Citrus Sinensis ID: 000401

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560-----

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

ccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccc

cHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHcHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccHHccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccHHccccccHccccccHHHHHHHHccccccccccccccHHHccccccHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHccccccccHHHHHHHHHHHHHHHHcccHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEEcccc

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLrslsspselaqSEDILRIFLMACEVRTVKLSVIGLSCIQKLishdavapSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQsrlhpenedNMAQALGICLRLLennrssdsvrNTAAATFRQAVALIFDHVVraeslpmgkfgsgahitrtnsvtgdvsrsinhseslehefasegpslrRETLTKAGKLGLRLLEDLTALAaggsaswlhvNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLrtnvenegetgepyfRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVtfldlplwHRILVLEILRGFCVEARTLRLLFQnfdmnpkntnVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTdeavdvgelesprcdydplpkcmgeTAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTinipnesdrrsavlqspgskrseslvdqkdnivltpkNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDraihsphattqeVSTASSKlaressgqysdfnVLSSLNSQLFESSALMHISAVKSLLSALHQLSHqcmigtsssfgptssqkigsISFSVERMISILVNNlhrveplwDQVVGHFLERcgeklhyswPSILELLRSVADASEKDLITLGFQSLRFIMNdglssiptdcihecvdvtgayssqktELNISLTAVGLLWTTTDFIAKGLVHgiseekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdrDKLLFAVFSLLKKlgaderpevRNSAIRTLFQTLGShgqklsesmwEDCLWnyvfpmldcashmaatsskdewqgkelgtrggKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVlshstkgnlpvayLNSVLDVYEYAlqkspnysdnaagKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTmithdnyeiefghvppVLRTILEIlpllspteQLCSMWLVLLREILQylprsdsplqkkedeeeppstsdnihdvhvrtkydkpngtapttpkdasalsessgsvtaaipnhlfaeKLIPVVVDLFLkapavekciiFPEIIQNLGrcmttrrdnpdssLWRLAVEGFNHILVDDVTKLAANFWQdmkisrparLRVWKEVADVYEIFLVGYcgralpsnslsAVALSGADESLEMSILDILGdkilkspidapFDVLQRLISTIDRcasrtcslpvetvelmpahcskFSLACLHKlfslsssdneasKWNLTRAEVSKISITVLMGRCEYILNRFlidendlgernfpaARLEEIIFILQELARlkihpdtasalplhpvlksglamdensdkrphllvlFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILklrslsspselAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESlpmgkfgsgahitrtnsvtgdVSRSINHSESLehefasegpslrrETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSlrtnvenegetgepyfrRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLfqnfdmnpkNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDeavdvgelesprcdydplPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVlqspgskrseslvdqkdnivLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHsphattqevstaSSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIgtsssfgptssQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdRDKLLFAVFSLLKklgaderpevRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSrntaqkqwDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLprsdsplqkkedeeeppstsdnihdvhvrTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDmkisrparlrvWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITkelalekasmaggr

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKsllsalhqlshqCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISrearvrelvqvllrlITKELALEKASMAGGR

************************************************EDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLEN******VRNTAAATFRQAVALIFDHVVRAESLPMGKFGS******************************************AGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQF*********AVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINI***************************NIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAI*****************************VL**LNSQLFESSALMHISAVKSLLSALHQLSHQCMIGT***********IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGI*************************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAA***********LGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYL********************************************************TAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSS***EASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSG**********PHLLVLFPSFCELVISREARVRELVQVLLRLITKELAL*********

*ALMAVLESDLRA****************EHAILKLRS********Q*EDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLE*************ATFRQAVALIFDHVV****************************************************TKAGKLGLRLLEDLTALAA**********TLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSS***************************************VASEAHSITLAIEGLLGVVFTVATLTDEA***************LPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTIN********************************TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALD********************************VLSSLNSQLFESSALMHISAVKSLLSALHQL********************GSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAA******************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCA*******************RGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHS*******AYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQK********STSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAAN******ISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCS*P**TVELMPAHCSKFSLACLHKLFSL***************EVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKI***************************PHLLVLFPSFCELVISREARVRELVQVLLRLITKELA**********

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINH****************RETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVS***********LSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESD*****************VDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH********************YSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTS*********KIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPK***********LSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDS***************DNIHDVHVRTKYDKPNG******************VTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALE********

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAES*********************************************ETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSV**********************GIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELES*******LPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPN***********************KDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH******************GQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIG************IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSN******SIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCAS*********************KAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEAS*WNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMA***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1565	2.2.26 [Sep-21-2011]
Q9VLT1		1684	Protein MON2 homolog OS=D	yes	no	0.620	0.576	0.255	1e-78
Q29L43		1701	Protein MON2 homolog OS=D	yes	no	0.635	0.584	0.249	1e-77
Q6GP04		1721	Protein MON2 homolog OS=X	N/A	no	0.446	0.406	0.261	4e-58
Q80TL7		1715	Protein MON2 homolog OS=M	yes	no	0.445	0.406	0.264	9e-55
Q7Z3U7		1718	Protein MON2 homolog OS=H	yes	no	0.182	0.165	0.334	2e-41
Q61SD1		1645	Protein MON2 homolog OS=C	N/A	no	0.163	0.155	0.294	7e-32
Q19338		1646	Monensin-resistant homolo	yes	no	0.168	0.159	0.288	1e-31
Q09853		1616	Protein MON2 homolog OS=S	yes	no	0.448	0.434	0.221	1e-19
P48563		1636	Protein MON2 OS=Saccharom	yes	no	0.231	0.221	0.238	1e-15
F4IXW2		1739	Brefeldin A-inhibited gua	no	no	0.107	0.097	0.270	7e-14

>sp\|Q9VLT1\|MON2_DROME Protein MON2 homolog OS=Drosophila melanogaster GN=mon2 PE=2 SV=4	Back alignment and function desciption

 Score =  295 bits (756), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 306/1198 (25%), Positives = 514/1198 (42%), Gaps = 227/1198 (18%)

Query: 7    LESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSE---LAQSEDILRIFLMACEVRT 63
            L++D + LS E +++YP +K+  E AI KL +  S  +         IL   +  CE + 
Sbjct: 21   LQADFKTLSLETKKKYPQIKEACEEAISKLCTAGSSQQNSVYYTVNQILYPLVQGCETKD 80

Query: 64   VKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLH 123
            +K+    L  +Q+LI+   V       I + L    +   E V++    T+L+   + +H
Sbjct: 81   LKIIKFCLGMMQRLITQQVVDQKGALYITNALWTLMENNIEEVKVLQTVTLLLTTNTVVH 140

Query: 124  PENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSG 183
                D +A+AL +C RL  +   + ++ NTA AT RQ V+L+F+ V              
Sbjct: 141  ---GDTLAKALVLCFRL--HYAKNPTIVNTAGATIRQLVSLVFERVY------------- 182

Query: 184  AHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALAAGG 243
                    +  D   S+   +S       EG +   +T      L   L +DL  L    
Sbjct: 183  --------LEKDSVSSLQQQQSSGSPAEGEGGNQDVQTFASDAFL---LFQDLVQLVNAD 231

Query: 244  SASWL-HVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENE 302
               WL  +  + RTF L++LE +L+N  ++F     +  +L+ ++C+L++     NV++ 
Sbjct: 232  QPYWLLGMTEMTRTFGLELLEAVLTNFSAVFHESNDFRLLLKERVCALVIKLFSPNVKHR 291

Query: 303  G-----------ETGEPYF--RRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLP 349
                           +PYF     +LR VA +I+ Y + L+TECE+FLS+++K    D P
Sbjct: 292  QLPAPSNGNAPVPAEKPYFPISMRLLRLVAILIQKYHTILVTECEIFLSLIIKFLDPDKP 351

Query: 350  LWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVV------SSVQF 403
             W R L LE++      +  +    +++D+    TN+V  M+ A+   +      +S   
Sbjct: 352  AWQRALALEVIHKLVTRSSLIAFFCKSYDLKNHATNIVHDMIAAMGSYIRYSLINASAML 411

Query: 404  ---QETSEESLSAVAG------MFS--------------SKAKGIEWILDNDASNAAVLV 440
               Q     SL+A++G      MF               SKA  +E +   DASN     
Sbjct: 412  NGQQNGVANSLTAMSGSNQCGFMFRGAYLPLVATYAPGVSKAVYLEMLDKIDASNIPDSY 471

Query: 441  A-SEAHSI----TLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLC 495
              S  H+I    T +I G++     +    + AV   E   P                LC
Sbjct: 472  GISVGHAILLDMTRSIGGVIQRTPELHPSHNTAVITEEEHKP----------------LC 515

Query: 496  ISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCK 555
            + +V+S W  +L A   ++  S  EA    ILK  Q +   CG+L  ++P ++F+ ++C+
Sbjct: 516  LQLVNSSWSALLSAFIPLVETSIDEATTENILKAMQNYAALCGMLEQLQPRDAFIMAMCR 575

Query: 556  ------FTINIPNESDRRSAVLQSPGSKRSESLVDQKDN--------------------- 588
                  + ++I   + +    L+      S+ L  Q  N                     
Sbjct: 576  ASFPPHYAMSIFANTTQSDGDLRCHTRSGSQDLSSQFINSCSGDAGDFRPQIVAVGTPLP 635

Query: 589  ------------IVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHA 636
                        ++LT KN+Q +R +  +AH    +LG SW +VL+TL  L   +    +
Sbjct: 636  SASLPHSVMQAPVMLTNKNLQCMRAILFLAHNNGGILGTSWHIVLQTLQHLVWILGLKPS 695

Query: 637  TTQEVSTASSKLARES-----SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQL 691
            T   +  A  K A E+     +   +D  VLS + SQLFESS  +   A+  L+ AL +L
Sbjct: 696  TGGSLQ-AMPKPAVEANVGIQTAVMADLPVLSQMLSQLFESSQYLDDVALHHLIDALCKL 754

Query: 692  SHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLERCG--- 748
            SH+ M    ++  P+         F+V +++   + N+ R++ LW  +  H LE C    
Sbjct: 755  SHEAMELAYANREPS--------LFAVAKLLETGLVNMPRIKVLWRPLTNHLLEVCQHRH 806

Query: 749  --------EKLHYSWPSILELLRSVADASEKDLITL---GFQSLRFIMNDGLSSIPTDCI 797
                    E + Y   S L+           +L T+       L  +++  +     DC+
Sbjct: 807  IRMREWGVEAITYLVKSALQFKHKTPLKENMELQTMLLSPLSELSTVLHADVRQRQLDCV 866

Query: 798  HE---------------CVDVTGAYSSQKTELNISLTAVGLLWTTTDFI----------- 831
             +                +++ GA +    E  I      L    TDF+           
Sbjct: 867  LQILNTAGEILSFGWPAIIEIIGAVNEHHGEPLIRTAFQCLQLVITDFLTVMPWRCLPLC 926

Query: 832  -------------------AKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDD 872
                               A GL+  IS+     NQD     K M  + ++   +S L D
Sbjct: 927  ISTAAKFGSQTQELNISLTAIGLMWNISDFFN-QNQD-----KLMSTQLQD---VSILPD 977

Query: 873  QNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCL 932
               ++ M   DKL   +++ L +L  D RP VR SA +TLF T+ +HG  L+   W+  +
Sbjct: 978  FPGTVKMPQFDKLWMCLYAKLGELCVDLRPAVRKSAGQTLFSTISAHGSLLNPPTWQALV 1037

Query: 933  WNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLG 992
            W  +FP+LD    +++++S +         +   + ++LIHHSRNTAQKQW ET VL L 
Sbjct: 1038 WQVLFPLLDNVRALSSSASNE---------KVDASGNILIHHSRNTAQKQWAETQVLTLS 1088

Query: 993  GIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHST 1050
            G+ R+  +    L  L +F   W  +L F++N+ L+ + EVSLAA+  LQ  ++ H+T
Sbjct: 1089 GVCRVFNTKRELLQMLGDFERAWSLILEFIQNAALSKNGEVSLAALKSLQ-EIMYHNT 1145

May be required for traffic between late Golgi and early endosomes.
Drosophila melanogaster (taxid: 7227)

>sp\|Q29L43\|MON2_DROPS Protein MON2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=mon2 PE=3 SV=2	Back alignment and function description

>sp\|Q6GP04\|MON2_XENLA Protein MON2 homolog OS=Xenopus laevis GN=mon2 PE=2 SV=1	Back alignment and function description

>sp\|Q80TL7\|MON2_MOUSE Protein MON2 homolog OS=Mus musculus GN=Mon2 PE=2 SV=2	Back alignment and function description

>sp\|Q7Z3U7\|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2	Back alignment and function description

>sp\|Q61SD1\|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis briggsae GN=CBG06228 PE=3 SV=1	Back alignment and function description

>sp\|Q19338\|MON2_CAEEL Monensin-resistant homolog 2 OS=Caenorhabditis elegans GN=mon-2 PE=3 SV=2	Back alignment and function description

>sp\|Q09853\|MON2_SCHPO Protein MON2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mon2 PE=1 SV=1	Back alignment and function description

>sp\|P48563\|MON2_YEAST Protein MON2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MON2 PE=1 SV=1	Back alignment and function description

>sp\|F4IXW2\|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1565
356535139		1589	PREDICTED: protein MON2 homolog isoform	0.984	0.969	0.735	0.0
449435760		1589	PREDICTED: LOW QUALITY PROTEIN: protein	0.980	0.965	0.700	0.0
218189131		1474	hypothetical protein OsI_03914 [Oryza sa	0.932	0.990	0.602	0.0
222619330		1420	hypothetical protein OsJ_03625 [Oryza sa	0.898	0.990	0.576	0.0
359487909		1628	PREDICTED: protein MON2 homolog [Vitis v	0.456	0.438	0.877	0.0
356535141		1643	PREDICTED: protein MON2 homolog isoform	0.474	0.451	0.836	0.0
298204915		1679	unnamed protein product [Vitis vinifera]	0.475	0.443	0.803	0.0
356574904		1644	PREDICTED: protein MON2 homolog [Glycine	0.474	0.451	0.841	0.0
255542394		1591	guanine nucleotide-exchange, putative [R	0.516	0.507	0.717	0.0
224125556		1638	predicted protein [Populus trichocarpa]	0.509	0.486	0.715	0.0

>gi\|356535139\|ref\|XP_003536106.1\| PREDICTED: protein MON2 homolog isoform 1 [Glycine max]	Back alignment and taxonomy information

 Score = 2319 bits (6010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1183/1609 (73%), Positives = 1337/1609 (83%), Gaps = 68/1609 (4%)

Query: 1    MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACE 60
            MA MAVLESDLRALSAEARRRYPAVKDGAEHAILKLR+LSSPSE+A ++DILRIFLMACE
Sbjct: 1    MAFMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRTLSSPSEIAHNDDILRIFLMACE 60

Query: 61   VRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQS 120
            VRTVKLS+IGLSC+QKLISHDAV+PSAL EI S LK+HA+MVDE VQLKTLQTI IIFQS
Sbjct: 61   VRTVKLSIIGLSCLQKLISHDAVSPSALTEILSTLKDHAEMVDEGVQLKTLQTISIIFQS 120

Query: 121  RLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKF 180
            RLHPENED M+QALGICLRLLEN RSSDSVRNTAAATFRQAVALIFDHVV AESLP GKF
Sbjct: 121  RLHPENEDTMSQALGICLRLLENTRSSDSVRNTAAATFRQAVALIFDHVVLAESLPTGKF 180

Query: 181  GSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALA 240
            G G  ++RTNSVTGDV+RSIN SESL+HE  S  P + RETLT+ GKLGLRLLEDLT+LA
Sbjct: 181  GFGGQLSRTNSVTGDVNRSINLSESLDHESVSGRPPVMRETLTETGKLGLRLLEDLTSLA 240

Query: 241  AGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVE 300
            AGGSA WL VN LQRTF LDILEFILSN+V++FR L+ YEQ LR QICSLLMTSLRTN E
Sbjct: 241  AGGSAIWLRVNILQRTFALDILEFILSNYVAVFRTLLPYEQALRRQICSLLMTSLRTNAE 300

Query: 301  NEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEIL 360
             EGETGEP FRRLVLRSVAHIIRLYSSSLITECEVFLSML+KVTFLDLPLWHRILVLEIL
Sbjct: 301  LEGETGEPSFRRLVLRSVAHIIRLYSSSLITECEVFLSMLLKVTFLDLPLWHRILVLEIL 360

Query: 361  RGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSS 420
            RGFCVEARTLR+LFQNFDM+PKNTNVVEGMVKALARVVS+VQ QE+SEESL+AVAGMFSS
Sbjct: 361  RGFCVEARTLRILFQNFDMHPKNTNVVEGMVKALARVVSNVQVQESSEESLAAVAGMFSS 420

Query: 421  KAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCD 480
            KAKGIEW LDNDASNAAVLVASEAH+ITLA+EGLLGVVFTVATLTD A+DVGELESPRCD
Sbjct: 421  KAKGIEWSLDNDASNAAVLVASEAHAITLAVEGLLGVVFTVATLTDAAIDVGELESPRCD 480

Query: 481  YDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVL 540
             DP  K  G+TAVLCISMVDSLWLTILDALSLILSRSQGEAI+LEILKGYQAFTQACG+L
Sbjct: 481  NDPPVKWTGKTAVLCISMVDSLWLTILDALSLILSRSQGEAIVLEILKGYQAFTQACGIL 540

Query: 541  HAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALR 600
             AVEPLNSFLASLCKFTIN P E+++RSA L SP SKRSE  VDQ+D+IVLTPKNVQALR
Sbjct: 541  RAVEPLNSFLASLCKFTINFPVETEKRSA-LPSPVSKRSELSVDQRDSIVLTPKNVQALR 599

Query: 601  TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFN 660
            TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVST   K  RE S Q SDFN
Sbjct: 600  TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTPVPKFTRELSTQSSDFN 659

Query: 661  VLSSLNSQL------------FESSALMHI--------SAVKSL-LSALHQLSHQCMIGT 699
            +LSSLNSQ+            F    + H           +K++ L AL Q S   ++G+
Sbjct: 660  ILSSLNSQVNKLILVVWGVEPFWDQVISHFLELADNSNPHLKNMALDALDQ-SISAVLGS 718

Query: 700  --------SSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLW------DQVVG---- 741
                    S S  P+   +  +I    ++++S+  + +  ++ L+      D  +G    
Sbjct: 719  DRFQDYKLSKSLEPSQEVRPSTIYIWHDKLMSLECSIISPLKVLYFSTQSVDVRIGSLKI 778

Query: 742  --HFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHE 799
              H LER GEKLHYSWP+ILE+LR VAD SEKDL+TLGFQ+LR IMNDGLS++PTDC+  
Sbjct: 779  LLHVLERYGEKLHYSWPNILEMLRYVADVSEKDLVTLGFQNLRVIMNDGLSALPTDCLQV 838

Query: 800  CVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDG 859
            CVDVTGAYS+QKTELNISLTAVGLLWT TDFIAKGL++G  EEKEA    + S  KQ+D 
Sbjct: 839  CVDVTGAYSAQKTELNISLTAVGLLWTMTDFIAKGLLNGPFEEKEAG---VGSTVKQIDR 895

Query: 860  EKREEKTL--SNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLG 917
            +K E++T    N+ DQ  S+  VD +KLLF+VFSLL+ LGADERPEVRNSA+RTLFQTLG
Sbjct: 896  KKMEDQTRISYNVRDQ-ASVDGVDFEKLLFSVFSLLQNLGADERPEVRNSAVRTLFQTLG 954

Query: 918  SHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRN 977
            +HGQKLS+SMWEDCLWNYVFP LD ASHM ATSSKDEWQGKELGTRGGKAVHMLIHHSRN
Sbjct: 955  THGQKLSKSMWEDCLWNYVFPTLDRASHMVATSSKDEWQGKELGTRGGKAVHMLIHHSRN 1014

Query: 978  TAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAA 1037
            TAQKQWDETLVLVLGGIAR+LR FFPF  +LSNFW+GWESLL FV+NSILNGSKEV+LAA
Sbjct: 1015 TAQKQWDETLVLVLGGIARILRLFFPFFTSLSNFWSGWESLLQFVENSILNGSKEVALAA 1074

Query: 1038 INCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYV 1097
            INCLQTTV SHS+KGN+P+ YL SV+DVYE  L+K  +Y  NAA KV QEILHGLGELYV
Sbjct: 1075 INCLQTTVNSHSSKGNMPMPYLISVIDVYELVLRKPSSYRGNAADKVTQEILHGLGELYV 1134

Query: 1098 QAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLC 1157
            QAQ +F+D +Y QL+AIIDLAV+Q M+T+DN+E+EFG+VPPVLRTILEILPLL PTE + 
Sbjct: 1135 QAQGLFNDVIYTQLIAIIDLAVKQAMLTNDNFEMEFGNVPPVLRTILEILPLLRPTEHIS 1194

Query: 1158 SMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDA 1217
            S W VLLRE L+YLPR DS LQ ++ + +             +  YD PNG  P +P + 
Sbjct: 1195 STWPVLLREFLKYLPRQDSHLQNEDGKID-------------QVNYDAPNGATPISP-NK 1240

Query: 1218 SALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDN 1277
             A+S  SGS TAAIP+++FAEKL+PV+VDLFL+APAVEK II+PEIIQ+LGRCMTTRRDN
Sbjct: 1241 IAVSPGSGS-TAAIPSYIFAEKLVPVLVDLFLQAPAVEKYIIYPEIIQSLGRCMTTRRDN 1299

Query: 1278 PDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGR 1337
            PD++LWRLAVE FN +LV  VTKL  N   D  IS+P R R+WKE+ADVYEIFL+GYCGR
Sbjct: 1300 PDNALWRLAVEAFNRVLVHYVTKL-TNGGPDSTISKPVRTRIWKEIADVYEIFLIGYCGR 1358

Query: 1338 ALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSL 1397
            ALPSNS+SAV L  ADESLEMSIL+ILGD ILK P+D P D+LQRL+ST+DRCASRTCSL
Sbjct: 1359 ALPSNSISAVVLE-ADESLEMSILNILGDTILKLPVDTPSDILQRLVSTLDRCASRTCSL 1417

Query: 1398 PVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILN 1457
            PVETVELMP HCS+FSL CL KLFSLSS  NE + WN+TR+EVSKISITVLM RCEYIL+
Sbjct: 1418 PVETVELMPPHCSRFSLTCLQKLFSLSSYSNEVN-WNMTRSEVSKISITVLMTRCEYILS 1476

Query: 1458 RFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMD-ENSD 1516
            RFL DEN LG+   P ARLEEII++LQELA L IHPD AS+LPLHP+L++ LA + E  D
Sbjct: 1477 RFLTDENGLGDCPLPKARLEEIIYVLQELAHLVIHPDAASSLPLHPLLRTELAREKEKHD 1536

Query: 1517 KRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR 1565
             RPHL  L PSFCELV SRE R+RELVQVLLRL+TKEL+LEK S+A  +
Sbjct: 1537 NRPHLFALLPSFCELVTSRELRIRELVQVLLRLVTKELSLEKLSLASEK 1585

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449435760\|ref\|XP_004135662.1\| PREDICTED: LOW QUALITY PROTEIN: protein MON2 homolog [Cucumis sativus]	Back alignment and taxonomy information

>gi\|218189131\|gb\|EEC71558.1\| hypothetical protein OsI_03914 [Oryza sativa Indica Group]	Back alignment and taxonomy information

>gi\|222619330\|gb\|EEE55462.1\| hypothetical protein OsJ_03625 [Oryza sativa Japonica Group]	Back alignment and taxonomy information

>gi\|359487909\|ref\|XP_003633673.1\| PREDICTED: protein MON2 homolog [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356535141\|ref\|XP_003536107.1\| PREDICTED: protein MON2 homolog isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|298204915\|emb\|CBI34222.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356574904\|ref\|XP_003555583.1\| PREDICTED: protein MON2 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|255542394\|ref\|XP_002512260.1\| guanine nucleotide-exchange, putative [Ricinus communis] gi\|223548221\|gb\|EEF49712.1\| guanine nucleotide-exchange, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224125556\|ref\|XP_002319615.1\| predicted protein [Populus trichocarpa] gi\|222857991\|gb\|EEE95538.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1565
UNIPROTKB\|Q0JIX0		1267	Os01g0772700 "Os01g0772700 pro	0.400	0.494	0.557	0.0
DICTYBASE\|DDB_G0271398		1874	mon2 "unknown" [Dictyostelium	0.233	0.195	0.288	6.9e-103
UNIPROTKB\|Q29L43		1701	mon2 "Protein MON2 homolog" [D	0.235	0.216	0.267	6e-85
FB\|FBgn0031985		1684	mon2 [Drosophila melanogaster	0.230	0.214	0.267	2.6e-84
UNIPROTKB\|Q7Z3U7		1718	MON2 "Protein MON2 homolog" [H	0.230	0.209	0.278	1.8e-82
MGI\|MGI:1914324		1715	Mon2 "MON2 homolog (yeast)" [M	0.229	0.209	0.285	8.7e-76
WB\|WBGene00008685		1646	mon-2 [Caenorhabditis elegans	0.164	0.156	0.25	1.8e-49
UNIPROTKB\|Q19338		1646	mon-2 "Monensin-resistant homo	0.164	0.156	0.25	1.8e-49
UNIPROTKB\|G4N2E3		1761	MGG_07913 "Uncharacterized pro	0.103	0.091	0.298	4.4e-45
ASPGD\|ASPL0000017942		1608	AN3643 [Emericella nidulans (t	0.086	0.083	0.297	9.4e-43

UNIPROTKB\|Q0JIX0 Os01g0772700 "Os01g0772700 protein" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

 Score = 1734 (615.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 365/655 (55%), Positives = 465/655 (70%)

Query:   732 VEPLWDQVVGHFLERCGEKLHYSWPSILELLR--SVADASEKDLITLGFQSLRFIMNDGL 789
             VEP+WDQ+  H LE   +    S   ++   R  +V DASEKDLI+LGFQS+R IMN+GL
Sbjct:   494 VEPIWDQIAAHHLEWVLKNFRASVQLLIIFKRKKAVTDASEKDLISLGFQSIRVIMNEGL 553

Query:   790 SSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQD 849
             ++IP  C+ EC+ VTGAY +QKT++NISLTAVGLLWT TDF+ KGL   IS+  E AN  
Sbjct:   554 ATIPVQCLDECILVTGAYGTQKTDINISLTAVGLLWTATDFVVKGL---ISKSAEKANG- 609

Query:   850 LCSVPKQMDGEKREEKTLSNLDD--QNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNS 907
                   +  G  +EE   S+  D  Q+    +VD +KL F+VFS+L+KLGAD+RPEVRNS
Sbjct:   610 -MDEEAESGGTVKEEALSSSEKDIKQSPLKSVVDYNKLFFSVFSVLQKLGADDRPEVRNS 668

Query:   908 AIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKA 967
             A+RTLFQTL +HGQKLS++MWEDCLW YVFPML+  SH+A+TSS+DEWQGKELGTR GKA
Sbjct:   669 AVRTLFQTLSTHGQKLSKTMWEDCLWIYVFPMLERVSHLASTSSRDEWQGKELGTRAGKA 728

Query:   968 VHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSIL 1027
             VHMLIHHSRNTAQKQWDET+VLVLGGIARLLRSFFPFL  LS F +GW  LL FVKN IL
Sbjct:   729 VHMLIHHSRNTAQKQWDETIVLVLGGIARLLRSFFPFLQQLSKFSSGWVLLLDFVKNGIL 788

Query:  1028 NGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQE 1087
             NGSKEV+LAAINCLQT V S+ +KGNL  +Y+ SVLD+YE  LQ SPNY +++A KVKQE
Sbjct:   789 NGSKEVALAAINCLQTFVGSNCSKGNLESSYVKSVLDIYELVLQTSPNYKNDSADKVKQE 848

Query:  1088 ILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEIL 1147
             +L GLG+LYVQAQ +F+D MY +L+A++ L ++ +M   D Y+ E G +P + R ILEI+
Sbjct:   849 VLRGLGDLYVQAQSLFNDEMYLRLMAVMHLMIKSSMNPTD-YDNELGSIPALQRGILEII 907

Query:  1148 PLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPN 1207
             P+L PT  L SMW  LL E+L YL   D+PLQK+  E         +H+     K D  N
Sbjct:   908 PMLRPTTMLSSMWSPLLLELLCYLNSHDTPLQKQGKE---------MHE----QKSDAAN 954

Query:  1208 GTAPTTPKDASALSESSGSVTAAIP---NHLFAEKLIPVVVDLFLKAPAVEKCIIFPEII 1264
             G A     + S L+ SS  +  A+      +F EKL+P+VV+LFL+AP  E+    PE+I
Sbjct:   955 G-ATHGFLERSHLNNSSTKMDNAVGCGWGIMFIEKLVPIVVNLFLEAPQNERFNSSPEVI 1013

Query:  1265 QNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVA 1324
             + LGRCM TRRDNP  +LWR++ E FN +LVD+VT  +A+    M   + +R R WKEVA
Sbjct:  1014 RCLGRCMNTRRDNPKGTLWRVSAECFNRVLVDEVTHDSADCKSGMSSYKFSRARFWKEVA 1073

Query:  1325 DVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDV 1379
             DVYE FLVG CGR L S+  S  +++ ADE+LEM++L + GD +LK   DAP ++
Sbjct:  1074 DVYETFLVGSCGRVLSSDVPSVDSVT-ADETLEMAVLTVFGDNVLKLQKDAPVEL 1127

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

DICTYBASE\|DDB_G0271398 mon2 "unknown" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29L43 mon2 "Protein MON2 homolog" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]	Back alignment and assigned GO terms

FB\|FBgn0031985 mon2 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z3U7 MON2 "Protein MON2 homolog" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1914324 Mon2 "MON2 homolog (yeast)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

WB\|WBGene00008685 mon-2 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|Q19338 mon-2 "Monensin-resistant homolog 2" [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N2E3 MGG_07913 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000017942 AN3643 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1565
pfam12783		166	pfam12783, Sec7_N, Guanine nucleotide exchange fac	3e-17
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	1e-13
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	1e-04

>gnl\|CDD\|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 24/171 (14%)

Query: 229 GLRLLEDL-----TALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYE--- 280
              +  DL       L       +L      +   L+++E IL NH  +F    S     
Sbjct: 8   AFLVFRDLCKLSMKPLDEEEKPDFLSHEERSKLLSLELIESILENHGDVFL---SSPPEL 64

Query: 281 -QVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSM 339
             ++R  +C  L+ +L ++         P F R  LR    ++  + S L  E EVFLS+
Sbjct: 65  LDLIRQYLCPSLLRNLSSSSF-------PVFVR-SLRIFLLLLSKFRSHLKLEIEVFLSL 116

Query: 340 LVKVTFLDL---PLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVV 387
           L+    L+    P W + LVLE+LR  C + + L  ++ N+D +  + N+ 
Sbjct: 117 LILRI-LESDNSPFWQKELVLEVLRRLCRDPQLLVEIYLNYDCDEDSKNIF 166

The full-length Sec7 functions proximally in the secretory pathway as a protein binding scaffold for the coat protein complexes COPII-COPI. The COPII-COPI-protein switch is necessary for maturation of the vesicular-tubular cluster, VTC, intermediate compartments for Golgi compartment biogenesis. This N-terminal domain however does not appear to be binding either of the COP or the ARF. Length = 166

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1565
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	100.0
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	100.0
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	100.0
KOG0928		1386	consensus Pattern-formation protein/guanine nucleo	100.0
PF12783		168	Sec7_N: Guanine nucleotide exchange factor in Golg	99.95
COG5307		1024	SEC7 domain proteins [General function prediction	99.58
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	98.58
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	98.4
PF09324		86	DUF1981: Domain of unknown function (DUF1981); Int	97.84
KOG1846		1777	consensus Uncharacterized conserved protein, conta	96.82
KOG0930		395	consensus Guanine nucleotide exchange factor Cytoh	86.7

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=9.9e-142  Score=1314.36  Aligned_cols=1423  Identities=31%  Similarity=0.373  Sum_probs=1055.9

Q ss_pred             CchHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHhcCCCCCc----ccC-chHHHHHHHHHhcCCCchHHHHHHHHHH
Q 000401            1 MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSE----LAQ-SEDILRIFLMACEVRTVKLSVIGLSCIQ   75 (1565)
Q Consensus         1 m~~~~~L~~dL~~L~~EskRK~~~lk~A~e~al~~Lk~~~~~~~----l~~-~~~~l~Pfllac~sk~~kl~~iaL~~lq   75 (1565)
                      |+++++|.+||++|++||||||++||+|||+++++||+..+.++    +.. +++|+.||++||.+|+.|++.+||+|||
T Consensus         9 ~sl~~aL~adLrsLsseArkKnn~VK~aAdkSi~~Lr~isS~s~ds~vlet~~edf~~PfllaC~sr~tRl~~ials~iQ   88 (1610)
T KOG1848|consen    9 MSLVRALLADLRSLSSEARKKNNEVKLAADKSIQELRQISSASRDSDVLETPNEDFLVPFLLACISRNTRLFVIALSCIQ   88 (1610)
T ss_pred             HHHHHHHHHHHHHhhHHHHhhchHHHHHHHhHHHHHHhhccccccccccccCCcccccceeeecccCcccceeeHHHHHH
Confidence            78999999999999999999999999999999999999999876    444 8999999999999999999999999999


Q ss_pred             HHHccCCCCcchHHHHHH-HHHhccCCCCchHHHHHHHHHHHHHcCCCCccChHHHHHHHHHhhhcccccCChHHHHHHH
Q 000401           76 KLISHDAVAPSALKEIFS-MLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTA  154 (1565)
Q Consensus        76 kLis~~~i~~~~l~~il~-~l~~~~~~~de~vqLKILQ~L~~l~~s~~~~i~g~~L~~~l~~C~~L~~~sk~~~~v~~TA  154 (1565)
                      ||..|++++++...++++ .|+.+...  +.+|||+||++|.++++|...+.|+.|.+++.+||+|+. +|++ +|.|||
T Consensus        89 kL~~~dsleps~~aeildn~L~a~~qa--e~~QLrvLQtiPii~~syl~fi~~p~l~kll~iCfnLl~-~knk-vV~NaA  164 (1610)
T KOG1848|consen   89 KLGRHDSLEPSVTAEILDNNLWAAAQA--EWIQLRVLQTIPIIFFSYLTFITGPPLLKLLIICFNLLY-QKNK-VVFNAA  164 (1610)
T ss_pred             HHhccCCCCCcccHHHHHHHHHHHHHH--HHHHHhhhccccceeeeceeeccCcHHHHHHHHHHHHHc-CCCc-ceechh
Confidence            999999999965555544 45544333  568999999999999999999999999999999999975 5778 999999


Q ss_pred             HHHHHHHHHHHHhhhhhcccCCCCCCCCCCCccccccccCCcccccCCCCcccccccCCCCcccccchhhhHHHHHHHHH
Q 000401          155 AATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLE  234 (1565)
Q Consensus       155 ~ATL~Qlv~~VF~rv~~~e~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~da~~vf~  234 (1565)
                      +||+||+|..|||||..+.+. .+..   -+.     .....+              .+.+......+++..+|++..|.
T Consensus       165 aAtlrQlV~~vFdrv~ies~~-~d~~---l~s-----l~~~s~--------------t~sl~aa~~~~~~l~~dI~~~~~  221 (1610)
T KOG1848|consen  165 AATLRQLVLLVFDRVPIESDA-FDFI---LPS-----LTEASG--------------TSSLEAALTALDPLQKDICVGFE  221 (1610)
T ss_pred             HHHHHHHHHHHHHhccccccc-cccc---chh-----hhccCC--------------ccchhhcccccchHHHhHhcchH
Confidence            999999999999999864221 1110   000     000000              00000013345788899999999


Q ss_pred             HHHHhccCCCCCcc-cccchhhHhhHHHHHHHHHcCccccccCHHHH--HHHHHHHHHHHHHhhccccc-------CC--
Q 000401          235 DLTALAAGGSASWL-HVNTLQRTFVLDILEFILSNHVSLFRMLVSYE--QVLRHQICSLLMTSLRTNVE-------NE--  302 (1565)
Q Consensus       235 dLc~L~~~e~p~~l-~~~~~~k~~~LELiesiL~~~~~~F~~~pel~--~llr~~lc~lLi~~ls~n~~-------~~--  302 (1565)
                      ++|.+..+..++|| .+.+.++..|+|++|+++.+....+..|.+|.  ++++..+||++.+++..++.       .+  
T Consensus       222 ~i~l~~~~~~~~~L~~Iee~~~s~~~elLesilks~~s~~dq~qdf~~a~ll~~~~~Py~~Rl~~~sv~~i~~l~~~ea~  301 (1610)
T KOG1848|consen  222 NIQLMYPAIFDQLLAFIEESTKSPGLELLESILKSNASKSDQIQDFAPAELLALNVVPYAERLLLRSVDLIQKLACHEAV  301 (1610)
T ss_pred             HHHHhcccccHhHHhcchhccccchhhhhhhhhhcchhhhHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccHHH
Confidence            99999999999998 57789999999999999999999999999999  99999999999997654421       00  


Q ss_pred             --------------------CCCCcccHH--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 000401          303 --------------------GETGEPYFR--RLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEIL  360 (1565)
Q Consensus       303 --------------------~~~~~~~F~--~~~lRi~~~Li~~~~~~Lk~E~EvfLs~l~~~L~~~~~~w~r~L~LE~l  360 (1565)
                                          +-.+...|+  .-..+.....+..|-..+..++++|++.+++.-..+.+.|+|.+.+|++
T Consensus       302 ~~~ev~lnvi~slisn~~ll~~~~~~s~~~~kdlv~~l~~~v~l~~~~i~v~~~v~la~~lk~~s~~~~~~p~~l~~~~~  381 (1610)
T KOG1848|consen  302 VNEEVLLNVIKSLISNTNLLFDPESLSYPCSKDLVWKLAVSVLLYVLSIGVPVAVFLASLLKFDSMDLELWPRFLDFLFL  381 (1610)
T ss_pred             HHHHHHHHHHHHHHHhcccccchhhccccccHHHHhHHhHHHheeecccCcchhhhHHHHhhhhhcCcccCccHhHHHhh
Confidence                                000111111  0122233333444556778899999999999988999999999999999


Q ss_pred             HHHhcChHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhhccccc-------cCchhhHHhhhh-cccCccccchhccccC
Q 000401          361 RGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQ-------ETSEESLSAVAG-MFSSKAKGIEWILDND  432 (1565)
Q Consensus       361 ~~l~~dp~ll~~iy~nYD~~~~~~nI~~~li~~L~~~~~~~~~~-------~~s~e~l~~~~g-~f~~k~kGi~~ll~~d  432 (1565)
                      ++++.++..++.+++|+||++...++++..+..+++++....+.       +...++.+.+.| .|..|.+||+|-.+.|
T Consensus       382 ~siv~k~dsi~~~trn~diktk~thlldk~~~plan~vy~~lv~ti~nsi~e~l~k~s~esg~~eFt~k~k~Ie~~~dnd  461 (1610)
T KOG1848|consen  382 KSIVPKNDSIQIFTRNFDIKTKVTHLLDKEILPLANFVYKELVGTISNSIQEMLNKSSIESGGSEFTSKEKGIELREDND  461 (1610)
T ss_pred             ccCCCCchhhHHHHhhcccCcchHHHHhhcccccchhHHHHHHHhhhHHHHHHHHHhHHhhcCccchhhhcCceeeccCc
Confidence            99999999999999999999999999999999999998743321       222233333344 7888889999865555


Q ss_pred             cCCCcccCCchhhHHHHHHHHHHHHHhHhhhcccccccCCCCCCCCCCCCCCCccCC-CchHHHHHHHHHhhHHHHHHHH
Q 000401          433 ASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMG-ETAVLCISMVDSLWLTILDALS  511 (1565)
Q Consensus       433 ~~~~~~ll~~Ea~~I~~~~e~~a~~i~sv~~ltd~~~~~g~~~~p~~e~~~~~~~~~-~~~~~~~~m~e~~W~~iLaalS  511 (1565)
                      +...+.++--+.-.+..+-|++..+.++++.+.+.+.+.+.+..+.....+...-.+ ...+....|+.+.|+.++++++
T Consensus       462 s~stavl~~l~~~~~~li~e~~~ss~~avSt~~~~a~~v~~l~~~~~~~s~k~~l~~~~kLe~i~~a~~snq~tildalk  541 (1610)
T KOG1848|consen  462 SMSTAVLLQLSFSNKVLIPEGLYSSRMAVSTLLKRAQDVLHLYIEDEVLSNKCPLPRQTKLEIIFDAVLSNQSTILDALK  541 (1610)
T ss_pred             hHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHhhhhhhhccCCccccceeehhHHHHHhhccccHHHHhh
Confidence            432222111111112222233333333333332222111111111000001000001 1234556789999999999999


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCCCCCcccccc-cccCCCCCC---c--------
Q 000401          512 LILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSA-VLQSPGSKR---S--------  579 (1565)
Q Consensus       512 ~~l~~s~De~~~~~~L~gfq~~a~vag~l~L~~~rDafl~~L~k~t~~~~~~~~~~~~-~~~~~g~~~---~--------  579 (1565)
                      ..+.++.|+.+.+.++.+++.++..||+.+-+++..+++..||+|....+...+.... +..+|..++   +        
T Consensus       542 s~l~~st~e~is~qvl~s~stltsa~~~~~Ade~lna~~~~l~~~~~~s~r~vs~lr~l~s~Spv~gr~~~sew~~dfet  621 (1610)
T KOG1848|consen  542 STLPESTDEIISAQVLASYSTLTSACGRCSADEVLNALKEALVPFKDFSPRPVSRLRCLNSESPVVGRKMGSEWKIDFET  621 (1610)
T ss_pred             hhccccccchhhHHHHhchHHHHhccccccchhHHHHHHHhhCCcccCCccHHHHHhhccccCccccccCCcceEEEEee
Confidence            9999999999999999999999999999999999999999999999854422111000 000110000   0        


Q ss_pred             ---------------cccccccCCccCChhHHHHHHHHHHHHHhhcccccccHHHHHHHHHHhHHhhcC-CCCCcccccc
Q 000401          580 ---------------ESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHS-PHATTQEVST  643 (1565)
Q Consensus       580 ---------------~~~~~~~~~~~l~~KNi~~lraLl~lA~~lG~~L~~SW~~IL~tlq~l~~~l~~-p~~~~~~~~~  643 (1565)
                                     -.++.+..++.++.||+++.|+++++++.+-..++.+|..++.|...+|+..+. |..+.....+
T Consensus       622 w~~~t~~~~~~p~~~~~s~ss~~~v~lT~snvqa~rsf~t~~~~~~~sy~~sw~llm~t~~~ls~~~~m~p~qt~l~v~t  701 (1610)
T KOG1848|consen  622 WDKATIILNRSPTSKHLSTSSLNRVNLTNSNVQASRSFSTLMDYELVSYKNSWSLLMYTTSSLSQPAYMEPLQTLLAVIT  701 (1610)
T ss_pred             ccceeeEecCCCCCccccccCCCccccccchHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcchhhcCHHHhhHHHHh
Confidence                           001112356889999999999999999999999999999999999999998765 5444333332


Q ss_pred             cCccccccC----CCcccchhHHHHhhHhhhhhcccCCHHHHHHHHHHHHHhhhhhhcCCCCCCCCCCCCCCCceeehHH
Q 000401          644 ASSKLARES----SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVE  719 (1565)
Q Consensus       644 ~~p~~~~~~----~~~~~d~~i~~s~~~~LFesS~~l~~~a~~~fi~ALc~lS~e~i~~~~~~~~~~~~~~~~~~~F~l~  719 (1565)
                      ..+..+.+.    ..+++|+.+++++.+++|.+++.++..++..++.||.++|.+.+...........    +.-.+.++
T Consensus       702 ~~~~hp~~p~~~~~~~ynd~~~lssl~~~v~~~~a~~~~ss~~slL~ali~ls~~sli~~~~~~~ssl----r~~~~~l~  777 (1610)
T KOG1848|consen  702 SSSVHPIQPLTAPRQSYNDDLLLSSLKNSVYKTSANRSISSGISLLRALIELSYSSLILETVCSCSSL----RFLDSKLD  777 (1610)
T ss_pred             cCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhhcccccc----ccccchhh
Confidence            222222211    1346788889999999999999999999999999999999986543322111000    00001111


Q ss_pred             HhHHHHHhccccchhhHH--------------------------------------------------------------
Q 000401          720 RMISILVNNLHRVEPLWD--------------------------------------------------------------  737 (1565)
Q Consensus       720 kl~eva~~N~~Ri~~~W~--------------------------------------------------------------  737 (1565)
                      -.......|-.|....|.                                                              
T Consensus       778 v~~~~~~l~e~snq~~~~naa~~l~t~~n~vl~s~~~~~asals~da~~dv~sk~ti~~es~~~~l~sl~v~~~s~~~~e  857 (1610)
T KOG1848|consen  778 VSGWSLILKELSNQFKIINAAPELRTRANNVLASILVDVASALSNDASPDVYSKQTIFFESLGMLLPSLEVSDNSSRGVE  857 (1610)
T ss_pred             hhHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhcccccchhccceeeHhhhHHHHHHHHHHHhcCccce
Confidence            111111111111222222                                                              


Q ss_pred             ------HHHHHHHhhccccccCCcHHHHHHHHHhhhc---cchhHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHH
Q 000401          738 ------QVVGHFLERCGEKLHYSWPSILELLRSVADA---SEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYS  808 (1565)
Q Consensus       738 ------~i~~hlie~~g~~L~sgW~~If~iL~~~~~~---~~~~lv~~aF~~L~lI~~dfL~~Lp~~~~~~lV~~L~~F~  808 (1565)
                            ...-|++|++|+.+.+||+.||++|+++++.   +|+++|++||++|++|++|||++||.+|+..|||++..|+
T Consensus       858 vr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~~lidtl~~fs  937 (1610)
T KOG1848|consen  858 VRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCILDLIDTLLVFS  937 (1610)
T ss_pred             eeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHHHHHHHHHHHH
Confidence                  2234455999999999999999999998774   4889999999999999999999999999999999999999


Q ss_pred             hcCCCcchhHHHHHHHHHhHHHHHcccCCCcchhhhhhhcccCCCccccCcchhhhhhcccccccCCCCCchhhhhhHHH
Q 000401          809 SQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFA  888 (1565)
Q Consensus       809 ~q~~dlNISLtAi~llW~isD~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~LW~~  888 (1565)
                      +|++|+||||||||+||+++||+++++.  +..++....+            ..|+..+.      .+.+...++++|+.
T Consensus       938 ~QktdlNISltAi~lfWtvsDfl~~km~--S~sed~~~~~------------~~e~~~ss------~~~~~~l~e~lwi~  997 (1610)
T KOG1848|consen  938 RQKTDLNISLTAIGLFWTVSDFLKNKMF--STSEDSCAYN------------SVEDLYSS------MKSKEILPEVLWIM  997 (1610)
T ss_pred             hhhccccccHHHHHHHHHHHHHHHhhhh--ccchhhhhhc------------chhhhccc------ccchhhhhhHHHHH
Confidence            9999999999999999999999997522  2212211110            01111111      11222447899999


Q ss_pred             HHHHHHhhccCCcHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHhHHhhHHhhhhhcccCCcccccccccccCCCccc
Q 000401          889 VFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAV  968 (1565)
Q Consensus       889 LL~~L~~L~~D~R~EVRn~AiqTLfril~~~g~~ls~~~W~~~~~~VLFPLl~~l~~~~~~~s~~~~~~~~~~~~~~~~~  968 (1565)
                      ||..|+++|.|+|+||||||+||||||+.+||+.|++.+|+.|+|+|++|||+.....  +  .+||+|++         
T Consensus       998 ll~~L~~~~~dsr~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q--~--~~ewngke--------- 1064 (1610)
T KOG1848|consen  998 LLVHLADLCEDSRAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQ--N--VSEWNGKE--------- 1064 (1610)
T ss_pred             HHHHHHHHhccchHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhcccccc--c--hhhhcchh---------
Confidence            9999999999999999999999999999999999999999999999999999988532  1  35676654         


Q ss_pred             hhhcccccchhhhhHHHHHHHHHHHHHHHHhhhhcccccccchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhh
Q 000401          969 HMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSH 1048 (1565)
Q Consensus       969 ~~~v~hsr~~~~k~W~ET~vlaL~gl~~lf~~~~~~L~~l~~f~~~W~~LL~~l~~~~~~~~~els~a~~~~L~~lL~~~ 1048 (1565)
                                .||||.||.+++++|++|+|..||..|..+.+|.+.|+.+|+|+.++...++.+++.++++|||+++...
T Consensus      1065 ----------iqkqwtet~~ltisgIaklf~e~fk~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~qell~si 1134 (1610)
T KOG1848|consen 1065 ----------IQKQWTETSCLTISGIAKLFSENFKLLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKALQELLFSI 1134 (1610)
T ss_pred             ----------HhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHHHHH
Confidence                      2699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCChH---HHHHHHHHHHHhhcCCCCCCCCCCccchHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHccc
Q 000401         1049 STKGNLPVA---YLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYV--QAQKMFDDRMYGQLLAIIDLAVRQTM 1123 (1565)
Q Consensus      1049 ~~~~~~~~~---~~~~~~~~w~~i~~~~~~~~~~~~~~~~q~~l~~f~~ly~--~~~~~~~~~~~~~~l~~l~~~~~~~~ 1123 (1565)
                      ...++++..   ....++..|+.+++.++.+..++..++.||.+.+|+..|+  .+++.+..+.++..+..++.++.||.
T Consensus      1135 i~~~~ln~~~~~k~n~vf~~y~~~~~~~ssas~~t~~kv~~eiltgl~~~vqs~sk~d~~~~e~~~~slll~~kai~yp~ 1214 (1610)
T KOG1848|consen 1135 IEFGKLNATFTLKINLVFINYGRFCEVSSSASERTLAKVSQEILTGLIESVQSLSKADNFGIEEIKDSLLLVRKAIFYPE 1214 (1610)
T ss_pred             hhhccccchHHHHhhhhhhhHhhhcccccccchhHHHHHHHHHHhhhHHHHHHHHhhcchhHHHHHHHHHHhhhccccCC
Confidence            988888776   5566677888777776666666678899999999998888  45667778999999999999999998


Q ss_pred             CCCCCCccccCCCCHHHHHHHHhccccCCCccchhhHHHHHHHHHccCCCCCCcCCCCCC-CCCCCCCCCCccccccccc
Q 000401         1124 ITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKED-EEEPPSTSDNIHDVHVRTK 1202 (1565)
Q Consensus      1124 ~~~~~~~~d~~~~s~lQ~~vl~~l~~i~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~~~~ 1202 (1565)
                      ++.  +..|... ||+|.+|++.++.+.+++ ...+|..++.....+.+.++.-+..... +++.            +..
T Consensus      1215 ~~~--ft~d~hv-psvq~avls~ld~l~~~~-~~~~~lvLl~~sthltpafdt~l~~~k~~~~g~------------~~~ 1278 (1610)
T KOG1848|consen 1215 STS--FTLDVHV-PSVQLAVLSLLDLLISDK-FKLNHLVLLLWSTHLTPAFDTRLKITKKLGPGL------------PKE 1278 (1610)
T ss_pred             Cch--hhhhccC-ChHHHHHHhhcchhccCc-cccchhHHHHHhhhhhhhhhhhhhhhhccCCCC------------chh
Confidence            776  8888766 889999999999999844 4566666666666666665532211100 0000            000


Q ss_pred             cCCCCCCCCCCcchhhhhhcccCCccccchhHHHHHhHhHHHHHHhhhcchhhhcchhHHHHHhhcc-ccccCCCCCCCc
Q 000401         1203 YDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGR-CMTTRRDNPDSS 1281 (1565)
Q Consensus      1203 ~~~~~a~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~ii~~~~~-~~~~k~~~~~~~ 1281 (1565)
                      -.++-|...+    +   +      .-...+.-++++.++-....+++++.+.++--+++...-+.+ ||+.-+.+|+.|
T Consensus      1279 e~~~das~et----l---~------~~s~~t~rna~nkv~~~g~~~l~a~a~~~i~~f~ev~~rlkr~~~t~~r~npe~p 1345 (1610)
T KOG1848|consen 1279 EKTIDASLET----L---I------CLSKKTFRNAENKVENHGLDFLNAGAMQHIFEFLEVPMRLKRRCPTASRVNPELP 1345 (1610)
T ss_pred             hhcccchhhh----h---H------HhhHHHhhhchhhhchhhHHHHhhhHHHHHHhhHHHHHHHHHHcccccccCCCCc
Confidence            0000000000    0   0      001123337888887777778888888776555555444444 344447888999


Q ss_pred             cHHHHHHHHHHHHHhhhhhHhhh-----hcccccCChHHHHhhHHHHHHHHhhHhcccCC-C--CCCCCCCChhhccccc
Q 000401         1282 LWRLAVEGFNHILVDDVTKLAAN-----FWQDMKISRPARLRVWKEVADVYEIFLVGYCG-R--ALPSNSLSAVALSGAD 1353 (1565)
Q Consensus      1282 ~Wk~At~~~~~il~~~l~~~~~~-----~~~~~~~~~~~~~~~W~~v~~~~~~~l~~~~~-~--~~~~~~~~~~~~~~~d 1353 (1565)
                      +|++|..+|++..-.+.......     ....+.+...+....|++..|++++++.+.|+ +  +..+..++..... .+
T Consensus      1346 iwvlas~cF~~l~~~~fk~l~~~~~~~laet~l~lflt~~it~~rinpevd~~~~~~~cd~e~~~~ksl~l~a~~~l-~n 1424 (1610)
T KOG1848|consen 1346 IWVLASKCFVRLMINCFKDLKGSDAIELAETMLCLFLTVEITNSRINPEVDYEYVWSLCDFENSSLKSLHLLAKPHL-QN 1424 (1610)
T ss_pred             eeeeeHhhHHhhHHHHHHHhccccccchhhhhhheeeEEEeeeeeeCcchhhhhhhhhcccccchhhhhhhccchhh-HH
Confidence            99999999999887665443221     00000122234567899999999999999988 3  2233445666777 89


Q ss_pred             hhhchHHHHHhhhhccCCCCCCChHHhHhhHHHhhhccCCCCCCCccccccCccchhh--hHHHHHHHHHhhhcCCCccc
Q 000401         1354 ESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSK--FSLACLHKLFSLSSSDNEAS 1431 (1565)
Q Consensus      1354 E~~d~~~~~~l~~~il~~~~~~p~~~~~~l~~l~~~~~~r~~~~~~~t~~~~p~~r~r--~s~~c~d~Lf~l~s~~~~~~ 1431 (1565)
                      |.+++++++.++|.++.+..|.|.+.++|+++++++++.| ++.++.+.+..|+|..|  .+|.||+.||+.....    
T Consensus      1425 e~led~~i~~~~d~~l~~~~d~prn~l~rlistl~r~sqk-~ss~~fs~~~~~~hn~Rf~la~~Cf~~ll~ds~s~---- 1499 (1610)
T KOG1848|consen 1425 ECLEDEVIQYYIDLCLGSFYDQPRNTLDRLISTLNRDSQK-ASSNFFSSTESPVHNRRFRLAVDCFSILLDDSNSS---- 1499 (1610)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHh-hhccCccccccCccChhHHHHHHHHHHHHHhcchh----
Confidence            9999999999999999999999999999999999999988 77777777777777666  5666999999877531    


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHhhchhccCCCCCChhHHHHHHHHHHHHhhcccCcccccCCCCCccccccccc
Q 000401         1432 KWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAM 1511 (1565)
Q Consensus      1432 ~~~~~~~~~a~~a~p~Ll~Rc~~~L~~yi~Dq~l~G~~P~P~~r~~El~~vL~~l~~L~~~~~~~~~~~~~~~~~~~~~~ 1511 (1565)
                       .+..|..+++++.|+|..||..+|++|++||...|..|+|+.|..||+++||+|..|....      +.+|.+      
T Consensus      1500 -~~ntr~~vsk~~~p~L~aRc~~~Lsry~~Des~~G~lplpksr~~Eiit~lq~l~~l~~~L------~~np~l------ 1566 (1610)
T KOG1848|consen 1500 -YENTREKVSKTIRPILQARCCWSLSRYVADESVSGYLPLPKSREMEIITVLQCLNNLPSLL------YSNPIL------ 1566 (1610)
T ss_pred             -hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCchHHHHHHHHHHHHHHHHhhcc------ccCchh------
Confidence             2338999999999999999999999999999999999999999999999999999998873      112221      


Q ss_pred             CcCCCcccchhhhhhhhhhheecchhHHHHHHHHH
Q 000401         1512 DENSDKRPHLLVLFPSFCELVISREARVRELVQVL 1546 (1565)
Q Consensus      1512 ~~~~~~~~hL~~lyp~l~~~v~~~~~~v~~ll~~~ 1546 (1565)
                       .+..++.||..|+|.+|+.++++.+++...-|++
T Consensus      1567 -~n~~~~~hl~~lsPs~~~~~p~~h~~~~l~~qvL 1600 (1610)
T KOG1848|consen 1567 -YNLRKAYHLTNLSPSATSLNPAIHGQLTLKNQVL 1600 (1610)
T ss_pred             -hhHHHHHHHHhccHHHHhhhhhhhcccHHHHHHH
Confidence             1267899999999999999987776665554433

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>COG5307 SEC7 domain proteins [General function prediction only]	Back alignment and domain information

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins	Back alignment and domain information

>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1565
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 69.5 bits (169), Expect = 7e-12
 Identities = 101/658 (15%), Positives = 198/658 (30%), Gaps = 197/658 (29%)

Query: 195 DVSRSINHSESLEHEFASEGP--SLRR--ETLTKAGKLGL-RLLEDLTALAAGGSASWLH 249
           D+ +SI   E ++H   S+       R   TL    +  + + +E++  +      S + 
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99

Query: 250 VNTLQRTFVLDILEFI-----LSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGE 304
               Q +  +    +I     L N   +F        V R Q        LR  +     
Sbjct: 100 TEQRQPS--MMTRMYIEQRDRLYNDNQVFAKY----NVSRLQ----PYLKLRQALLE--- 146

Query: 305 TGEPYFRRLVLRSVAHIIRLYS------SSLITECEVFLSMLVKVTFLDLPLWHRI---- 354
                     LR   +++ +        + +  +  V LS  V+        W  +    
Sbjct: 147 ----------LRPAKNVL-IDGVLGSGKTWVALD--VCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 355 ---LVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESL 411
               VLE+L+           +  N+     +++ ++  + ++   +  +   +  E  L
Sbjct: 194 SPETVLEMLQKLL------YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 412 SAVAGMFSSKAKGIEWILDN--DAS-------NAAVLVASEAHSITLAIEGLLGVVFTV- 461
                           +L N  +A        +  +L+ +    +T  +        ++ 
Sbjct: 248 ---------------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 462 ---ATLT-DEAVDVGELES-PRCDYDPLPKCMGETAVLCISMVDSL----------WLTI 506
               TLT DE   +  L     C    LP+ +  T    +S++             W  +
Sbjct: 293 HHSMTLTPDEVKSL--LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350

Query: 507 -LDALSLILSRSQGEAIILEILK--GYQAFTQACGVLHAVEPLNSFLAS--LCKF----- 556
             D L+ I+  S      L +L+   Y+       V     P ++ + +  L        
Sbjct: 351 NCDKLTTIIESS------LNVLEPAEYRKMFDRLSVF----PPSAHIPTILLSLIWFDVI 400

Query: 557 ---TINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQAL-RTL---FNIAHRL 609
               + + N+  + S V + P      S+      + +  +N  AL R++   +NI    
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 610 H-NVLGPSWVLVLETLAALDRAIHSP---HATTQEVSTASSKLARESSGQYSDFNVLSSL 665
             + L P +         LD+  +S    H    E      +        + DF      
Sbjct: 460 DSDDLIPPY---------LDQYFYSHIGHHLKNIE----HPERMTLFRMVFLDFR----- 501

Query: 666 NSQLFESSALMHIS----AVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERM 721
               F    + H S    A  S+L+ L QL                   I       ER+
Sbjct: 502 ----FLEQKIRHDSTAWNASGSILNTLQQLK-------------FYKPYICDNDPKYERL 544

Query: 722 ISILVNNLHRVEPLWDQVVGHFLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQ 779
           ++ ++                FL +  E L  S                 DL+ +   
Sbjct: 545 VNAIL---------------DFLPKIEENLICS--------------KYTDLLRIALM 573

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1565
d1r8se_		187	Exchange factor ARNO {Human (Homo sapiens) [TaxId:	90.28
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	80.67

>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: Exchange factor ARNO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.056  Score=26.59  Aligned_cols=22  Identities=14%  Similarity=0.137  Sum_probs=17.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             4587601279999999987886
Q 000401          438 VLVASEAHSITLAIEGLLGVVF  459 (1565)
Q Consensus       438 ~ll~~Ea~~I~~~~e~la~~i~  459 (1565)
                      +.+|||+|.|+|+++.|++..+
T Consensus        90 f~lpgE~Q~Idrile~Fs~~y~  111 (187)
T d1r8se_          90 FRLPGKAQKIDRMMEAFAQRYC  111 (187)
T ss_dssp             SCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHH
T ss_conf             6189718999999999999999

PyMOL of d1r8se_

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure