Citrus Sinensis ID: 000357
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1619 | ||||||
| 224104801 | 1729 | predicted protein [Populus trichocarpa] | 0.883 | 0.827 | 0.774 | 0.0 | |
| 225428344 | 1702 | PREDICTED: brefeldin A-inhibited guanine | 0.897 | 0.853 | 0.768 | 0.0 | |
| 449454321 | 1711 | PREDICTED: brefeldin A-inhibited guanine | 0.904 | 0.855 | 0.760 | 0.0 | |
| 449517146 | 1711 | PREDICTED: LOW QUALITY PROTEIN: brefeldi | 0.904 | 0.855 | 0.759 | 0.0 | |
| 356501773 | 1721 | PREDICTED: brefeldin A-inhibited guanine | 0.880 | 0.828 | 0.758 | 0.0 | |
| 297744456 | 1611 | unnamed protein product [Vitis vinifera] | 0.876 | 0.880 | 0.760 | 0.0 | |
| 356501775 | 1732 | PREDICTED: brefeldin A-inhibited guanine | 0.880 | 0.823 | 0.752 | 0.0 | |
| 356552456 | 1714 | PREDICTED: brefeldin A-inhibited guanine | 0.890 | 0.841 | 0.741 | 0.0 | |
| 334187256 | 1687 | SEC7-like guanine nucleotide exchange fa | 0.882 | 0.847 | 0.723 | 0.0 | |
| 297797804 | 1694 | guanine nucleotide exchange family prote | 0.877 | 0.838 | 0.722 | 0.0 |
| >gi|224104801|ref|XP_002313570.1| predicted protein [Populus trichocarpa] gi|222849978|gb|EEE87525.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2342 bits (6070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1137/1468 (77%), Positives = 1279/1468 (87%), Gaps = 38/1468 (2%)
Query: 183 GAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKILSLELLKVVTDNGGPV 242
G+ +GG SKIREDGFLLF+NICKLSMKFSSQE PDD ILLRGKILSLELLKV+ DNGGP+
Sbjct: 268 GSAVGG-SKIREDGFLLFRNICKLSMKFSSQETPDDQILLRGKILSLELLKVIMDNGGPI 326
Query: 243 WLSNAR-------------------------------FLIAIKQFLCLSLLKNSALSVMA 271
W SN R FL IKQFLCLSL+KN+ALSVMA
Sbjct: 327 WRSNERQVTNTFFHSFLNSSHNAYIIISITFSSIWYRFLNTIKQFLCLSLIKNTALSVMA 386
Query: 272 VFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQD 331
+FQLQCSIFM LL K+RSGLK EIGIFFPMLVLRVLENV QPSF+QKMTVLN ++KISQD
Sbjct: 387 IFQLQCSIFMMLLVKFRSGLKEEIGIFFPMLVLRVLENVNQPSFLQKMTVLNFVDKISQD 446
Query: 332 SQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLV 391
SQIIVD+F+NYDCDVD+PN++ERIVNGLLKTALGPPPGSTT+LS QDI FR+ESVKCLV
Sbjct: 447 SQIIVDIFINYDCDVDAPNLYERIVNGLLKTALGPPPGSTTTLSSVQDITFRHESVKCLV 506
Query: 392 SIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDA 451
SIIRSMG WMDQ+LR G++YLPK SE+ +S +N+S NGED DY+ H+EVN E SDA
Sbjct: 507 SIIRSMGAWMDQKLRTGDSYLPKSSESSTSTENHSTLNGEDAGASDYDLHSEVNSEMSDA 566
Query: 452 ATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIG 511
ATLEQRRAYKIELQKGIS+FNRKPSKGIEFLIN+KKVG SPEEVA+FLKNTTGLNET+IG
Sbjct: 567 ATLEQRRAYKIELQKGISIFNRKPSKGIEFLINAKKVGGSPEEVATFLKNTTGLNETVIG 626
Query: 512 DYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYC 571
DYLGER+EF L+VMHAYVDSFNFK MDFG AIRFFLRGFRLPGEAQKIDRIMEKFAERYC
Sbjct: 627 DYLGERDEFCLRVMHAYVDSFNFKEMDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYC 686
Query: 572 KCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLG 631
KCNP+SFTSADTAYVLAYSVIMLNTDAHNSMVKDKM+KADFIRNNRGIDDGKDLPEEYLG
Sbjct: 687 KCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMSKADFIRNNRGIDDGKDLPEEYLG 746
Query: 632 VLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRR 691
LYDQIVKNEIKM+ADSS P+SKQANSLNKLLGLDGILNLV GKQTEEKALGANGLLIRR
Sbjct: 747 TLYDQIVKNEIKMSADSSVPQSKQANSLNKLLGLDGILNLVTGKQTEEKALGANGLLIRR 806
Query: 692 IQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGF 751
IQEQFK+KSGKS S+YH VTD ILRFMVEVCWGPMLAAFSVTLDQSDD+LAT+QCLQGF
Sbjct: 807 IQEQFKAKSGKSGSIYHVVTDAAILRFMVEVCWGPMLAAFSVTLDQSDDRLATSQCLQGF 866
Query: 752 RHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEA 811
+ AVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMK KNVDAVKAIISIAIEDGN+LQ+A
Sbjct: 867 QCAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKLKNVDAVKAIISIAIEDGNNLQDA 926
Query: 812 WEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVM 871
WEHILTCLSR+EHLQLLGEGAP DAS+LT SN E DEK KSMG+PSLKKKGTLQNP+VM
Sbjct: 927 WEHILTCLSRVEHLQLLGEGAPPDASYLTPSNGETDEKALKSMGYPSLKKKGTLQNPAVM 986
Query: 872 AVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIV 931
AVVRGGSYDSTTVG NSPGLVTP QI + I+NLNLLDQIGNFELNHVFA+SQRLNSEAIV
Sbjct: 987 AVVRGGSYDSTTVGANSPGLVTPGQIINLISNLNLLDQIGNFELNHVFANSQRLNSEAIV 1046
Query: 932 AFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLS 991
AFVKALCKVSISELQSPTDPRVFSLTK+VEIAHYNMNRIRLVWSR+WNVLSDFFVSVGLS
Sbjct: 1047 AFVKALCKVSISELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLS 1106
Query: 992 ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCIS 1051
ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVI+MQKS S EIRELI+RCIS
Sbjct: 1107 ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRCIS 1166
Query: 1052 QMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFT 1111
QMVLSRVSNVKSGWKSVF +FT AA+DERKN+VLLAFETMEKIVREYFP+ITETE TTFT
Sbjct: 1167 QMVLSRVSNVKSGWKSVFMVFTVAASDERKNVVLLAFETMEKIVREYFPYITETERTTFT 1226
Query: 1112 DCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPD 1171
DCV+CL TFTNSRFNSDV LNAIAFLRFCA+KLADGGL+CN K VD S P V++ A D
Sbjct: 1227 DCVRCLTTFTNSRFNSDVSLNAIAFLRFCALKLADGGLICNVKSRVDDLSIPIVDEVALD 1286
Query: 1172 LQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVY 1231
+++ S+KDD++SFW+PLLTGLSKL SD RS +RKS+LEVLFNIL DHGHLF R FW+ V+
Sbjct: 1287 VENHSNKDDHASFWIPLLTGLSKLASDPRSAVRKSALEVLFNILNDHGHLFSRSFWITVF 1346
Query: 1232 SHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDV 1291
+ VIFPIF+GV DKKD+ D+ DS TS SP +E STWDSET+A+ +CLVD+F+ FF+V
Sbjct: 1347 NSVIFPIFSGVSDKKDVKDQ---DSSTSASPHTERSTWDSETSAVAVQCLVDLFVSFFNV 1403
Query: 1292 VRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTAS 1351
+RSQL +VSIL GF+RSP++GPASTGVA+LL LAGELGSR+S+DEWREI LALKE AS
Sbjct: 1404 IRSQLQSIVSILMGFVRSPVKGPASTGVASLLRLAGELGSRISEDEWREIFLALKEAAAS 1463
Query: 1352 TLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHIT 1411
LP F+KVLR M+DIE+P + YAD++ SDHG ND++ +DNLQTAAYV+SR+KSHI
Sbjct: 1464 LLPGFMKVLRIMDDIEMPESPNLYADVDAPSDHGFTNDDLPDDNLQTAAYVISRVKSHIA 1523
Query: 1412 LQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLE 1471
+QLL VQV ++LYK + + LS NV+IL+DIF+SIASHAH+LNSE L KKLQ+ C +
Sbjct: 1524 VQLLIVQVVSDLYKANRQFLSAANVRILVDIFTSIASHAHQLNSETNLLKKLQKGCSIAG 1583
Query: 1472 LSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQK 1531
+SDPPMVHFENESY+ YL+FL+D L NPS SE L+IE L CE ILQ+YLNCT
Sbjct: 1584 ISDPPMVHFENESYENYLDFLQDLLKDNPSMSEALSIEEQLAAVCEEILQIYLNCTAGS- 1642
Query: 1532 VKAVKQQR-VVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLID 1590
+AV+Q + V+ W LPLGSA+KEE+AARTSL++SALRVL+ LER++F+ + FPLL+D
Sbjct: 1643 -EAVQQNKTVMHWNLPLGSAKKEEVAARTSLLLSALRVLNDLERDSFRGHARQFFPLLVD 1701
Query: 1591 LVRSEHSSREVQLVLGTMFQSCIGPILL 1618
LVR EH+S EVQ +L +F SCIGPI++
Sbjct: 1702 LVRCEHNSGEVQRILSNIFLSCIGPIIM 1729
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428344|ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449454321|ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449517146|ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356501773|ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297744456|emb|CBI37718.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356501775|ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356552456|ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|334187256|ref|NP_195533.2| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] gi|449061809|sp|F4JSZ5.1|BIG1_ARATH RecName: Full=Brefeldin A-inhibited guanine nucleotide-exchange protein 1; Short=BIG1; AltName: Full=ARF guanine-nucleotide exchange factor BIG1 gi|332661492|gb|AEE86892.1| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297797804|ref|XP_002866786.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] gi|297312622|gb|EFH43045.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1619 | ||||||
| TAIR|locus:2122143 | 1706 | AT4G35380 "AT4G35380" [Arabido | 0.871 | 0.827 | 0.658 | 0.0 | |
| UNIPROTKB|Q10P53 | 1789 | Os03g0246800 "Sec7 domain cont | 0.872 | 0.789 | 0.536 | 0.0 | |
| TAIR|locus:2101906 | 1793 | AT3G60860 "AT3G60860" [Arabido | 0.879 | 0.794 | 0.518 | 0.0 | |
| TAIR|locus:2025502 | 1750 | EDA10 "AT1G01960" [Arabidopsis | 0.809 | 0.748 | 0.537 | 0.0 | |
| UNIPROTKB|A8J189 | 2150 | CHLREDRAFT_148829 "SEC7/BIG-li | 0.235 | 0.177 | 0.47 | 2.6e-245 | |
| ZFIN|ZDB-GENE-030131-108 | 1849 | arfgef1 "ADP-ribosylation fact | 0.383 | 0.335 | 0.397 | 8.8e-190 | |
| MGI|MGI:2442988 | 1846 | Arfgef1 "ADP-ribosylation fact | 0.386 | 0.338 | 0.4 | 2.7e-189 | |
| FB|FBgn0028538 | 1653 | Sec71 "Sec71 ortholog (S. cere | 0.408 | 0.400 | 0.385 | 1.6e-188 | |
| RGD|1560793 | 1846 | Arfgef1 "ADP-ribosylation fact | 0.386 | 0.338 | 0.401 | 2.6e-188 | |
| UNIPROTKB|E1BKI9 | 1788 | ARFGEF2 "Uncharacterized prote | 0.387 | 0.351 | 0.388 | 1.6e-187 |
| TAIR|locus:2122143 AT4G35380 "AT4G35380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4786 (1689.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 941/1429 (65%), Positives = 1140/1429 (79%)
Query: 192 IREDGFLLFKNICKLSMKFSSQENPDDLILLRGKILSLELLKVVTDNGGPVWLSNARFLI 251
+R+D FLLFKN+CKLSM+FSS+EN DD I++RGK LSLELLKV+ DNGG VW +N F+
Sbjct: 292 VRQDAFLLFKNLCKLSMRFSSKENNDDQIMVRGKTLSLELLKVIIDNGGSVWRTNESFIN 351
Query: 252 AIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVL 311
A+KQ+LCLSLLKNSA+S+M++FQLQC+IFMSLLSK RS LKAEIGIFFPM+VLRVLENVL
Sbjct: 352 AVKQYLCLSLLKNSAVSIMSIFQLQCAIFMSLLSKLRSVLKAEIGIFFPMIVLRVLENVL 411
Query: 312 QPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTAXXXXXXXX 371
QPS++QKMTVLNLL+K+SQD Q++VD+FVNYDCDV+S NI ERIVNGLLKTA
Sbjct: 412 QPSYLQKMTVLNLLDKMSQDPQLMVDIFVNYDCDVESSNILERIVNGLLKTALGPPTGSS 471
Query: 372 XXXXXAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGE 431
AQD FR +SVKCLV++ ++MG WMDQQL++ ET PKGS+ +S+D+N+ E
Sbjct: 472 TTLSPAQDSTFRNDSVKCLVNLAKAMGNWMDQQLKVNETVWPKGSQVYASMDSNASQISE 531
Query: 432 -DGSVPDYEFHAEV-NPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVG 489
+G++ D + + NPE DA+ LEQRRAYKIELQKGISLFNRKPSKG+EFLI++KK+G
Sbjct: 532 LEGTISDCDSQPDTSNPEAYDASMLEQRRAYKIELQKGISLFNRKPSKGVEFLISTKKIG 591
Query: 490 DSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRG 549
SPEEVASFL T GLN T+IGDYLGER+E LKVMHAYVDSFNF+ DF AIRFFLRG
Sbjct: 592 SSPEEVASFLMKTAGLNGTVIGDYLGERDELPLKVMHAYVDSFNFEKKDFVEAIRFFLRG 651
Query: 550 FRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTK 609
FRLPGEAQKIDRIMEKFAE Y KCNP SFTSADTAYVLAYSVIMLNTDAHN+MVKDKMTK
Sbjct: 652 FRLPGEAQKIDRIMEKFAEHYWKCNPGSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTK 711
Query: 610 ADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGIL 669
ADF+RNNRGIDDGKDLPEEYLG LYD++VK EI+MN+D+ AP++KQ N LNKLLGLDGIL
Sbjct: 712 ADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEIRMNSDTLAPQNKQVNGLNKLLGLDGIL 771
Query: 670 NLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLA 729
NLV Q +EK GANG LIR IQEQF++K KSES+YH VTD ILRF++EV WGPMLA
Sbjct: 772 NLVSWMQPDEKPHGANGRLIRDIQEQFQAKPEKSESVYHTVTDISILRFILEVSWGPMLA 831
Query: 730 AFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQK 789
AFSVT+DQSDD+LAT+ CLQGFR+AVHVTAVMGMQTQRDAFVTS+AKFT LHCAADMKQK
Sbjct: 832 AFSVTIDQSDDRLATSLCLQGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAADMKQK 891
Query: 790 NVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEK 849
NVDAVKAII+IAIEDGNHL +WEHILTCLSRIEHLQLLGE +P++ ++ E D+K
Sbjct: 892 NVDAVKAIITIAIEDGNHLHGSWEHILTCLSRIEHLQLLGEVSPSEKRYVPTKKAEVDDK 951
Query: 850 TQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQ 909
K++GFP+LKK+G+ QNPSVMAVVRGGSYDST++ + P LVTPEQI FIANLNLLDQ
Sbjct: 952 --KALGFPNLKKRGSFQNPSVMAVVRGGSYDSTSLVKSVPKLVTPEQIKSFIANLNLLDQ 1009
Query: 910 IGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNR 969
IGNFELNHV+A+SQRLNSEAIV+FVKALCKVS+SELQSPTDPRVFSLTKLVE AHYNMNR
Sbjct: 1010 IGNFELNHVYANSQRLNSEAIVSFVKALCKVSMSELQSPTDPRVFSLTKLVETAHYNMNR 1069
Query: 970 IRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRP 1029
IRLVWSR+WNVLSDFFVSVGLSENLSVAIFVMDSLRQL+MKFLEREELANY+FQ+EFLRP
Sbjct: 1070 IRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLSMKFLEREELANYHFQHEFLRP 1129
Query: 1030 FVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFE 1089
FV++MQKS SAEIRELI+RC+SQMVLSRVSNVKSGWK+VF++FT AA DERKNIVLLAFE
Sbjct: 1130 FVVVMQKSSSAEIRELIVRCVSQMVLSRVSNVKSGWKNVFTVFTTAALDERKNIVLLAFE 1189
Query: 1090 TMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGL 1149
T+EKIVR++F I ETE T + DC++CL+TFTNS+F D+ N I FLRFCA+KL +GGL
Sbjct: 1190 TIEKIVRDHFHCIIETEITVYADCIRCLITFTNSKFEGDIGFNTIEFLRFCALKLEEGGL 1249
Query: 1150 VCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLE 1209
V NEK + ++ + ++ D QSF+D D+ S+W+PLLTGL K SD R IRK S+E
Sbjct: 1250 VLNEK--LKNNTISALKEDFSDTQSFTDLDEQVSYWIPLLTGLCKQVSDPRPAIRKRSIE 1307
Query: 1210 VLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCXXXXXXXXXXXXXXTSHSPLSEGSTW 1269
VLF+IL DHGHLF R FW G++S +I P+FN + +S S +E +TW
Sbjct: 1308 VLFHILMDHGHLFTRPFWTGIFSSIILPVFNNIRSKTDMLFEESVDSPSSASLDTEETTW 1367
Query: 1270 DSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGEL 1329
D ET+ + + LVD+ + FF VRSQLP VVSI+ GFI+SP QG +G++ LLHLA L
Sbjct: 1368 DVETSTLALQLLVDLLVKFFRSVRSQLPSVVSIIVGFIKSPFQGSTGSGISVLLHLADGL 1427
Query: 1330 GSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSIN- 1388
S+DEWREI LALKE + T F+KVLRTM+DIE D+E S S+N
Sbjct: 1428 ARSASEDEWREIFLALKEAASLTFAGFMKVLRTMDDIE---------DVETLSGQ-SVNI 1477
Query: 1389 DNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIAS 1448
++D+D+L +YVVSR K HI + V+V ++LY+ + LS ++V IL DIFS IAS
Sbjct: 1478 GDLDDDSLHIMSYVVSRTKKHIDVLSQIVEVVSDLYRRNQFSLSASHVDILADIFSCIAS 1537
Query: 1449 HAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNI 1508
HA +LN++ VL++K +R C V L++P +++FENE+Y++Y+ FL+D +T NP+ S+EL++
Sbjct: 1538 HAQQLNTDTVLRRKFKRACSVQNLTEPQLLNFENEAYKSYMMFLQDMVTCNPNVSKELDL 1597
Query: 1509 ESHLVEACEMILQMYLNCTGXXXXXXXXXXXXXXWILPLGSARKEELAARTSLVVSALRV 1568
ES LV C I+++YL CT W+LP+ S R EE ARTSL+VS+L
Sbjct: 1598 ESRLVTECAKIVKIYLKCTDPQQQEQQQRKPVL-WVLPMESDRVEEATARTSLLVSSLEA 1656
Query: 1569 LSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPIL 1617
L LE E+ KK++S+ FPLL+DLVR+EH S +V VL + +SCIGPIL
Sbjct: 1657 LCSLEAESLKKHVSSFFPLLVDLVRTEHCSPQVPYVLSNVLKSCIGPIL 1705
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| UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-108 arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2442988 Arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| RGD|1560793 Arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BKI9 ARFGEF2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1619 | |||
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 0.0 | |
| pfam01369 | 188 | pfam01369, Sec7, Sec7 domain | 7e-90 | |
| COG5307 | 1024 | COG5307, COG5307, SEC7 domain proteins [General fu | 5e-85 | |
| cd00171 | 185 | cd00171, Sec7, Sec7 domain; Domain named after the | 2e-84 | |
| smart00222 | 189 | smart00222, Sec7, Sec7 domain | 4e-77 | |
| pfam12783 | 166 | pfam12783, Sec7_N, Guanine nucleotide exchange fac | 9e-56 | |
| pfam09324 | 86 | pfam09324, DUF1981, Domain of unknown function (DU | 1e-34 | |
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 4e-08 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 1e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 2e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 8e-07 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 9e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 1e-06 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 6e-06 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 9e-06 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 4e-05 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 1e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 5e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 6e-04 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 0.001 |
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Score = 1956 bits (5070), Expect = 0.0
Identities = 834/1466 (56%), Positives = 1070/1466 (72%), Gaps = 21/1466 (1%)
Query: 169 EGEKGE--GGEGQGNGGAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKI 226
EG KGE GE + + E+ +K+R D FL+F+ +CKLSMK +E D L+RGKI
Sbjct: 319 EGRKGELADGEVEKDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQLMRGKI 378
Query: 227 LSLELLKVVTDNGGPVWLSNARFLIAIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSK 286
L+LELLK++ +N G V+ ++ RFL AIKQ+LCLSLLKNSA S+M +FQL CSIF+SL+S+
Sbjct: 379 LALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASSLMIIFQLSCSIFISLVSR 438
Query: 287 YRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDV 346
+R+GLKAEIG+FFPM+VLRVLENV QP+F QKM VL L+K+ DSQI+VD+F+NYDCDV
Sbjct: 439 FRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINYDCDV 498
Query: 347 DSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLR 406
+S NIFER+VNGLLKTA G PPG T+L P Q+ A + E++KCLV+I+RSMG WM++QLR
Sbjct: 499 NSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLR 558
Query: 407 IGETYLPKGSE-TDSSIDNNSIP---NGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKI 462
+ + K + +++++ S+P D + + H+E++ E SDAAT+EQRRAYK+
Sbjct: 559 LPDPASLKKLDAVENNLEPGSLPVANGNGDENGEGSDSHSELSSETSDAATIEQRRAYKL 618
Query: 463 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 522
ELQ+GISLFNRKP KGIEFLIN+ KVG+SPEE+A+FLK+ +GLN+T+IGDYLGERE+ SL
Sbjct: 619 ELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSL 678
Query: 523 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 582
KVMHAYVDSF+F+GM+F AIR FL+GFRLPGEAQKIDRIMEKFAERYCKCNP +F+SAD
Sbjct: 679 KVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSAD 738
Query: 583 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 642
TAYVLAYSVIMLNTDAHN MVK+KM+ DFIRNNRGIDDGKDLPEE++ LY++I KNEI
Sbjct: 739 TAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEI 798
Query: 643 KMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGK 702
KM D P+ KQ+ + N++LGLD ILN+VI K+ E+ + + LI+ +QEQFK K+ K
Sbjct: 799 KMKEDDLVPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARK 858
Query: 703 SESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMG 762
SES+Y+A TD ILRFMVEVCW PMLAAFSV LDQSDD++ T QCL+GFRHA+HVTAVM
Sbjct: 859 SESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMS 918
Query: 763 MQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRI 822
M+T RDAFVTS+AKFT LH AD+KQKN+DA+KAI+SIA EDGN+LQEAWEHILTC+SR
Sbjct: 919 MKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRF 978
Query: 823 EHLQLLGEGAPTDASFLTVSNVEADEKTQ-KSMGFPSLKKKGTLQNPSVMAVVRGGSYDS 881
EHL LLGEGAP DA+F E+D+ Q KS P LK+KG + A VR GSYDS
Sbjct: 979 EHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDS 1038
Query: 882 TTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVS 941
VG + G+VT EQ+N+ ++NLN+L+Q+G+FE+N +F SQ+LNSEAI+ FVKALCKVS
Sbjct: 1039 AGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVS 1098
Query: 942 ISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVM 1001
+ EL+SP+DPRVFSLTK+VEIAHYNMNRIRLVWS +W+VLSDFFV++G SENLS+AIF M
Sbjct: 1099 MEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAM 1158
Query: 1002 DSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNV 1061
DSLRQL+MKFLEREELANYNFQNEF++PFVI+M+KS + EIRELIIRC+SQMVLSRV+NV
Sbjct: 1159 DSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNV 1218
Query: 1062 KSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFT 1121
KSGWKS+F +FT AA D+ KNIVLLAFE +EKI+REYFP+ITETE+TTFTDCV CL+ FT
Sbjct: 1219 KSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFT 1278
Query: 1122 NSRFNSDVCLNAIAFLRFCAVKLADGGL---VCNEKGSVDGSSSPPVNDNAPDLQSFSDK 1178
NSRFN D+ LNAIAFLRFCA KLA+G L N+ SS D + F+DK
Sbjct: 1279 NSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDK 1338
Query: 1179 DDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPI 1238
DD+ FW PLL GLS+L+ D R IRKS+L+VLF+ L++HGHLF W V+ V+FPI
Sbjct: 1339 DDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPI 1398
Query: 1239 FNGVCDKKDMPDKDEPDSPTSHSPLSE--GSTWDSETAAIGAECLVDIFICFFDVVRSQL 1296
F+ V D DEP+ E W ET + + +VD+F+ F+ V L
Sbjct: 1399 FDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLL 1458
Query: 1297 PGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSF 1356
V+ +L FI+ P Q A G+AA + L G S ++W E++L+LKE +TLP F
Sbjct: 1459 KKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDF 1518
Query: 1357 VKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAY-VVSRMKSHITLQLL 1415
V+ + +P + ++ ++ S DN E Y +S K +QLL
Sbjct: 1519 SYVV---SGEYMPAENIQDSENA-EAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLL 1574
Query: 1416 SVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDP 1475
+Q +Y ++ LS N +L D ++ASHAH++NS+ L+ KLQ + + ++ DP
Sbjct: 1575 LIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQELGSMTQMQDP 1634
Query: 1476 PMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLN--CTGQQKVK 1533
P++ ENESYQ L FL++ + P ++E +ES LVE CE +LQ Y+ GQ
Sbjct: 1635 PLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSED 1694
Query: 1534 AVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVR 1593
+ QQ RW++PLGS ++ ELAAR LVV+ L+ + GL +F+K L FPLL L+
Sbjct: 1695 SSSQQP--RWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLIS 1752
Query: 1594 SEHSSREVQLVLGTMFQSCIGPILLQ 1619
EH S EVQ+ L M S +GP+LLQ
Sbjct: 1753 CEHGSNEVQVALSDMLSSWVGPVLLQ 1778
|
Length = 1780 |
| >gnl|CDD|216460 pfam01369, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >gnl|CDD|214569 smart00222, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) | Back alignment and domain information |
|---|
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1619 | |||
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 100.0 | |
| KOG0929 | 1514 | consensus Guanine nucleotide exchange factor [Intr | 100.0 | |
| KOG0928 | 1386 | consensus Pattern-formation protein/guanine nucleo | 100.0 | |
| COG5307 | 1024 | SEC7 domain proteins [General function prediction | 100.0 | |
| KOG0930 | 395 | consensus Guanine nucleotide exchange factor Cytoh | 100.0 | |
| cd00171 | 185 | Sec7 Sec7 domain; Domain named after the S. cerevi | 100.0 | |
| PF01369 | 190 | Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do | 100.0 | |
| KOG1846 | 1777 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| smart00222 | 187 | Sec7 Sec7 domain. Domain named after the S. cerevi | 100.0 | |
| KOG0931 | 627 | consensus Predicted guanine nucleotide exchange fa | 100.0 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF12783 | 168 | Sec7_N: Guanine nucleotide exchange factor in Golg | 100.0 | |
| KOG0932 | 774 | consensus Guanine nucleotide exchange factor EFA6 | 99.95 | |
| PF09324 | 86 | DUF1981: Domain of unknown function (DUF1981); Int | 99.86 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 96.45 | |
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 96.08 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 91.35 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 90.86 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 90.79 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 90.73 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 90.5 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 90.1 | |
| PF03378 | 435 | CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I | 83.84 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 83.28 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 80.96 |
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-301 Score=2960.82 Aligned_cols=1543 Identities=55% Similarity=0.893 Sum_probs=1315.7
Q ss_pred eEEEEecccCCcCCCCcccchHhhhcchhhhccCCCchHHHHHHHHHHHhhcCCCCCchhHHhhh---------------
Q 000357 2 VIVFTRVEEDSMNVPHFKTISVSELLEFADKSLNEGSSIHFCQNFINEVMGASEGVFEPAMLQLK--------------- 66 (1619)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 66 (1619)
.+||+|||+|+.+++ ++|++++|++++.+++.++++++++||||+++++++.+++..|+.....
T Consensus 208 ~~VF~R~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1780)
T PLN03076 208 VIVFRRMEADSSTVP-IQPIVVAELMEPAEKSDSDTSMTQFVQGFITKIMQDIDGVLNPATAGKSSGSGAHDGAFETTAT 286 (1780)
T ss_pred HHHHHHhhccccccc-ccccccccccccccccccccchhhhhhhhhhhhccccccccCcccccccccccccccccccccc
Confidence 579999999999999 9999999999999999999999999999999999999987666442210
Q ss_pred --hcccCCCCCCCCcccccccccchhcccccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCcCCCcccccCccCCCCC
Q 000357 67 --QNVSTKLPNGDTEVATEDEKGEVVKEGEKGEGEVAKEGENGGGRVPKEGETGEGQVPKEGEKGGGQALKEGEKGEGQA 144 (1619)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (1619)
...|++++++++.++.++++|+++|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 315 (1780)
T PLN03076 287 VETTNPADLLDSTDKDMLDAKYWEISMYK--------------------------------------------------- 315 (1780)
T ss_pred cCCCCcchhhccccccccccccccccccc---------------------------------------------------
Confidence 011112222223333333333332222
Q ss_pred CCCCccCCcccccccccCCcccccccccCCCCCCCCCCCCCCCCccchhhhHHHHHHHHHhhccCCCCCCCCcchhhhhh
Q 000357 145 PKEGKEGEGQVLKDDEKGEDRVVKEGEKGEGGEGQGNGGAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRG 224 (1619)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Daflvfr~lckLs~k~~~~~~~~d~~~~rs 224 (1619)
...+++.++.++.+.+.++ +.++++.++++||||+|||+|||||||+.+.++..|++.+||
T Consensus 316 -----------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~kDAflvFr~lCkLs~K~~~~~~~~d~~~~rs 376 (1780)
T PLN03076 316 -----------SALEGRKGELADGEVEKDD--------DLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQLMRG 376 (1780)
T ss_pred -----------ccccccccccccccccccc--------hhhhhhhhhhhhhHHHHHHHHHHHhCCCCCCCccccHHHHHH
Confidence 1112222222222211222 456778899999999999999999999999888889999999
Q ss_pred hHHHHHHHHHHHHcCCccccCcHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000357 225 KILSLELLKVVTDNGGPVWLSNARFLIAIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVL 304 (1619)
Q Consensus 225 k~lsL~Ll~~iLe~~g~~f~~~~~~~~~ik~~Lc~sL~~n~~S~~~~vf~lsl~If~~L~~~~r~~LK~Eievfl~~I~l 304 (1619)
|+||||||++||+++|++|++||.|+++||+|||++|+||++|++++||++||+|||+|+.+||.|||.||||||++||+
T Consensus 377 KllsL~Li~~ile~~g~~f~~~~~fi~~ik~~Lc~sL~~n~~S~~~~vf~lsl~If~~L~~~~R~~LK~eievF~~~I~l 456 (1780)
T PLN03076 377 KILALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASSLMIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVL 456 (1780)
T ss_pred HHHHHHHHHHHHhcccHhhhcCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCChHHHHHHHHHHHHHHcCchhHHHHHHhcCCCCCCccHHHHHHHHHHHhccCCCCCCCCCCCchhhhHHHH
Q 000357 305 RVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRY 384 (1619)
Q Consensus 305 ~iLe~~~~~~~~qk~~vL~~l~~l~~dp~~lvelyvNYDCd~~~~NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~l~~ 384 (1619)
++||++++++++||+++|++|.+||+||++++|||+|||||.+++||||+||+.|+|+|++.|++.+++..|+||+.+|+
T Consensus 457 ~ile~~~~~s~~qK~~~L~~L~~lc~dp~~lveiyvNYDCD~~~~NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~lk~ 536 (1780)
T PLN03076 457 RVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKL 536 (1780)
T ss_pred HHhhcCCCCCHHHHHHHHHHHHHHHhCccHHHHHHhccCCCCCCchHHHHHHHHHHHHhcCCCCccccccCchHHHHHHH
Confidence 99998777889999999999999999999999999999999999999999999999999998877777788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCC-CCCCCCCC--C--CCCCCCCCCCccccccCCCCCCChHHHHHHHH
Q 000357 385 ESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSET-DSSIDNNS--I--PNGEDGSVPDYEFHAEVNPEFSDAATLEQRRA 459 (1619)
Q Consensus 385 ~aL~cLv~il~sl~~w~~~~~~~~~~~~~~~~~~-~~s~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~ 459 (1619)
.||+||++||+||++|+++++..++.......+. ..+....+ . .++++ .....+..++.+...+++..+|++|+
T Consensus 537 ~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~ 615 (1780)
T PLN03076 537 EAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAVENNLEPGSLPVANGNGDE-NGEGSDSHSELSSETSDAATIEQRRA 615 (1780)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCcccccccchhhcccccccccccccccccc-ccccccccccccccCCcHHHHHHHHH
Confidence 9999999999999999988754433211111110 00000000 0 00000 01111112222334567889999999
Q ss_pred hHHHHHHHHHHhhcChhhhHHHHHhcCCCCCCHHHHHHHHhcCCCCChhhHhhhcccchhhhHHHHHHHHhhcCCCCCCh
Q 000357 460 YKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDF 539 (1619)
Q Consensus 460 ~K~~l~~~~~~FN~~pkkgi~~L~~~~~i~~~p~~iA~FL~~~~~Ldk~~iGeyLg~~~~~~~~vl~~y~~~~df~~~~~ 539 (1619)
+|..+++|+.+||+|||+||+||+++|+++++|++||+||++++||||++||||||++++++++||++|++.|||+|++|
T Consensus 616 ~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~iA~FL~~~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~~~ 695 (1780)
T PLN03076 616 YKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSLKVMHAYVDSFDFQGMEF 695 (1780)
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHhCCCCCHHHHHHHHcCCChHHHHHHHHHHHhCCcCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhhhhhhccccCCCCHHHHHHhhcCC
Q 000357 540 GHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGI 619 (1619)
Q Consensus 540 ~~ALR~fl~~frLPgEaQ~Idri~e~Fa~~y~~~np~~f~~~d~~yvLaysiimLnTDlHn~~vk~kmt~~~Fi~n~~gi 619 (1619)
|+|||.||++||||||+|+||||||+||+|||+|||+.|.|+|++|+||||+||||||+|||++|+|||+++|++|+||+
T Consensus 696 d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~Np~~f~~~D~~yvLaysiIMLnTDlHnp~vk~kMt~~~Fi~n~rgi 775 (1780)
T PLN03076 696 DEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGI 775 (1780)
T ss_pred HHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHhHHhcCCccCCCCCHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccccCCCCCCchhhhhhhhhhcccccccchhhhhhhhHHHHhhhhHHHHHHHHHHhhhc
Q 000357 620 DDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSK 699 (1619)
Q Consensus 620 ~~~~d~p~~~L~~iY~~I~~~ei~l~~~~~~~~~~~~~~~~~~~~~d~~~n~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 699 (1619)
|+|+|+|+|||++||++|+++||+|++|+.++.+++..+.+.+.|+++++|.+.|++++++|+++++++++++++.++++
T Consensus 776 n~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~e~~~~~s~~l~~~~~~~~k~~ 855 (1780)
T PLN03076 776 DDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEK 855 (1780)
T ss_pred CCCCCCCHHHHHHHHHHHHhCcccCcccccccccccccccchhhhhHHHHhHhhHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988766655555566677888888888898889999999999999999999877
Q ss_pred CCCCCCcceecCCccchhhhhHhhhHHHHHHHHhhhhccCcHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHhcc
Q 000357 700 SGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTY 779 (1619)
Q Consensus 700 ~~~~~~~f~~~~~~~~vr~Mfe~~W~piLaaLS~~l~~s~D~~~~~~~L~g~~~~i~Ia~~fgl~~~RDafV~sLakfT~ 779 (1619)
.+++.+.|+.++|.+|+|+||+++|+|++||||++|++++|++++..||+||+.||+|||.|||+++||+||++|||||+
T Consensus 856 ~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~~~~s~d~~~~~~cL~G~~~~i~ia~~f~l~~~rdafv~~L~kfT~ 935 (1780)
T PLN03076 856 ARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTS 935 (1780)
T ss_pred hccccCceeecchHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHcC
Confidence 77777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccchhhHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHhcCCCCCCccccccccchhhh-hhcccCCCCC
Q 000357 780 LHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADE-KTQKSMGFPS 858 (1619)
Q Consensus 780 L~~~~emk~KNv~aik~LL~IA~~~Gn~L~~SW~~IL~~is~le~lqLi~~g~~~d~~~~~~~~~~~~~-~~~~s~~~~s 858 (1619)
|+++.+|++||++|+++||+||+++||+|++||++||+|||+|||+|||+.|++||..+...|..+.+. +..++...|.
T Consensus 936 L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~IL~cISqLerl~Li~~gv~~d~~~~~~~~~~~~~~~~~~~~~~p~ 1015 (1780)
T PLN03076 936 LHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPV 1015 (1780)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHHHHHHHHHHHHHHHhhcCCCcchhhhcccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999987766555443332 2223334444
Q ss_pred ccccCCCCCCcchhhhcCCcccccccCCCCCCCCCHHHHHHHhhhhhhhhhhhcchhHHHHHhcccCCHHHHHHHHHHHH
Q 000357 859 LKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALC 938 (1619)
Q Consensus 859 ~~~~~~~q~~~~~~~~~~~S~~st~~~~~~~~~lt~eei~~~~~~~~~l~~i~s~~id~IF~~S~~L~~eAiv~FV~ALc 938 (1619)
..++++.+.....+.++++++++...+...+..++++++.....+++++++|+++.+|+||++|++|+++||++||+|||
T Consensus 1016 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~i~~~~idkIF~~S~~L~~eai~~fv~AL~ 1095 (1780)
T PLN03076 1016 LKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALC 1095 (1780)
T ss_pred cccccccccchhhhhhcccccccccccccccccCCHHHHHHHHhhhhhhhhhhhhHHHHHHHhcccCCHHHHHHHHHHHH
Confidence 43333322222223345677776665555566788889988777777788899999999999999999999999999999
Q ss_pred HhchhhcCCCCCCccchHHHHHHHHhhcccccccchhhHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhhchhhhh
Q 000357 939 KVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELA 1018 (1619)
Q Consensus 939 ~vS~eEl~s~~~Pr~FsLqKLvEVa~~Nm~Rirl~W~~IW~vL~~hf~~vgch~n~~Va~~AiDsLrQLs~kfLe~eEL~ 1018 (1619)
+||++||++++.||+|+|+|||||++|||+|||++|++||+++++||+++|||+|..|++||+|+|||||||||+++||+
T Consensus 1096 ~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~W~~iW~~l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~ 1175 (1780)
T PLN03076 1096 KVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELA 1175 (1780)
T ss_pred HhhHHHHccCCCCchhHHHHHHHHHHhcccchheehHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhh
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHhccCChHHHHHHHHHHHHHHHhhccccccCcHHHHHHHHHhhccchHHHHHHHHHHHHHHHhcc
Q 000357 1019 NYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREY 1098 (1619)
Q Consensus 1019 ~f~FQk~fLkPFe~Im~~s~~~eIre~IL~cl~qmI~~~~~~IkSGWk~IF~iL~~aa~d~~~~iV~~aF~~l~~I~~d~ 1098 (1619)
||+||++||+||++||.++.+.+|||+|++|+.|||++++++||||||+||+||+.|+.++++.+|+.||+++++|++||
T Consensus 1176 ~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~nIkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~ 1255 (1780)
T PLN03076 1176 NYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREY 1255 (1780)
T ss_pred chhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccchHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHhhcCCcccccCCCCCCC-CCCC--CCCCCCcccCC
Q 000357 1099 FPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGS-SSPP--VNDNAPDLQSF 1175 (1619)
Q Consensus 1099 ~~~l~~~~~~~f~d~I~cL~~F~~~~~d~niSL~AI~~L~~~~~~L~~~~l~~~~~~~~~~~-~~~p--~~~~~~~~~~~ 1175 (1619)
|+.++.+..++|.|||+||.+|++++.++||||+||++||.|+++++++.+........... +..+ ......+...+
T Consensus 1256 f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~~~~~La~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 1335 (1780)
T PLN03076 1256 FPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEF 1335 (1780)
T ss_pred hhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccc
Confidence 99887555799999999999999999999999999999999999999875433211100000 0000 00111122223
Q ss_pred CCcccchhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHhhHhhhhhccccCCCCCCCCCC
Q 000357 1176 SDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPD 1255 (1619)
Q Consensus 1176 ~~~~~~~~lW~pLL~~Ls~l~~d~r~eVR~~ALqtLF~iL~~~G~~f~~~~W~~if~~VLfPifd~l~~~~~~~~~~~~~ 1255 (1619)
.+.+.+..+|||||++|++++.|+|+|||++||+|||++|..||+.|++++|+.||++||||||+.++..++.....+++
T Consensus 1336 ~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~~yG~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~ 1415 (1780)
T PLN03076 1336 TDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPE 1415 (1780)
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 45556778999999999999999999999999999999999999999999999999999999999998765543322111
Q ss_pred CC-CC-CCCCccccccHHHhHHHHHHHHHHHHHHHhchhhhhHHHHHHHHHhcccCCCCchhHHHHHHHHHHHHhhCCCC
Q 000357 1256 SP-TS-HSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRL 1333 (1619)
Q Consensus 1256 ~~-~~-~s~~~e~~~Wl~eT~~~AL~~lv~LF~~yf~~l~~ll~~lL~lL~~~I~q~~~~ia~ig~~cL~~Li~~~g~~f 1333 (1619)
.+ .. ...+.+.++|++|||++||+++++||++||+.++.+|+++|++|.+||||+|++|||||++||++||.+||.+|
T Consensus 1416 ~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F 1495 (1780)
T PLN03076 1416 GQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLF 1495 (1780)
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccC
Confidence 11 00 11235789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhcchhhHHhhcccCccccCCCCCCccccccCCCCCCCCCCcchhhhhhhhhHHHhhhhhHHHH
Q 000357 1334 SQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQ 1413 (1619)
Q Consensus 1334 ~~~~W~~i~~~l~~~f~~T~p~~~~~~~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~cvlQ 1413 (1619)
++++|++|+++|+++|+.|+|+|........ .|.......+.+....+....+..+....++....+.++|||||+|
T Consensus 1496 ~~~~W~~i~~~~~~lf~~T~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~kc~~v~Q 1572 (1780)
T PLN03076 1496 SDEKWLEVVLSLKEAANATLPDFSYVVSGEY---MPAENIQDSENAEAASSSTADNDAEAERSRRLYAAISDAKCRAAVQ 1572 (1780)
T ss_pred CHHHHHHHHHHHHHHHHHhCCchhhcccccc---cccccccccccccccccccccchhhhHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999764321110 1111001111111100001111111112223323455588889999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHhhcccCCCCCCchhhhhHHHHHHHHHHH
Q 000357 1414 LLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLR 1493 (1619)
Q Consensus 1414 LlLIq~v~el~~~~~~~l~~~~l~~Ll~~L~~s~~fA~~FN~d~~LR~~L~k~g~~~~~~~PnLLkQE~~S~~~yl~iLf 1493 (1619)
|||||+++|||+++|.+||++|+++|++||++||+|||+||+|++||++|||+|||+++++|||||||++|+++||+|||
T Consensus 1573 LllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~fA~~fN~d~~lR~~l~~~g~~~~~~~PnLLkqE~~s~~~~l~il~ 1652 (1780)
T PLN03076 1573 LLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQELGSMTQMQDPPLLRLENESYQICLTFLQ 1652 (1780)
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhcccCCCCchhhHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HhhcCCCCcchHHhHHHHHHHHHHHHHHHHHccccchhHHHhhhhccccccccCCchhhhHhhhhhhHHHHHHHHhhcCC
Q 000357 1494 DSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLE 1573 (1619)
Q Consensus 1494 ~m~~d~~~~~~~~~ie~~Lv~lc~~iL~~Y~~~~~~~~~~~~~~~~~~~~~~p~~~~~~r~i~aw~Pvvv~iL~~l~~l~ 1573 (1619)
+||+|+++...+.++|++|+++|.+||++|+++++.+|++..+.+..++|.+|+|++++||++||+||||+||+||++||
T Consensus 1653 ~~~~d~~~~~~~~~~~~~l~~~c~~il~~y~~l~~~~~~~~~~~~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~ 1732 (1780)
T PLN03076 1653 NLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSEDSSSQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLG 1732 (1780)
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccchhHHHHHhcchHHHHHHHHHhcCC
Confidence 99999998888999999999999999999999998555222223334699999999999999999999999999999999
Q ss_pred hHHHHhhhhhhhHHHHHHHhcCCCchhHHHHHHHHHHhhhhccccC
Q 000357 1574 RETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ 1619 (1619)
Q Consensus 1574 ~~~F~~~~~~~ypll~~Li~~e~~~~e~r~al~~~f~~rvg~~~~~ 1619 (1619)
+++|++|+|.||||+|+|++||+.++|||.||+.+|++||||++++
T Consensus 1733 ~~~f~~~~~~~y~l~~~l~~~e~~~~e~r~~l~~~~~~rvg~~~~~ 1778 (1780)
T PLN03076 1733 DSSFEKNLVRFFPLLAGLISCEHGSNEVQVALSDMLSSWVGPVLLQ 1778 (1780)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhhHhc
Confidence 9999999999999999999999889999999999998899999874
|
|
| >KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5307 SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00171 Sec7 Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] | Back alignment and domain information |
|---|
| >KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00222 Sec7 Sec7 domain | Back alignment and domain information |
|---|
| >KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1619 | ||||
| 3ltl_A | 211 | Crystal Structure Of Human Big1 Sec7 Domain Length | 9e-56 | ||
| 1r8q_E | 203 | Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A | 7e-54 | ||
| 1r8s_E | 203 | Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C | 2e-53 | ||
| 1r8m_E | 203 | Sec7 Domain Of The Arf Exchange Factor Arno With Br | 1e-52 | ||
| 1pbv_A | 195 | Sec7 Domain Of The Exchange Factor Arno Length = 19 | 3e-51 | ||
| 2r0d_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 3e-50 | ||
| 1bc9_A | 200 | Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average | 1e-49 | ||
| 4a4p_A | 192 | Crystal Structure Of The Sec7 Domain From Human Cyt | 1e-49 | ||
| 3l8n_A | 202 | Crystal Structure Of A Domain Of Brefeldin A-Inhibi | 5e-49 | ||
| 2r09_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 8e-49 | ||
| 1xsz_A | 356 | The Structure Of Ralf Length = 356 | 1e-28 | ||
| 1re0_B | 221 | Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe | 6e-28 | ||
| 1ku1_A | 230 | Crystal Structure Of The Sec7 Domain Of Yeast Gea2 | 3e-27 | ||
| 1xt0_B | 203 | The Structure Of N-Terminal Sec7 Domain Of Ralf Len | 7e-27 |
| >pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 | Back alignment and structure |
|
| >pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 | Back alignment and structure |
| >pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 | Back alignment and structure |
| >pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 | Back alignment and structure |
| >pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 | Back alignment and structure |
| >pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 | Back alignment and structure |
| >pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 | Back alignment and structure |
| >pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 | Back alignment and structure |
| >pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 | Back alignment and structure |
| >pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 | Back alignment and structure |
| >pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 | Back alignment and structure |
| >pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1619 | |||
| 1xsz_A | 356 | Guanine nucleotide exchange protein; ARF guanine n | 1e-100 | |
| 1r8s_E | 203 | ARNO; protein transport/exchange factor, protein t | 2e-96 | |
| 3ltl_A | 211 | Brefeldin A-inhibited guanine nucleotide-exchange | 7e-96 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 1e-94 | |
| 1ku1_A | 230 | ARF guanine-nucleotide exchange factor 2; SEC7 dom | 2e-86 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 2e-04 |
| >1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 | Back alignment and structure |
|---|
Score = 324 bits (832), Expect = e-100
Identities = 89/360 (24%), Positives = 148/360 (41%), Gaps = 33/360 (9%)
Query: 451 AATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKK--VGDSPEEVASFL-KNTTGLNE 507
A+ E +A + + I FN KP GI + + EE+A F + L+
Sbjct: 2 ASHPEIEKAQR----EIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDL 57
Query: 508 TMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFA 567
+GDYL E + +V+ A+ NF G F +R FL+ F+LPGEAQKIDR+++ F+
Sbjct: 58 EAVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFS 117
Query: 568 ERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMV--KDKMTKADFIRNNRGIDDGKDL 625
Y + NP ++AD AY+LA+ IMLNTD HN + K+KMT RN RG ++G D
Sbjct: 118 GAYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDF 177
Query: 626 PEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGAN 685
++L LY +I ++N ++P + ++
Sbjct: 178 DAKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLN-----------------------K 214
Query: 686 GLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATN 745
+++ S +++ + D W + T+ +D+K +
Sbjct: 215 DSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQ 274
Query: 746 QCLQGFRHAVHVTAVMGMQTQR-DAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIED 804
+Q + + + G Q + + AA V KA + D
Sbjct: 275 ATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGD 334
|
| >1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 | Back alignment and structure |
|---|
| >3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 | Back alignment and structure |
|---|
| >1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1619 | ||||
| d1r8se_ | 187 | a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s | 2e-82 | |
| d1xsza1 | 197 | a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio | 8e-77 | |
| d1ku1a_ | 211 | a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 | 4e-75 | |
| d1b0ba_ | 142 | a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) | 5e-04 |
| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: Exchange factor ARNO species: Human (Homo sapiens) [TaxId: 9606]
Score = 266 bits (681), Expect = 2e-82
Identities = 101/185 (54%), Positives = 127/185 (68%)
Query: 463 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 522
++ G FN P KGI+FL+ ++ + ++PEE+A FL GLN+T IGDYLGEREE +L
Sbjct: 3 KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62
Query: 523 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 582
V+HA+VD F ++ A+R FL FRLPG+AQKIDR+ME FA+RYC CNP F S D
Sbjct: 63 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122
Query: 583 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 642
T YVL+YSVIMLNTD HN V+DKM F+ NRGI++G DLPEE L LYD I
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182
Query: 643 KMNAD 647
K+ D
Sbjct: 183 KIPED 187
|
| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 | Back information, alignment and structure |
|---|
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1619 | |||
| d1ku1a_ | 211 | ARF guanine-exchange factor 2, Gea2 {Baker's yeast | 100.0 | |
| d1r8se_ | 187 | Exchange factor ARNO {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xsza1 | 197 | RalF, N-terminal domain {Legionella pneumophila [T | 100.0 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 97.61 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.34 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 96.71 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 95.24 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 92.71 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 92.61 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 91.61 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 91.26 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 90.37 |
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: ARF guanine-exchange factor 2, Gea2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=432.40 Aligned_cols=186 Identities=38% Similarity=0.649 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC-CHHHHHHHHH-CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 995999999999960591565999996499999-9798999874-07999945676210244145399999998305999
Q 000357 458 RAYKIELQKGISLFNRKPSKGIEFLINSKKVGD-SPEEVASFLK-NTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFK 535 (1619)
Q Consensus 458 k~~K~~l~~~~~~FN~~pkkgi~~l~~~~~i~~-~p~~iA~fL~-~~~~L~k~~iGeyLg~~~~~~~~vl~~fv~~~df~ 535 (1619)
+++|.++.+|+.+||+||++||+||+++|++++ +|++||+||+ .+++|||++||||||+++ +.+||++|++.|||+
T Consensus 9 ~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf~ 86 (211)
T d1ku1a_ 9 MDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDFS 86 (211)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCCT
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCC
T ss_conf 999999999999980499999999998888499998999999986578889899999977984--689999998524768
Q ss_pred CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9880899999852477898557899999999999976199---------------9989900899999999972100000
Q 000357 536 GMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNP---------------SSFTSADTAYVLAYSVIMLNTDAHN 600 (1619)
Q Consensus 536 ~~~~~~ALR~fL~~frLPgEaq~Idrile~Fa~~y~~~Np---------------~~f~~~d~~y~LaysiimLntDlHn 600 (1619)
|++||+|||.||.+||||||+|+|||+|++||++||+||| ..|.++|++|+|+||+||||||+||
T Consensus 87 ~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlHn 166 (211)
T d1ku1a_ 87 GLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHN 166 (211)
T ss_dssp TCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99789999999984508860899999999984999962888841000000001111225710899999999997002038
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 002699987889983137889999988899999999873645557
Q 000357 601 SMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN 645 (1619)
Q Consensus 601 ~~vk~kmt~~~Fi~n~~gi~~~~d~p~~~L~~iY~~I~~~ei~l~ 645 (1619)
|++|+|||+++|++|+||+|+|+|+|+++|++||++|+.+||+|+
T Consensus 167 p~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP 211 (211)
T d1ku1a_ 167 PQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP 211 (211)
T ss_dssp TTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 755678899999999866767788999999999999985877799
|
| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|