652------------02465221
Q ss_pred EEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE
Q ss_conf 99779909999878992468860899654568751057650897633576567998899990599099997899948999
Q 000355 1412 VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1491 (1620)
Q Consensus 1412 sgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~ 1491 (1620)
.+..|+++.+|+..+++....+...... . .... .....+++++.|+.+++||.+.++.+..
T Consensus 112 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~-----------~~~~~~~~~~~d~~i~~~d~~~~~~~~~ 172 (342)
T d2ovrb2 112 SGSRDATLRVWDIETGQCLHVLMGHVAA-------V-RCVQ-----------YDGRRVVSGAYDFMVKVWDPETETCLHT 172 (342)
T ss_dssp EEETTSEEEEEESSSCCEEEEEECCSSC-------E-EEEE-----------ECSSCEEEEETTSCEEEEEGGGTEEEEE
T ss_pred CCCCCEEEEEEECCCCCCEEEEECCCCC-------C-EEEC-----------CCCCEEEEECCCCEEEEEECCCCEEEEE
T ss_conf 2344403787403556300111001111-------0-0000-----------1333024335898699952523436678
Q ss_pred EECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 97137757899817999999995899499997899999988484069998799964199999994993-69982667889
Q 000355 1492 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSAD 1570 (1620)
Q Consensus 1492 l~~H~~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~ 1570 (1620)
+.+|...+..+ .+++.++++|+.||+|++||++.+ ..+..+.+|...+.+++++++++++++.|+ |++|++..
T Consensus 173 ~~~~~~~~~~~-~~~~~~l~s~~~dg~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~--- 246 (342)
T d2ovrb2 173 LQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETG--NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKT--- 246 (342)
T ss_dssp ECCCSSCEEEE-EECSSEEEEEETTSCEEEEETTTC--CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTT---
T ss_pred ECCCCCCCCCC-CCCCCEEEEEECCCEEEEEECCCC--EEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEECCC---
T ss_conf 72754442100-689999999958993999525565--365674166532057706899999974898899986554---
Q ss_pred CCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 89950000110012117987546489999924998999991899499919
Q 000355 1571 EDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1571 ~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
... .........|...+.+++++ +.++++|++||.|++||
T Consensus 247 --~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd 286 (342)
T d2ovrb2 247 --GQC------LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 286 (342)
T ss_dssp --CCE------EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred --CCC------CCCCCCCCEEEECEEECCCC--CCEEEEECCCCEEEEEE
T ss_conf --422------11122100011010000137--98449990899899999
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-37 Score=266.81 Aligned_cols=145 Identities=20% Similarity=0.196 Sum_probs=125.8
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.. .+..||||+++... ..+.+. +|+++++.++||||+++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~--------~~~~vAvK~i~~~~----~~~~~~--------~E~~~l~~l~HpnIv~~ 65 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 65 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--------TTEEEEEEECCCCC------HHHH--------HTHHHHTTCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCEEEEEEEE--------CCEEEEEEEECCHH----HHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89948857982079808999999--------99099999988577----799999--------99999986789898549
Q ss_pred EEEEEE-CCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 069996-997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 183 LGLLKT-SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~-~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++.. .+.+|+||||++ |+|.+++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 66 ~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~--~~k 143 (262)
T d1byga_ 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAK 143 (262)
T ss_dssp EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEE
T ss_pred EEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCC--CEE
T ss_conf 878872389289999636999899998745788889999999999998523211337655366656760146899--776
Q ss_pred EEECCCCCC
Q ss_conf 950478655
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 I~DFGlar~ 269 (1620)
|+|||+++.
T Consensus 144 l~dfg~s~~ 152 (262)
T d1byga_ 144 VSDFGLTKE 152 (262)
T ss_dssp ECCCCC---
T ss_pred ECCCCCCEE
T ss_conf 324560034
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-31 Score=228.82 Aligned_cols=272 Identities=15% Similarity=0.123 Sum_probs=196.2
Q ss_pred CCCCCCCCCCCCEEEEECCCCC-EEEEECC---CCEEEEEECCC-CCEEEEEECC--CCCEEEEECCCCCCCCEEEEEEC
Q ss_conf 3389998889983899708997-7787479---73037850356-7689999914--99989995158898757999958
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKD-ESPWKIK---ASILSSIRAHH-GALRSVAVGQ--DECTVFTAGIGPGFKGTVQKWEL 1302 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~-i~iWd~~---~~~l~tl~gH~-~~V~svafsp--dg~~LaSgs~d~~~DgtVrIWdl 1302 (1620)
+|+|++.. ++.++++.. ++.|+.. ...+..+.||. ..|++++|+| +++++++|+. ||+|++||+
T Consensus 24 ~~~~~~~~-----la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~----Dg~i~iWd~ 94 (325)
T d1pgua1 24 SYDPTTNA-----IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE----SGKVIVWGW 94 (325)
T ss_dssp EEETTTTE-----EEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET----TSEEEEEEE
T ss_pred EECCCCCE-----EEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEC----CCCEEEEEE
T ss_conf 99899799-----999969987999976888876502899078999889999811799979999948----997798540
Q ss_pred CCCE--------EEEEEECCCCCEEEEEEEECCCEEE--EE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 9984--------9999714776556999930899089--92--7929999699992579970368764344689988421
Q 000355 1303 TRIN--------CVSGYYGHEEVVNDICVLSSSGRIA--SC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1303 ~tg~--------~i~~l~gH~~~V~sIafs~~~~~La--S~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
..++ ....+..|.+.|.+++|++++..++ +. |+.+++|+..+++++..+..|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------------- 159 (325)
T d1pgua1 95 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS--------------- 159 (325)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS---------------
T ss_pred CCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECC---------------
T ss_conf 58862156510025411365673779998999882201001244047888502331100120012---------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 22465321124677888489743498217987724998-99999779909999878992468860899654568751057
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~-~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sv 1449 (1620)
.. ++++++++++. .+++++.|+.+++||..+++....+..+. .+...|.++
T Consensus 160 ---------------~~----------v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~~v~~v 211 (325)
T d1pgua1 160 ---------------QR----------INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH---KQGSFVRDV 211 (325)
T ss_dssp ---------------SC----------EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS---CTTCCEEEE
T ss_pred ---------------CC----------CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCC---CCCCCCEEE
T ss_conf ---------------34----------32111123432068886211122111122110000000015---777752776
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEE----EEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 650897633576567998899990599099997899948999971377578----9981799999999589949999789
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT----KLAAPEDHLLVSSSLDKTLRIWDLR 1525 (1620)
Q Consensus 1450 a~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~----sVaspdg~~LvSgS~DgtI~iWDl~ 1525 (1620)
+|++. .+.++++|+.||.|++||+++++.+..+.+|...+. ++..++|++|++++.|++|++||++
T Consensus 212 ~~~pd----------~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~ 281 (325)
T d1pgua1 212 EFSPD----------SGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281 (325)
T ss_dssp EECST----------TCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred EECCC----------CCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 30345----------31000011233210134300122211111111111110000003689999999589939999999
Q ss_pred CCCCCCCEEEECCCCCEE----EEEEC-CCEEEEEECCC-EEEEEC
Q ss_conf 999998848406999879----99641-99999994993-699826
Q 000355 1526 RNWPSQPTVFKGHTNGIS----GFSVW-GQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1526 ~~~~~~~~~l~gH~~~V~----afSpd-g~~LaSgS~Dg-I~vwdl 1565 (1620)
++ +.+..+..|...+. ++.+. +..+++++.|+ |++||+
T Consensus 282 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 282 TS--KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp TT--EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CC--CEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
T ss_conf 99--788999954874067699999889999999979999999979
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-31 Score=227.08 Aligned_cols=274 Identities=14% Similarity=0.212 Sum_probs=215.4
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEE
Q ss_conf 2345699925633899988899838997089977787479-730378503567689999914999899951588987579
Q 000355 1219 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1297 (1620)
Q Consensus 1219 ~~~~~H~~~v~~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtV 1297 (1620)
....+|...|+++++|+++ |++||.|+++++||+. +++++++++|.++|++++| ++++++||+. |++|
T Consensus 9 ~~~~~~~~~V~c~~~d~~~-----l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~----D~~i 77 (293)
T d1p22a2 9 HCRSETSKGVYCLQYDDQK-----IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS----DSTV 77 (293)
T ss_dssp ECCCSSCCCEEEEECCSSE-----EEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET----TSCE
T ss_pred ECCCCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCC----CCCC
T ss_conf 4328999988999876999-----999928993999999999199999267787763423--6300210011----1011
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEEEECCCEE--EEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999589984999971477655699993089908--992792999969999257997036876434468998842122465
Q 000355 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1298 rIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L--aS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
++|++.++........+.....+. ......+ ++.++.+.+||..+..........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 134 (293)
T d1p22a2 78 RVWDVNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL--------------------- 134 (293)
T ss_dssp EEEESSSCCEEEEECCCCSCEEEE--ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEE---------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCEEECCCCCCEEEEECCCCCCCCCCCCC---------------------
T ss_conf 000002464100111111000011--111100000135663068613445444212100---------------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
Q ss_conf 32112467788848974349821798772499899999779909999878992468860899654568751057650897
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~ 1455 (1620)
..+...+....+ ....+++++.|+.+++||.++++.+..+.++... +..+.+
T Consensus 135 ------~~~~~~v~~~~~------------~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~------v~~~~~---- 186 (293)
T d1p22a2 135 ------VGHRAAVNVVDF------------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG------IACLQY---- 186 (293)
T ss_dssp ------CCCSSCEEEEEE------------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC------EEEEEE----
T ss_pred ------CCCCCCCCCCEE------------CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCC------CCCCCC----
T ss_conf ------011354311000------------0022011069986041007888388997155445------322168----
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCC-------
Q ss_conf 6335765679988999905990999978999489999713775789981799999999589949999789999-------
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW------- 1528 (1620)
Q Consensus 1456 ~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~------- 1528 (1620)
++..+++|+.||.|++||++++..+..+.+|...+..+ ++++.+|++|+.||.|++||+....
T Consensus 187 ---------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 256 (293)
T d1p22a2 187 ---------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAG 256 (293)
T ss_dssp ---------ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred ---------CCCEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEC-CCCCEEEEEECCCCEEEEEECCCCCCCCCCCC
T ss_conf ---------98758876589989998665561466521431000001-45410799986799799998888864445677
Q ss_pred CCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEE
Q ss_conf 9988484069998799964199999994993-69982
Q 000355 1529 PSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1529 ~~~~~~l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwd 1564 (1620)
......+.+|.+.|.+++++++.|+||+.|+ |++||
T Consensus 257 ~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 257 TLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred CEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEC
T ss_conf 5455784588998899997199999992299899959
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.4e-33 Score=237.66 Aligned_cols=328 Identities=16% Similarity=0.183 Sum_probs=220.7
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECC-CC------EEEEEECCCCCEEEEEECC-------CCCE
Q ss_conf 02345699925633899988899838997089977787479-73------0378503567689999914-------9998
Q 000355 1218 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-AS------ILSSIRAHHGALRSVAVGQ-------DECT 1283 (1620)
Q Consensus 1218 ~~~~~~H~~~v~~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~------~l~tl~gH~~~V~svafsp-------dg~~ 1283 (1620)
.....+|.+.|++.+..+.+ ++++|.|+++++||.. .. .......|...+..+.... ++..
T Consensus 7 ~~~~~~H~~~I~~v~~~~~~-----l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACNSF-----TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81 (393)
T ss_dssp EEESSCSSSCEEEEEECSSE-----EEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred EECCCCCCCCCEEEEEECCE-----EEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCE
T ss_conf 52087636712799996999-----9999799969987898788776540467654204771676667500157998768
Q ss_pred EEEECCCCCCCCEEEEEECCCCEE----E-EEE-----ECCCCCEEEEEEEECC-----CEE--EEECCCEEEEECCCCC
Q ss_conf 999515889875799995899849----9-997-----1477655699993089-----908--9927929999699992
Q 000355 1284 VFTAGIGPGFKGTVQKWELTRINC----V-SGY-----YGHEEVVNDICVLSSS-----GRI--ASCDGTLHVWNSQTGK 1346 (1620)
Q Consensus 1284 LaSgs~d~~~DgtVrIWdl~tg~~----i-~~l-----~gH~~~V~sIafs~~~-----~~L--aS~DgtI~IWD~~tg~ 1346 (1620)
+++++. |++|++|+...... . ... ..+...+..++|.+.. .++ ++.||++++|++....
T Consensus 82 ~~s~~~----dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~ 157 (393)
T d1sq9a_ 82 VATTSF----SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 157 (393)
T ss_dssp EEEEET----TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEEC----CCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 999948----9919999822898205651245632431157896689998447886542179998389819998740477
Q ss_pred EE-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 57-99703687643446899884212246532112467788848974349821798772499899999779909999878
Q 000355 1347 LL-SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425 (1620)
Q Consensus 1347 ~i-~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~ 1425 (1620)
.. ..+..+... ... ..............+.++++++++ .+++|+.|++|++||+.
T Consensus 158 ~~~~~~~~~~~~----------~~~-------------~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~ 213 (393)
T d1sq9a_ 158 DESNSLTLNWSP----------TLE-------------LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 213 (393)
T ss_dssp SHHHHTTTCCCC----------EEE-------------EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred CCCCEEEEEECC----------CEE-------------CCCCEECCCCCCCCEEEEEECCCC-EEEEEECCCCEEEEEEC
T ss_conf 534102331032----------000-------------145100025789867899978999-89999389829998602
Q ss_pred CCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCC---EEEEECCCCCEEEEEE---------
Q ss_conf 9924688608996545687510576508976335765679988999905990---9999789994899997---------
Q 000355 1426 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ---CRLFDVRSGNVIASWR--------- 1493 (1620)
Q Consensus 1426 tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~---I~iwD~~tg~~i~~l~--------- 1493 (1620)
+++++..+.......+|...|++++|+ |++++|++|+.|++ |++||+.+++.+..+.
T Consensus 214 ~~~~~~~~~~~~~l~~h~~~V~~l~~s-----------pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~ 282 (393)
T d1sq9a_ 214 TLRPLYNFESQHSMINNSNSIRSVKFS-----------PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282 (393)
T ss_dssp TTEEEEEEECCC---CCCCCEEEEEEC-----------SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCC-----------CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCE
T ss_conf 332110000111112425638770046-----------653201124289884210010353213444311566664310
Q ss_pred ----CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE------EEEECCCEEEEEECCCEEE
Q ss_conf ----1377578998-1799999999589949999789999998848406999879------9964199999994993699
Q 000355 1494 ----AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS------GFSVWGQDVISISNNKIGL 1562 (1620)
Q Consensus 1494 ----~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~------afSpdg~~LaSgS~DgI~v 1562 (1620)
+|.+.|++++ +|++++|+|||.|++|++||+.++ ..+.+++||.+.|. +|++++..+++++...++.
T Consensus 283 ~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g--~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (393)
T d1sq9a_ 283 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK--ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF 360 (393)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE
T ss_pred EEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCC--CEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEE
T ss_conf 232023586660013898880698779998999999999--799999886876137734899999999999831246998
Q ss_pred EECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
Q ss_conf 826678898995000011001211798754648999992499899999189949991
Q 000355 1563 SSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1563 wdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIw 1619 (1620)
|.-. ... ... ......|++++.|+.||+|
T Consensus 361 ~~~~-----~~~----------------~~~-------~~~~~~~~~~~~d~~ir~~ 389 (393)
T d1sq9a_ 361 LKKG-----WRS----------------GMG-------ADLNESLCCVCLDRSIRWF 389 (393)
T ss_dssp ECTT-----TSB----------------STT-------CTTSCEEEEEETTTEEEEE
T ss_pred CCCC-----CEE----------------CCC-------CCCCCEEEEEECCCEEEEE
T ss_conf 8667-----663----------------123-------6889979999919908999
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.7e-29 Score=214.49 Aligned_cols=284 Identities=13% Similarity=0.090 Sum_probs=182.1
Q ss_pred CEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCC--EEEEEEECCC-CCEEEEEEEEC--CCEEEEE--CCCEEEEECC
Q ss_conf 68999991499989995158898757999958998--4999971477-65569999308--9908992--7929999699
Q 000355 1271 ALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYGHE-EVVNDICVLSS--SGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1271 ~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg--~~i~~l~gH~-~~V~sIafs~~--~~~LaS~--DgtI~IWD~~ 1343 (1620)
.+.+++|+|++..++.++.+ ...|+.|+.... .....+.||. ..|++++|+|. +.+++|+ ||+|++||..
T Consensus 19 ~~t~l~~~~~~~~la~~~~~---~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~ 95 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGK---SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95 (325)
T ss_dssp CCCCCEEETTTTEEEEEETT---EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEECC---CEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEC
T ss_conf 84799998997999999699---879999768888765028990789998899998117999799999489977985405
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC--CCCEEE
Q ss_conf 992579970368764344689988421224653211246778884897434982179877249989999977--990999
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG--NGSLRF 1421 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~--DgtIri 1421 (1620)
.++....+..+... ........+.+++|++++..+++++. ++.+++
T Consensus 96 ~~~~~~~~~~~~~~--------------------------------~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~ 143 (325)
T d1pgua1 96 FDKESNSVEVNVKS--------------------------------EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143 (325)
T ss_dssp EEGGGTEEEEEEEE--------------------------------EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred CCCCEEEEECCCCC--------------------------------CCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEE
T ss_conf 88621565100254--------------------------------1136567377999899988220100124404788
Q ss_pred EECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE---CCCCC
Q ss_conf 987899246886089965456875105765089763357656799889999059909999789994899997---13775
Q 000355 1422 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR---AHDGY 1498 (1620)
Q Consensus 1422 WDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~---~H~~~ 1498 (1620)
|+..+++++..+.+| ...+.+++|.+... ..+++++.|+.+++||..+++...... +|...
T Consensus 144 ~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~----------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 207 (325)
T d1pgua1 144 ISWDSGNSLGEVSGH------SQRINACHLKQSRP----------MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 207 (325)
T ss_dssp EETTTCCEEEECCSC------SSCEEEEEECSSSS----------CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEECCCCCCEEEEEC------CCCCCCCCCCCCCC----------CEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 850233110012001------23432111123432----------06888621112211112211000000001577775
Q ss_pred EEEEE-ECC-CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEE---ECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 78998-179-9999999589949999789999998848406999879--996---4199999994993-69982667889
Q 000355 1499 VTKLA-APE-DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS---VWGQDVISISNNK-IGLSSLSKSAD 1570 (1620)
Q Consensus 1499 V~sVa-spd-g~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~--afS---pdg~~LaSgS~Dg-I~vwdl~~~~~ 1570 (1620)
|++++ +|+ +.++++++.|+.|++||++++ ....++.+|...+. .|+ +++++|++++.|+ |++||+.
T Consensus 208 v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~--~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~---- 281 (325)
T d1pgua1 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSG--EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT---- 281 (325)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTC--CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT----
T ss_pred CEEEEECCCCCEECCCCCCCCCEEEEEECCC--CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECC----
T ss_conf 2776303453100001123321013430012--2211111111111110000003689999999589939999999----
Q ss_pred CCCCCEEECCCEEEECCCCCCC--CCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 8995000011001211798754--6489999924998999991899499919
Q 000355 1571 EDGQHRLVPQKLYMVDNGAKNL--SVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1571 ~~g~~~~~~~kl~~~~~g~~h~--~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
+++.. +.+.. +++. ....++.+.++ ..+++||.||.|++||
T Consensus 282 -~~~~~----~~~~~---~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 282 -TSKCV----QKWTL---DKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYE 324 (325)
T ss_dssp -TTEEE----EEEEC---CTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEE
T ss_pred -CCCEE----EEEEE---CCCCCCCEEEEEEECCC-CEEEEEECCCEEEEEE
T ss_conf -99788----99995---48740676999998899-9999997999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.5e-30 Score=219.24 Aligned_cols=115 Identities=13% Similarity=0.085 Sum_probs=48.5
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CC---EEEEEECCCCCEEEEEECCCC-CEEEEECCCCCC
Q ss_conf 4569992563--3899988899838997089977787479-73---037850356768999991499-989995158898
Q 000355 1221 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS---ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGF 1293 (1620)
Q Consensus 1221 ~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~---~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~ 1293 (1620)
..+|++.|++ |||++.+ |++||.|+++++||+. +. .+....+|.++|.+++|++++ ..+++|+.
T Consensus 7 ~~~h~d~I~~l~fsp~~~~-----L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~---- 77 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIPSKSL-----LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---- 77 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTE-----EEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET----
T ss_pred CCCCCCCEEEEEEECCCCE-----EEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCC----
T ss_conf 8899897888999589999-----9999799929999756998636898855899988999995899978998126----
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCEE-EEEEEECCCEE--EEECCCEEEEECCC
Q ss_conf 75799995899849999714776556-99993089908--99279299996999
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVN-DICVLSSSGRI--ASCDGTLHVWNSQT 1344 (1620)
Q Consensus 1294 DgtVrIWdl~tg~~i~~l~gH~~~V~-sIafs~~~~~L--aS~DgtI~IWD~~t 1344 (1620)
|++|++|+...+........+...+. ...+.++...+ ++.|+++++||+++
T Consensus 78 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~ 131 (342)
T d1yfqa_ 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHH
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 531145420443200000111111111111111111111101222111020234
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.4e-30 Score=219.27 Aligned_cols=265 Identities=14% Similarity=0.176 Sum_probs=195.9
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE-EEECCCEE
Q ss_conf 30378503567689999914999899951588987579999589984999971477655699993089908-99279299
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1338 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L-aS~DgtI~ 1338 (1620)
+.+++|+||.++|++++|++ |+||+. ||+|++||+.++ ..+|...|.++++.++...+ ++.|++++
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~----Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~~~~s~s~D~~v~ 70 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSY----DGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYSSISWDDTLK 70 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEET----TSCEEETTTTEE-----ECCCCSCEEEEECCSTTCCEEEETTTEEE
T ss_pred CEEEEECCCCCCEEEEEECC----EEEEEC----CCEEEEEECCCC-----CCCCCCCEEEEEECCCCEEEEEEECCCCC
T ss_conf 03499988798649999895----789848----991999989998-----88877878999965997289886101222
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 99699992579970368764344689988421224653211246778884897434982179877249989999977990
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~Dgt 1418 (1620)
+|+..+.+. . ....++.+.+++..++ .+.++.
T Consensus 71 ~w~~~~~~~----~-------------------------------------------~~~~~~~~~~~~~~~~-~~~~~~ 102 (287)
T d1pgua2 71 VNGITKHEF----G-------------------------------------------SQPKVASANNDGFTAV-LTNDDD 102 (287)
T ss_dssp ETTEEEEEC----S-------------------------------------------SCEEEEEECSSSEEEE-EETTSE
T ss_pred CCCCCCCCC----C-------------------------------------------CCEEEEEECCCCCEEE-EEECCC
T ss_conf 111111111----2-------------------------------------------2101466416785699-960332
Q ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCC-CEEEEECCCCCEEEEEE-CCC
Q ss_conf 9999878992468860899654568751057650897633576567998899990599-09999789994899997-137
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG-QCRLFDVRSGNVIASWR-AHD 1496 (1620)
Q Consensus 1419 IriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg-~I~iwD~~tg~~i~~l~-~H~ 1496 (1620)
+.+|+..+++.+..+..... +.+ ++ ++++.+++++.++ .+++|+....+....+. .|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~-------~~~--~~-----------~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~ 162 (287)
T d1pgua2 103 LLILQSFTGDIIKSVRLNSP-------GSA--VS-----------LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR 162 (287)
T ss_dssp EEEEETTTCCEEEEEECSSC-------EEE--EE-----------ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCS
T ss_pred CEEEECCCEEEEEECCCCCE-------EEE--EE-----------CCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCC
T ss_conf 10000110035431012220-------356--52-----------14751110002210002100012210001210247
Q ss_pred CCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEE----------CCCEEEEEECCC-EEE
Q ss_conf 7578998-17999999995899499997899999988484069998799--964----------199999994993-699
Q 000355 1497 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV----------WGQDVISISNNK-IGL 1562 (1620)
Q Consensus 1497 ~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--fSp----------dg~~LaSgS~Dg-I~v 1562 (1620)
..+++++ +|++.+|++|+.||.|++||+.++.. ....+.+|...|.+ |+| ++.++++|+.|+ |++
T Consensus 163 ~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~i 241 (287)
T d1pgua2 163 AKPSYISISPSETYIAAGDVMGKILLYDLQSREV-KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241 (287)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 8536999516765211011111100000023321-100011111111000001365410012678870276649995999
Q ss_pred EECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 8266788989950000110012117987546489999924998999991899499919
Q 000355 1563 SSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1563 wdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
|++.... +...... +|.+.|++++|+|++ .|+++|.||.|++|+
T Consensus 242 w~~~~~~-----------~~~~~~~--~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 242 YSVKRPM-----------KIIKALN--AHKDGVNNLLWETPS-TLVSSGADACIKRWN 285 (287)
T ss_dssp EESSCTT-----------CCEEETT--SSTTCEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred EECCCCC-----------EEEEEEC--CCCCCEEEEEECCCC-EEEEEECCCEEEEEE
T ss_conf 8889997-----------5899927--878985899998999-899997999299999
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=7.1e-29 Score=210.20 Aligned_cols=291 Identities=11% Similarity=0.160 Sum_probs=186.7
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCE------EEEEEECCCCCEEEEEEE---ECC----C
Q ss_conf 378503567689999914999899951588987579999589984------999971477655699993---089----9
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN------CVSGYYGHEEVVNDICVL---SSS----G 1328 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~------~i~~l~gH~~~V~sIafs---~~~----~ 1328 (1620)
....+||.+.|+++++++ ++++|||. |++|++||..+.+ .......|...+..+... +.. .
T Consensus 7 ~~~~~~H~~~I~~v~~~~--~~l~S~S~----D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACN--SFTVSCSG----DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEET----TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred EECCCCCCCCCEEEEEEC--CEEEEEEC----CCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 520876367127999969--99999979----996998789878877654046765420477167666750015799876
Q ss_pred EEEEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC
Q ss_conf 08992--7929999699992579970368764344689988421224653211246778884897434982179877249
Q 000355 1329 RIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC 1406 (1620)
Q Consensus 1329 ~LaS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~d 1406 (1620)
.++++ ||+|++|+...+.....+..+... ..........++.+.+.... ....
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~-----~~~~ 135 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLD--------------------LLDSDMKKHSFWALKWGASN-----DRLL 135 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEEC--------------------CSCTTGGGSCEEEEEEECCC---------
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCC--------------------EEEECCCCCCEEEEEEECCC-----CCCC
T ss_conf 8999948991999982289820565124563--------------------24311578966899984478-----8654
Q ss_pred CCEEEEEECCCCEEEEECCCCCE------------EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 98999997799099998789924------------688608996545687510576508976335765679988999905
Q 000355 1407 VERLVVGIGNGSLRFIDINQGQK------------LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1474 (1620)
Q Consensus 1407 g~~lvsgs~DgtIriWDl~tg~~------------i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~ 1474 (1620)
+..+++++.|+++++||+..... ................+.+++++ +++ ++|+|+.
T Consensus 136 ~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s-----------~dg-~lasgs~ 203 (393)
T d1sq9a_ 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-----------ERG-LIATGFN 203 (393)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-----------TTS-EEEEECT
T ss_pred CCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCEECCCCEECCCCCCCCEEEEEEC-----------CCC-EEEEEEC
T ss_conf 2179998389819998740477534102331032000145100025789867899978-----------999-8999938
Q ss_pred CCCEEEEECCCCCEEEEEE------CCCCCEEEEE-ECCCCEEEEEECCCC---EEEEECCCCCCCCCEEE---------
Q ss_conf 9909999789994899997------1377578998-179999999958994---99997899999988484---------
Q 000355 1475 SGQCRLFDVRSGNVIASWR------AHDGYVTKLA-APEDHLLVSSSLDKT---LRIWDLRRNWPSQPTVF--------- 1535 (1620)
Q Consensus 1475 Dg~I~iwD~~tg~~i~~l~------~H~~~V~sVa-spdg~~LvSgS~Dgt---I~iWDl~~~~~~~~~~l--------- 1535 (1620)
||+|++||+.+++++..+. +|..+|++++ +|+|++|++|+.|++ |++||++++ .....+
T Consensus 204 Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g--~~~~~l~~~~~~~~~ 281 (393)
T d1sq9a_ 204 NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQA 281 (393)
T ss_dssp TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC------
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEECCCCCC--EEEEEECCCCCCCCC
T ss_conf 982999860233211000011111242563877004665320112428988421001035321--344431156666431
Q ss_pred ----ECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEE----EEEEECCC
Q ss_conf ----069998799--964199999994993-6998266788989950000110012117987546489----99992499
Q 000355 1536 ----KGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS----SISILPFS 1604 (1620)
Q Consensus 1536 ----~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~----svafsPdg 1604 (1620)
.||...|++ |+|++++|+||+.|+ |++||+. .|+..... . +|...|. .++|+|++
T Consensus 282 ~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~-----~g~~~~~l-------~--gH~~~v~~~~~~~~~~~~~ 347 (393)
T d1sq9a_ 282 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK-----TKERITTL-------N--MHCDDIEIEEDILAVDEHG 347 (393)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TTEEEEEE-------E--CCGGGCSSGGGCCCBCTTS
T ss_pred EEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECC-----CCCEEEEE-------C--CCCCCCCCCCCEEEECCCC
T ss_conf 02320235866600138988806987799989999999-----99799999-------8--8687613773489999999
Q ss_pred CEEEEEE
Q ss_conf 8999991
Q 000355 1605 RLFLVGT 1611 (1620)
Q Consensus 1605 ~lLasgs 1611 (1620)
..+++++
T Consensus 348 ~~~~~~~ 354 (393)
T d1sq9a_ 348 DSLAEPG 354 (393)
T ss_dssp CBCSSCC
T ss_pred CEEEECC
T ss_conf 9999831
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5e-28 Score=204.36 Aligned_cols=265 Identities=15% Similarity=0.178 Sum_probs=203.7
Q ss_pred CCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCE
Q ss_conf 00234569992563389998889983899708997778747973037850356768999991499989995158898757
Q 000355 1217 ATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1217 ~~~~~~~H~~~v~~~S~dg~~~~~~~las~s~D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
...++.||.+.|.+..-+ . |++||.|+++++||... ..++|.+.|.++++++++ .+++++. |++
T Consensus 5 ~i~~l~gH~~~I~~l~~s--~-----l~sgs~Dg~v~~Wd~~~----~~~~h~~~V~~~~~~~~~-~~~s~s~----D~~ 68 (287)
T d1pgua2 5 VLKTISGHNKGITALTVN--P-----LISGSYDGRIMEWSSSS----MHQDHSNLIVSLDNSKAQ-EYSSISW----DDT 68 (287)
T ss_dssp EEEEECCCSSCEEEEETT--T-----TEEEETTSCEEETTTTE----EECCCCSCEEEEECCSTT-CCEEEET----TTE
T ss_pred EEEEECCCCCCEEEEEEC--C-----EEEEECCCEEEEEECCC----CCCCCCCCEEEEEECCCC-EEEEEEE----CCC
T ss_conf 349998879864999989--5-----78984899199998999----888877878999965997-2898861----012
Q ss_pred EEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEE-ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999958998499997147765569999308990899-2792999969999257997036876434468998842122465
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1297 VrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS-~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
+++|+..+.+ ....+..+++.+++..+++ .++.+.+|+..+++.+..+....
T Consensus 69 v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 121 (287)
T d1pgua2 69 LKVNGITKHE-------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS-------------------- 121 (287)
T ss_dssp EEETTEEEEE-------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSS--------------------
T ss_pred CCCCCCCCCC-------CCCCEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEECCCCC--------------------
T ss_conf 2211111111-------1221014664167856999603321000011003543101222--------------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC-CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECC
Q ss_conf 321124677888489743498217987724998999997799-0999987899246886089965456875105765089
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1454 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~Dg-tIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~ 1454 (1620)
.+.++.++++.+++++.|+ .+++|++...+....+... +...+.+++|+
T Consensus 122 -----------------------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s-- 171 (287)
T d1pgua2 122 -----------------------PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP-----LRAKPSYISIS-- 171 (287)
T ss_dssp -----------------------CEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC-----CSSCEEEEEEC--
T ss_pred -----------------------EEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEEC-----CCCCEEEEEEC--
T ss_conf -----------------------035652147511100022100021000122100012102-----47853699951--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE-EEECCCCCEEEEE-EC----------CCCEEEEEECCCCEEEE
Q ss_conf 763357656799889999059909999789994899-9971377578998-17----------99999999589949999
Q 000355 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA-SWRAHDGYVTKLA-AP----------EDHLLVSSSLDKTLRIW 1522 (1620)
Q Consensus 1455 ~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~-~l~~H~~~V~sVa-sp----------dg~~LvSgS~DgtI~iW 1522 (1620)
+++.++++|+.||.|++||+.+++... .+.+|...|++++ +| ++.+++||+.|++|++|
T Consensus 172 ---------~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw 242 (287)
T d1pgua2 172 ---------PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242 (287)
T ss_dssp ---------TTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred ---------CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEE
T ss_conf ---------67652110111111000000233211000111111110000013654100126788702766499959998
Q ss_pred ECCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEEC
Q ss_conf 7899999988484069998799--964199999994993-699826
Q 000355 1523 DLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1523 Dl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgS~Dg-I~vwdl 1565 (1620)
|++++. .....+.+|...|++ |++++ .+++++.|+ |++|++
T Consensus 243 ~~~~~~-~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 243 SVKRPM-KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp ESSCTT-CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred ECCCCC-EEEEEECCCCCCEEEEEECCCC-EEEEEECCCEEEEEEE
T ss_conf 889997-5899927878985899998999-8999979992999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.6e-29 Score=213.16 Aligned_cols=291 Identities=10% Similarity=0.046 Sum_probs=201.3
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEE---EEEEECCCCCEEEEEEEECCCE-EEE--E
Q ss_conf 303785035676899999149998999515889875799995899849---9997147765569999308990-899--2
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC---VSGYYGHEEVVNDICVLSSSGR-IAS--C 1333 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~---i~~l~gH~~~V~sIafs~~~~~-LaS--~ 1333 (1620)
++++..++|.+.|++++|+|++++|++||. |++|++||+.++.. .....+|.+.|.+++|++++.. +++ .
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~----Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~ 77 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSW----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEET----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET
T ss_pred CEEECCCCCCCCEEEEEEECCCCEEEEEEC----CCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCC
T ss_conf 759768899897888999589999999979----9929999756998636898855899988999995899978998126
Q ss_pred CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEE
Q ss_conf 79299996999925799703687643446899884212246532112467788848974349821798772499899999
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1334 DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsg 1413 (1620)
|++|++|+...+........+... ........++...++++
T Consensus 78 d~~v~~w~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~ 118 (342)
T d1yfqa_ 78 QGEILKVDLIGSPSFQALTNNEAN---------------------------------------LGICRICKYGDDKLIAA 118 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCC---------------------------------------SCEEEEEEETTTEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCCCCC---------------------------------------CCCCCCCCCCCCCCCCC
T ss_conf 531145420443200000111111---------------------------------------11111111111111110
Q ss_pred ECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE---
Q ss_conf 77990999987899246886089965456875105765089763357656799889999059909999789994899---
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA--- 1490 (1620)
Q Consensus 1414 s~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~--- 1490 (1620)
+.|+++++||++++......................++. +.++.+++++.|+.|++||+++++...
T Consensus 119 ~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 187 (342)
T d1yfqa_ 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD-----------TNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187 (342)
T ss_dssp ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE-----------ECSSEEEEEESTTEEEEEESSCCTTCCCEE
T ss_pred CCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEE-----------CCCCCEEEECCCCCEEEEECCCCCCCCEEE
T ss_conf 122211102023444330230002430012000001000-----------168702465179847887605676341112
Q ss_pred EEECCCCCEEEEE--ECCCCEEEEEECCCCEEEEECCCCCCCC-------------CEEEECCCCCEE--EEEECCCEEE
Q ss_conf 9971377578998--1799999999589949999789999998-------------848406999879--9964199999
Q 000355 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQ-------------PTVFKGHTNGIS--GFSVWGQDVI 1553 (1620)
Q Consensus 1491 ~l~~H~~~V~sVa--spdg~~LvSgS~DgtI~iWDl~~~~~~~-------------~~~l~gH~~~V~--afSpdg~~La 1553 (1620)
....+...+.+.. ..++..+++++.||.+.+|+........ .....+|...|+ +|+|++++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~la 267 (342)
T d1yfqa_ 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY 267 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE
T ss_pred EECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 10254221014676369998788654899599998059864011123512565553147776235431599669844799
Q ss_pred EEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
Q ss_conf 994993-699826678898995000011001211798754648999992499899999189949991
Q 000355 1554 SISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1554 SgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIw 1619 (1620)
+|+.|| |++||+. .+. ++.... +...+..++|+|+++++++|+.|+.+++|
T Consensus 268 sg~~Dg~v~vWD~~-----~~~------~l~~~~----~~~~~~~~~~s~~~~~l~~a~sdd~~~~~ 319 (342)
T d1yfqa_ 268 TAGSDGIISCWNLQ-----TRK------KIKNFA----KFNEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp EEETTSCEEEEETT-----TTE------EEEECC----CCSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred EECCCCEEEEEECC-----CCC------EEEEEC----CCCCCEEEEEEECCCEEEEEECCCCEEEE
T ss_conf 98799989999999-----894------988705----89998799999479999999919927883
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=3.2e-29 Score=212.56 Aligned_cols=305 Identities=10% Similarity=-0.043 Sum_probs=206.0
Q ss_pred ECCCC-CCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEE
Q ss_conf 63389-99888998389970899777874797303785035676899999149998999515889875799995899849
Q 000355 1229 WFPTP-AASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1307 (1620)
Q Consensus 1229 ~~~S~-dg~~~~~~~las~s~D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~ 1307 (1620)
-.||| ||++ +++++ ++.+.+|+.++..+..+ +|.+.|.+++|+|||+.|++++.+ .+..|++||+.+++.
T Consensus 8 ~~fSP~dG~~-----~a~~~-~g~v~v~d~~~~~~~~~-~~~~~v~~~~~spDg~~l~~~~~~--~g~~v~v~d~~~~~~ 78 (360)
T d1k32a3 8 EDFSPLDGDL-----IAFVS-RGQAFIQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTR--EGDFLGIYDYRTGKA 78 (360)
T ss_dssp EEEEECGGGC-----EEEEE-TTEEEEECTTSSBEEEC-SCCSCEEEEEECSSSEEEEEEEET--TEEEEEEEETTTCCE
T ss_pred CCCCCCCCCE-----EEEEE-CCEEEEEECCCCCEEEC-CCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEECCCCCE
T ss_conf 5146889999-----99998-99699998999948991-699988889998999999999928--998999998999948
Q ss_pred EEEEECCCCCEEEEEEEECCCEEEE--ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9997147765569999308990899--27929999699992579970368764344689988421224653211246778
Q 000355 1308 VSGYYGHEEVVNDICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1385 (1620)
Q Consensus 1308 i~~l~gH~~~V~sIafs~~~~~LaS--~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1385 (1620)
. .+.+|...|.+++|+|++.++++ .|+.+++|+..++++...+..+...
T Consensus 79 ~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 129 (360)
T d1k32a3 79 E-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM---------------------------- 129 (360)
T ss_dssp E-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC----------------------------
T ss_pred E-EEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCC----------------------------
T ss_conf 8-75089712774121145432100011111000001222100000013552----------------------------
Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEE----------CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
Q ss_conf 88489743498217987724998999997----------79909999878992468860899654568751057650897
Q 000355 1386 SGILSTAFDGNLYTCLHHIECVERLVVGI----------GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1386 ~~v~sv~f~~~~vt~i~~s~dg~~lvsgs----------~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~ 1455 (1620)
+.+++++++|+.++.+. .++.+++||+.+++....... ...+..++++
T Consensus 130 ------------~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~-------~~~~~~~~~s--- 187 (360)
T d1k32a3 130 ------------ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE-------NSHDYAPAFD--- 187 (360)
T ss_dssp ------------CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS-------SSBEEEEEEC---
T ss_pred ------------CCCHHHCCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECCC-------CCCCCCCCCC---
T ss_conf ------------023012132256652123312110002565426630455713530354-------3221100125---
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCE-------EEEEECCCCCEEEEE-ECCCCEEEEEECCCC---EEEEEC
Q ss_conf 633576567998899990599099997899948-------999971377578998-179999999958994---999978
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV-------IASWRAHDGYVTKLA-APEDHLLVSSSLDKT---LRIWDL 1524 (1620)
Q Consensus 1456 ~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~-------i~~l~~H~~~V~sVa-spdg~~LvSgS~Dgt---I~iWDl 1524 (1620)
++|+.|++++.++.+.+||...... ...+..+...+..+. ++++..++++..+.. .++|.+
T Consensus 188 --------pdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T d1k32a3 188 --------ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 259 (360)
T ss_dssp --------TTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEEC
T ss_pred --------CCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCEEEC
T ss_conf --------779999999599855753335440232036411798524696012068777671553113652665400101
Q ss_pred CCCCCCCCEEEECCCCCEEE-----EEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEE
Q ss_conf 99999988484069998799-----964199999994993-699826678898995000011001211798754648999
Q 000355 1525 RRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSI 1598 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~sv 1598 (1620)
.... .....+..+.+.+.. +++++.++++++.++ +++|++.. +. .. .+.+.|.++
T Consensus 260 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----~~-------~~------~~~~~v~~~ 320 (360)
T d1k32a3 260 NVDP-GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT-----RK-------VT------EVKNNLTDL 320 (360)
T ss_dssp SCCC-BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT-----CC-------EE------EEEEEEEEE
T ss_pred CCCC-CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCC-----CE-------EE------EECCCCCEE
T ss_conf 2476-75267541389856999973599706999648998799997999-----74-------98------864886879
Q ss_pred EEECCCCEEEEEECCCCEEECC
Q ss_conf 9924998999991899499919
Q 000355 1599 SILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1599 afsPdg~lLasgs~DG~IrIwd 1620 (1620)
+|+|||+.|++++.||.|++|+
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d 342 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFP 342 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEEECCCEEEEEE
T ss_conf 9999898999997899499999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=3.2e-26 Score=191.91 Aligned_cols=305 Identities=10% Similarity=0.064 Sum_probs=191.9
Q ss_pred EEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEE-----ECCCC
Q ss_conf 8997089977787479-73037850356768999991499989995158898757999958998499997-----14776
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY-----YGHEE 1316 (1620)
Q Consensus 1243 las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l-----~gH~~ 1316 (1620)
+++++.|+++++||.. ++++.++.+|. .+..++|||||+++++++. |++|++||+.++++.... .+|.+
T Consensus 35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~----d~~v~vwd~~t~~~~~~~~i~~~~~~~~ 109 (426)
T d1hzua2 35 SVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGR----DARIDMIDLWAKEPTKVAEIKIGIEARS 109 (426)
T ss_dssp EEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEEEC----CCCEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 9997599979999999995999996899-8038999899999999958----9988999756886048999867888764
Q ss_pred CEEEEEEEECCCEE-EE--ECCCEEEEECCCCCEEEEEECCCCCCCCC------------CCCCCCCCCCCCCCC-CCCC
Q ss_conf 55699993089908-99--27929999699992579970368764344------------689988421224653-2112
Q 000355 1317 VVNDICVLSSSGRI-AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHG------------GSPSSSISKINTDQV-GMLN 1380 (1620)
Q Consensus 1317 ~V~sIafs~~~~~L-aS--~DgtI~IWD~~tg~~i~~l~~~~~~~~~~------------~s~s~~~~~~~~~~~-~~~~ 1380 (1620)
.+.+++|+|++.++ ++ .|+++++||..++.++.....+....... .++.+.......... ....
T Consensus 110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~ 189 (426)
T d1hzua2 110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 189 (426)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 58850026889879996358976999857764125786226777364364278850389987878788885278976999
Q ss_pred CCCCCCC--EEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 4677888--4897434982179877249989999977-990999987899246886089965456875105765089763
Q 000355 1381 SNTLSSG--ILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1381 ~~~~s~~--v~sv~f~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~ 1457 (1620)
....... .....-.+.....+.+++++++++++.. +..+.++|..+++.+..+...... .......+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~- 264 (426)
T d1hzua2 190 VNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP----HPGRGANFVHPKY- 264 (426)
T ss_dssp EECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCC----CCSCCEEEEETTT-
T ss_pred EEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCC----CCCCEEEEECCCC-
T ss_conf 99246652045775667753761377888678864201100000002556278875058744----4342011006987-
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEECCC-------CCEEEEEECCCCCEEEEE-ECCCCEEE-------EEECCCCEEEE
Q ss_conf 3576567998899990599099997899-------948999971377578998-17999999-------99589949999
Q 000355 1458 QAGGAVASPSWIAAGLSSGQCRLFDVRS-------GNVIASWRAHDGYVTKLA-APEDHLLV-------SSSLDKTLRIW 1522 (1620)
Q Consensus 1458 s~~g~~~~g~~LasGs~Dg~I~iwD~~t-------g~~i~~l~~H~~~V~sVa-spdg~~Lv-------SgS~DgtI~iW 1522 (1620)
+ .-..++.+.|+.+.+|+... ++....+.+|...++.++ +|++++++ +++.|++|++|
T Consensus 265 ---~----~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vw 337 (426)
T d1hzua2 265 ---G----PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 337 (426)
T ss_dssp ---E----EEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEE
T ss_pred ---C----CEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEE
T ss_conf ---7----457741578965988522566520330258689866887636787489986188850679880228879999
Q ss_pred ECCCCCCCCCEEE---------ECCCCCEE--EEEECCCEE-EEE----ECCC-EEEEECC
Q ss_conf 7899999988484---------06999879--996419999-999----4993-6998266
Q 000355 1523 DLRRNWPSQPTVF---------KGHTNGIS--GFSVWGQDV-ISI----SNNK-IGLSSLS 1566 (1620)
Q Consensus 1523 Dl~~~~~~~~~~l---------~gH~~~V~--afSpdg~~L-aSg----S~Dg-I~vwdl~ 1566 (1620)
|+.++. ...++ ..|...|. +|||||+.+ +++ +.++ |.+||..
T Consensus 338 d~~t~~--~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~ 396 (426)
T d1hzua2 338 DLKNLD--AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 396 (426)
T ss_dssp ETTCTT--SCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETT
T ss_pred ECCCCC--CCEEEECCCHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECC
T ss_conf 898787--67089502110256778851898799999999999972488889829999999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.95 E-value=2.4e-25 Score=185.80 Aligned_cols=332 Identities=8% Similarity=-0.053 Sum_probs=199.5
Q ss_pred EEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEE--EEE---EECCCC
Q ss_conf 8997089977787479-7303785035676899999149998999515889875799995899849--999---714776
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC--VSG---YYGHEE 1316 (1620)
Q Consensus 1243 las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~--i~~---l~gH~~ 1316 (1620)
+++.+.|+++.+||.+ ++++.++..| ..+..++|||||+++++++. |++|++||+.+++. ... ..+|.+
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~----dg~v~~~d~~t~~~~~~~~i~~~~~~~~ 109 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEPTTVAEIKIGSEARS 109 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCCEEEEECC----CCCEEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 999769997999989998399997379-97137998899999999828----9997899810898128899844889877
Q ss_pred CEEEEEEEECCCEE-EEE--CCCEEEEECCCCCEEEEEECCCCCCCC------------CCCCCCCCCCCCCCCC-CCCC
Q ss_conf 55699993089908-992--792999969999257997036876434------------4689988421224653-2112
Q 000355 1317 VVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH------------GGSPSSSISKINTDQV-GMLN 1380 (1620)
Q Consensus 1317 ~V~sIafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~------------~~s~s~~~~~~~~~~~-~~~~ 1380 (1620)
.+.+..|++++.++ +++ |++|++||..+++++..+..+...... ..++.+.......... .+..
T Consensus 110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 69843218888889998178982799907655422540247764352201688850589987899989999816882999
Q ss_pred CCCCCCC---EEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC
Q ss_conf 4677888---4897434982179877249989999977-99099998789924688608996545687510576508976
Q 000355 1381 SNTLSSG---ILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1456 (1620)
Q Consensus 1381 ~~~~s~~---v~sv~f~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~ 1456 (1620)
+...+.. +..+. .+.....++++|+|+++++++. ++.+.++|..+++.+..+...... .+..........
T Consensus 190 ~d~~~~~~~~~~~i~-~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~-~~~~~~~~~~~~---- 263 (432)
T d1qksa2 190 VDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT-PHPGRGANFVHP---- 263 (432)
T ss_dssp EETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS-BCCTTCEEEEET----
T ss_pred EECCCCCCCEEEEEC-CCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCC-CCCCCCCCEECC----
T ss_conf 984378752279983-36754265388988799995166636777614452688872148622-456766410148----
Q ss_pred CCCCCCCCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEE
Q ss_conf 33576567998899990-599099997899948999971377578998-1799999999589949999789999998848
Q 000355 1457 MQAGGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTV 1534 (1620)
Q Consensus 1457 ~s~~g~~~~g~~LasGs-~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~ 1534 (1620)
..+...++.. .++.+.+|+..+.. ...|...+.... ++++..+++++.+++.++|+....... ..
T Consensus 264 -------~~g~~~~~~~lg~~~v~~~~~~~~~----~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~--~~ 330 (432)
T d1qksa2 264 -------TFGPVWATSHMGDDSVALIGTDPEG----HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE--AE 330 (432)
T ss_dssp -------TTEEEEEEEBSSSSEEEEEECCTTT----CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS--HH
T ss_pred -------CCCCEECCCCCCCCEEEECCCCCCC----CCCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCC--CC
T ss_conf -------9883102135688358762456655----5465657779988689976888726886410211267888--77
Q ss_pred EECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEE--
Q ss_conf 4069998799964199999994993-6998266788989950000110012117987546489999924998999991--
Q 000355 1535 FKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT-- 1611 (1620)
Q Consensus 1535 l~gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs-- 1611 (1620)
....+ ..||++.+++++.|+ +++|++... ..+- +|...+..++|+|||+.++...
T Consensus 331 ---~~~sv--~vpDg~~la~~s~d~~~k~w~~~~~-----------~~l~------~~~~~v~~~~fS~DG~~v~~S~~~ 388 (432)
T d1qksa2 331 ---ISGSV--AVFDIKAMTGDGSDPEFKTLPIAEW-----------AGIT------EGQPRVVQGEFNKDGTEVWFSVWN 388 (432)
T ss_dssp ---HHTCE--EEEEGGGCCCSSSCCCEEEECHHHH-----------HTCC------SSCCEEEEEEECTTSSEEEEEEEC
T ss_pred ---EEEEE--EEEECHHHCCCCCCCCEEECCCCCC-----------CCCC------CCCCCEEEEEECCCCCEEEEEEEC
T ss_conf ---03599--9996246104556784486334344-----------4457------899868976798999999999704
Q ss_pred ---CCCCEEECC
Q ss_conf ---899499919
Q 000355 1612 ---EDGYLRLCC 1620 (1620)
Q Consensus 1612 ---~DG~IrIwd 1620 (1620)
.||.|+|||
T Consensus 389 ~~~~~g~i~i~D 400 (432)
T d1qksa2 389 GKDQESALVVVD 400 (432)
T ss_dssp CTTSCCEEEEEE
T ss_pred CCCCCCCEEEEE
T ss_conf 888888689999
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=5.8e-24 Score=176.30 Aligned_cols=279 Identities=11% Similarity=-0.017 Sum_probs=198.4
Q ss_pred CCCCCEEC--CCCCCCCCCCCEEEEECCCC--CEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEE
Q ss_conf 69992563--38999888998389970899--777874797303785035676899999149998999515889875799
Q 000355 1223 KCEPWFWF--PTPAASWDGPDFLGRVGGLK--DESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1298 (1620)
Q Consensus 1223 ~H~~~v~~--~S~dg~~~~~~~las~s~D~--~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVr 1298 (1620)
+|.+.|.+ |||||++ |++++.++ .+++|+.++..+..+.+|.+.|.+++|+||++++++++. |+.++
T Consensus 40 ~~~~~v~~~~~spDg~~-----l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----~~~~~ 110 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKV-----AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND----RFEIM 110 (360)
T ss_dssp SCCSCEEEEEECSSSEE-----EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET----TSEEE
T ss_pred CCCCCEEEEEECCCCCE-----EEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCEECC----CCCCC
T ss_conf 69998888999899999-----9999928998999998999948875089712774121145432100011----11100
Q ss_pred EEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE------------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 99589984999971477655699993089908992------------792999969999257997036876434468998
Q 000355 1299 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC------------DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1299 IWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~------------DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
+|++.++++...+..|...+.+++|++++..++.. ++.+++||..+++.......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~------------- 177 (360)
T d1k32a3 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE------------- 177 (360)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS-------------
T ss_pred CCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECCC-------------
T ss_conf 0001222100000013552023012132256652123312110002565426630455713530354-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 84212246532112467788848974349821798772499899999779909999878992468860899654568751
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V 1446 (1620)
.....++.++++|+.+++++.++.+++||........ .. ...+
T Consensus 178 ----------------------------~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~--~~-------~~~~ 220 (360)
T d1k32a3 178 ----------------------------NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF--EV-------VSKP 220 (360)
T ss_dssp ----------------------------SSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC--CS-------CBEE
T ss_pred ----------------------------CCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEE--CC-------CCCE
T ss_conf ----------------------------3221100125779999999599855753335440232--03-------6411
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEECC-----CCEEEEECCCCCEEEEEECCCCCEEEEE-ECCC---CEEEEEECCC
Q ss_conf 05765089763357656799889999059-----9099997899948999971377578998-1799---9999995899
Q 000355 1447 SAICACGSEKMQAGGAVASPSWIAAGLSS-----GQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---HLLVSSSLDK 1517 (1620)
Q Consensus 1447 ~sva~~~~~~~s~~g~~~~g~~LasGs~D-----g~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg---~~LvSgS~Dg 1517 (1620)
..+++... ...+..+++++..++++..+ ..+..++...+.. ..+..+.+.+..+. ...+ .++++++.++
T Consensus 221 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
T d1k32a3 221 FVIPLIPG-SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILIYSVPVHGEFAAYYQGAPEKG 298 (360)
T ss_dssp EEEESSTT-CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEEEECCCCCSHHHHHHCCCCCE
T ss_pred EEEECCCC-CCCCCEECCCCCCCCCCCEEECCCCCCEEECCCCCCCE-EEEEECCCCCEEEEEEECCCCEEEEEECCCCC
T ss_conf 79852469-60120687776715531136526654001012476752-67541389856999973599706999648998
Q ss_pred CEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECCCC
Q ss_conf 49999789999998848406999879--9964199999994993-699826678
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1518 tI~iWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgS~Dg-I~vwdl~~~ 1568 (1620)
.|++||+.+++ ... |.+.|. +|||||+.|++++.|+ |++|++...
T Consensus 299 ~i~~~d~~~~~---~~~---~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~ 346 (360)
T d1k32a3 299 VLLKYDVKTRK---VTE---VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346 (360)
T ss_dssp EEEEEETTTCC---EEE---EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred EEEEEECCCCE---EEE---ECCCCCEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 79999799974---988---6488687999998989999978994999999999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=9.8e-22 Score=160.93 Aligned_cols=299 Identities=9% Similarity=-0.063 Sum_probs=170.9
Q ss_pred ECCCC--CEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE--EECCCEEEEECCCCCEEEEEE
Q ss_conf 91499--98999515889875799995899849999714776556999930899089--927929999699992579970
Q 000355 1277 VGQDE--CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFA 1352 (1620)
Q Consensus 1277 fspdg--~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La--S~DgtI~IWD~~tg~~i~~l~ 1352 (1620)
++.|. -++++++. |++|++||+.+++++.++..| ..+.+++|+|++.+++ +.|+++++||+.+++......
T Consensus 26 ~~~d~~~~~~V~~~~----dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~ 100 (426)
T d1hzua2 26 NDLDLPNLFSVTLRD----AGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 100 (426)
T ss_dssp SCCCGGGEEEEEETT----TTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCCCCCEEEEEEECC----CCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE
T ss_conf 167987089999759----997999999999599999689-980389998999999999589988999756886048999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE-EEECCCCEEEEECCCCCEEE
Q ss_conf 36876434468998842122465321124677888489743498217987724998999-99779909999878992468
Q 000355 1353 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV-VGIGNGSLRFIDINQGQKLH 1431 (1620)
Q Consensus 1353 ~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lv-sgs~DgtIriWDl~tg~~i~ 1431 (1620)
..... ..... +..++++|||+.++ ++..++++++||..++.++.
T Consensus 101 i~~~~-----------------------------~~~~~------~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~ 145 (426)
T d1hzua2 101 IKIGI-----------------------------EARSV------ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 145 (426)
T ss_dssp EECCS-----------------------------EEEEE------EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEE
T ss_pred EECCC-----------------------------CCCCE------EEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEE
T ss_conf 86788-----------------------------87645------88500268898799963589769998577641257
Q ss_pred EEECCCCCCC-----CCCCCCEEEEECCC---------------------------------CCCCCCCCCCCCEEEEEE
Q ss_conf 8608996545-----68751057650897---------------------------------633576567998899990
Q 000355 1432 LWRGEPTELG-----FPSLVSAICACGSE---------------------------------KMQAGGAVASPSWIAAGL 1473 (1620)
Q Consensus 1432 ~l~~~~~~i~-----~~~~V~sva~~~~~---------------------------------~~s~~g~~~~g~~LasGs 1473 (1620)
.+..+...+. .......+..++.. ......+++++++++++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~ 225 (426)
T d1hzua2 146 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAA 225 (426)
T ss_dssp EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred EEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEE
T ss_conf 86226777364364278850389987878788885278976999992466520457756677537613778886788642
Q ss_pred -CCCCEEEEECCCCCEEEEEECCC--CCEEEEE--ECCCCE--EEEEECCCCEEEEECCCCC-----CCCCEEEECCCCC
Q ss_conf -59909999789994899997137--7578998--179999--9999589949999789999-----9988484069998
Q 000355 1474 -SSGQCRLFDVRSGNVIASWRAHD--GYVTKLA--APEDHL--LVSSSLDKTLRIWDLRRNW-----PSQPTVFKGHTNG 1541 (1620)
Q Consensus 1474 -~Dg~I~iwD~~tg~~i~~l~~H~--~~V~sVa--spdg~~--LvSgS~DgtI~iWDl~~~~-----~~~~~~l~gH~~~ 1541 (1620)
.+..+.++|..+++.+..+.... ....... .+.... .++.+.|+.+.+|+..... .+...++.+|...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~ 305 (426)
T d1hzua2 226 NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 305 (426)
T ss_dssp TTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSC
T ss_pred ECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC
T ss_conf 01100000002556278875058744434201100698774577415789659885225665203302586898668876
Q ss_pred EE--EEEECCCEEEE-------EECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEE-EEE
Q ss_conf 79--99641999999-------94993-699826678898995000011001211798754648999992499899-999
Q 000355 1542 IS--GFSVWGQDVIS-------ISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLF-LVG 1610 (1620)
Q Consensus 1542 V~--afSpdg~~LaS-------gS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lL-asg 1610 (1620)
+. +|+|+++.+++ ++.|+ |++||+.. +.................+...+.+++|+|||+.+ +++
T Consensus 306 v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t-----~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~ 380 (426)
T d1hzua2 306 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-----LDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 380 (426)
T ss_dssp CCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC-----TTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC-----CCCCEEEECCCHHCCCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 367874899861888506798802288799998987-----876708950211025677885189879999999999997
Q ss_pred ----ECCCCEEECC
Q ss_conf ----1899499919
Q 000355 1611 ----TEDGYLRLCC 1620 (1620)
Q Consensus 1611 ----s~DG~IrIwd 1620 (1620)
++||.|+|||
T Consensus 381 ~~~~~~~~~i~v~D 394 (426)
T d1hzua2 381 WNGKNDSSALVVVD 394 (426)
T ss_dssp CCCTTSCCEEEEEE
T ss_pred ECCCCCCCEEEEEE
T ss_conf 24888898299999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.92 E-value=1e-19 Score=147.06 Aligned_cols=256 Identities=11% Similarity=0.082 Sum_probs=191.2
Q ss_pred EEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEE-EECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE
Q ss_conf 8997089977787479-730378503567689999914999899-95158898757999958998499997147765569
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVF-TAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320 (1620)
Q Consensus 1243 las~s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~La-Sgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~s 1320 (1620)
.++++.|+++.+||.+ ++.++++... +.+..++|+|||++++ +++. +++|++||+.+++++.++..|. .+..
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~----~~~i~v~d~~t~~~~~~~~~~~-~~~~ 78 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAH----SNDVSIIDTATNNVIATVPAGS-SPQG 78 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGG----GTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred EEEECCCCEEEEEECCCCEEEEEEECC-CCCEEEEEECCCCEEEEEECC----CCEEEEEECCCCCEEEEEECCC-CCCC
T ss_conf 999789998999999999599999889-983699992898999999789----9989999999894103200024-6431
Q ss_pred EEEEECCCEE-EEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 9993089908-992--7929999699992579970368764344689988421224653211246778884897434982
Q 000355 1321 ICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1321 Iafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
++|++++..+ ++. ++.+.+|+..+++....+..+. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~ 117 (301)
T d1l0qa2 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-----------------------------------------S 117 (301)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------------------------------S
T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCC-----------------------------------------C
T ss_conf 10001111111111111001100124302432024444-----------------------------------------4
Q ss_pred EEEEEEECCCCEEE-EEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC-C
Q ss_conf 17987724998999-997799099998789924688608996545687510576508976335765679988999905-9
Q 000355 1398 YTCLHHIECVERLV-VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS-S 1475 (1620)
Q Consensus 1398 vt~i~~s~dg~~lv-sgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~-D 1475 (1620)
..++.+++++..++ ++..++.+.+|+..++..+..+..+. .+..+++. +++..++++.. +
T Consensus 118 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----------~~~~~~~~~~~~~ 179 (301)
T d1l0qa2 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-------SPKGIAVT-----------PDGTKVYVANFDS 179 (301)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-------SEEEEEEC-----------TTSSEEEEEETTT
T ss_pred CEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEECCCCC-------CCEEEEEE-----------CCCCCEEEECCCC
T ss_conf 23787605897155420111100110001463035315678-------84288860-----------4654013101211
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEE---CCCCEEEEECCCCCCCCCEEEECCCCCEE-EEEECCC
Q ss_conf 9099997899948999971377578998-17999999995---89949999789999998848406999879-9964199
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSS---LDKTLRIWDLRRNWPSQPTVFKGHTNGIS-GFSVWGQ 1550 (1620)
Q Consensus 1476 g~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS---~DgtI~iWDl~~~~~~~~~~l~gH~~~V~-afSpdg~ 1550 (1620)
+.+.+|+....+.......+ .....++ ++++..++.++ .+++|++||+.++ +....+..+..+.. +|+|||+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~--~~~~~~~~~~~~~~va~spdg~ 256 (301)
T d1l0qa2 180 MSISVIDTVTNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--KITARIPVGPDPAGIAVTPDGK 256 (301)
T ss_dssp TEEEEEETTTTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--EEEEEEECCSSEEEEEECTTSS
T ss_pred CCCCCCCCCCEEEEECCCCC-CCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCC--EEEEEECCCCCEEEEEEECCCC
T ss_conf 11111111100011101335-77503110111101111002100002323656998--1999984899877999918989
Q ss_pred EE-EEEECCC-EEEEECC
Q ss_conf 99-9994993-6998266
Q 000355 1551 DV-ISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1551 ~L-aSgS~Dg-I~vwdl~ 1566 (1620)
.| ++++.|+ |.+||++
T Consensus 257 ~l~va~~~~~~i~v~D~~ 274 (301)
T d1l0qa2 257 KVYVALSFCNTVSVIDTA 274 (301)
T ss_dssp EEEEEETTTTEEEEEETT
T ss_pred EEEEEECCCCEEEEEECC
T ss_conf 999998999969999999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.91 E-value=2.7e-19 Score=144.11 Aligned_cols=249 Identities=7% Similarity=0.037 Sum_probs=133.6
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE-EEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 7579999589984999971477655699993089908-992--7929999699992579970368764344689988421
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1294 DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
|++|.+||+.+++.+++++. ...+..++|+|++.++ ++. |++|++||+.+++.+..+..+..
T Consensus 11 ~~~v~v~D~~t~~~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-------------- 75 (301)
T d1l0qa2 11 SDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-------------- 75 (301)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--------------
T ss_pred CCEEEEEECCCCEEEEEEEC-CCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCC--------------
T ss_conf 99899999999959999988-998369999289899999978999899999998941032000246--------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE-EEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 22465321124677888489743498217987724998999-99779909999878992468860899654568751057
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV-VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lv-sgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sv 1449 (1620)
...+.+++++..++ ++..++.+.+||..+++....+..+. ...++
T Consensus 76 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 121 (301)
T d1l0qa2 76 ---------------------------PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-------SPLGL 121 (301)
T ss_dssp ---------------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-------SEEEE
T ss_pred ---------------------------CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCC-------CCEEE
T ss_conf ---------------------------43110001111111111111001100124302432024444-------42378
Q ss_pred EEECCCCCCCCCCCCCCCEE-EEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECC-CCEEEEECCC
Q ss_conf 65089763357656799889-9990599099997899948999971377578998-1799999999589-9499997899
Q 000355 1450 CACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLD-KTLRIWDLRR 1526 (1620)
Q Consensus 1450 a~~~~~~~s~~g~~~~g~~L-asGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~D-gtI~iWDl~~ 1526 (1620)
+++ +++..+ +++..++.+.+|+..++..+..+..+ ..+..++ ++++..+++++.+ +.+.+|+...
T Consensus 122 ~~~-----------~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (301)
T d1l0qa2 122 ALS-----------PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (301)
T ss_dssp EEC-----------TTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEE-----------CCCCEEEEEECCCCCEEEEECCCCCEEEECCCC-CCCEEEEEECCCCCEEEECCCCCCCCCCCCCC
T ss_conf 760-----------589715542011110011000146303531567-88428886046540131012111111111110
Q ss_pred CCCCCCEEEECCCCCEE-EEEECCCEEEEEE---CCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEE
Q ss_conf 99998848406999879-9964199999994---993-699826678898995000011001211798754648999992
Q 000355 1527 NWPSQPTVFKGHTNGIS-GFSVWGQDVISIS---NNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISIL 1601 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~V~-afSpdg~~LaSgS---~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafs 1601 (1620)
. ........+..+.. ++++++..++.++ .++ |.+||+. ++... .... ....+.+++|+
T Consensus 190 ~--~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~-----t~~~~------~~~~----~~~~~~~va~s 252 (301)
T d1l0qa2 190 N--SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG-----TNKIT------ARIP----VGPDPAGIAVT 252 (301)
T ss_dssp T--EEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT-----TTEEE------EEEE----CCSSEEEEEEC
T ss_pred E--EEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECC-----CCEEE------EEEC----CCCCEEEEEEE
T ss_conf 0--011101335775031101111011110021000023236569-----98199------9984----89987799991
Q ss_pred CCCCEE-EEEECCCCEEECC
Q ss_conf 499899-9991899499919
Q 000355 1602 PFSRLF-LVGTEDGYLRLCC 1620 (1620)
Q Consensus 1602 Pdg~lL-asgs~DG~IrIwd 1620 (1620)
|||+.+ ++++.||.|++||
T Consensus 253 pdg~~l~va~~~~~~i~v~D 272 (301)
T d1l0qa2 253 PDGKKVYVALSFCNTVSVID 272 (301)
T ss_dssp TTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEE
T ss_conf 89899999989999699999
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.89 E-value=6.2e-20 Score=148.52 Aligned_cols=274 Identities=11% Similarity=0.007 Sum_probs=188.4
Q ss_pred CEEEEECCCCCEEEEECC-CCEEEEEECC--CCCEEEEEECCCCCEEE-EECCCCCCCCEEEEEECCCCEEEEEEECCC-
Q ss_conf 838997089977787479-7303785035--67689999914999899-951588987579999589984999971477-
Q 000355 1241 DFLGRVGGLKDESPWKIK-ASILSSIRAH--HGALRSVAVGQDECTVF-TAGIGPGFKGTVQKWELTRINCVSGYYGHE- 1315 (1620)
Q Consensus 1241 ~~las~s~D~~i~iWd~~-~~~l~tl~gH--~~~V~svafspdg~~La-Sgs~d~~~DgtVrIWdl~tg~~i~~l~gH~- 1315 (1620)
+++++++.|+++.+||.+ +++++++..+ ...+.+++|+|||++++ +++. |+.|.+||+.+++.+..+..+.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~----~~~v~v~D~~t~~~~~~~~~~~~ 77 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCEEEEEECCBT
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECC----CCEEEEEECCCCCEEEEEECCCC
T ss_conf 69999767998999999999499999877889982379999998999999789----99499999999929888724777
Q ss_pred ----CCEEEEEEEECCCEEEE--------------ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ----65569999308990899--------------279299996999925799703687643446899884212246532
Q 000355 1316 ----EVVNDICVLSSSGRIAS--------------CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1377 (1620)
Q Consensus 1316 ----~~V~sIafs~~~~~LaS--------------~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1377 (1620)
..+..++|++++..+.. .+..+.+||..+++....+....
T Consensus 78 ~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------- 135 (337)
T d1pbyb_ 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---------------------- 135 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS----------------------
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCCCC----------------------
T ss_conf 3125402548986877579995047762034203455521203566775988414568----------------------
Q ss_pred CCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 11246778884897434982179877249989999977990999987899246886089965456875105765089763
Q 000355 1378 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1378 ~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~ 1457 (1620)
...+++++++++.+++++.+ +.+||..+++....+..+..............+......
T Consensus 136 -------------------~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (337)
T d1pbyb_ 136 -------------------QITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp -------------------SCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred -------------------CCEEEEECCCCCEEEEECCC--CCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCC
T ss_conf -------------------72189986888889997177--505663037278886147754331135776314014665
Q ss_pred CCCC------CCCCCCEEEEEECCCCEEEEECCCCCEEEE-EECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 3576------567998899990599099997899948999-971377578998-17999999995899499997899999
Q 000355 1458 QAGG------AVASPSWIAAGLSSGQCRLFDVRSGNVIAS-WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1458 s~~g------~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~-l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~ 1529 (1620)
.... ...+......+..++.+.+||..++..... +..+...+..+. ++++.+++++ ++.|++||+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~-- 270 (337)
T d1pbyb_ 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN-- 270 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--
T ss_pred CCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEC--CCCEEEEECCCC--
T ss_conf 3124663244410366045403676179998688858889832887505888742661399973--552899989889--
Q ss_pred CCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECC
Q ss_conf 98848406999879--9964199999994993-6998266
Q 000355 1530 SQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~--afSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
..+..+. +...+. +|+|||+.|++++.|+ |++||..
T Consensus 271 ~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~ 309 (337)
T d1pbyb_ 271 ASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred CEEEEEC-CCCCEEEEEECCCCCEEEEEECCCCEEEEECC
T ss_conf 6999974-89988999997899999999499929999999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.89 E-value=5.5e-21 Score=155.77 Aligned_cols=297 Identities=8% Similarity=-0.070 Sum_probs=183.0
Q ss_pred ECCCCCCCCCCCCEEEEECCCCCEEEEECC-CC--EE---EEEECCCCCEEEEEECCCCCEE-EEECCCCCCCCEEEEEE
Q ss_conf 633899988899838997089977787479-73--03---7850356768999991499989-99515889875799995
Q 000355 1229 WFPTPAASWDGPDFLGRVGGLKDESPWKIK-AS--IL---SSIRAHHGALRSVAVGQDECTV-FTAGIGPGFKGTVQKWE 1301 (1620)
Q Consensus 1229 ~~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~--~l---~tl~gH~~~V~svafspdg~~L-aSgs~d~~~DgtVrIWd 1301 (1620)
.+|||||++ +++++.|+.+++||+. +. .. ....+|.+.+.+.+|+|||+++ ++++. |++|++||
T Consensus 67 v~fSpDG~~-----l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~----~~~v~i~d 137 (432)
T d1qksa2 67 SRLSASGRY-----LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW----PPQYVIMD 137 (432)
T ss_dssp EEECTTSCE-----EEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE----TTEEEEEE
T ss_pred EEECCCCCE-----EEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCEEEEECCC----CCEEEEEE
T ss_conf 998899999-----999828999789981089812889984488987769843218888889998178----98279990
Q ss_pred CCCCEEEEEEECCC-----------CCEEEEEEEECCCEE-EEE--CCCEEEEECCCCCEEEEEECC--CCCCCCCCCCC
Q ss_conf 89984999971477-----------655699993089908-992--792999969999257997036--87643446899
Q 000355 1302 LTRINCVSGYYGHE-----------EVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQ--SMDSLHGGSPS 1365 (1620)
Q Consensus 1302 l~tg~~i~~l~gH~-----------~~V~sIafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~l~~~--~~~~~~~~s~s 1365 (1620)
..+++++..+.+|. .....+.+++++..+ ++. +++|.+||..+++.......+ ........+|+
T Consensus 138 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spd 217 (432)
T d1qksa2 138 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 217 (432)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCEECCC
T ss_conf 76554225402477643522016888505899878999899998168829999843787522799833675426538898
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCEEEEEE------CCCCEEEEEEECCCCEEEEE-ECCCCEEEEECCCCCEEEEEECCC
Q ss_conf 884212246532112467-7888489743------49821798772499899999-779909999878992468860899
Q 000355 1366 SSISKINTDQVGMLNSNT-LSSGILSTAF------DGNLYTCLHHIECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEP 1437 (1620)
Q Consensus 1366 ~~~~~~~~~~~~~~~~~~-~s~~v~sv~f------~~~~vt~i~~s~dg~~lvsg-s~DgtIriWDl~tg~~i~~l~~~~ 1437 (1620)
+................. ....+....- .............+....+. ..++.+.+|+..+... .
T Consensus 218 g~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~----~--- 290 (432)
T d1qksa2 218 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH----P--- 290 (432)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC----T---
T ss_pred CCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEECCCCCCCCEEEECCCCCCCC----C---
T ss_conf 879999516663677761445268887214862245676641014898831021356883587624566555----4---
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 65456875105765089763357656799889999059909999789994899997137757899817999999995899
Q 000355 1438 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDK 1517 (1620)
Q Consensus 1438 ~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVaspdg~~LvSgS~Dg 1517 (1620)
.+...+....+. +++..+++++.++..++|+..+.. .|.....+++.||++.+++++.|+
T Consensus 291 ---~~~~~v~~~~~~-----------~~g~~~~~~s~p~~~~lw~~~~~~------~~~~~~~sv~vpDg~~la~~s~d~ 350 (432)
T d1qksa2 291 ---DNAWKILDSFPA-----------LGGGSLFIKTHPNSQYLYVDATLN------PEAEISGSVAVFDIKAMTGDGSDP 350 (432)
T ss_dssp ---TTBTSEEEEEEC-----------SCSCCCCEECCTTCSEEEEECTTC------SSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred ---CCCCEEEEEEEC-----------CCCCEEEEEECCCCCCEEECCCCC------CCCCEEEEEEEEECHHHCCCCCCC
T ss_conf ---656577799886-----------899768887268864102112678------887703599999624610455678
Q ss_pred CEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEE-----CCC-EEEEECC
Q ss_conf 49999789999998848406999879--9964199999994-----993-6998266
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISIS-----NNK-IGLSSLS 1566 (1620)
Q Consensus 1518 tI~iWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgS-----~Dg-I~vwdl~ 1566 (1620)
++++|++.++. .+..|...|. +|||||+.++.+. .++ |.+||..
T Consensus 351 ~~k~w~~~~~~-----~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~ 402 (432)
T d1qksa2 351 EFKTLPIAEWA-----GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 402 (432)
T ss_dssp CEEEECHHHHH-----TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CEEECCCCCCC-----CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECC
T ss_conf 44863343444-----45789986897679899999999970488888868999999
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.89 E-value=3.2e-21 Score=157.38 Aligned_cols=278 Identities=9% Similarity=-0.009 Sum_probs=179.8
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEE-CCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEE
Q ss_conf 33899988899838997089977787479-73037850-35676899999149998999515889875799995899849
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1307 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~-gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~ 1307 (1620)
+|++++.+ +++++.|+++.+||++ ++++++++ .|...+.+++|+|||++++.++. .++.|.+||+.+++.
T Consensus 3 a~~~~~~~-----l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~---~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 3 ALKAGHEY-----MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCTTCEE-----EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEE
T ss_pred CCCCCCCE-----EEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEEC---CCCCEEEEECCCCEE
T ss_conf 58899969-----9998699979999999998999999489997045999789899999978---999399996756713
Q ss_pred EEEEECCC------CCEEEEEEEECCCEE-EE-------------ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 99971477------655699993089908-99-------------27929999699992579970368764344689988
Q 000355 1308 VSGYYGHE------EVVNDICVLSSSGRI-AS-------------CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1367 (1620)
Q Consensus 1308 i~~l~gH~------~~V~sIafs~~~~~L-aS-------------~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1367 (1620)
+..+.... ..+..++|++++.++ ++ .+..+.+||..+++....+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------- 140 (346)
T d1jmxb_ 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-------------- 140 (346)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------------
T ss_pred EEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEE--------------
T ss_conf 123103654345477417999905888899970577521565146762489985256326568873--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 42122465321124677888489743498217987724998999997799099998789924688608996545687510
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~ 1447 (1620)
...+.....+...+++..+++ ++.+.+||+.+++.+..+..+... .
T Consensus 141 ------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------~ 186 (346)
T d1jmxb_ 141 ------------------------FPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPLRNWN-------R 186 (346)
T ss_dssp ------------------------EECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECSTTCC-------C
T ss_pred ------------------------EECCCCEEEEEECCCCEEEEE---CCCCEEEECCCCCEEEEEECCCCC-------C
T ss_conf ------------------------102474399995278789984---796269980699789999648986-------6
Q ss_pred EEEEECCCCCCC---------------CCCCCCCCEEEEEECCCCEEEEECCCCCEEEE-EECCCCCEEEEE-ECCCCEE
Q ss_conf 576508976335---------------76567998899990599099997899948999-971377578998-1799999
Q 000355 1448 AICACGSEKMQA---------------GGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS-WRAHDGYVTKLA-APEDHLL 1510 (1620)
Q Consensus 1448 sva~~~~~~~s~---------------~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~-l~~H~~~V~sVa-spdg~~L 1510 (1620)
.+++++...... .........++++..++.+.+||..++..... +..+...+..+. ++++..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (346)
T d1jmxb_ 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266 (346)
T ss_dssp TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCEE
T ss_conf 23771255289998649981676512311126732575404783499997778836878763156606888971799789
Q ss_pred EEEECCCCEEEEECCCCCCCCCEEEE-CCCCCEEEEEECCCEEEEEECCC-EEEEECC
Q ss_conf 99958994999978999999884840-69998799964199999994993-6998266
Q 000355 1511 VSSSLDKTLRIWDLRRNWPSQPTVFK-GHTNGISGFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1511 vSgS~DgtI~iWDl~~~~~~~~~~l~-gH~~~V~afSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
+++.. +.|.+||..++ +.+..+. ++.-.-.+|+|||+.+++++.|+ |.+||.+
T Consensus 267 ~~~~~-~~v~v~d~~~~--~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 267 IYGVL-NRLAKYDLKQR--KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp EEEEE-SEEEEEETTTT--EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred EEECC-CEEEEEECCCC--CEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECC
T ss_conf 99429-83899989999--399997499977899996899999999489929999996
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=1.2e-22 Score=167.21 Aligned_cols=143 Identities=16% Similarity=0.015 Sum_probs=104.5
Q ss_pred EEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH--------HHHHHHHCCCCCHHHHHHHCCCCCC
Q ss_conf 23640156540079999994366664466308999981278777066--------7989884089917588850248865
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--------SKNFLRLIGVPSFDESSVPGCLRHP 177 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~--------~~~~~~~~~~~~~~Ei~iL~~L~Hp 177 (1620)
+.++++||+|+||+||+|.+ .+|..||||.++........ ...+..+....+.+|...+..+.|+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~-------~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 74 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYS-------EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEE-------TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CHHCCEEEECCCEEEEEEEC-------CCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02277802485659999997-------99999999998604434666556563000888999999778999999981699
Q ss_pred CCCCEEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCE
Q ss_conf 51350069996997999972799898989862999999999999999999999999993991304779995375579933
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~ 257 (1620)
+++..+++.. .+++||++++..... ++...+..++.|++.++.|||+++|+||||||+|||+++++
T Consensus 75 ~v~~~~~~~~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-- 140 (191)
T d1zara2 75 AVPKVYAWEG----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-- 140 (191)
T ss_dssp SSCCEEEEET----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE--
T ss_pred CCCEEEEECC----CEEEEEEECCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCC--
T ss_conf 9144998628----889999504565420--------01578999999999999998268889836890361142898--
Q ss_pred EEEEEECCCCCCC
Q ss_conf 7999504786557
Q 000355 258 WLYICDKPLVGFN 270 (1620)
Q Consensus 258 ~iKI~DFGlar~~ 270 (1620)
++|+|||+|+..
T Consensus 141 -~~liDFG~a~~~ 152 (191)
T d1zara2 141 -IWIIDFPQSVEV 152 (191)
T ss_dssp -EEECCCTTCEET
T ss_pred -EEEEECCCCCCC
T ss_conf -999877884308
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=1.3e-19 Score=146.39 Aligned_cols=264 Identities=11% Similarity=0.065 Sum_probs=146.6
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEECCCC-----CEEEEEECCCCCEEEEECCC--------CCCCC
Q ss_conf 33899988899838997089977787479-730378503567-----68999991499989995158--------89875
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHG-----ALRSVAVGQDECTVFTAGIG--------PGFKG 1295 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~gH~~-----~V~svafspdg~~LaSgs~d--------~~~Dg 1295 (1620)
+|||||++ ++++++.++.+.+||+. ++.+.++..+.. .+..++|+|+++.+++++.+ ...+.
T Consensus 40 ~~spDg~~----l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T d1pbyb_ 40 MVAPGGRI----AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp EECTTSSE----EEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred EECCCCCE----EEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCC
T ss_conf 99999899----99997899949999999992988872477731254025489868775799950477620342034555
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999589984999971477655699993089908992792999969999257997036876434468998842122465
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1296 tVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
.+.+||..+++....+. +...+.+++|++++.++.+.++.+.+||..+++....+..+.........+.+..
T Consensus 116 ~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 187 (337)
T d1pbyb_ 116 RVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLA------- 187 (337)
T ss_dssp EEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCC-------
T ss_pred CEEECCCCCCEEEEECC-CCCCCEEEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEECCCCCE-------
T ss_conf 21203566775988414-5687218998688888999717750566303727888614775433113577631-------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
Q ss_conf 32112467788848974349821798772499899999779909999878992468860899654568751057650897
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~ 1455 (1620)
...... ........ ......+......++.++.+.+||..++......... +...+...++.
T Consensus 188 --~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--- 249 (337)
T d1pbyb_ 188 --VWNQHE-SSGVMATP-------FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-----MDVFYFSTAVN--- 249 (337)
T ss_dssp --CCCCCT-TTTEEEEE-------EEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE-----CSSCEEEEEEC---
T ss_pred --EECCCC-CCCEEEEE-------EEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEECC-----CCCCEEEEEEC---
T ss_conf --401466-53124663-------2444103660454036761799986888588898328-----87505888742---
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEE
Q ss_conf 633576567998899990599099997899948999971377578998-1799999999589949999789999998848
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTV 1534 (1620)
Q Consensus 1456 ~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~ 1534 (1620)
+++.+++.+ ++.+++||+.+++.+..+. +...+.+++ +|||++|++++.|++|++||..++ +.+.+
T Consensus 250 --------~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~--~~v~~ 316 (337)
T d1pbyb_ 250 --------PAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL--EKKGQ 316 (337)
T ss_dssp --------TTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC--CEEEE
T ss_pred --------CCCEEEEEC--CCCEEEEECCCCCEEEEEC-CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC--CEEEE
T ss_conf --------661399973--5528999898896999974-8998899999789999999949992999999987--69899
Q ss_pred EE
Q ss_conf 40
Q 000355 1535 FK 1536 (1620)
Q Consensus 1535 l~ 1536 (1620)
++
T Consensus 317 i~ 318 (337)
T d1pbyb_ 317 VD 318 (337)
T ss_dssp EE
T ss_pred EE
T ss_conf 98
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.88 E-value=3.5e-17 Score=129.47 Aligned_cols=271 Identities=10% Similarity=-0.014 Sum_probs=167.2
Q ss_pred CCCCCCCCCCCCEEEEE-----CCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCCC------CCCCEE
Q ss_conf 33899988899838997-----089977787479-730378503567689999914999899951588------987579
Q 000355 1230 FPTPAASWDGPDFLGRV-----GGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP------GFKGTV 1297 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~-----s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~------~~DgtV 1297 (1620)
++||||+. +... +.+..+.+||.. ++.+.++.++..+ .++|+|||+++++++.+. +.|+.|
T Consensus 27 a~spdg~~-----~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v 99 (373)
T d2madh_ 27 APGADGRR-----SYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CCCCCCCE-----EEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCCCCCEEE
T ss_conf 01899978-----99973422578765999989999799999579886--079868999899996057753212453189
Q ss_pred EEEECCCCEEEEEEECCCCCEEE-------EEEEECCCEE--EEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 99958998499997147765569-------9993089908--992--792999969999257997036876434468998
Q 000355 1298 QKWELTRINCVSGYYGHEEVVND-------ICVLSSSGRI--ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1298 rIWdl~tg~~i~~l~gH~~~V~s-------Iafs~~~~~L--aS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
++||+.+++.+..+..+...... +.|++++..+ ... ++.+.+|+..+++.......
T Consensus 100 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------------- 166 (373)
T d2madh_ 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSS------------- 166 (373)
T ss_pred EEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEECC-------------
T ss_conf 9997778938889726885136851689708998589937999986987467762368728998245-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCE-EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 8421224653211246778884897434982179877249989-999977990999987899246886089965456875
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSL 1445 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~-lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~ 1445 (1620)
..++.++++++. +++.+.|+++.+||...+..................
T Consensus 167 -------------------------------~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (373)
T d2madh_ 167 -------------------------------PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred -------------------------------CEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCE
T ss_conf -------------------------------2069996289919999947993999974774266788630036675304
Q ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE--EEECCCCC----------EEEEE-ECCC-----
Q ss_conf 105765089763357656799889999059909999789994899--99713775----------78998-1799-----
Q 000355 1446 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA--SWRAHDGY----------VTKLA-APED----- 1507 (1620)
Q Consensus 1446 V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~--~l~~H~~~----------V~sVa-spdg----- 1507 (1620)
.....+. ++ ..++..+.++.+.+|+..++.... .+..+... ...++ ++++
T Consensus 216 ~~~~~~~-----------~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 283 (373)
T d2madh_ 216 TQPAQAN-----------KS-GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred EEEEEEC-----------CC-CEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 3458878-----------99-42999258965999976899078977630564757866413674133577149975999
Q ss_pred -----CEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCE--EEEEECCC-EEEEECC
Q ss_conf -----999999589949999789999998848406999879--99641999--99994993-6998266
Q 000355 1508 -----HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD--VISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1508 -----~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~--LaSgS~Dg-I~vwdl~ 1566 (1620)
..+++...++.+.+||..++ +....+. +...+. +|+|||+. +++++.|+ |++||+.
T Consensus 284 ~~~~~~~~~~~~~~~~v~~~d~~t~--~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~ 349 (373)
T d2madh_ 284 LTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred ECCCCCEEEEECCCCEEEEEECCCC--CEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCEEEEEECC
T ss_conf 5488824786258986999989999--6989866-8998258999989998999996799929999999
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.87 E-value=2.4e-19 Score=144.44 Aligned_cols=273 Identities=11% Similarity=-0.007 Sum_probs=184.4
Q ss_pred EEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEEEECCCEE-EEE--CCCEEEEECCCCCEEEE
Q ss_conf 99914999899951588987579999589984999971-477655699993089908-992--79299996999925799
Q 000355 1275 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSV 1350 (1620)
Q Consensus 1275 vafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~-gH~~~V~sIafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~ 1350 (1620)
++|+++++++++++. |++|.+||+.+++.+.+++ .|...+.+++|+|++.++ ++. |+.|.+||+.+++.+..
T Consensus 2 ~a~~~~~~~l~~~~~----~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~ 77 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 77 (346)
T ss_dssp CCCCTTCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCCCCCEEEEECC----CCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEE
T ss_conf 558899969999869----9979999999998999999489997045999789899999978999399996756713123
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEE------------CCCC
Q ss_conf 7036876434468998842122465321124677888489743498217987724998999997------------7990
Q 000355 1351 FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI------------GNGS 1418 (1620)
Q Consensus 1351 l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs------------~Dgt 1418 (1620)
+.......... . ....+++++||+.+++++ .++.
T Consensus 78 ~~~~~~~~~~~-------------------------------~---~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~ 123 (346)
T d1jmxb_ 78 ANLSSVPGEVG-------------------------------R---SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123 (346)
T ss_dssp EESCCSTTEEE-------------------------------E---CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred ECCCCCCCCCC-------------------------------C---CEEEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 10365434547-------------------------------7---4179999058888999705775215651467624
Q ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 99998789924688608996545687510576508976335765679988999905990999978999489999713775
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1498 (1620)
Q Consensus 1419 IriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~ 1498 (1620)
+.+||..+++....+..+.. +..+..+.+. +++..++ . ++.+.+||+.+++.+..+..+..
T Consensus 124 i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~- 184 (346)
T d1jmxb_ 124 LEVFSTADGLEAKPVRTFPM----PRQVYLMRAA-----------DDGSLYV-A--GPDIYKMDVKTGKYTVALPLRNW- 184 (346)
T ss_dssp EEEEEGGGGGGBCCSEEEEC----CSSCCCEEEC-----------TTSCEEE-E--SSSEEEECTTTCCEEEEECSTTC-
T ss_pred EEEEECCCCEEEEEEEEEEC----CCCEEEEEEC-----------CCCEEEE-E--CCCCEEEECCCCCEEEEEECCCC-
T ss_conf 89985256326568873102----4743999952-----------7878998-4--79626998069978999964898-
Q ss_pred EEEEE-ECC--------------------------CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEECC
Q ss_conf 78998-179--------------------------99999995899499997899999988484069998799--96419
Q 000355 1499 VTKLA-APE--------------------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG 1549 (1620)
Q Consensus 1499 V~sVa-spd--------------------------g~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~V~a--fSpdg 1549 (1620)
...+. +|+ ...++++..++.+.+||..++. .......+|...+.+ +++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
T d1jmxb_ 185 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK-THTQEFADLTELYFTGLRSPKD 263 (346)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC-EEEEEEEECSSCEEEEEECSSC
T ss_pred CCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCC-EEEEEEECCCCEEEEEEEECCC
T ss_conf 662377125528999864998167651231112673257540478349999777883-6878763156606888971799
Q ss_pred CEEEEEECCCEEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 99999949936998266788989950000110012117987546489999924998999991899499919
Q 000355 1550 QDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1550 ~~LaSgS~DgI~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrIwd 1620 (1620)
..++.+..+.|.+||.. ++.. +.... +...+.+++|+|||+.+++|+.||.|++||
T Consensus 264 ~~~~~~~~~~v~v~d~~-----~~~~------~~~~~----~~~~~~~va~s~DG~~l~v~~~d~~v~v~D 319 (346)
T d1jmxb_ 264 PNQIYGVLNRLAKYDLK-----QRKL------IKAAN----LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN 319 (346)
T ss_dssp TTEEEEEESEEEEEETT-----TTEE------EEEEE----CSSCCCEEEECSSSSCEEEESBSSEEEEEE
T ss_pred CEEEEECCCEEEEEECC-----CCCE------EEEEC----CCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 78999429838999899-----9939------99974----999778999968999999994899299999
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=1.8e-16 Score=124.53 Aligned_cols=274 Identities=9% Similarity=-0.002 Sum_probs=150.5
Q ss_pred CCCCCCCCCCCCEEEEE-----CCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCC------CCCCCEE
Q ss_conf 33899988899838997-----089977787479-73037850356768999991499989995158------8987579
Q 000355 1230 FPTPAASWDGPDFLGRV-----GGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTV 1297 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~-----s~D~~i~iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d------~~~DgtV 1297 (1620)
+++||++. +... +.+..+.+||.. ++.+.++..+..+ .++|||||++++.++.. ++.|+.|
T Consensus 8 a~spdg~~-----~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 8 APAPDARR-----VYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCCTTE-----EEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EECCCCCE-----EEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 65899999-----99982664777671999999999499999899998--569948999999996777642015899989
Q ss_pred EEEECCCCEEEEEEECCCC-------CEEEEEEEECCCEE--EEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 9995899849999714776-------55699993089908--992--792999969999257997036876434468998
Q 000355 1298 QKWELTRINCVSGYYGHEE-------VVNDICVLSSSGRI--ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1298 rIWdl~tg~~i~~l~gH~~-------~V~sIafs~~~~~L--aS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
++||+.+++.+..+..+.. ....++|++++..+ ++. +..+.+|+..+++.+..+..+....
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 152 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH-------- 152 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE--------
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCE--------
T ss_conf 999999997988980588640311798734999338871577327988204543057883766770587404--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 84212246532112467788848974349821798772499899999779909999878992468860899654568751
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V 1446 (1620)
... . .....++.+.|+...++..........+........+...+
T Consensus 153 -----------------------~~~-~-----------~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 197 (355)
T d2bbkh_ 153 -----------------------IFP-T-----------APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 197 (355)
T ss_dssp -----------------------EEE-E-----------ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred -----------------------EEE-C-----------CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEE
T ss_conf -----------------------730-6-----------99636999389998999834787379996243330001106
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE--EEECCC----------CCEEEEE-ECCCCEEEEE
Q ss_conf 05765089763357656799889999059909999789994899--997137----------7578998-1799999999
Q 000355 1447 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA--SWRAHD----------GYVTKLA-APEDHLLVSS 1513 (1620)
Q Consensus 1447 ~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~--~l~~H~----------~~V~sVa-spdg~~LvSg 1513 (1620)
....+. .++..++.++.++.+++|+..+++... ....+. .....++ ++++..++..
T Consensus 198 ~~~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~ 266 (355)
T d2bbkh_ 198 NHPAYS-----------QKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLL 266 (355)
T ss_dssp SCCEEE-----------TTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred EECCCC-----------CCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEE
T ss_conf 102153-----------899738874699829999658990799844578441268543303510899980799767887
Q ss_pred ECC----------CCEEEEECCCCCCCCCEEEECCCCC-EEEEEECCC--EEEEEECCC-EEEEECC
Q ss_conf 589----------9499997899999988484069998-799964199--999994993-6998266
Q 000355 1514 SLD----------KTLRIWDLRRNWPSQPTVFKGHTNG-ISGFSVWGQ--DVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1514 S~D----------gtI~iWDl~~~~~~~~~~l~gH~~~-V~afSpdg~--~LaSgS~Dg-I~vwdl~ 1566 (1620)
+.+ ..|.+||..++ +....+...... -.+|+|||+ ++++++.|+ |.+||+.
T Consensus 267 ~~~~~~~~~~~~~~~v~v~d~~t~--~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~ 331 (355)
T d2bbkh_ 267 VDQRDEWRHKTASRFVVVLDAKTG--ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331 (355)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTC--CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEECCCCCEEEEEECCCC--CEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECC
T ss_conf 406871265179975999867888--49899668998779999289996999997899989999999
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=9e-16 Score=119.79 Aligned_cols=271 Identities=7% Similarity=0.053 Sum_probs=168.9
Q ss_pred EEEEECCCCCEEEEECC-CCEEEE--EECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEE---ECCC
Q ss_conf 38997089977787479-730378--50356768999991499989995158898757999958998499997---1477
Q 000355 1242 FLGRVGGLKDESPWKIK-ASILSS--IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY---YGHE 1315 (1620)
Q Consensus 1242 ~las~s~D~~i~iWd~~-~~~l~t--l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l---~gH~ 1315 (1620)
++++++.|++|++|++. ...+.. ...|.+.|.+++|+|||++|++++.+ |++|++|++.......++ ..+.
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~---d~~i~~~~i~~~~~~~~~~~~~~~~ 82 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP---EFRVLAYRIAPDDGALTFAAESALP 82 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT---TTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECC---CCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 9998789993899998399976999997579988689995897999999778---9969999996898707985301369
Q ss_pred CCEEEEEEEECCCEEE-EE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 6556999930899089-92--79299996999925799703687643446899884212246532112467788848974
Q 000355 1316 EVVNDICVLSSSGRIA-SC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTA 1392 (1620)
Q Consensus 1316 ~~V~sIafs~~~~~La-S~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~ 1392 (1620)
..+..++|+|++.+++ +. ++++.+|+.............
T Consensus 83 ~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-------------------------------------- 124 (333)
T d1ri6a_ 83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-------------------------------------- 124 (333)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--------------------------------------
T ss_pred CCCEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEECCCCC--------------------------------------
T ss_conf 985499995999887420568883022001110000001003--------------------------------------
Q ss_pred ECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEE-
Q ss_conf 34982179877249989999977-9909999878992468860899654568751057650897633576567998899-
Q 000355 1393 FDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIA- 1470 (1620)
Q Consensus 1393 f~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~La- 1470 (1620)
..+....++.++++++.++.++. +..+.+|+..+......................+++.+ ++.+++
T Consensus 125 ~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~-----------~~~~~~~ 193 (333)
T d1ri6a_ 125 EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-----------NEQYAYC 193 (333)
T ss_dssp CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-----------TSSEEEE
T ss_pred CCCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEEEC-----------CCEEEEE
T ss_conf 77853149886301013102565542056897326874100100013340388752799960-----------2014786
Q ss_pred EEECCCCEEEEECCCCC----EEEEEE------CCCCCEEEEE-ECCCCEEE-EEECCCCEEEEECCCCCCCCCEEEE--
Q ss_conf 99059909999789994----899997------1377578998-17999999-9958994999978999999884840--
Q 000355 1471 AGLSSGQCRLFDVRSGN----VIASWR------AHDGYVTKLA-APEDHLLV-SSSLDKTLRIWDLRRNWPSQPTVFK-- 1536 (1620)
Q Consensus 1471 sGs~Dg~I~iwD~~tg~----~i~~l~------~H~~~V~sVa-spdg~~Lv-SgS~DgtI~iWDl~~~~~~~~~~l~-- 1536 (1620)
+....+...+|+..... ...... ........++ ++++++++ ++..++.+.+|++.... ......
T Consensus 194 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 271 (333)
T d1ri6a_ 194 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG--SVLSKEGF 271 (333)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CCEEEEEE
T ss_pred ECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC--CEEEEEEE
T ss_conf 2046672178851035552021002234306877655312689951567205504568827878873999--78999999
Q ss_pred -CCCCCE--EEEEECCCEEEEEE-CCC-EEEEECC
Q ss_conf -699987--99964199999994-993-6998266
Q 000355 1537 -GHTNGI--SGFSVWGQDVISIS-NNK-IGLSSLS 1566 (1620)
Q Consensus 1537 -gH~~~V--~afSpdg~~LaSgS-~Dg-I~vwdl~ 1566 (1620)
.....+ .+|+|||++|++++ .++ |.+|++.
T Consensus 272 ~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 272 QPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp EECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEE
T ss_conf 67899762899907989999998899939999997
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=2.2e-16 Score=123.99 Aligned_cols=50 Identities=22% Similarity=0.345 Sum_probs=21.2
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEE-ECCCC--EEEEEECCCCEEEEECCCC
Q ss_conf 099997899948999971377578998-17999--9999958994999978999
Q 000355 1477 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH--LLVSSSLDKTLRIWDLRRN 1527 (1620)
Q Consensus 1477 ~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~--~LvSgS~DgtI~iWDl~~~ 1527 (1620)
.|.+||..+++.+..+. +...+.+++ +|||+ ++++++.|++|++||++++
T Consensus 281 ~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg 333 (355)
T d2bbkh_ 281 FVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 333 (355)
T ss_dssp EEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEECCCCCEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 59998678884989966-899877999928999699999789998999999999
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.76 E-value=5.7e-14 Score=107.36 Aligned_cols=285 Identities=10% Similarity=-0.043 Sum_probs=180.4
Q ss_pred EECCCCCEEEEEECCCCCEEEEECCC-CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEE-----------
Q ss_conf 50356768999991499989995158-898757999958998499997147765569999308990899-----------
Q 000355 1265 IRAHHGALRSVAVGQDECTVFTAGIG-PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS----------- 1332 (1620)
Q Consensus 1265 l~gH~~~V~svafspdg~~LaSgs~d-~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS----------- 1332 (1620)
..++.+++.+++++||++.++..... .+.++.|.+||..+++.+.++.++... .++|+|++.+++.
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~ 93 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCC
T ss_conf 456789865630189997899973422578765999989999799999579886--079868999899996057753212
Q ss_pred -ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf -2792999969999257997036876434468998842122465321124677888489743498217987724998999
Q 000355 1333 -CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1411 (1620)
Q Consensus 1333 -~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lv 1411 (1620)
.|+.|.+||..+++.+..+..+... ......+ ...+.++++++.++
T Consensus 94 ~~~~~v~v~D~~t~~~~~~~~~~~~~------------------------------~~~~~~~---~~~~~~s~dg~~~~ 140 (373)
T d2madh_ 94 KRTDYVEVFDPVTFLPIADIELPDAP------------------------------RFDVGPY---SWMNANTPNNADLL 140 (373)
T ss_pred CCCEEEEEEECCCCCEEEEEECCCCC------------------------------EEEECCC---CCCEEEEECCCCEE
T ss_conf 45318999977789388897268851------------------------------3685168---97089985899379
Q ss_pred EEE--CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CEEEEEECCCCEEEEECCCCCE
Q ss_conf 997--7990999987899246886089965456875105765089763357656799-8899990599099997899948
Q 000355 1412 VGI--GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASP-SWIAAGLSSGQCRLFDVRSGNV 1488 (1620)
Q Consensus 1412 sgs--~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g-~~LasGs~Dg~I~iwD~~tg~~ 1488 (1620)
... .++.+.+|+..+.+....... ..++.+. +++ ..+++++.|+.+.+||..++..
T Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s-----------~~g~~~~v~~~~dg~~~~~~~~~~~~ 199 (373)
T d2madh_ 141 FFQFAAGPAVGLVVQGGSSDDQLLSS----------PTCYHIH-----------PGAPSTFYLLCAQGGLAKTDHAGGAA 199 (373)
T ss_pred EEEECCCCCEEEEECCCCEEEEEECC----------CEEEEEE-----------CCCCCEEEEECCCCEEEEEECCCCEE
T ss_conf 99986987467762368728998245----------2069996-----------28991999994799399997477426
Q ss_pred EEEEECCC------CCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCC------------EEEEEECCC
Q ss_conf 99997137------757899817999999995899499997899999988484069998------------799964199
Q 000355 1489 IASWRAHD------GYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG------------ISGFSVWGQ 1550 (1620)
Q Consensus 1489 i~~l~~H~------~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~~------------V~afSpdg~ 1550 (1620)
......+. .....+....+..++..+.++.+.+|+...+..........+... ..++++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 279 (373)
T d2madh_ 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred EEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 67886300366753043458878994299925896599997689907897763056475786641367413357714997
Q ss_pred EEE----------EEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEECCCC--EEEEEECCCCEE
Q ss_conf 999----------994993-6998266788989950000110012117987546489999924998--999991899499
Q 000355 1551 DVI----------SISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLR 1617 (1620)
Q Consensus 1551 ~La----------SgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~--lLasgs~DG~Ir 1617 (1620)
.++ +...++ +.+||.. ++.. +... .+...+.+++|+|||+ ++++++.||.|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~v~~~d~~-----t~~~------~~~~----~~~~~~~~~a~spDG~~~l~vt~~~d~~v~ 344 (373)
T d2madh_ 280 GIYLLTSEQSAWKLHAAAKEVTSVTGL-----VGQT------SSQI----SLGHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred EEEEECCCCCEEEEECCCCEEEEEECC-----CCCE------EEEE----CCCCCEEEEEECCCCCEEEEEEECCCCEEE
T ss_conf 599954888247862589869999899-----9969------8986----689982589999899989999967999299
Q ss_pred ECC
Q ss_conf 919
Q 000355 1618 LCC 1620 (1620)
Q Consensus 1618 Iwd 1620 (1620)
+||
T Consensus 345 v~D 347 (373)
T d2madh_ 345 IYD 347 (373)
T ss_pred EEE
T ss_conf 999
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=2.6e-14 Score=109.70 Aligned_cols=268 Identities=9% Similarity=0.073 Sum_probs=157.2
Q ss_pred EEEECCCCCCCCEEEEEECCCCE---EEEEEECCCCCEEEEEEEECCCEE-EEE--CCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 99951588987579999589984---999971477655699993089908-992--792999969999257997036876
Q 000355 1284 VFTAGIGPGFKGTVQKWELTRIN---CVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMD 1357 (1620)
Q Consensus 1284 LaSgs~d~~~DgtVrIWdl~tg~---~i~~l~gH~~~V~sIafs~~~~~L-aS~--DgtI~IWD~~tg~~i~~l~~~~~~ 1357 (1620)
+++++. |++|++|++.+.. .++.+ .|.+.|.+++|+|++.+| ++. |++|++|++..+.....+..+.
T Consensus 7 ~v~~~~----~~~I~v~~~~~~~~l~~~~~~-~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~-- 79 (333)
T d1ri6a_ 7 YIASPE----SQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-- 79 (333)
T ss_dssp EEEEGG----GTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE--
T ss_pred EEECCC----CCCEEEEEECCCCCEEEEEEE-CCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEC--
T ss_conf 998789----993899998399976999997-5799886899958979999997789969999996898707985301--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCEEEEEECC
Q ss_conf 4344689988421224653211246778884897434982179877249989999977-990999987899246886089
Q 000355 1358 SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGE 1436 (1620)
Q Consensus 1358 ~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~tg~~i~~l~~~ 1436 (1620)
..+.....+++++||+.+++++. ++++.+|+.............
T Consensus 80 -----------------------------------~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~ 124 (333)
T d1ri6a_ 80 -----------------------------------ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 124 (333)
T ss_dssp -----------------------------------ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred -----------------------------------CCCCCCEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEECCCCC
T ss_conf -----------------------------------369985499995999887420568883022001110000001003
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE-CCCCEEEEECCCCCEEEEE-----E-CCCCCEEEEE-ECCCC
Q ss_conf 9654568751057650897633576567998899990-5990999978999489999-----7-1377578998-17999
Q 000355 1437 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASW-----R-AHDGYVTKLA-APEDH 1508 (1620)
Q Consensus 1437 ~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs-~Dg~I~iwD~~tg~~i~~l-----~-~H~~~V~sVa-spdg~ 1508 (1620)
. +...+.++.++ ++++.+++++ .+..+.+|+..+....... . ........++ ++++.
T Consensus 125 ~----~~~~~~~v~~s-----------~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~ 189 (333)
T d1ri6a_ 125 E----GLDGCHSANIS-----------PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 189 (333)
T ss_dssp C----CCTTBCCCEEC-----------TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred C----CCCCCEEEEEE-----------ECCEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEEECCCE
T ss_conf 7----78531498863-----------01013102565542056897326874100100013340388752799960201
Q ss_pred EEEEE-ECCCCEEEEECCCCCCCCC--EEEEC------CCCCEE--EEEECCCEEEEEE-CCC-EEEEECCCCCCCCCCC
Q ss_conf 99999-5899499997899999988--48406------999879--9964199999994-993-6998266788989950
Q 000355 1509 LLVSS-SLDKTLRIWDLRRNWPSQP--TVFKG------HTNGIS--GFSVWGQDVISIS-NNK-IGLSSLSKSADEDGQH 1575 (1620)
Q Consensus 1509 ~LvSg-S~DgtI~iWDl~~~~~~~~--~~l~g------H~~~V~--afSpdg~~LaSgS-~Dg-I~vwdl~~~~~~~g~~ 1575 (1620)
.++.. ...+...+|+......... ..... ...... +++++++.++... .++ +.+|++.... +..
T Consensus 190 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~---~~~ 266 (333)
T d1ri6a_ 190 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG---SVL 266 (333)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---CCE
T ss_pred EEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC---CEE
T ss_conf 47862046672178851035552021002234306877655312689951567205504568827878873999---789
Q ss_pred EEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEE-ECCCCEEEC
Q ss_conf 00011001211798754648999992499899999-189949991
Q 000355 1576 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG-TEDGYLRLC 1619 (1620)
Q Consensus 1576 ~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg-s~DG~IrIw 1619 (1620)
...... .....+.+++|+|||+.|+++ ++++.|++|
T Consensus 267 -----~~~~~~---~~~~~p~~~a~spDGk~l~va~~~~~~v~v~ 303 (333)
T d1ri6a_ 267 -----SKEGFQ---PTETQPRGFNVDHSGKYLIAAGQKSHHISVY 303 (333)
T ss_dssp -----EEEEEE---ECSSSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred -----EEEEEE---CCCCCEEEEEEECCCCEEEEEECCCCEEEEE
T ss_conf -----999996---7899762899907989999998899939999
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.65 E-value=2.6e-14 Score=109.70 Aligned_cols=114 Identities=4% Similarity=-0.054 Sum_probs=79.3
Q ss_pred CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEE-----EEECCCCCEEEEEECCCCCEEEEECCC-----CCCCCEEEE
Q ss_conf 3899988899838997089977787479-73037-----850356768999991499989995158-----898757999
Q 000355 1231 PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILS-----SIRAHHGALRSVAVGQDECTVFTAGIG-----PGFKGTVQK 1299 (1620)
Q Consensus 1231 ~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~-----tl~gH~~~V~svafspdg~~LaSgs~d-----~~~DgtVrI 1299 (1620)
|.+|+.+ +. ..|+++.+||.. +.... ++.+|...|.++.|||||++|+.++.. .++++.+.+
T Consensus 24 W~~d~~~-----~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 24 WISDHEY-----LY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp ECSSSEE-----EE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ECCCCEE-----EE--ECCCCEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEE
T ss_conf 6899979-----99--7599499998899978999701564431676540599898897999977710001046734999
Q ss_pred EECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE-CCCEEEEECCCCCEEEEEE
Q ss_conf 9589984999971477655699993089908992-7929999699992579970
Q 000355 1300 WELTRINCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFA 1352 (1620)
Q Consensus 1300 Wdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~-DgtI~IWD~~tg~~i~~l~ 1352 (1620)
||+.+++. ..+..|.+.+..+.|+|++..+|.. |+.+.+|+..+++..+...
T Consensus 97 ~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~ 149 (470)
T d2bgra1 97 YDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITW 149 (470)
T ss_dssp EETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCS
T ss_pred EECCCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEEE
T ss_conf 98988851-312468742310101467641357514641379889994653210
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.63 E-value=3.3e-13 Score=102.10 Aligned_cols=274 Identities=8% Similarity=-0.076 Sum_probs=149.7
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEE--EEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEECCC------CCCCCEEEEE
Q ss_conf 338999888998389970899777--87479-73037850356768999991499989995158------8987579999
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDES--PWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTVQKW 1300 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~--iWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgs~d------~~~DgtVrIW 1300 (1620)
+++++++. ..+...+..+++.. +||.. +..+.++.++..+ .++|+|||+.++.++.. ++.|++|++|
T Consensus 26 a~~~~~~~--~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~ 101 (368)
T d1mdah_ 26 GPGAISRR--SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVF 101 (368)
T ss_dssp CCCCCTTE--EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEE
T ss_pred CCCCCCCC--EEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCC--CCEECCCCCEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf 55898761--26972045788621799708998377888578777--513989998899975567640103567869999
Q ss_pred ECCCCEEEEEEECCCC-------CEEEEEEEECCCEEE-E-E-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 5899849999714776-------556999930899089-9-2-7929999699992579970368764344689988421
Q 000355 1301 ELTRINCVSGYYGHEE-------VVNDICVLSSSGRIA-S-C-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1301 dl~tg~~i~~l~gH~~-------~V~sIafs~~~~~La-S-~-DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
|..+++.+..+..+.. ....++|+++++++. + . ++++.+||+.+++....+..+.....
T Consensus 102 D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----------- 170 (368)
T d1mdah_ 102 DPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----------- 170 (368)
T ss_dssp CTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC-----------
T ss_pred ECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE-----------
T ss_conf 899993830643785421024688640588789989999968998599998998938678604675237-----------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
Q ss_conf 22465321124677888489743498217987724998999997799099998789924688608996545687510576
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1450 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva 1450 (1620)
.......+++.+.||++..|+......................+..+.
T Consensus 171 --------------------------------~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (368)
T d1mdah_ 171 --------------------------------HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ 218 (368)
T ss_dssp --------------------------------EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE
T ss_pred --------------------------------CCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECC
T ss_conf --------------------------------469982399994899889998268962666530311135666466010
Q ss_pred EECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE--CCC----------CCEEEEE-ECCCCEEEEEECC-
Q ss_conf 5089763357656799889999059909999789994899997--137----------7578998-1799999999589-
Q 000355 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--AHD----------GYVTKLA-APEDHLLVSSSLD- 1516 (1620)
Q Consensus 1451 ~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~--~H~----------~~V~sVa-spdg~~LvSgS~D- 1516 (1620)
+. +++..+ ...++.+.+++...+....... .+. .....++ ++++..++....+
T Consensus 219 ~~-----------~~g~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~ 285 (368)
T d1mdah_ 219 AN-----------YPGMLV--WAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp ET-----------TTTEEE--ECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred CC-----------CCCEEE--EECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCC
T ss_conf 15-----------586899--93489779996069936997602465430455401278835688717998799983589
Q ss_pred --------CCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCC-E-EEEEECCC-EEEEECC
Q ss_conf --------949999789999998848406999879--9964199-9-99994993-6998266
Q 000355 1517 --------KTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQ-D-VISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1517 --------gtI~iWDl~~~~~~~~~~l~gH~~~V~--afSpdg~-~-LaSgS~Dg-I~vwdl~ 1566 (1620)
..|.+||..++ +.+..+... ..+. +|+|||+ + ++++..|+ |.+||..
T Consensus 286 ~~~~~~~~~~v~v~D~~t~--~~~~~~~~~-~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~ 345 (368)
T d1mdah_ 286 SRSCLAAAENTSSVTASVG--QTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp SSCTTSCEEEEEEEESSSC--CEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred CCEEECCCCEEEEEECCCC--CEEEEECCC-CCEEEEEECCCCCEEEEEEECCCCEEEEEECC
T ss_conf 7334058864999989999--486895589-96517999989998999994899969999899
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.61 E-value=8.7e-16 Score=119.90 Aligned_cols=316 Identities=10% Similarity=0.012 Sum_probs=184.9
Q ss_pred CCCCCCCEEEEECCCCCEEEEECC-CCEEEEEE------------------------------CCCCCEEEEEECCCCCE
Q ss_conf 988899838997089977787479-73037850------------------------------35676899999149998
Q 000355 1235 ASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR------------------------------AHHGALRSVAVGQDECT 1283 (1620)
Q Consensus 1235 g~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~------------------------------gH~~~V~svafspdg~~ 1283 (1620)
|.+|+...+.|++.+|.+++|++. +..++++. .|.-......++|||++
T Consensus 6 G~~De~y~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~ 85 (441)
T d1qnia2 6 GELDEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKY 85 (441)
T ss_dssp TCCCSEEEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCE
T ss_conf 87787799996887774899967898079999767578987999888650478313322567556777221032688888
Q ss_pred EEEECCCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEEEECCCEE--E-EECCCEE------------------EEE
Q ss_conf 99951588987579999589984999971-477655699993089908--9-9279299------------------996
Q 000355 1284 VFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--A-SCDGTLH------------------VWN 1341 (1620)
Q Consensus 1284 LaSgs~d~~~DgtVrIWdl~tg~~i~~l~-gH~~~V~sIafs~~~~~L--a-S~DgtI~------------------IWD 1341 (1620)
++..... +++|.+||+.++++...+. .+...+..++|++++... + ..+..+. .+|
T Consensus 86 lfV~d~~---~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD 162 (441)
T d1qnia2 86 LFINDKA---NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAID 162 (441)
T ss_dssp EEEEETT---TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEE
T ss_pred EEEECCC---CCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 9997389---9979999887784755795678878643487056998999956677544367663001455532388663
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC-CEE
Q ss_conf 9999257997036876434468998842122465321124677888489743498217987724998999997799-099
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLR 1420 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~Dg-tIr 1420 (1620)
..+.+....+. ..+ ....+.++++|+++++.+.+. .+.
T Consensus 163 ~~t~~v~~qI~----------------------------------------v~~-~p~~v~~spdGk~a~vt~~nse~~~ 201 (441)
T d1qnia2 163 AETMDVAWQVI----------------------------------------VDG-NLDNTDADYTGKYATSTCYNSERAV 201 (441)
T ss_dssp TTTCSEEEEEE----------------------------------------ESS-CCCCEEECSSSSEEEEEESCTTCCS
T ss_pred CCCCEEEEEEE----------------------------------------CCC-CCCCEEECCCCCEEEEEECCCCCEE
T ss_conf 75560647873----------------------------------------699-8654698799998999851787318
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 99878992468860899654568751057650897633576567998899990599099997899948999971377578
Q 000355 1421 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1500 (1620)
Q Consensus 1421 iWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~ 1500 (1620)
.++..+.+....... ..+...+++ .++|+++..+ .++.+.+++....+.+..+.....+ .
T Consensus 202 ~id~~t~~~~d~i~v-------~n~p~~~~~-----------~~dGk~~~v~-~~~v~vvd~~~~~~v~~~IPvgksP-h 261 (441)
T d1qnia2 202 DLAGTMRNDRDWVVV-------FNVERIAAA-----------VKAGNFKTIG-DSKVPVVDGRGESEFTRYIPVPKNP-H 261 (441)
T ss_dssp SHHHHTCSSBCEEEE-------EEHHHHHHH-----------HHTTCCBCCT-TCCCCEEECSSSCSSEEEECCBSSC-C
T ss_pred EEECCCCCEEEEEEE-------CCCCCEEEE-----------ECCCCEEEEC-CCCCEEEECCCCCCEEEEEECCCCC-C
T ss_conf 985157121789996-------885110799-----------6699999969-9982899803687068997179886-6
Q ss_pred EEE-ECCCCEEE-EEECCCCEEEEECCCCC------CCCCEEEECCCC----CEE-EEEECCCEEEEEECCC-EEEEECC
Q ss_conf 998-17999999-99589949999789999------998848406999----879-9964199999994993-6998266
Q 000355 1501 KLA-APEDHLLV-SSSLDKTLRIWDLRRNW------PSQPTVFKGHTN----GIS-GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1501 sVa-spdg~~Lv-SgS~DgtI~iWDl~~~~------~~~~~~l~gH~~----~V~-afSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
.++ +|||++++ ++..+++|.+||+.+.. ......+.++.. +.+ +|+++|..+.|..-|. |..|++.
T Consensus 262 Gv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 262 GLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred CCEECCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCEEEECCCCCCEEEEECCC
T ss_conf 72689998789990775993899983224457525688424799601455476652265785599852443168972354
Q ss_pred CCCC-CCCCC-EEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEE---ECCCC
Q ss_conf 7889-89950-00011001211798754648999992499899999---18994
Q 000355 1567 KSAD-EDGQH-RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG---TEDGY 1615 (1620)
Q Consensus 1567 ~~~~-~~g~~-~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg---s~DG~ 1615 (1620)
.... ..+.. .....++ .+.-..+|...+.+.+++|||+.|+++ +.|..
T Consensus 342 ~~~~~~~~~~~~~v~~~~-~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~ 394 (441)
T d1qnia2 342 DAIKHYNGDRVNYIRQKL-DVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF 394 (441)
T ss_dssp HHHHHHTTCCCCCEEEEE-ECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred HHHHHHCCCCCCEEEECC-CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 221332267776568645-32668987752454223898848996574442557
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.61 E-value=4.2e-13 Score=101.34 Aligned_cols=110 Identities=5% Similarity=-0.056 Sum_probs=58.0
Q ss_pred EECCCCCCCCCCCCEEEEEC----------CCCCEEEEECC-CCEEEEEECCCCC-------EEEEEECCCCCEEEEECC
Q ss_conf 56338999888998389970----------89977787479-7303785035676-------899999149998999515
Q 000355 1228 FWFPTPAASWDGPDFLGRVG----------GLKDESPWKIK-ASILSSIRAHHGA-------LRSVAVGQDECTVFTAGI 1289 (1620)
Q Consensus 1228 v~~~S~dg~~~~~~~las~s----------~D~~i~iWd~~-~~~l~tl~gH~~~-------V~svafspdg~~LaSgs~ 1289 (1620)
.-+|||||++ ++.++ .|+.+.+||.. ++.+..+..|... ...++|+|||++++.+..
T Consensus 69 ~~a~spDg~~-----i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~ 143 (368)
T d1mdah_ 69 LAVAGHSGSD-----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEECTTSSC-----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred CCEECCCCCE-----EEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEEC
T ss_conf 5139899988-----99975567640103567869999899993830643785421024688640588789989999968
Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE-EEECCCEEEEECCCCCE
Q ss_conf 88987579999589984999971477655699993089908-99279299996999925
Q 000355 1290 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKL 1347 (1620)
Q Consensus 1290 d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L-aS~DgtI~IWD~~tg~~ 1347 (1620)
+ ++++.+||+.+++....+..+...... .......+ .+.||++.+|+...+..
T Consensus 144 ~---~~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~Dg~~~~~~~~~~~~ 197 (368)
T d1mdah_ 144 G---SSAAAGLSVPGASDDQLTKSASCFHIH--PGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp S---SSCEEEEEETTTEEEEEEECSSCCCCE--EEETTEEECCCCTTSCEEEECCSSCC
T ss_pred C---CCEEEEEECCCCCEEEEEECCCCCEEC--CCCCCEEEEECCCCCEEEEEECCCCE
T ss_conf 9---985999989989386786046752374--69982399994899889998268962
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.49 E-value=1.5e-11 Score=90.63 Aligned_cols=114 Identities=4% Similarity=-0.118 Sum_probs=84.9
Q ss_pred CCCCCCCCCEEC--CCCCCCCCCCCEEEEECC---------CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 234569992563--389998889983899708---------997778747973037850356768999991499989995
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGG---------LKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTA 1287 (1620)
Q Consensus 1219 ~~~~~H~~~v~~--~S~dg~~~~~~~las~s~---------D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSg 1287 (1620)
.++.+|..+|.+ |||||++ |+.++. ++++.+||+++..+..+.+|.+.+..+.|||||+.+|..
T Consensus 55 ~~~~~~~~~i~~~~~SpDg~~-----i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~ 129 (470)
T d2bgra1 55 STFDEFGHSINDYSISPDGQF-----ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV 129 (470)
T ss_dssp TTTTTSSSCCCEEEECTTSSE-----EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE
T ss_pred HHHHHCCCCCCEEEECCCCCE-----EEEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 564431676540599898897-----999977710001046734999989888513124687423101014676413575
Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEECC------------------CCCEEEEEEEECCCEEEEE--C-CCEEEEEC
Q ss_conf 158898757999958998499997147------------------7655699993089908992--7-92999969
Q 000355 1288 GIGPGFKGTVQKWELTRINCVSGYYGH------------------EEVVNDICVLSSSGRIASC--D-GTLHVWNS 1342 (1620)
Q Consensus 1288 s~d~~~DgtVrIWdl~tg~~i~~l~gH------------------~~~V~sIafs~~~~~LaS~--D-gtI~IWD~ 1342 (1620)
. |+.+.+|+..+++..+....+ .+....+.|+|++.+++.. | ..+..|+.
T Consensus 130 ~-----~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 130 W-----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp E-----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred E-----CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCEEEE
T ss_conf 1-----4641379889994653210147774053543201121004776530799998722026863776706998
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.21 E-value=1.8e-10 Score=83.18 Aligned_cols=271 Identities=6% Similarity=-0.047 Sum_probs=153.0
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCEEEEECCCCCEEEEECC-CCEEEEEE-CCCCCEEEEEECCCCC--EEEEECCCC---
Q ss_conf 4569992563--3899988899838997089977787479-73037850-3567689999914999--899951588---
Q 000355 1221 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR-AHHGALRSVAVGQDEC--TVFTAGIGP--- 1291 (1620)
Q Consensus 1221 ~~~H~~~v~~--~S~dg~~~~~~~las~s~D~~i~iWd~~-~~~l~tl~-gH~~~V~svafspdg~--~LaSgs~d~--- 1291 (1620)
...|.+.+.. ++|||+| +++....+.++.+||++ +++.+.++ .+......++|+++++ +++..+.+.
T Consensus 67 gd~hhP~~s~t~gtpDGr~----lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~ 142 (441)
T d1qnia2 67 GDCHHPHISMTDGRYDGKY----LFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQ 142 (441)
T ss_dssp CCBCCCEEEEETTEEEEEE----EEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEES
T ss_pred CCCCCCCCCEECCCCCCCE----EEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCC
T ss_conf 7556777221032688888----999738999799998877847557956788786434870569989999566775443
Q ss_pred ----------CCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEE-EEE-C-CCEEEEECCCCCEEEEEECCCCCC
Q ss_conf ----------987579999589984999971477655699993089908-992-7-929999699992579970368764
Q 000355 1292 ----------GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC-D-GTLHVWNSQTGKLLSVFAEQSMDS 1358 (1620)
Q Consensus 1292 ----------~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~L-aS~-D-gtI~IWD~~tg~~i~~l~~~~~~~ 1358 (1620)
.....+..+|..+.+....... .+....+.|+++++++ +++ + ..+..++..+.+....+.....
T Consensus 143 ~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~-- 219 (441)
T d1qnia2 143 PNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV-- 219 (441)
T ss_dssp SCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEH--
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC-CCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCC--
T ss_conf 67663001455532388663755606478736-998654698799998999851787318985157121789996885--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCC
Q ss_conf 34468998842122465321124677888489743498217987724998999997799099998789924688608996
Q 000355 1359 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1438 (1620)
Q Consensus 1359 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~ 1438 (1620)
-..+.+.++|+++.. +.++.+.+++....+.+..+.....
T Consensus 220 ---------------------------------------p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~~v~~~IPvgks 259 (441)
T d1qnia2 220 ---------------------------------------ERIAAAVKAGNFKTI-GDSKVPVVDGRGESEFTRYIPVPKN 259 (441)
T ss_dssp ---------------------------------------HHHHHHHHTTCCBCC-TTCCCCEEECSSSCSSEEEECCBSS
T ss_pred ---------------------------------------CCEEEEECCCCEEEE-CCCCCEEEECCCCCCEEEEEECCCC
T ss_conf ---------------------------------------110799669999996-9998289980368706899717988
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCEE-EEEECCCCEEEEECCCCCE--------EEEEECCCC---CEEEEE-EC
Q ss_conf 5456875105765089763357656799889-9990599099997899948--------999971377---578998-17
Q 000355 1439 ELGFPSLVSAICACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSGNV--------IASWRAHDG---YVTKLA-AP 1505 (1620)
Q Consensus 1439 ~i~~~~~V~sva~~~~~~~s~~g~~~~g~~L-asGs~Dg~I~iwD~~tg~~--------i~~l~~H~~---~V~sVa-sp 1505 (1620)
...+.++ |+|+++ ++|..+++|.+||+.+... ...+.++.. .....+ .+
T Consensus 260 -------PhGv~vS-----------PDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~ 321 (441)
T d1qnia2 260 -------PHGLNTS-----------PDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDG 321 (441)
T ss_dssp -------CCCEEEC-----------TTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECS
T ss_pred -------CCCCEEC-----------CCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECC
T ss_conf -------6672689-----------9987899907759938999832244575256884247996014554766522657
Q ss_pred CCCEEEEEECCCCEEEEECCC------CC-CCC-CEEE-----ECCCCCEE--EEEECCCEEEEEE
Q ss_conf 999999995899499997899------99-998-8484-----06999879--9964199999994
Q 000355 1506 EDHLLVSSSLDKTLRIWDLRR------NW-PSQ-PTVF-----KGHTNGIS--GFSVWGQDVISIS 1556 (1620)
Q Consensus 1506 dg~~LvSgS~DgtI~iWDl~~------~~-~~~-~~~l-----~gH~~~V~--afSpdg~~LaSgS 1556 (1620)
+|..+.|.+.|..|..|++.. +. ... ...+ .||...+. +++|||++|++++
T Consensus 322 ~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 322 RGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred CCEEEECCCCCCEEEEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 855998524431689723542213322677765686453266898775245422389884899657
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.1e-11 Score=91.58 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=62.0
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-99999998966675---3199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||+++||++ |.+||.+.+..... ........++..|+++.+||.+||..||.+|||+.|++++
T Consensus 185 ~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 988745244424789999826999988899999999998189998987779999999999768797689299999999
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=1.3e-11 Score=90.98 Aligned_cols=76 Identities=22% Similarity=0.344 Sum_probs=61.8
Q ss_pred CCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH---HCC
Q ss_conf 9963528999999999990-99999998966675---3199998687999999999998241389999998888---449
Q 000355 678 KDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSL---LES 750 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~---L~h 750 (1620)
++.++||||+||+++||++ |++||.+.+..... ..+..+..+...|+++.+||.+||..||.+|||++++ |+|
T Consensus 187 ~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHC
T ss_conf 98434430340313289658999999989999999998289999986567999999999758897689098999998528
Q ss_pred CCC
Q ss_conf 999
Q 000355 751 PYF 753 (1620)
Q Consensus 751 p~f 753 (1620)
+|+
T Consensus 267 ~~~ 269 (277)
T d1xbba_ 267 YYY 269 (277)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 875
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.16 E-value=7.6e-12 Score=92.69 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=58.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----CCC--CCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990999999989666753----199--998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE----NGD--LPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g~p~F~g~~~~~~~~----~~~--~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||++|||++|++||.+.+...... ... .....+.+|+++.+||.+||+.||.+||++.+.|.|
T Consensus 190 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~ 269 (277)
T d1o6ya_ 190 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 269 (277)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHH
T ss_conf 99966320265289999976979989969999999998469999710034789999999999866797677739999999
Q ss_pred CCC
Q ss_conf 999
Q 000355 751 PYF 753 (1620)
Q Consensus 751 p~f 753 (1620)
+|.
T Consensus 270 ~l~ 272 (277)
T d1o6ya_ 270 DLV 272 (277)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.14 E-value=6.2e-11 Score=86.41 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=60.9
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-99999998966675---3199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||+++||++ |++||.+.+..... ........+...++.+.+|+.+||..||.+|||+.|+++.
T Consensus 209 ~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 209 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 978612144535789999867999999999999999997378899974226999999999758797689299999999
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=1.8e-11 Score=90.11 Aligned_cols=76 Identities=18% Similarity=0.339 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH---HCC
Q ss_conf 9963528999999999990-9999999896667---53199998687999999999998241389999998888---449
Q 000355 678 KDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSL---LES 750 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~---~~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~---L~h 750 (1620)
.+.++||||+||+++||++ |++||.+.+..+. +..+..+..++..|+++.+||.+||..||.+|||+.++ |+|
T Consensus 189 ~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 189 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 99541232201789999938999999979999999998189999997678999999999757797689099999999999
Q ss_pred CCC
Q ss_conf 999
Q 000355 751 PYF 753 (1620)
Q Consensus 751 p~f 753 (1620)
+|+
T Consensus 269 ~~~ 271 (285)
T d1u59a_ 269 CYY 271 (285)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=4.5e-11 Score=87.39 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=61.3
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHHH---CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-999999989666753---199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYLE---NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~~---~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||+++||++ |++||.+.+...... .......+...++++.+||.+||+.||.+|||+.++|+|
T Consensus 177 ~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 988521033643246739755999988999999999998079789965465999999999766897689399999987
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=4.2e-11 Score=87.60 Aligned_cols=74 Identities=26% Similarity=0.296 Sum_probs=61.5
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-99999998966675---3199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
..+.++||||+||+++||++ |++||.+.+..+.. .....+.+++..++++++||.+||..||.+|||+.+++++
T Consensus 176 ~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 888588777579999999978999999999999999998089999976579999999999756697689399999999
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=8.3e-11 Score=85.54 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=61.1
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 89963528999999999990-99999998966675---319999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
.++.++||||+||+++||++ |.+||.+.+..... ..+..+..+...++++.+||.+||+.||.+|||+.|+|+
T Consensus 213 ~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 213 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 88825554775888887401798989999999999999728888987435299999999976679767939999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=6.2e-11 Score=86.41 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=61.7
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-9999999896667---53199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~---~~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||+++||++ |++||.+.+.... +..+..+..++..++++.+|+.+||..||.+|||+.|+++|
T Consensus 189 ~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 189 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 998356544079999999977999999999899999997599899985568999999998478993469199999999
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=6.4e-11 Score=86.30 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=59.4
Q ss_pred CCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHHH----CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 9963528999999999990-999999989666753----19999868799999999999824138999999888844
Q 000355 678 KDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYLE----NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~~----~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
.+.++||||+||+++||++ |++||.+.+...... ....+..++.+++++.+||.+||..||.+|||+.|+++
T Consensus 191 ~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 99421566148999999968999999969999999998479999985445399999999976889667929999999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1e-10 Score=84.87 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=61.0
Q ss_pred CCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 99635289999999999909-9999998966675---3199998687999999999998241389999998888449
Q 000355 678 KDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~g-~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
++.++||||+||+++||++| .|||.+.+..... ..+..+..+...++++++||.+||..||++|||++|+|++
T Consensus 203 ~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 203 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99622153138899999836899999999999999998268888876678999999999767896689499999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=1e-10 Score=84.90 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=59.9
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 89963528999999999990-99999998966675---3199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
.++.++||||+||+++||++ |+|+|.+.+..... ........+...++++.+|+.+||+.||.+|||++|+|+|
T Consensus 178 ~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 998403321059999999878988877899999999998068889954367999999999765797689199999999
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=5.7e-11 Score=86.64 Aligned_cols=77 Identities=21% Similarity=0.291 Sum_probs=61.5
Q ss_pred CCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC--CC
Q ss_conf 9963528999999999990-99999998966675---319999868799999999999824138999999888844--99
Q 000355 678 KDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE--SP 751 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~--hp 751 (1620)
++.++||||+||+++||++ |+|+|.+.+..... .....+..+...++++.+|+.+||+.||.+|||++|+++ ++
T Consensus 187 ~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~ 266 (272)
T d1qpca_ 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (272)
T ss_dssp ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 98245645257999999968988888889999999997068888965571999999999758897689399999998611
Q ss_pred CCC
Q ss_conf 999
Q 000355 752 YFP 754 (1620)
Q Consensus 752 ~f~ 754 (1620)
||.
T Consensus 267 ~ft 269 (272)
T d1qpca_ 267 FFT 269 (272)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 321
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.06 E-value=1.5e-10 Score=83.66 Aligned_cols=73 Identities=19% Similarity=0.259 Sum_probs=60.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 899635289999999999909-9999998966675---319999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g-~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
.++.++||||+||+++||+++ .|||.+.+..... .....+..+...++++.+||.+||+.||.+|||+.|+++
T Consensus 218 ~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 89805630252362999980689999998999999999739978887325299999999974889657939999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=2.1e-10 Score=82.72 Aligned_cols=73 Identities=19% Similarity=0.301 Sum_probs=58.8
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHH----HHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 89963528999999999990-999999989666----75319999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAV----YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~-g~p~F~g~~~~~----~~~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
..+.++||||+||+++||++ |.|+|.+.+... ....+..+..+...++++.+||.+||+.||.+|||++|+|+
T Consensus 223 ~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999740010258999999858998877899899999998668988985436599999999975779657929999999
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=1.9e-10 Score=82.99 Aligned_cols=73 Identities=22% Similarity=0.259 Sum_probs=58.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 899635289999999999909-9999998966675---319999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g-~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
.++.++||||+||+++||+++ .|+|.+.+..... .....+..+...++++++|+.+||+.||.+|||++|+++
T Consensus 192 ~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 99810430217899999986799887742599999998558888887433099999999975779768939999999
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=3.3e-10 Score=81.42 Aligned_cols=73 Identities=21% Similarity=0.269 Sum_probs=61.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHHH---CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 899635289999999999909-99999989666753---19999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYLE---NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g-~p~F~g~~~~~~~~---~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
..+.++||||+||+++||+++ ++||.+.+...... ....+..++..++.+.++|.+||+.||.+|||+.|+++
T Consensus 211 ~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 211 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 98833344437899999996899999998999999999808888886335399999999975779658939999999
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=9.3e-10 Score=78.28 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=57.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 899635289999999999909-9999998966675---319999868799999999999824138999999888844
Q 000355 677 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 749 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g-~p~F~g~~~~~~~---~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~ 749 (1620)
..+.++||||+||+++||+++ .|+|.+.+..... ..+..+..+...+..+.+|+.+||..||.+|||+.|+++
T Consensus 189 ~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 189 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 99973556344898999996798865568999999998635789985045799999999977679768939999999
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=3.4e-10 Score=81.32 Aligned_cols=74 Identities=26% Similarity=0.262 Sum_probs=57.5
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCC-CCCCH---HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 8996352899999999999099999-99896---66753199998687999999999998241389999998888449
Q 000355 677 SKDCSKDIFSIGCLLAELHLRRPLF-DSISL---AVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g~p~F-~g~~~---~~~~~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e~L~h 750 (1620)
..+.+.||||+||+++||++|..|| .+.+. ...+..+..+..++..++++.+|+.+||..||.+|||+.|+++|
T Consensus 210 ~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999745746619999999978999988899999999998089889964475999999999768897689399999999
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.86 E-value=6.8e-10 Score=79.21 Aligned_cols=77 Identities=14% Similarity=0.246 Sum_probs=58.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH----------HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 8996352899999999999099999998966675----------319999868799999999999824138999999888
Q 000355 677 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----------ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKS 746 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g~p~F~g~~~~~~~----------~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e 746 (1620)
..+.++||||+||+++||++|++||.+....... .....+...+.+|+++.+|+.+|+..||.+||++.+
T Consensus 189 ~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~ 268 (299)
T d1ckia_ 189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY 268 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHH
T ss_pred CCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf 98983218861778999984987665530577999999852356789835753478899999999984399557919999
Q ss_pred ---HHCCCCC
Q ss_conf ---8449999
Q 000355 747 ---LLESPYF 753 (1620)
Q Consensus 747 ---~L~hp~f 753 (1620)
+|+|+|.
T Consensus 269 i~~~l~~~~~ 278 (299)
T d1ckia_ 269 LRQLFRNLFH 278 (299)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.67 E-value=1e-05 Score=50.47 Aligned_cols=279 Identities=5% Similarity=-0.072 Sum_probs=137.5
Q ss_pred EEEECCCCCEEEEE--CCCCEE---EE-EECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCC-CEEEEE-EECC
Q ss_conf 89970899777874--797303---78-5035676899999149998999515889875799995899-849999-7147
Q 000355 1243 LGRVGGLKDESPWK--IKASIL---SS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCVSG-YYGH 1314 (1620)
Q Consensus 1243 las~s~D~~i~iWd--~~~~~l---~t-l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~t-g~~i~~-l~gH 1314 (1620)
+++-+.++.+.... .+...+ .. .......+.-++|+++++.++++.. +.+..|.+.. +..... -...
T Consensus 7 vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 81 (365)
T d1jofa_ 7 IGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-----KKWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-----TEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEEC-----CCEEEEEEECCCCEEEEEEECC
T ss_conf 99314999899999858889389845445168999777999489899999938-----9478999908997698764128
Q ss_pred CCCEEEEEEEECCCE--EEEE---CCCEEEEECC-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 765569999308990--8992---7929999699-992579970368764344689988421224653211246778884
Q 000355 1315 EEVVNDICVLSSSGR--IASC---DGTLHVWNSQ-TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1388 (1620)
Q Consensus 1315 ~~~V~sIafs~~~~~--LaS~---DgtI~IWD~~-tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1388 (1620)
......+++++++.. +++. .++|..+... .+.....+...... .+.+.+
T Consensus 82 ~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 136 (365)
T d1jofa_ 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG-------------------------KLEKNV 136 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC-------------------------CEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECC-------------------------EECCCC
T ss_conf 9986789987899879999932799789986745788742068664033-------------------------004764
Q ss_pred EEEEE-CCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCC-CEEEE--EECCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 89743-4982179877249989999977-990999987899-24688--6089965456875105765089763357656
Q 000355 1389 LSTAF-DGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQG-QKLHL--WRGEPTELGFPSLVSAICACGSEKMQAGGAV 1463 (1620)
Q Consensus 1389 ~sv~f-~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~tg-~~i~~--l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~ 1463 (1620)
..... ......++.++|+|++++++.. ...|.+|+.... ..... .... ......+.++|+
T Consensus 137 ~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~----~~g~gPr~i~f~----------- 201 (365)
T d1jofa_ 137 QNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP----DPGDHPRWVAMH----------- 201 (365)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS----STTCCEEEEEEC-----------
T ss_pred CCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEECCCEEEC----CCCCCEEEEEEC-----------
T ss_conf 67556889811597888999989982079987999970688716652511112----788740899988-----------
Q ss_pred CCCCEE-EEEECCCCEEEEECCCCCE--EEEEEC-----------------CCCCEEEEE-ECCCCEEEEEEC-CC----
Q ss_conf 799889-9990599099997899948--999971-----------------377578998-179999999958-99----
Q 000355 1464 ASPSWI-AAGLSSGQCRLFDVRSGNV--IASWRA-----------------HDGYVTKLA-APEDHLLVSSSL-DK---- 1517 (1620)
Q Consensus 1464 ~~g~~L-asGs~Dg~I~iwD~~tg~~--i~~l~~-----------------H~~~V~sVa-spdg~~LvSgS~-Dg---- 1517 (1620)
|+++++ ++...+++|.+||...++. +..... +......+. +|+|++|+++.. +.
T Consensus 202 pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~ 281 (365)
T d1jofa_ 202 PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ 281 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred CCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC
T ss_conf 99866999515899899999559875377873124024556556665444435776316998999978997135787542
Q ss_pred -CEEEEECCCCCCCCCE-EEE---CCCCCE--EEEEE-CCCEEEEEE-CCC-EEEEECC
Q ss_conf -4999978999999884-840---699987--99964-199999994-993-6998266
Q 000355 1518 -TLRIWDLRRNWPSQPT-VFK---GHTNGI--SGFSV-WGQDVISIS-NNK-IGLSSLS 1566 (1620)
Q Consensus 1518 -tI~iWDl~~~~~~~~~-~l~---gH~~~V--~afSp-dg~~LaSgS-~Dg-I~vwdl~ 1566 (1620)
.|..|++......... .+. ...... .+++| +|++|+.+. .++ |.+|+++
T Consensus 282 ~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEE
T ss_conf 27999985688714467676677767998647896489999999996799949999982
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=1.1e-05 Score=50.18 Aligned_cols=103 Identities=12% Similarity=0.016 Sum_probs=49.0
Q ss_pred ECCCCCCCCCCCCEEEEE---------CCCCCEEEEECCCCEEEEEE---CCCCCEEEEEECCCCCEEEEECCCCCCCCE
Q ss_conf 633899988899838997---------08997778747973037850---356768999991499989995158898757
Q 000355 1229 WFPTPAASWDGPDFLGRV---------GGLKDESPWKIKASILSSIR---AHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1229 ~~~S~dg~~~~~~~las~---------s~D~~i~iWd~~~~~l~tl~---gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
+.+|||+++ ++.+ +..+...++|+.......+. +..+.+....|||||+.+|-.. ++.
T Consensus 66 ~~~SpD~~~-----vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-----~~n 135 (465)
T d1xfda1 66 YEISPDREY-----ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-----ENN 135 (465)
T ss_dssp EEECTTSSE-----EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-----TTE
T ss_pred EEECCCCCE-----EEEEECCCCEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE-----CCE
T ss_conf 389898886-----9999845100476033528999856884564157667764311002426785699996-----132
Q ss_pred EEEEECCCCEEEEEEE-CCCCCE-----------------EEEEEEECCCEEEEE---CCCEEEEE
Q ss_conf 9999589984999971-477655-----------------699993089908992---79299996
Q 000355 1297 VQKWELTRINCVSGYY-GHEEVV-----------------NDICVLSSSGRIASC---DGTLHVWN 1341 (1620)
Q Consensus 1297 VrIWdl~tg~~i~~l~-gH~~~V-----------------~sIafs~~~~~LaS~---DgtI~IWD 1341 (1620)
+.+.+..++...+... |..+.| .++-|+|++.+|+-. |..|..+.
T Consensus 136 l~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~ 201 (465)
T d1xfda1 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (465)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred EEEEECCCCCEEEEECCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEE
T ss_conf 999954899658971126766044366431001230366434897798986899995366661464
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.65 E-value=1.1e-05 Score=50.17 Aligned_cols=66 Identities=17% Similarity=0.079 Sum_probs=31.8
Q ss_pred CEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEEC
Q ss_conf 689999914999899951588987579999589984999971477655699993089908992--792999969
Q 000355 1271 ALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNS 1342 (1620)
Q Consensus 1271 ~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~ 1342 (1620)
.+..+++++||+++++... +++|..|+... +. ..+......+.+++|.+++..+++. ++.+..|+.
T Consensus 29 ~~e~iAv~pdG~l~vt~~~----~~~I~~i~p~g-~~-~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~ 96 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHE----VGEIVSITPDG-NQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL 96 (302)
T ss_dssp CEEEEEECTTSCEEEEETT----TTEEEEECTTC-CE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCCCEEECCCCCEEEEECC----CCEEEEEECCC-CE-EEEECCCCCCCEEEECCCCCEEEEECCCCEEEEEEE
T ss_conf 8478779999889999688----99899990899-88-999717998536898677886998328953788871
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.65 E-value=1.1e-05 Score=50.08 Aligned_cols=110 Identities=10% Similarity=0.014 Sum_probs=74.8
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCC--CEE
Q ss_conf 338999888998389970899777874797303785035676899999149998999515889875799995899--849
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR--INC 1307 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~t--g~~ 1307 (1620)
++++||.. +++...+++|..|+..+. ...+....+.+.+++|++||..+++... ++.+.+|+... +..
T Consensus 34 Av~pdG~l-----~vt~~~~~~I~~i~p~g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~----~~~~~~~~~~~~~~~~ 103 (302)
T d2p4oa1 34 ASAPDGTI-----FVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWN----ADSIPVVSLVKSDGTV 103 (302)
T ss_dssp EECTTSCE-----EEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEEC----TTSCEEEEEECTTSCE
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCC-EEEEECCCCCCCEEEECCCCCEEEEECC----CCEEEEEEECCCCCCE
T ss_conf 79999889-----999688998999908998-8999717998536898677886998328----9537888710111101
Q ss_pred EEEE-ECCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEE
Q ss_conf 9997-1477655699993089908992--7929999699992579
Q 000355 1308 VSGY-YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLS 1349 (1620)
Q Consensus 1308 i~~l-~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~ 1349 (1620)
.... .......+.+++.+++..+++. ++.+..+|..++....
T Consensus 104 ~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~ 148 (302)
T d2p4oa1 104 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 148 (302)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCCCCCEE
T ss_conf 210235786322166771579787503565541024216873036
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.64 E-value=1.2e-05 Score=49.97 Aligned_cols=229 Identities=10% Similarity=-0.067 Sum_probs=102.5
Q ss_pred EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEE
Q ss_conf 89999914999899951588987579999589984999971477655699993089908992--7929999699992579
Q 000355 1272 LRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLS 1349 (1620)
Q Consensus 1272 V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~ 1349 (1620)
=..+++.++|...++.... .+.+..++..+........+-......+++.+++...++. .+.+++++..++..+.
T Consensus 16 P~~vavd~dG~i~v~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~ 92 (260)
T d1rwia_ 16 PSGVAVDSAGNVYVTSEGM---YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 92 (260)
T ss_dssp EEEEEECTTCCEEEEECSS---SCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CCEEEECCCCCEEEEECCC---CCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEECEEEEEEECCCEEEE
T ss_conf 7889996999999997189---9889999389966897436986684089993899889863100003554211200000
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 97036876434468998842122465321124677888489743498217987724998999997799099998789924
Q 000355 1350 VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQK 1429 (1620)
Q Consensus 1350 ~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~ 1429 (1620)
.... .....++++.++++.+++-..+..+..++......
T Consensus 93 ~~~~-----------------------------------------~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~ 131 (260)
T d1rwia_ 93 PFDG-----------------------------------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 131 (260)
T ss_dssp CCCS-----------------------------------------CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC
T ss_pred EEEE-----------------------------------------EEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEE
T ss_conf 0100-----------------------------------------00000002455320575033555321123222201
Q ss_pred EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCC
Q ss_conf 68860899654568751057650897633576567998899990599099997899948999971377578998-17999
Q 000355 1430 LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH 1508 (1620)
Q Consensus 1430 i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~ 1508 (1620)
...... . ......+++. ++++.+++...++.|..+|.............-.....++ .++|+
T Consensus 132 -~~~~~~-~----~~~p~~i~~~-----------~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~ 194 (260)
T d1rwia_ 132 -TVLPFT-G----LNDPDGVAVD-----------NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 194 (260)
T ss_dssp -EECCCC-S----CCSCCEEEEC-----------TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC
T ss_pred -EEEEEC-C----CCCCCEEEEC-----------CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEE
T ss_conf -223203-6----6775205454-----------8998864102564332223431001222101147876312310001
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCEEEEC-CCCCEE--EEEECCCEEEEEECCC-EEEEE
Q ss_conf 99999589949999789999998848406-999879--9964199999994993-69982
Q 000355 1509 LLVSSSLDKTLRIWDLRRNWPSQPTVFKG-HTNGIS--GFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1509 ~LvSgS~DgtI~iWDl~~~~~~~~~~l~g-H~~~V~--afSpdg~~LaSgS~Dg-I~vwd 1564 (1620)
++++....+.|..++..... ...+.. .-.... +++++|.++++-..+. |+.++
T Consensus 195 l~vsd~~~~~i~~~~~~~~~---~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~ 251 (260)
T d1rwia_ 195 VYVTEHNTNQVVKLLAGSTT---STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 251 (260)
T ss_dssp EEEEETTTTEEEEECTTCSC---CEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred EEEEECCCCEEEEEECCCCE---EEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 34321489989999699976---9997069989817999908999999979999899995
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=1e-08 Score=71.12 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=49.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCH---------------HHH---HHCCCC-CCCCC-----CCCHHHHHHHHHC
Q ss_conf 99635289999999999909999999896---------------667---531999-98687-----9999999999982
Q 000355 678 KDCSKDIFSIGCLLAELHLRRPLFDSISL---------------AVY---LENGDL-PGVME-----ELPSHTRILVEAC 733 (1620)
Q Consensus 678 ~~~~vDiWSlGcil~El~~g~p~F~g~~~---------------~~~---~~~~~~-~~~~~-----~~~~~~~dll~~l 733 (1620)
.+.++||||+||+++||++|.+||..... ... ...... +.++. .......+|+.+|
T Consensus 195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~c 274 (303)
T d1vjya_ 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 274 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 67501220159999999628998876631124101225564309999998750246888776557768999999999997
Q ss_pred CCCCCCCCCCHHHHHCC
Q ss_conf 41389999998888449
Q 000355 734 ITKDWTRRPSAKSLLES 750 (1620)
Q Consensus 734 L~~dP~~R~sa~e~L~h 750 (1620)
|+.||.+|||+.|++++
T Consensus 275 l~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 275 WYANGAARLTALRIKKT 291 (303)
T ss_dssp CCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHH
T ss_conf 60698589599999999
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.61 E-value=1.5e-05 Score=49.35 Aligned_cols=106 Identities=7% Similarity=-0.062 Sum_probs=44.2
Q ss_pred EEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf 98772499899999779909999878992468860899654568751057650897633576567998899990599099
Q 000355 1400 CLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCR 1479 (1620)
Q Consensus 1400 ~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~ 1479 (1620)
.+++.++++.+++...++.|..+|....... .+... .......+++. ++|+++++...++.|.
T Consensus 144 ~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~~~~-----~~~~p~gi~~d-----------~~g~l~vsd~~~~~i~ 206 (260)
T d1rwia_ 144 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFT-----DITAPWGIAVD-----------EAGTVYVTEHNTNQVV 206 (260)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCS-----SCCSEEEEEEC-----------TTCCEEEEETTTTEEE
T ss_pred EEEECCCCCEEEECCCCCCCCCCCCCCCEEE-EEECC-----CCCCCCCCEEE-----------EEEEEEEEECCCCEEE
T ss_conf 0545489988641025643322234310012-22101-----14787631231-----------0001343214899899
Q ss_pred EEECCCCCEEEEEE-CCCCCEEEEE-ECCCCEEEEEECCCCEEEEE
Q ss_conf 99789994899997-1377578998-17999999995899499997
Q 000355 1480 LFDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1480 iwD~~tg~~i~~l~-~H~~~V~sVa-spdg~~LvSgS~DgtI~iWD 1523 (1620)
.++...... ..+. ..-.....++ .++|+++++-..++.|+..+
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~ 251 (260)
T d1rwia_ 207 KLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 251 (260)
T ss_dssp EECTTCSCC-EECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred EEECCCCEE-EEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 996999769-997069989817999908999999979999899995
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.53 E-value=2.3e-08 Score=68.73 Aligned_cols=72 Identities=10% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH----------HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 8996352899999999999099999998966675----------319999868799999999999824138999999888
Q 000355 677 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----------ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKS 746 (1620)
Q Consensus 677 ~~~~~vDiWSlGcil~El~~g~p~F~g~~~~~~~----------~~~~~~~~~~~~~~~~~dll~~lL~~dP~~R~sa~e 746 (1620)
..+.++||||+||+++||++|++||.+....... .....+.+.+.+|+++.+++..|+..+|.+||+.+.
T Consensus 189 ~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~ 268 (293)
T d1csna_ 189 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 268 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 88869998983199999986987678853021999999997056799958965799899999999984399300859999
Q ss_pred HH
Q ss_conf 84
Q 000355 747 LL 748 (1620)
Q Consensus 747 ~L 748 (1620)
+.
T Consensus 269 l~ 270 (293)
T d1csna_ 269 LQ 270 (293)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.47 E-value=3.3e-05 Score=46.90 Aligned_cols=13 Identities=0% Similarity=0.130 Sum_probs=6.1
Q ss_pred EEEEEEEECCCEE
Q ss_conf 5699993089908
Q 000355 1318 VNDICVLSSSGRI 1330 (1620)
Q Consensus 1318 V~sIafs~~~~~L 1330 (1620)
++++.|+|+++++
T Consensus 147 ~h~v~~sPdG~~l 159 (365)
T d1jofa_ 147 IHGMVFDPTETYL 159 (365)
T ss_dssp EEEEEECTTSSEE
T ss_pred CEEEEECCCCCEE
T ss_conf 1597888999989
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.45 E-value=3.7e-05 Score=46.52 Aligned_cols=229 Identities=11% Similarity=0.120 Sum_probs=103.8
Q ss_pred EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECC------CCCEEEEEEEECCCE-EEEE---CCCEEEEE
Q ss_conf 8999991499989995158898757999958998499997147------765569999308990-8992---79299996
Q 000355 1272 LRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH------EEVVNDICVLSSSGR-IASC---DGTLHVWN 1341 (1620)
Q Consensus 1272 V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH------~~~V~sIafs~~~~~-LaS~---DgtI~IWD 1341 (1620)
-..++++++++.+++-.. .+.|++||.. |+.+..+... ...-..+++..+... +... ++.|..++
T Consensus 25 P~gvavd~dg~i~VaD~~----n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~ 99 (279)
T d1q7fa_ 25 PSGVAVNAQNDIIVADTN----NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 99 (279)
T ss_dssp EEEEEECTTCCEEEEEGG----GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCEEEECCCCCEEEEECC----CCEEEEEECC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 007999499989999799----8989999699-99999816657886642266300012344552000047753100000
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 99992579970368764344689988421224653211246778884897434982179877249989999977990999
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1421 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIri 1421 (1620)
. .|+....+.... . .....++..+++..+++....+.+.+
T Consensus 100 ~-~g~~~~~~~~~~-----------------------------~----------~~p~~~avd~~G~i~v~~~~~~~~~~ 139 (279)
T d1q7fa_ 100 Q-YGQFVRKFGATI-----------------------------L----------QHPRGVTVDNKGRIIVVECKVMRVII 139 (279)
T ss_dssp T-TSCEEEEECTTT-----------------------------C----------SCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred C-CCCCEEECCCCC-----------------------------C----------CCCCEECCCCCCCEEEEEECCCEEEE
T ss_conf 2-563024038886-----------------------------4----------25420000147847999632632567
Q ss_pred EECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEE--CCCCCE
Q ss_conf 987899246886089965456875105765089763357656799889999059909999789994899997--137757
Q 000355 1422 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--AHDGYV 1499 (1620)
Q Consensus 1422 WDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~--~H~~~V 1499 (1620)
++. +++.+..+.... .......+++. ++++.+++....+.|.+||.. |+.+.++. +.....
T Consensus 140 ~~~-~g~~~~~~g~~~----~~~~~~~i~~d-----------~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P 202 (279)
T d1q7fa_ 140 FDQ-NGNVLHKFGCSK----HLEFPNGVVVN-----------DKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYP 202 (279)
T ss_dssp ECT-TSCEEEEEECTT----TCSSEEEEEEC-----------SSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSE
T ss_pred ECC-CCCEEECCCCCC----CCCCCCEEEEC-----------CCEEEEEEECCCCCEEEEECC-CCEEEEECCCCCCCCC
T ss_conf 626-875010022001----02566243201-----------200178620135510023047-9444530113211487
Q ss_pred EEEE-ECCCCEEEEEEC-CCCEEEEECCCCCCCCCEEEECCC--CCEE--EEEECCCEEEEEECCC-EEEEECC
Q ss_conf 8998-179999999958-994999978999999884840699--9879--9964199999994993-6998266
Q 000355 1500 TKLA-APEDHLLVSSSL-DKTLRIWDLRRNWPSQPTVFKGHT--NGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1500 ~sVa-spdg~~LvSgS~-DgtI~iWDl~~~~~~~~~~l~gH~--~~V~--afSpdg~~LaSgS~Dg-I~vwdl~ 1566 (1620)
..|+ .++|+++++-+. ++.|.+++. ++ ..+.++.... .... ++.++|.++++. .+. |++|...
T Consensus 203 ~giavD~~G~i~Vad~~~~~~v~~f~~-~G--~~~~~~~~~~~~~~p~~vav~~dG~l~V~~-~n~~v~~fr~~ 272 (279)
T d1q7fa_ 203 IGVGINSNGEILIADNHNNFNLTIFTQ-DG--QLISALESKVKHAQCFDVALMDDGSVVLAS-KDYRLYIYRYV 272 (279)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECT-TS--CEEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTEEEEEECS
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEECC-CC--CEEEEEECCCCCCCEEEEEEECCCCEEEEE-CCCEEEEEEEE
T ss_conf 623231478699997899808999999-99--999999688888988379990899199991-89969998722
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.33 E-value=7e-05 Score=44.65 Aligned_cols=232 Identities=11% Similarity=0.056 Sum_probs=122.2
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEC------CCCCEEEEEECCCC-CEEEEECCCCCCCCEEEEEEC
Q ss_conf 33899988899838997089977787479730378503------56768999991499-989995158898757999958
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRA------HHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWEL 1302 (1620)
Q Consensus 1230 ~~S~dg~~~~~~~las~s~D~~i~iWd~~~~~l~tl~g------H~~~V~svafspdg-~~LaSgs~d~~~DgtVrIWdl 1302 (1620)
++++++.. +++-...+.|++|+.+|..+..+.. ....-..+++..+. ..+++... .++.|..++.
T Consensus 29 avd~dg~i-----~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 100 (279)
T d1q7fa_ 29 AVNAQNDI-----IVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---PTHQIQIYNQ 100 (279)
T ss_dssp EECTTCCE-----EEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---GGCEEEEECT
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC---CCCCCCCCCC
T ss_conf 99499989-----999799898999969999999816657886642266300012344552000047---7531000002
Q ss_pred CCCEEEEEEE-CCCCCEEEEEEEECCCEEEEE--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9984999971-477655699993089908992--7929999699992579970368764344689988421224653211
Q 000355 1303 TRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1379 (1620)
Q Consensus 1303 ~tg~~i~~l~-gH~~~V~sIafs~~~~~LaS~--DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1379 (1620)
.+.....+. .......++++.+++..++.. .+.+.+++. +++.+..+....
T Consensus 101 -~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~------------------------ 154 (279)
T d1q7fa_ 101 -YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSK------------------------ 154 (279)
T ss_dssp -TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTT------------------------
T ss_pred -CCCCEEECCCCCCCCCCEECCCCCCCEEEEEECCCEEEEECC-CCCEEECCCCCC------------------------
T ss_conf -563024038886425420000147847999632632567626-875010022001------------------------
Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 24677888489743498217987724998999997799099998789924688608996545687510576508976335
Q 000355 1380 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1459 (1620)
Q Consensus 1380 ~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~DgtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~ 1459 (1620)
.. .....+++.++++.+++....+.|+++|. +|+.+.++... . .......+|+.
T Consensus 155 ----~~----------~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~-g---~~~~P~giavD------- 208 (279)
T d1q7fa_ 155 ----HL----------EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGE-G---ITNYPIGVGIN------- 208 (279)
T ss_dssp ----TC----------SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCT-T---TSCSEEEEEEC-------
T ss_pred ----CC----------CCCCEEEECCCEEEEEEECCCCCEEEEEC-CCCEEEEECCC-C---CCCCCCCCCCC-------
T ss_conf ----02----------56624320120017862013551002304-79444530113-2---11487623231-------
Q ss_pred CCCCCCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCC--CCEEEEE-ECCCCEEEEEECCCCEEEEECCCC
Q ss_conf 765679988999905-9909999789994899997137--7578998-179999999958994999978999
Q 000355 1460 GGAVASPSWIAAGLS-SGQCRLFDVRSGNVIASWRAHD--GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527 (1620)
Q Consensus 1460 ~g~~~~g~~LasGs~-Dg~I~iwD~~tg~~i~~l~~H~--~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~ 1527 (1620)
++|+++++-.. ++.|.+|+. +|+.+.++.... .....|+ .++|.+++ ++.++.|++|.....
T Consensus 209 ----~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 209 ----SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQL 274 (279)
T ss_dssp ----TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCC
T ss_pred ----CCCEEEEEECCCCCEEEEECC-CCCEEEEEECCCCCCCEEEEEEECCCCEEE-EECCCEEEEEEEEEE
T ss_conf ----478699997899808999999-999999996888889883799908991999-918996999872203
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.24 E-value=0.00011 Score=43.33 Aligned_cols=98 Identities=13% Similarity=0.226 Sum_probs=50.6
Q ss_pred EEEEEECCCCEEEEECCCCCEEEE---E---EC-CCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCC
Q ss_conf 899990599099997899948999---9---71-377578998-179999999958994999978999999884840699
Q 000355 1468 WIAAGLSSGQCRLFDVRSGNVIAS---W---RA-HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHT 1539 (1620)
Q Consensus 1468 ~LasGs~Dg~I~iwD~~tg~~i~~---l---~~-H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~ 1539 (1620)
++++-+..+.|..||+.....+.. + .+ ....-..++ ..+|++.++....+.|.+||...+ .....+....
T Consensus 190 lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g--~~~~~i~~p~ 267 (314)
T d1pjxa_ 190 LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG--QPKMRIRCPF 267 (314)
T ss_dssp EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB--SCSEEEECSS
T ss_pred EEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCC--EEEEEEECCC
T ss_conf 99986024311776116765430156899713356664102578347857999827999999969999--7999997999
Q ss_pred CCEE--EEEECCCEE-EEEECCC-EEEEECCC
Q ss_conf 9879--996419999-9994993-69982667
Q 000355 1540 NGIS--GFSVWGQDV-ISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1540 ~~V~--afSpdg~~L-aSgS~Dg-I~vwdl~~ 1567 (1620)
...+ +|.++++.| ++.+.++ |..+++..
T Consensus 268 ~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 268 EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEEECCCCEEEEEECCCCCEEEEECCC
T ss_conf 98789999289899999987899199997899
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.23 E-value=1.2e-05 Score=49.94 Aligned_cols=139 Identities=14% Similarity=0.029 Sum_probs=84.2
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC-CCCCCC
Q ss_conf 7772364015654007999999436666446630899998127877706679898840899175888502488-655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIv~ 181 (1620)
...|+..+..+-++.+.||+.. .++..+.+|+........ ...+. +|...+..+. +--+.+
T Consensus 13 ~~~~~~~~~~~G~s~~~v~rv~--------~~~~~~vlk~~~~~~~~~--~~~~~--------~E~~~l~~l~~~vpvP~ 74 (263)
T d1j7la_ 13 IEKYRCVKDTEGMSPAKVYKLV--------GENENLYLKMTDSRYKGT--TYDVE--------REKDMMLWLEGKLPVPK 74 (263)
T ss_dssp HTTSEEEECSCCCSSSEEEEEE--------CSSCEEEEEEECGGGTTS--TTCHH--------HHHHHHHHHTTTSCCCC
T ss_pred HHCEEEEECCCCCCCCCEEEEE--------ECCCEEEEEECCCCCCCC--HHHHH--------HHHHHHHHHHCCCCCCC
T ss_conf 1352799767899877189999--------089869999848876532--55699--------99999998760699872
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------
Q ss_conf 00699969979999727998-98989862999999999999999999999999993------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS------------------------ 236 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~------------------------ 236 (1620)
++.+...++..++||++++| .+.+.... . . . ...+..++...+..+|+
T Consensus 75 vl~~~~~~~~~~lv~~~l~G~~~~~~~~~--~-~-~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T d1j7la_ 75 VLHFERHDGWSNLLMSEADGVLCSEEYED--E-Q-S---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp EEEEEEETTEEEEEEECCSSEEHHHHTTT--C-S-C---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEEEEECCCCCCCCCCCC--C-C-C---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89997508964999986043343543344--0-2-6---99999989999999855684214357644656555778998
Q ss_pred -----------------------------------CCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf -----------------------------------99130477999537557993379995047865
Q 000355 237 -----------------------------------LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 237 -----------------------------------~~IiHRDLKp~NILi~~~~~~~iKI~DFGlar 268 (1620)
..++|+|+.|.|||+++++ ..-|+||+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~--~~~lIDwe~a~ 212 (263)
T d1j7la_ 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK--VSGFIDLGRSG 212 (263)
T ss_dssp TTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTE--EEEECCCTTCE
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCC--EEEEEECHHCC
T ss_conf 776555543033232005799999999844986781789860047642364996--59996023144
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=0.00066 Score=37.90 Aligned_cols=335 Identities=8% Similarity=0.015 Sum_probs=154.5
Q ss_pred ECCCCCEEEEECCCCEEEE-EEC---CCCCEEEEEECCCCCEEEEECCC-----CCCCCEEEEEECCCCEEEEEEE--CC
Q ss_conf 7089977787479730378-503---56768999991499989995158-----8987579999589984999971--47
Q 000355 1246 VGGLKDESPWKIKASILSS-IRA---HHGALRSVAVGQDECTVFTAGIG-----PGFKGTVQKWELTRINCVSGYY--GH 1314 (1620)
Q Consensus 1246 ~s~D~~i~iWd~~~~~l~t-l~g---H~~~V~svafspdg~~LaSgs~d-----~~~DgtVrIWdl~tg~~i~~l~--gH 1314 (1620)
-..++.+.+|++....... +.. ..-.+....||||+++++.+... -++.+...++|+.+++...... ..
T Consensus 33 ~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~ 112 (465)
T d1xfda1 33 REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS 112 (465)
T ss_dssp CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred EECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCEEECCCCCCC
T ss_conf 92899699998789988998727644445532138989888699998451004760335289998568845641576677
Q ss_pred CCCEEEEEEEECCCEEEE-ECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 765569999308990899-2792999969999257997036876434468998842122465321124677888489743
Q 000355 1315 EEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF 1393 (1620)
Q Consensus 1315 ~~~V~sIafs~~~~~LaS-~DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f 1393 (1620)
...+....|+|++..+|- .++.+.+.+..++..++.......... .++... .......
T Consensus 113 ~~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i-----------~nG~~d-~vyeee~--------- 171 (465)
T d1xfda1 113 NAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVI-----------YNGLSD-WLYEEEI--------- 171 (465)
T ss_dssp SCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTE-----------EEEECC-HHHHHTT---------
T ss_pred CCCCCEEEECCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCEE-----------ECCCCC-HHHHHHH---------
T ss_conf 6431100242678569999613299995489965897112676604-----------436643-1001230---------
Q ss_pred CCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCC--C---CEEEEEECCCCCCCCCC-CCCEEEE---------ECCCC-
Q ss_conf 4982179877249989999977-99099998789--9---24688608996545687-5105765---------08976-
Q 000355 1394 DGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQ--G---QKLHLWRGEPTELGFPS-LVSAICA---------CGSEK- 1456 (1620)
Q Consensus 1394 ~~~~vt~i~~s~dg~~lvsgs~-DgtIriWDl~t--g---~~i~~l~~~~~~i~~~~-~V~sva~---------~~~~~- 1456 (1620)
. .....+-|+|||+.++.... +..|..+.+.. + .....++-.......+. .+.-+.. .+...
T Consensus 172 ~-~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~ 250 (465)
T d1xfda1 172 L-KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP 250 (465)
T ss_dssp S-SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred C-CCCCEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
T ss_conf 3-664348977989868999953666614641234454443133453025688897213799836898178999525767
Q ss_pred ------CCCCCCCCCCCEEEEEEC-C---CCEEEEECCCCCEEEEEEC-CCCCEE----EEE-ECCCCE--EEEEE-CCC
Q ss_conf ------335765679988999905-9---9099997899948999971-377578----998-179999--99995-899
Q 000355 1457 ------MQAGGAVASPSWIAAGLS-S---GQCRLFDVRSGNVIASWRA-HDGYVT----KLA-APEDHL--LVSSS-LDK 1517 (1620)
Q Consensus 1457 ------~s~~g~~~~g~~LasGs~-D---g~I~iwD~~tg~~i~~l~~-H~~~V~----sVa-spdg~~--LvSgS-~Dg 1517 (1620)
+....|.+++++++.... + ..+.++|..+|++...+.. .+++|. ... +++|+. ++..+ .+|
T Consensus 251 ~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g 330 (465)
T d1xfda1 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (465)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred CCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCEEECCCCCEEEEEEEEEECC
T ss_conf 66663045668757993899997410030137997079992787789727851735678605746898057777654316
Q ss_pred --CEEEEECCCC----CCCCCEEEECCCCCEE---EEEECCCEEE-EEECCC---EEEEECCCCCCCCCCCEEECCCEEE
Q ss_conf --4999978999----9998848406999879---9964199999-994993---6998266788989950000110012
Q 000355 1518 --TLRIWDLRRN----WPSQPTVFKGHTNGIS---GFSVWGQDVI-SISNNK---IGLSSLSKSADEDGQHRLVPQKLYM 1584 (1620)
Q Consensus 1518 --tI~iWDl~~~----~~~~~~~l~gH~~~V~---afSpdg~~La-SgS~Dg---I~vwdl~~~~~~~g~~~~~~~kl~~ 1584 (1620)
.+...++... .......+....-.|. +++.+++.+. ++..++ -.+|.+.-.+.....+ ....+
T Consensus 331 ~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~--lt~~~-- 406 (465)
T d1xfda1 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC--LSCDL-- 406 (465)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBC--SSTTS--
T ss_pred CCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEE--ECCCC--
T ss_conf 67168998315666678862698226992199778983899999999968999826899997789986055--31446--
Q ss_pred ECCCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 117987546489999924998999991
Q 000355 1585 VDNGAKNLSVLSSISILPFSRLFLVGT 1611 (1620)
Q Consensus 1585 ~~~g~~h~~~V~svafsPdg~lLasgs 1611 (1620)
...+...++.|+|+++.++...
T Consensus 407 -----~~~~~~~~~~~S~~~~y~v~~~ 428 (465)
T d1xfda1 407 -----VENCTYFSASFSHSMDFFLLKC 428 (465)
T ss_dssp -----SSSCCCCEEEECTTSSEEEEEC
T ss_pred -----CCCCCEEEEEECCCCCEEEEEE
T ss_conf -----7889879999999999999980
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.78 E-value=0.00075 Score=37.55 Aligned_cols=43 Identities=7% Similarity=-0.091 Sum_probs=16.5
Q ss_pred EECCCCCEEEEECCCC-EEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 9708997778747973-037850356768999991499989995
Q 000355 1245 RVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTA 1287 (1620)
Q Consensus 1245 s~s~D~~i~iWd~~~~-~l~tl~gH~~~V~svafspdg~~LaSg 1287 (1620)
+-...+.|..|+.++. ....+.........+++++||..+++.
T Consensus 56 ~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~ 99 (319)
T d2dg1a1 56 LDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCY 99 (319)
T ss_dssp EETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEE
T ss_pred EECCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 97799999999899995999994899870389999999999995
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.75 E-value=0.00083 Score=37.22 Aligned_cols=78 Identities=8% Similarity=-0.090 Sum_probs=51.7
Q ss_pred EEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE
Q ss_conf 77874797303785035676899999149998999515889875799995899849999714776556999930899089
Q 000355 1252 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA 1331 (1620)
Q Consensus 1252 i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La 1331 (1620)
+.+-|.+|.-.+.+..+.+.+.+-+|||||+.||-..... ....+.+.+..++.... +..+.+......|++++..++
T Consensus 21 l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~i~ 98 (269)
T d2hqsa1 21 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLA 98 (269)
T ss_dssp EEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEE-EECCSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEC-CCCCEEEEECCCCCEEE-EEEEECCCCCCEECCCCCEEE
T ss_conf 9999289997679865898426038878999899998152-67513443113675067-764202454302448898646
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.67 E-value=0.0011 Score=36.47 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=34.0
Q ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCC-EEEEEECCCCEEEEECCC
Q ss_conf 7998899990599099997899948999971377578998-17999-999995899499997899
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH-LLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1464 ~~g~~LasGs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~-~LvSgS~DgtI~iWDl~~ 1526 (1620)
.+|++.++....+.|.+||..++..+..+.......++++ .++++ ++++.+.++.|...++..
T Consensus 235 ~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCC
T ss_conf 47857999827999999969999799999799998789999289899999987899199997899
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.51 E-value=0.00036 Score=39.76 Aligned_cols=136 Identities=15% Similarity=0.118 Sum_probs=75.9
Q ss_pred CEEEEE-EEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC--CCCCCEEEEEE
Q ss_conf 156540-079999994366664466308999981278777066798988408991758885024886--55135006999
Q 000355 111 FIGICS-YSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PNVAPVLGLLK 187 (1620)
Q Consensus 111 ~LG~G~-fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIv~l~~~~~ 187 (1620)
.+..|. -+.||+... ..+..+.+|......... +. +|...|+.+.. --+.+++.+..
T Consensus 17 ~~~~G~s~~~v~r~~~-------~~~~~~vlK~~~~~~~~~-----l~--------~E~~~l~~L~~~gvpvP~v~~~~~ 76 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSA-------QGRPVLFVKTDLSGALNE-----LQ--------DEAARLSWLATTGVPCAAVLDVVT 76 (255)
T ss_dssp ECSCTTSSCEEEEEEC-------TTSCCEEEEEECSCTTSC-----HH--------HHHHHHHHHHTTTCCBCCEEEEEE
T ss_pred ECCCCCCCCEEEEEEE-------CCCCEEEEEECCCCCHHH-----HH--------HHHHHHHHHHHCCCCCCCEEEECC
T ss_conf 7678654775899993-------898789999589667768-----99--------999999999865999886132224
Q ss_pred ECCEEEEEEECCCC-CHHH--------------HHHH-C----CCCCC--CHH-HHHHHHH-------------------
Q ss_conf 69979999727998-9898--------------9862-9----99999--999-9999999-------------------
Q 000355 188 TSGLITSVIPKTPY-TLEN--------------ILQF-S----PNALK--SEW-HVRFLMY------------------- 225 (1620)
Q Consensus 188 ~~~~~~LV~E~~~g-sL~~--------------~l~~-~----~~~~l--~~~-~i~~i~~------------------- 225 (1620)
+.+..++||++++| ++.+ .+.. . ....+ ... .......
T Consensus 77 ~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T d1nd4a_ 77 EAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 156 (255)
T ss_dssp CSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 56615999874413554322126899999999999987368854488755412468899999987541101134011213
Q ss_pred HHHHHHHHHHH-------CCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf 99999999993-------99130477999537557993379995047865
Q 000355 226 QLLSAIAYLHS-------LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 226 qil~aL~yLH~-------~~IiHRDLKp~NILi~~~~~~~iKI~DFGlar 268 (1620)
.....+..+.. ..++|+|+.|.|||++.+. .+-|+||+.+.
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~--~~~iID~~~~~ 204 (255)
T d1nd4a_ 157 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGR--FSGFIDCGRLG 204 (255)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTE--EEEECCCTTCE
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCC--EEEEEECHHCC
T ss_conf 7999999998718765795678678887635773796--58999853326
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.51 E-value=0.0018 Score=34.98 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=58.7
Q ss_pred CCCCC--CCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCC--CEEEEEECCCC
Q ss_conf 33899--988899838997089977787479730378503567689999914999899951588987--57999958998
Q 000355 1230 FPTPA--ASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK--GTVQKWELTRI 1305 (1620)
Q Consensus 1230 ~~S~d--g~~~~~~~las~s~D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D--gtVrIWdl~tg 1305 (1620)
..||| |.. ++-.+ ++++.+.++.+...+.|..+.+.+...+|||||+.|+-.+..++.+ ..|.+.+..++
T Consensus 5 ~~sPdi~G~~-----v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 5 LLNPDIHGDR-----IIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp CEEEEEETTE-----EEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred CCCCCCCCCE-----EEEEE-CCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCC
T ss_conf 2588879999-----99990-99689998999987997669985267798789998999986289877228999982599
Q ss_pred EEEEEEE------CCCCCEEEEEEEECCCEEEE
Q ss_conf 4999971------47765569999308990899
Q 000355 1306 NCVSGYY------GHEEVVNDICVLSSSGRIAS 1332 (1620)
Q Consensus 1306 ~~i~~l~------gH~~~V~sIafs~~~~~LaS 1332 (1620)
+...... +.........|++++..++.
T Consensus 79 ~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~ 111 (281)
T d1k32a2 79 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 111 (281)
T ss_dssp EEEECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 528864168875476444343102798877999
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.48 E-value=0.00052 Score=38.60 Aligned_cols=142 Identities=14% Similarity=0.046 Sum_probs=76.6
Q ss_pred EECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCC-CCCHH----HHHHHHHHCCCCCHHHHHHHCCCC-C-C-CCC
Q ss_conf 40156540079999994366664466308999981278-77706----679898840899175888502488-6-5-513
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQ----ESKNFLRLIGVPSFDESSVPGCLR-H-P-NVA 180 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~-~~~~~----~~~~~~~~~~~~~~~Ei~iL~~L~-H-p-NIv 180 (1620)
.+.||.|....||++.+. ..++.+.+|.-... +...+ ..... .+|...|+.+. + | .+.
T Consensus 31 ~~eig~G~~N~vfrV~~~------~~~~svivKqa~p~~r~~g~~~~~~~~R~--------~~E~~~L~~~~~~~p~~vP 96 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQ------EHDRALIIKQAVPYAKVVGESWPLTIDRA--------RIESSALIRQGEHVPHLVP 96 (392)
T ss_dssp EEECCSSSSEEEEEEEC----------CEEEEEEECCGGGC--CCCCCCTTHH--------HHHHHHHHHHHTTCGGGSC
T ss_pred EEEECCCCEEEEEEEEEC------CCCEEEEEECCCCHHCCCCCCCCCCHHHH--------HHHHHHHHHHHHHCCCCCC
T ss_conf 998079852768999957------99848999617713034677788877899--------9999999986505798855
Q ss_pred CEEEEEEECCEEEEEEECCCC--CHHHHHHHCCCCCCCHHHHHHHHHH--------------------------------
Q ss_conf 500699969979999727998--9898986299999999999999999--------------------------------
Q 000355 181 PVLGLLKTSGLITSVIPKTPY--TLENILQFSPNALKSEWHVRFLMYQ-------------------------------- 226 (1620)
Q Consensus 181 ~l~~~~~~~~~~~LV~E~~~g--sL~~~l~~~~~~~l~~~~i~~i~~q-------------------------------- 226 (1620)
+++.+ +.+..++|||++++ .+...+.......-....+..++.+
T Consensus 97 ~v~~~--d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~~~~~~n~~l~~~~e 174 (392)
T d2pula1 97 RVFYS--DTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITE 174 (392)
T ss_dssp CEEEE--ETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEE--CCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHH
T ss_conf 28998--5988779871357765302220154212899999999999999873503344211101233446578887777
Q ss_pred --------------------------------HHHHHHHHH------HCCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf --------------------------------999999999------399130477999537557993379995047865
Q 000355 227 --------------------------------LLSAIAYLH------SLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 227 --------------------------------il~aL~yLH------~~~IiHRDLKp~NILi~~~~~~~iKI~DFGlar 268 (1620)
+...+..+. ...++|+|+.|.|||+++++ ++|+||..|.
T Consensus 175 ~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~~---~~vID~E~a~ 251 (392)
T d2pula1 175 RLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHE---TKVIDPEFAF 251 (392)
T ss_dssp HHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSSC---EEECCCTTCE
T ss_pred HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCCC---EEEECHHHCC
T ss_conf 6401047889887410654557787655207899999998743236886003357767846675993---0895226522
Q ss_pred C
Q ss_conf 5
Q 000355 269 F 269 (1620)
Q Consensus 269 ~ 269 (1620)
.
T Consensus 252 ~ 252 (392)
T d2pula1 252 Y 252 (392)
T ss_dssp E
T ss_pred C
T ss_conf 2
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=0.0024 Score=34.03 Aligned_cols=230 Identities=12% Similarity=0.038 Sum_probs=115.8
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEE--E---CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 7999958998499997147765569999308990899--2---7929999699992579970368764344689988421
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--C---DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1296 tVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS--~---DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
.|.+-|...+...... .+...+.+-+|+|++.+||- . ...+.+.+...+.......
T Consensus 20 ~l~i~d~dG~~~~~l~-~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 80 (269)
T d2hqsa1 20 ELRVSDYDGYNQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS------------------ 80 (269)
T ss_dssp EEEEEETTSCSCEEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC------------------
T ss_pred EEEEECCCCCCCEEEE-CCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEE------------------
T ss_conf 9999928999767986-589842603887899989999815267513443113675067764------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEE--EECCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 224653211246778884897434982179877249989999977-990999--98789924688608996545687510
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRF--IDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~-DgtIri--WDl~tg~~i~~l~~~~~~i~~~~~V~ 1447 (1620)
.........++++|..++.... ++...+ +................ ..
T Consensus 81 -----------------------~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 130 (269)
T d2hqsa1 81 -----------------------FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN-------NT 130 (269)
T ss_dssp -----------------------CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC-------EE
T ss_pred -----------------------EECCCCCCEECCCCCEEEEEEECCCCCCEEECCCCCCCCEEEEECCCC-------CC
T ss_conf -----------------------202454302448898646764027864100002221220000101442-------11
Q ss_pred EEEEECCCCCCCCCCCCCCCE-EEEEECCC--CEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEEC-CCCEEEE
Q ss_conf 576508976335765679988-99990599--099997899948999971377578998-179999999958-9949999
Q 000355 1448 AICACGSEKMQAGGAVASPSW-IAAGLSSG--QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL-DKTLRIW 1522 (1620)
Q Consensus 1448 sva~~~~~~~s~~g~~~~g~~-LasGs~Dg--~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~-DgtI~iW 1522 (1620)
...+ ++++.. +++...+| .|.+.+...+.... +........... +|+++.++..+. ++...+|
T Consensus 131 ~~~~-----------~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~ 198 (269)
T d2hqsa1 131 EPTW-----------FPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 198 (269)
T ss_dssp EEEE-----------CTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred CCCC-----------CCCCCCCEECCCCCCCCEEEEEECCCCCCEE-EECCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
T ss_conf 4543-----------4554433000012687438654213310001-000122223432234543057786058801256
Q ss_pred ECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEEC---CC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCEE
Q ss_conf 789999998848406999879--99641999999949---93-6998266788989950000110012117987546489
Q 000355 1523 DLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISN---NK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS 1596 (1620)
Q Consensus 1523 Dl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgS~---Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~ 1596 (1620)
...... .. .....+..... .|||||+.|+..+. .. +.++++.. +.. . ++. ...+.+.
T Consensus 199 ~~~~~~-~~-~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg-----~~~-~---~lt------~~~g~~~ 261 (269)
T d2hqsa1 199 KQDLAT-GG-VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG-----RFK-A---RLP------ATDGQVK 261 (269)
T ss_dssp EEETTT-CC-EEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS-----CCE-E---ECC------CSSSEEE
T ss_pred EEECCC-CC-CEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCC-----CCE-E---EEE------CCCCCEE
T ss_conf 760356-44-05850686544558989999999998179984799999999-----977-9---985------7998588
Q ss_pred EEEEECC
Q ss_conf 9999249
Q 000355 1597 SISILPF 1603 (1620)
Q Consensus 1597 svafsPd 1603 (1620)
..+|+|-
T Consensus 262 ~p~WSP~ 268 (269)
T d2hqsa1 262 FPAWSPY 268 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
T ss_conf 3782898
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.29 E-value=0.0031 Score=33.23 Aligned_cols=225 Identities=10% Similarity=0.066 Sum_probs=114.1
Q ss_pred CCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEE--C----CCEEEEEC
Q ss_conf 67689999914999899951588987579999589984999971477655699993089908992--7----92999969
Q 000355 1269 HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--D----GTLHVWNS 1342 (1620)
Q Consensus 1269 ~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~--D----gtI~IWD~ 1342 (1620)
...+..++|.++|+..++-.. .+.|..|+..+++....+.........+++.+++..+++. + +.+...+.
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~----~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~ 114 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVF----EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 114 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETT----TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred CCCCEECEECCCCCEEEEECC----CCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECC
T ss_conf 867470789999999999779----9999999899995999994899870389999999999995689731104998738
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC------
Q ss_conf 99925799703687643446899884212246532112467788848974349821798772499899999779------
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN------ 1416 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~D------ 1416 (1620)
.++........... ......+.+.++|+..++....
T Consensus 115 ~~~~~~~~~~~~~~--------------------------------------~~~~nd~~~d~~G~l~vtd~~~~~~~~~ 156 (319)
T d2dg1a1 115 NGDNLQDIIEDLST--------------------------------------AYCIDDMVFDSKGGFYFTDFRGYSTNPL 156 (319)
T ss_dssp TSCSCEEEECSSSS--------------------------------------CCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred CCCEEEEECCCCCC--------------------------------------CCCCCCEEEEECCCEEECCCCCCCCCCC
T ss_conf 99636444267775--------------------------------------5587522677306532001354002574
Q ss_pred CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEE-EEEECCCCEEEEECCCC-CEEEEEE-
Q ss_conf 90999987899246886089965456875105765089763357656799889-99905990999978999-4899997-
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSG-NVIASWR- 1493 (1620)
Q Consensus 1417 gtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~L-asGs~Dg~I~iwD~~tg-~~i~~l~- 1493 (1620)
+.+..++...+ .+..+.. .....+.++++ ++++.+ ++-+..+.|..||+... .......
T Consensus 157 g~v~~~~~dg~-~~~~~~~------~~~~pnGia~s-----------~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~ 218 (319)
T d2dg1a1 157 GGVYYVSPDFR-TVTPIIQ------NISVANGIALS-----------TDEKVLWVTETTANRLHRIALEDDGVTIQPFGA 218 (319)
T ss_dssp EEEEEECTTSC-CEEEEEE------EESSEEEEEEC-----------TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred CEEEEEECCCC-EEEEEEE------CCCEEEEEEEC-----------CCCCEEEEECCCCCCEEEEEECCCCCEECCCCC
T ss_conf 21578841663-3578861------23301000101-----------222127874046891479997699836202463
Q ss_pred ------CCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEE------CCCCCEE--EEEECCCEEEEEE
Q ss_conf ------1377578998-179999999958994999978999999884840------6999879--9964199999994
Q 000355 1494 ------AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK------GHTNGIS--GFSVWGQDVISIS 1556 (1620)
Q Consensus 1494 ------~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~------gH~~~V~--afSpdg~~LaSgS 1556 (1620)
.....-..++ ..+|++.++....+.|.++|. ++ +.+..+. ++...++ +|.+++..++..+
T Consensus 219 ~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G--~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 219 TIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RG--YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp EEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TS--CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred EEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CC--CEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEC
T ss_conf 33312577641036417389999999848998999979-99--59889968875778675046677807998899985
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.86 E-value=0.0077 Score=30.54 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=43.9
Q ss_pred EEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCC----CCEEEEEEEECCCEE-EE------ECCCEEEEECC
Q ss_conf 99914999899951588987579999589984999971477----655699993089908-99------27929999699
Q 000355 1275 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHE----EVVNDICVLSSSGRI-AS------CDGTLHVWNSQ 1343 (1620)
Q Consensus 1275 vafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~----~~V~sIafs~~~~~L-aS------~DgtI~IWD~~ 1343 (1620)
+++. ++ .++.++. |+.+.--|.++|+......-.. ..+++--....+..+ ++ .+|.|.-+|..
T Consensus 111 ~a~~-~~-~i~~~~~----~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~ 184 (571)
T d2ad6a1 111 LAYG-AG-QIVKKQA----NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLK 184 (571)
T ss_dssp CEEE-TT-EEEEECT----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETT
T ss_pred CEEE-CC-EEEEEEC----CCCEEEEEHHHHHHHCCCCCCCCCCCCCEEECCEEECCEEEEEECCCCCCCCCCEEEEECC
T ss_conf 2650-88-6999917----9757821002112202344455443241453675758858885023442346747999888
Q ss_pred CCCEEEEEECC
Q ss_conf 99257997036
Q 000355 1344 TGKLLSVFAEQ 1354 (1620)
Q Consensus 1344 tg~~i~~l~~~ 1354 (1620)
||+.+..+...
T Consensus 185 TG~~~W~~~t~ 195 (571)
T d2ad6a1 185 TGELKWRAFAT 195 (571)
T ss_dssp TCCEEEEEESS
T ss_pred CCCEEEEEECC
T ss_conf 98588997046
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.44 E-value=0.015 Score=28.61 Aligned_cols=225 Identities=11% Similarity=0.016 Sum_probs=111.4
Q ss_pred EECCC--CCEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEE--EE-CC-----CEEEEECCCC
Q ss_conf 99149--998999515889875799995899849999714776556999930899089--92-79-----2999969999
Q 000355 1276 AVGQD--ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SC-DG-----TLHVWNSQTG 1345 (1620)
Q Consensus 1276 afspd--g~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~La--S~-Dg-----tI~IWD~~tg 1345 (1620)
..+|| |+.++-.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|++..|+ +. ++ .|.+++..++
T Consensus 5 ~~sPdi~G~~v~f~~-----~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-----CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp CEEEEEETTEEEEEE-----TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred CCCCCCCCCEEEEEE-----CCCEEEEECCCCCEE-EEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCC
T ss_conf 258887999999990-----996899989999879-97669985267798789998999986289877228999982599
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC------CCE
Q ss_conf 25799703687643446899884212246532112467788848974349821798772499899999779------909
Q 000355 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN------GSL 1419 (1620)
Q Consensus 1346 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~D------gtI 1419 (1620)
+..+........ ... ........++++++.++..... ..+
T Consensus 79 ~~~~lt~~~~~~---------------------------------~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 124 (281)
T d1k32a2 79 EIKRITYFSGKS---------------------------------TGR-RMFTDVAGFDPDGNLIISTDAMQPFSSMTCL 124 (281)
T ss_dssp EEEECCCCCEEE---------------------------------ETT-EECSEEEEECTTCCEEEEECTTSSSTTCCEE
T ss_pred CEEEEEECCCCC---------------------------------CCC-CCCCCCCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf 528864168875---------------------------------476-4443431027988779999713787652024
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CEEEEEECC-----------CCEEEEECCCCC
Q ss_conf 99987899246886089965456875105765089763357656799-889999059-----------909999789994
Q 000355 1420 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASP-SWIAAGLSS-----------GQCRLFDVRSGN 1487 (1620)
Q Consensus 1420 riWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g-~~LasGs~D-----------g~I~iwD~~tg~ 1487 (1620)
...+...+.......+. ...... +++ ..++....+ ............
T Consensus 125 ~~~~~~~~~~~~~~~~~---------~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (281)
T d1k32a2 125 YRVENDGINFVPLNLGP---------ATHILF------------ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGA 183 (281)
T ss_dssp EEEEGGGTEEEECCSCS---------CSEEEE------------ETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTE
T ss_pred EEECCCCCEEEEECCCC---------CCEEEE------------CCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCC
T ss_conf 65158776068801786---------523464------------699849886204664044420588620444113661
Q ss_pred EEEEEECCCCCEEEEE-ECCCCEEEEEECC--CCEEEEECCCCCCCCCEEEEC-CCCCEEEEEECCCEEEEEECCCEEEE
Q ss_conf 8999971377578998-1799999999589--949999789999998848406-99987999641999999949936998
Q 000355 1488 VIASWRAHDGYVTKLA-APEDHLLVSSSLD--KTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISISNNKIGLS 1563 (1620)
Q Consensus 1488 ~i~~l~~H~~~V~sVa-spdg~~LvSgS~D--gtI~iWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgS~DgI~vw 1563 (1620)
...... ......... +++ ..+.....+ ..|.++|+..... ..+.. ....+..|+|||+.|+......|.++
T Consensus 184 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~d~~g~~~---~~lt~~~~~~~~~~SpDG~~I~f~~~~~l~~~ 258 (281)
T d1k32a2 184 FKKIVD-MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL---RKHTSFTDYYPRHLNTDGRRILFSKGGSIYIF 258 (281)
T ss_dssp EEEEEC-CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC---EECCCCCSSCEEEEEESSSCEEEEETTEEEEE
T ss_pred EEECCC-CCCCCCEEEEECC-CCCEECCCCCCCCEEEEECCCCCE---EEEECCCCCCCCCCCCCCCEEEEEECCEEEEE
T ss_conf 224047-7666421331035-320001134552128996899965---98105898644328679899999859999999
Q ss_pred ECC
Q ss_conf 266
Q 000355 1564 SLS 1566 (1620)
Q Consensus 1564 dl~ 1566 (1620)
++.
T Consensus 259 d~~ 261 (281)
T d1k32a2 259 NPD 261 (281)
T ss_dssp CTT
T ss_pred ECC
T ss_conf 899
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.44 E-value=0.015 Score=28.61 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=21.9
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCE
Q ss_conf 757999958998499997147765569999308990899279299996999925
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKL 1347 (1620)
Q Consensus 1294 DgtVrIWdl~tg~~i~~l~gH~~~V~sIafs~~~~~LaS~DgtI~IWD~~tg~~ 1347 (1620)
.+.|..||..+++.. .+. ....+.++++.+++..++++...+..+|..+++.
T Consensus 39 ~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~ 90 (295)
T d2ghsa1 39 ERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDDGLFLRDTATGVL 90 (295)
T ss_dssp GTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE
T ss_pred CCEEEEEECCCCEEE-EEE-CCCCCEEEEEECCCCEEEEEECCCEEEECCCCEE
T ss_conf 999999989989599-998-9998179899659988999737638950464513
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.21 E-value=0.015 Score=28.60 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=45.7
Q ss_pred EEECEEEEEEEEEEEEEECCCCCCC-CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC-CCEEEE
Q ss_conf 6401565400799999943666644-66308999981278777066798988408991758885024886551-350069
Q 000355 108 PIAFIGICSYSIFEELASNFLSGCL-EDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV-APVLGL 185 (1620)
Q Consensus 108 ~~~~LG~G~fG~Vy~a~~~~~~~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI-v~l~~~ 185 (1620)
.+++|+.|-.-.+|++...-..... .....+.++..- ..... .... +|..+++.+.-.++ .++++.
T Consensus 46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~---idr~--------~E~~i~~~ls~~gl~Pkll~~ 113 (395)
T d1nw1a_ 46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETE---SHLV--------AESVIFTLLSERHLGPKLYGI 113 (395)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCH---HHHH--------HHHHHHHHHHHTTSSSCEEEE
T ss_pred EEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC-CCCHH---HHHH--------HHHHHHHHHHHCCCCCEEEEE
T ss_conf 99991785334348999688775445789817999659-96116---5899--------999999999757999808998
Q ss_pred EEECCEEEEEEECCCC
Q ss_conf 9969979999727998
Q 000355 186 LKTSGLITSVIPKTPY 201 (1620)
Q Consensus 186 ~~~~~~~~LV~E~~~g 201 (1620)
|. + .+|+||++|
T Consensus 114 ~~--~--g~I~efi~g 125 (395)
T d1nw1a_ 114 FS--G--GRLEEYIPS 125 (395)
T ss_dssp ET--T--EEEECCCCE
T ss_pred CC--C--CEEEEEECC
T ss_conf 18--9--569997345
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.87 E-value=0.028 Score=26.70 Aligned_cols=130 Identities=13% Similarity=0.051 Sum_probs=69.3
Q ss_pred EEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC-----CCCCCE--EEEEEECC
Q ss_conf 79999994366664466308999981278777066798988408991758885024886-----551350--06999699
Q 000355 118 SIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-----PNVAPV--LGLLKTSG 190 (1620)
Q Consensus 118 G~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-----pNIv~l--~~~~~~~~ 190 (1620)
..||+++. ++|..+++|.-..+..+.. ++. .|...+..|.. +..+.. -..+...+
T Consensus 36 N~vy~v~~-------~dg~~~VlK~~rp~~~s~~---~i~--------~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~ 97 (325)
T d1zyla1 36 NRVYQFQD-------EDRRRFVVKFYRPERWTAD---QIL--------EEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG 97 (325)
T ss_dssp SEEEEECC-------TTCCCEEEEEECTTTSCHH---HHH--------HHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT
T ss_pred CEEEEEEC-------CCCCEEEEEEECCCCCCHH---HHH--------HHHHHHHHHHHCCCCCCCCEECCCCEEEEEEE
T ss_conf 02699983-------8999799998478778899---999--------99999999985599878752068980566534
Q ss_pred EEEEEEECCCC-C-----HHHHH---------HH----C--C-CCCCCHH-------------------HHHHHHHHHHH
Q ss_conf 79999727998-9-----89898---------62----9--9-9999999-------------------99999999999
Q 000355 191 LITSVIPKTPY-T-----LENIL---------QF----S--P-NALKSEW-------------------HVRFLMYQLLS 229 (1620)
Q Consensus 191 ~~~LV~E~~~g-s-----L~~~l---------~~----~--~-~~~l~~~-------------------~i~~i~~qil~ 229 (1620)
..+.++++++| . ...+- +. . + ....... ....+...+-.
T Consensus 98 ~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (325)
T d1zyla1 98 FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDE 177 (325)
T ss_dssp EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 79999865277688999999999989999998863035786556778978876656899987476998898999999999
Q ss_pred HHHHHHH-------CCCEECCCCCCCEEECCCCCEEEEEEECCCCCC
Q ss_conf 9999993-------991304779995375579933799950478655
Q 000355 230 AIAYLHS-------LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 230 aL~yLH~-------~~IiHRDLKp~NILi~~~~~~~iKI~DFGlar~ 269 (1620)
.+..+.. .++||+|+.+.|||++. + ..++||+-+..
T Consensus 178 l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~-~---~~~IDFdd~~~ 220 (325)
T d1zyla1 178 LIAAVTAHWREDFTVLRLHGDCHAGNILWRD-G---PMFVDLDDARN 220 (325)
T ss_dssp HHHHHHHHCCSCSCCEECCSSCSGGGEEESS-S---EEECCCTTCCE
T ss_pred HHHHHHHHCCCCCCCEEECCCCCCCCEEEEC-C---CEEEECHHCCC
T ss_conf 9999998454568712024788804287838-9---35886520146
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.80 E-value=0.03 Score=26.52 Aligned_cols=27 Identities=19% Similarity=0.030 Sum_probs=20.6
Q ss_pred EEEEEECCCCEEEEECCCCCEEEEEEC
Q ss_conf 999997799099998789924688608
Q 000355 1409 RLVVGIGNGSLRFIDINQGQKLHLWRG 1435 (1620)
Q Consensus 1409 ~lvsgs~DgtIriWDl~tg~~i~~l~~ 1435 (1620)
.++.++.+|.+.++|..+|+.+...+.
T Consensus 318 ~v~~~~k~G~l~vlDr~tG~~i~~~~~ 344 (571)
T d2ad6a1 318 LLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CEEECCCCCEEEEEECCCCCEEEEECC
T ss_conf 046326564499985689837655546
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.68 E-value=0.033 Score=26.20 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=35.4
Q ss_pred EEEEECCCCCCCCEEEEEECCCCEEEEEEECCCC--C--EEEEEEEECCCEEE-E------ECCCEEEEECCCCCEEEEE
Q ss_conf 8999515889875799995899849999714776--5--56999930899089-9------2792999969999257997
Q 000355 1283 TVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEE--V--VNDICVLSSSGRIA-S------CDGTLHVWNSQTGKLLSVF 1351 (1620)
Q Consensus 1283 ~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~~--~--V~sIafs~~~~~La-S------~DgtI~IWD~~tg~~i~~l 1351 (1620)
.++.+.. |+.+.-.|..+|+.+..+..+.. . +++--....+..+. + ..|.|.-+|.+||+.+..+
T Consensus 119 ~v~~~~~----~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~ 194 (560)
T d1kv9a2 119 KVYVGTL----DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (560)
T ss_dssp EEEEECT----TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEEC----CCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEEE
T ss_conf 4999738----987999977789577305766755404543200450685103653110013553899977886277664
Q ss_pred EC
Q ss_conf 03
Q 000355 1352 AE 1353 (1620)
Q Consensus 1352 ~~ 1353 (1620)
..
T Consensus 195 ~t 196 (560)
T d1kv9a2 195 YT 196 (560)
T ss_dssp ES
T ss_pred EE
T ss_conf 10
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.60 E-value=0.035 Score=26.02 Aligned_cols=205 Identities=13% Similarity=0.039 Sum_probs=112.2
Q ss_pred CCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEC----CCCCEEEEEE
Q ss_conf 899777874797303785035676899999149998999515889875799995899849999714----7765569999
Q 000355 1248 GLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG----HEEVVNDICV 1323 (1620)
Q Consensus 1248 ~D~~i~iWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~g----H~~~V~sIaf 1323 (1620)
..+.+.-||.++.....+. ....+.++++.+++.+++++. ..+.++|..+++......- ....++++.+
T Consensus 38 ~~~~I~r~d~~~g~~~~~~-~~~~~~~i~~~~dg~l~va~~------~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~v 110 (295)
T d2ghsa1 38 LERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIASD------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRM 110 (295)
T ss_dssp GGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEET------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEE-CCCCCEEEEEECCCCEEEEEE------CCCEEEECCCCEEEEEEEEECCCCCCCCEEEEE
T ss_conf 8999999989989599998-999817989965998899973------763895046451357866404787661013579
Q ss_pred EECCCEE-EEE-----CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 3089908-992-----7929999699992579970368764344689988421224653211246778884897434982
Q 000355 1324 LSSSGRI-ASC-----DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1324 s~~~~~L-aS~-----DgtI~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
.+++... ++. .+.-.+|....++........ ..
T Consensus 111 d~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~-----------------------------------------~~ 149 (295)
T d2ghsa1 111 HPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADI-----------------------------------------SI 149 (295)
T ss_dssp CTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEE-----------------------------------------SS
T ss_pred CCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECC-----------------------------------------CC
T ss_conf 7999998874264313333057662299689986506-----------------------------------------87
Q ss_pred EEEEEEECCCCEEE-EEECCCCEEEEECCCC--CE---EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 17987724998999-9977990999987899--24---688608996545687510576508976335765679988999
Q 000355 1398 YTCLHHIECVERLV-VGIGNGSLRFIDINQG--QK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA 1471 (1620)
Q Consensus 1398 vt~i~~s~dg~~lv-sgs~DgtIriWDl~tg--~~---i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~Las 1471 (1620)
-..+.++++++.+. +.+..+.|..+++... .. ...+..... .......+++. .+|++.++
T Consensus 150 ~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~---~~g~pdG~~vD-----------~~GnlWva 215 (295)
T d2ghsa1 150 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCD-----------AEGHIWNA 215 (295)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEEC-----------TTSCEEEE
T ss_pred CCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCC---CCCCCCCEEEC-----------CCCCEEEE
T ss_conf 64024658776689851566324676453555532453578841675---55666326786-----------99998953
Q ss_pred EECCCCEEEEECCCCCEEEEEECCCCCEEEEE--ECCCCEE-EEEEC
Q ss_conf 90599099997899948999971377578998--1799999-99958
Q 000355 1472 GLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA--APEDHLL-VSSSL 1515 (1620)
Q Consensus 1472 Gs~Dg~I~iwD~~tg~~i~~l~~H~~~V~sVa--spdg~~L-vSgS~ 1515 (1620)
....+.|..||. .|+.+..+.--...+++++ -++.+.| +|...
T Consensus 216 ~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~ 261 (295)
T d2ghsa1 216 RWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 261 (295)
T ss_dssp EETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EECCCCEEEECC-CCCEEEEECCCCCCEEEEEEECCCCCEEEEEECC
T ss_conf 207884688569-9928668638998527989828999999999787
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.42 E-value=0.04 Score=25.59 Aligned_cols=67 Identities=12% Similarity=0.103 Sum_probs=32.7
Q ss_pred EEEEECCCCCCCCEEEEEECCCCEEEEEEECCC---CCEE--EEEEEECCCEEE-E------ECCCEEEEECCCCCEEEE
Q ss_conf 899951588987579999589984999971477---6556--999930899089-9------279299996999925799
Q 000355 1283 TVFTAGIGPGFKGTVQKWELTRINCVSGYYGHE---EVVN--DICVLSSSGRIA-S------CDGTLHVWNSQTGKLLSV 1350 (1620)
Q Consensus 1283 ~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~---~~V~--sIafs~~~~~La-S------~DgtI~IWD~~tg~~i~~ 1350 (1620)
.++.++. |+.+.-.|..+|+.+....... ..+. +.-....+..+. + ..|.|..+|.++|+.+..
T Consensus 130 ~v~~~t~----~g~l~alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~ 205 (573)
T d1kb0a2 130 KVYVGAW----DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (573)
T ss_dssp EEEEECT----TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CEEEEEC----CCCEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCEEE
T ss_conf 1899733----654066616243001014675687650786010279706279921344554322189985688651025
Q ss_pred EEC
Q ss_conf 703
Q 000355 1351 FAE 1353 (1620)
Q Consensus 1351 l~~ 1353 (1620)
+..
T Consensus 206 ~~t 208 (573)
T d1kb0a2 206 WFS 208 (573)
T ss_dssp EES
T ss_pred EEE
T ss_conf 531
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.26 E-value=0.045 Score=25.25 Aligned_cols=34 Identities=15% Similarity=0.388 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 5789999999999998472368874558999987
Q 000355 1032 TVLQVAASTLMAICQRIGPDLTALHVLPHLKELF 1065 (1620)
Q Consensus 1032 ~~~~~~~~~~~~~~~r~g~~~~~~~~~~~l~~~f 1065 (1620)
.+-..|+.++-.++...|++-....++|.+.+++
T Consensus 456 ~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~ 489 (588)
T d1b3ua_ 456 AIREAATSNLKKLVEKFGKEWAHATIIPKVLAMS 489 (588)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 6899999999999998393878999999999986
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.07 E-value=0.051 Score=24.89 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=41.7
Q ss_pred CEEEEECCCCCCCCEEEEEECCCCEEEEEEECCC----CCEEEEEEEECCCEE-EEE------CCCEEEEECCCCCEEEE
Q ss_conf 9899951588987579999589984999971477----655699993089908-992------79299996999925799
Q 000355 1282 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHE----EVVNDICVLSSSGRI-ASC------DGTLHVWNSQTGKLLSV 1350 (1620)
Q Consensus 1282 ~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~gH~----~~V~sIafs~~~~~L-aS~------DgtI~IWD~~tg~~i~~ 1350 (1620)
..++.++. |+.+.--|.+||+.+..+.... ..+++--..-.+..+ ++. .|.|+-+|..||+.+..
T Consensus 122 ~~v~~~t~----dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~ 197 (596)
T d1w6sa_ 122 ALILKTQL----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (596)
T ss_dssp CEEEEECT----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEEEEC----CCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCEEEEECCCCCEEEE
T ss_conf 29999807----98768543656841023101465556422458817777589930234443357328988788857788
Q ss_pred EEC
Q ss_conf 703
Q 000355 1351 FAE 1353 (1620)
Q Consensus 1351 l~~ 1353 (1620)
+..
T Consensus 198 ~~t 200 (596)
T d1w6sa_ 198 AYA 200 (596)
T ss_dssp EES
T ss_pred EEC
T ss_conf 653
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.06 E-value=0.051 Score=24.86 Aligned_cols=77 Identities=18% Similarity=0.088 Sum_probs=46.3
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEE-ECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCCE
Q ss_conf 9099997899948999971377578998-1799999999589949999789999998848406999---87999641999
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQD 1551 (1620)
Q Consensus 1476 g~I~iwD~~tg~~i~~l~~H~~~V~sVa-spdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~---~V~afSpdg~~ 1551 (1620)
|.+.-||..+|+.+-... +..++.+=. +..|.+++.|+.||.++.+|..+| +.+..+.-... ....+..+|+.
T Consensus 453 G~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TG--e~LW~~~~~~~~~a~P~tY~~dGkQ 529 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG--DLLWKFKIPSGAIGYPMTYTHKGTQ 529 (596)
T ss_dssp EEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CEEEEEECCCCCEECCCC-CCCCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 538998078885623327-8888744146866997999789995999999998--4836998999954077689989999
Q ss_pred -EEEE
Q ss_conf -9999
Q 000355 1552 -VISI 1555 (1620)
Q Consensus 1552 -LaSg 1555 (1620)
++..
T Consensus 530 Yvav~ 534 (596)
T d1w6sa_ 530 YVAIY 534 (596)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99999
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=94.82 E-value=0.059 Score=24.44 Aligned_cols=93 Identities=10% Similarity=0.099 Sum_probs=42.4
Q ss_pred EEEEECC-CCE--EEEE-ECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEC-CCCCEEEEEEEEC
Q ss_conf 7787479-730--3785-035676899999149998999515889875799995899849999714-7765569999308
Q 000355 1252 ESPWKIK-ASI--LSSI-RAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVNDICVLSS 1326 (1620)
Q Consensus 1252 i~iWd~~-~~~--l~tl-~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWdl~tg~~i~~l~g-H~~~V~sIafs~~ 1326 (1620)
+.+||.. +.- .... ..|.....+.++.+++.+++.|+.+ .+++.+||..+......-.. ....-.+++...+
T Consensus 54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~---~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~d 130 (387)
T d1k3ia3 54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND---AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD 130 (387)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS---TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT
T ss_pred EEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCEEEEECCC---CCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 9999888896866677898744525689994688689863688---8621675675574421565664210130355317
Q ss_pred CCEEEEE--------CCCEEEEECCCCCE
Q ss_conf 9908992--------79299996999925
Q 000355 1327 SGRIASC--------DGTLHVWNSQTGKL 1347 (1620)
Q Consensus 1327 ~~~LaS~--------DgtI~IWD~~tg~~ 1347 (1620)
+..++.. -..+.+||..+++.
T Consensus 131 G~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 131 GRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCEEEECCCCCCCCCCCEEEEECCCCCCE
T ss_conf 82665213663335432056634888955
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.58 E-value=0.068 Score=24.04 Aligned_cols=74 Identities=12% Similarity=0.058 Sum_probs=40.9
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCC---CCEEEEEECCCE
Q ss_conf 9099997899948999971377578998179999999958994999978999999884840699---987999641999
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHT---NGISGFSVWGQD 1551 (1620)
Q Consensus 1476 g~I~iwD~~tg~~i~~l~~H~~~V~sVaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~---~~V~afSpdg~~ 1551 (1620)
|.+.-||..+|+.+-..+......-..-+..+.+++.|+.|+.++.+|..+| +.+..+.-.. .....+..+|+.
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TG--e~LW~~~~~~~~~~~P~ty~~~GkQ 533 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG--EKLWEAPTGTGVVAAPSTYMVDGRQ 533 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEECCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 6178757877866705168898877607986998999779991999999988--6857998989945167799989999
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=94.09 E-value=0.085 Score=23.35 Aligned_cols=285 Identities=11% Similarity=0.025 Sum_probs=132.1
Q ss_pred EEEEEECCCCCEEEEECCCC-CC------CCEEEEEECCCCEEEE--E-EECCCCCEEEEEEEECCCEEEEE---CCCEE
Q ss_conf 89999914999899951588-98------7579999589984999--9-71477655699993089908992---79299
Q 000355 1272 LRSVAVGQDECTVFTAGIGP-GF------KGTVQKWELTRINCVS--G-YYGHEEVVNDICVLSSSGRIASC---DGTLH 1338 (1620)
Q Consensus 1272 V~svafspdg~~LaSgs~d~-~~------DgtVrIWdl~tg~~i~--~-l~gH~~~V~sIafs~~~~~LaS~---DgtI~ 1338 (1620)
+.......+++.++.|+.++ .+ -..+.+||..+++... . -..|.....+.++.+++..++.+ ..++.
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~ 101 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 101 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred CEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEE
T ss_conf 17899925999999984057666788776068999988889686667789874452568999468868986368886216
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC--
Q ss_conf 996999925799703687643446899884212246532112467788848974349821798772499899999779--
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN-- 1416 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~i~~s~dg~~lvsgs~D-- 1416 (1620)
+||..++.....-.... +......+...|++.++.|+.+
T Consensus 102 ~yd~~~~~w~~~~~~~~---------------------------------------~r~~~~~~~~~dG~v~v~GG~~~~ 142 (387)
T d1k3ia3 102 LYDSSSDSWIPGPDMQV---------------------------------------ARGYQSSATMSDGRVFTIGGSWSG 142 (387)
T ss_dssp EEEGGGTEEEECCCCSS---------------------------------------CCSSCEEEECTTSCEEEECCCCCS
T ss_pred EECCCCCCCCCCCCCCC---------------------------------------CCCCCCEEEECCCCEEEECCCCCC
T ss_conf 75675574421565664---------------------------------------210130355317826652136633
Q ss_pred ----CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEE
Q ss_conf ----9099998789924688608996545687510576508976335765679988999905990999978999489999
Q 000355 1417 ----GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1417 ----gtIriWDl~tg~~i~~l~~~~~~i~~~~~V~sva~~~~~~~s~~g~~~~g~~LasGs~Dg~I~iwD~~tg~~i~~l 1492 (1620)
+.+.+||..+.+-.. +...............+.......+.. ..++++.+..|..++.+..+|..+......-
T Consensus 143 ~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~ 219 (387)
T d1k3ia3 143 GVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLF--GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 219 (387)
T ss_dssp SSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEE--ECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCEEE-CCCCCCCCCCCCCCCCEEECCCEEEEE--EECCCCEEEECCCCCCEEECCCCCCCEEECC
T ss_conf 3543205663488895511-588764431134665136504226999--7079877874686774781486667173166
Q ss_pred E--CC----C--CCEEEEE--ECCCCEEEEEECCC--------CEEEEECCCCCCCCCEEEEC------CCCC-EEEEEE
Q ss_conf 7--13----7--7578998--17999999995899--------49999789999998848406------9998-799964
Q 000355 1493 R--AH----D--GYVTKLA--APEDHLLVSSSLDK--------TLRIWDLRRNWPSQPTVFKG------HTNG-ISGFSV 1547 (1620)
Q Consensus 1493 ~--~H----~--~~V~sVa--spdg~~LvSgS~Dg--------tI~iWDl~~~~~~~~~~l~g------H~~~-V~afSp 1547 (1620)
. .. . ..-.++. ..+++.++.|+... ...+.++....... ..... .... .....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~r~~~~~~~~~ 298 (387)
T d1k3ia3 220 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLP 298 (387)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECT
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCC-CCEEECCCCCCCCCCCEEEECC
T ss_conf 556676657632226378861358824788753678877521000001111135678-8406036656654343356605
Q ss_pred CCCEEEEEECC------------CEEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCC-EEEEEEECCCCEEEEEEC
Q ss_conf 19999999499------------369982667889899500001100121179875464-899999249989999918
Q 000355 1548 WGQDVISISNN------------KIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSV-LSSISILPFSRLFLVGTE 1612 (1620)
Q Consensus 1548 dg~~LaSgS~D------------gI~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~-V~svafsPdg~lLasgs~ 1612 (1620)
+++.++.|+.+ .+.+||.+. ..|.........+. =......+||++|+.||.
T Consensus 299 dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~-------------~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 299 DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-------------DTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 363 (387)
T ss_dssp TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-------------TEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCEEEEECCCCCCCCCCCCCEECEEEEEECCC-------------CEEEECCCCCCCCCCEEEEEECCCCEEEEEECC
T ss_conf 87499988845676688994701079897999-------------918878899975531279999889999999698
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.63 E-value=0.023 Score=27.30 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=26.8
Q ss_pred CCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf 99130477999537557993379995047865
Q 000355 237 LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 237 ~~IiHRDLKp~NILi~~~~~~~iKI~DFGlar 268 (1620)
.|+||+|+.+.|++++.+. ..-|.||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDE--LSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTE--EEEECCCTTCE
T ss_pred CCCCCCCCCHHHHHCCCCC--CEEEECCCCCC
T ss_conf 5033378636564020454--12674222123
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.69 E-value=0.14 Score=21.85 Aligned_cols=75 Identities=16% Similarity=0.076 Sum_probs=38.9
Q ss_pred CCEEEEECCCCCCCCCEEEECCCCCEE-EEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCC
Q ss_conf 949999789999998848406999879-9964199999994993-69982667889899500001100121179875464
Q 000355 1517 KTLRIWDLRRNWPSQPTVFKGHTNGIS-GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSV 1594 (1620)
Q Consensus 1517 gtI~iWDl~~~~~~~~~~l~gH~~~V~-afSpdg~~LaSgS~Dg-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~ 1594 (1620)
|.|.-+|+.++ +.......+..... .++..+.+++.|+.|+ ++.+|.+ +|+ .+|+...+.+..+.
T Consensus 466 G~l~AiD~~TG--~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~-----TGe------~LW~~~~~~~~~~~ 532 (582)
T d1flga_ 466 GSLRAMDPVSG--KVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAK-----SGK------ELWKFQTGSGIVSP 532 (582)
T ss_dssp EEEEEECTTTC--CEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETT-----TCC------EEEEEECSSCCCSC
T ss_pred CEEEEECCCCC--CEEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEEECC-----CCC------EEEEEECCCCCCCC
T ss_conf 75999807899--587326779997450169769869996799969999999-----986------86798899996216
Q ss_pred EEEEEEECCCCE
Q ss_conf 899999249989
Q 000355 1595 LSSISILPFSRL 1606 (1620)
Q Consensus 1595 V~svafsPdg~l 1606 (1620)
. +.|..+|+.
T Consensus 533 P--~ty~~~G~q 542 (582)
T d1flga_ 533 P--ITWEQDGEQ 542 (582)
T ss_dssp C--EEEEETTEE
T ss_pred C--EEEEECCEE
T ss_conf 7--799989999
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=92.26 E-value=0.16 Score=21.50 Aligned_cols=79 Identities=9% Similarity=0.080 Sum_probs=50.1
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEE-EEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCC-
Q ss_conf 90999978999489999713775789-981799999999589949999789999998848406999---8799964199-
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTK-LAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQ- 1550 (1620)
Q Consensus 1476 g~I~iwD~~tg~~i~~l~~H~~~V~s-Vaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~---~V~afSpdg~- 1550 (1620)
|.+.-||..+|+.+-.... ..+..+ .-.-.+.+++.|+.||.++.+|..+| +.+..+.-... ....+..+|+
T Consensus 438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tG--e~LW~~~l~~~~~~~P~ty~~dGkq 514 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG--EALWQFEAQSGIVAAPMTFELAGRQ 514 (560)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEEECCCCEEEEECCC-CCCCCCCEEEECCCEEEEECCCCCEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 6468870778837310257-888877405987998999778981999999998--5827998999955167799989999
Q ss_pred EEEEEEC
Q ss_conf 9999949
Q 000355 1551 DVISISN 1557 (1620)
Q Consensus 1551 ~LaSgS~ 1557 (1620)
+++..+.
T Consensus 515 yv~v~aG 521 (560)
T d1kv9a2 515 YVAIMAG 521 (560)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 9999917
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.11 E-value=0.14 Score=21.76 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=12.6
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 99999999847236887455899998
Q 000355 1039 STLMAICQRIGPDLTALHVLPHLKEL 1064 (1620)
Q Consensus 1039 ~~~~~~~~r~g~~~~~~~~~~~l~~~ 1064 (1620)
.++..+..-.+++....+++|.+.+.
T Consensus 502 ~~l~~l~~~~~~~~~~~~ilp~ll~~ 527 (588)
T d1b3ua_ 502 FCINVLSEVCGQDITTKHMLPTVLRM 527 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHG
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99999999869687899999999988
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.20 E-value=0.64 Score=17.29 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEE-EEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCCE
Q ss_conf 90999978999489999713775789-981799999999589949999789999998848406999---87999641999
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTK-LAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQD 1551 (1620)
Q Consensus 1476 g~I~iwD~~tg~~i~~l~~H~~~V~s-Vaspdg~~LvSgS~DgtI~iWDl~~~~~~~~~~l~gH~~---~V~afSpdg~~ 1551 (1620)
|.+.-+|+.+|+.+-....+ .++.+ ..+..+.+++.|+.|+.++.+|..+| +.+..++-... ....+..+|+.
T Consensus 466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TG--e~LW~~~~~~~~~~~P~ty~~~G~q 542 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG--KELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CEEEEECCCCCCEEEECCCC-CCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 75999807899587326779-99745016976986999679996999999998--6867988999962167799989999
Q ss_pred -EEEEE
Q ss_conf -99994
Q 000355 1552 -VISIS 1556 (1620)
Q Consensus 1552 -LaSgS 1556 (1620)
++..+
T Consensus 543 Yv~i~a 548 (582)
T d1flga_ 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEE
T ss_conf 999993
|