Citrus Sinensis ID: 000470
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1472 | 2.2.26 [Sep-21-2011] | |||||||
| Q54S77 | 1966 | Probable serine/threonine | yes | no | 0.163 | 0.122 | 0.530 | 6e-70 | |
| Q99570 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.169 | 0.184 | 0.463 | 5e-65 | |
| Q5R9I3 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.167 | 0.181 | 0.462 | 2e-64 | |
| Q8VD65 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.164 | 0.178 | 0.469 | 2e-63 | |
| O42900 | 1706 | Serine/threonine-protein | yes | no | 0.143 | 0.123 | 0.532 | 4e-63 | |
| P0C0R5 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.164 | 0.178 | 0.465 | 5e-63 | |
| Q9UVG6 | 1340 | Putative serine/threonine | yes | no | 0.142 | 0.156 | 0.488 | 3e-55 | |
| P22219 | 1454 | Serine/threonine-protein | yes | no | 0.146 | 0.148 | 0.463 | 3e-55 | |
| Q9VP22 | 1157 | Cyclin-dependent kinase 1 | no | no | 0.069 | 0.089 | 0.307 | 5e-07 | |
| Q55C57 | 473 | Probable serine/threonine | no | no | 0.070 | 0.219 | 0.305 | 1e-06 |
| >sp|Q54S77|VPS15_DICDI Probable serine/threonine-protein kinase vps15 OS=Dictyostelium discoideum GN=vps15 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 172/247 (69%), Gaps = 6/247 (2%)
Query: 14 ETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
ETD++ YL+RQYF N+L DRLST PFLS++EKK++AFQLL A++Q KG+ HGDIK EN
Sbjct: 90 ETDRSGYLIRQYFHNNLYDRLSTRPFLSMIEKKFIAFQLLKALEQSSFKGVFHGDIKSEN 149
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQ 133
VLVT+ NW+YLSDFA +KPT+IP D+P+DFSF+FDT G+R CY+APERFYE
Sbjct: 150 VLVTTSNWVYLSDFACYKPTFIPEDNPADFSFYFDTSGRRTCYIAPERFYETN--RGAPS 207
Query: 134 DAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHL-EKIPDSGIRKMI 191
+ L P MDIF++GCVIAELFL+ P F+ S LL+YR+G+Y P + ++I D I+ +I
Sbjct: 208 NNELTPKMDIFSLGCVIAELFLDGFPIFDFSQLLSYRKGEYSPEPIIRQRIQDPNIQTLI 267
Query: 192 LHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEI 251
LHMIQ +P+ R++ E Y+ + VFP YFS F H F L +D RV F EI
Sbjct: 268 LHMIQKDPDQRYTPEKYISKWNT-VFPQYFS-FAHQFIPELMRLENDDRVMCISDKFDEI 325
Query: 252 LKQMMGN 258
+ N
Sbjct: 326 VDIFKNN 332
|
Dictyostelium discoideum (taxid: 44689) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q99570|PI3R4_HUMAN Phosphoinositide 3-kinase regulatory subunit 4 OS=Homo sapiens GN=PIK3R4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 170/272 (62%), Gaps = 22/272 (8%)
Query: 13 QETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
+ ++KAA L RQY ++L DR+ST PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK E
Sbjct: 93 KASEKAAMLFRQYVRDNLYDRISTRPFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTE 152
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEM 129
NV+VTSWNW+ L+DFASFKPTY+P D+P+DF++FFDT +R CY+APERF + G E+
Sbjct: 153 NVMVTSWNWVLLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVDGGMFATEL 212
Query: 130 QVAQD---------------APLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQY 173
+ +D LK +MDIF+ GCVIAELF E VP F+LS LLAYR G +
Sbjct: 213 EYMRDPSTPLVDLNSNQRTRGELKRAMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHF 272
Query: 174 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWN 233
P Q L KI D IR+++ MI EP+ R AE YL+ FP F FL + +
Sbjct: 273 FPEQVLNKIEDHSIRELVTQMIHREPDKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFA 332
Query: 234 P---LHSDMRVAMCRSVFPEILKQMMGNKSSE 262
L +D R+ + R I+ + G+ E
Sbjct: 333 KETFLSADERILVIRKDLGNIIHNLCGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q5R9I3|PI3R4_PONAB Phosphoinositide 3-kinase regulatory subunit 4 OS=Pongo abelii GN=PIK3R4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 168/268 (62%), Gaps = 22/268 (8%)
Query: 13 QETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
+ ++KAA L RQY ++L DR+ST PFL+ +E +W+AFQ+L AV Q H+ G+ HGDIK E
Sbjct: 93 KASEKAAMLFRQYVRDNLYDRISTRPFLNNIENRWIAFQILTAVDQAHKPGVRHGDIKTE 152
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEM 129
NV+VTSWNW+ L+DFASFKPTY+P D+P+DF++FFDT +R CY+APERF + G E+
Sbjct: 153 NVMVTSWNWVLLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVDGGMFATEL 212
Query: 130 QVAQD---------------APLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQY 173
+ +D LK +MDIF+ GCVIAELF E VP F+LS LLAYR G +
Sbjct: 213 EYMRDPSTPLVDLNSNQRTRGELKRAMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHF 272
Query: 174 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWN 233
P Q L KI D IR+++ MI EP+ R AE YL+ FP F FL + +
Sbjct: 273 FPEQVLNKIEDHSIRELVTQMIHREPDKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFA 332
Query: 234 P---LHSDMRVAMCRSVFPEILKQMMGN 258
L +D R+ + R I+ + G+
Sbjct: 333 KETFLSADERILVIRKDLGNIIHNLCGH 360
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VD65|PI3R4_MOUSE Phosphoinositide 3-kinase regulatory subunit 4 OS=Mus musculus GN=Pik3r4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 163/264 (61%), Gaps = 22/264 (8%)
Query: 21 LLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80
L RQY ++L DR+ST PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWN
Sbjct: 101 LFRQYVRDNLYDRISTRPFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWN 160
Query: 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD--- 134
W+ L+DFASFKPTY+P D+P+DF++FFDT +R CY+APERF + G E++ +D
Sbjct: 161 WVLLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPST 220
Query: 135 ------------APLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEK 181
LK +MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L K
Sbjct: 221 PLVDLNSNQRARGELKRAMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNK 280
Query: 182 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSD 238
I D IR ++ MI EPE R AE YL+ FP F FL + + L +D
Sbjct: 281 IEDRSIRDLVTQMINREPEKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSAD 340
Query: 239 MRVAMCRSVFPEILKQMMGNKSSE 262
R+ + R I+ + G+ E
Sbjct: 341 ERILVIRKDLGNIIHNLCGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O42900|PPK19_SCHPO Serine/threonine-protein kinase ppk19 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk19 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 148/218 (67%), Gaps = 7/218 (3%)
Query: 15 TDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74
T +AAYL+R Y ++L DR+ST PFL L EKKW+ FQLL + CH G+CHGDIK EN+
Sbjct: 93 TLRAAYLVRPYVTHNLYDRISTRPFLELTEKKWIMFQLLKGISDCHRLGVCHGDIKSENI 152
Query: 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQD 134
L+TSWNW YLSDF+SFKPTY+P D+P+D+ +FFDT +R+C +APERF Q
Sbjct: 153 LITSWNWAYLSDFSSFKPTYLPEDNPADYGYFFDTSSRRVCNIAPERFVPASQ----LQP 208
Query: 135 APLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMIL 192
APL P+MDIF++GCV AEL L E P F LS L +Y+ G YD LE+I D + MIL
Sbjct: 209 APLSPAMDIFSLGCVFAELLLEESPLFTLSQLFSYKAHGSYDLQSVLEQIEDKSTQNMIL 268
Query: 193 HMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYC 230
M+ +P R SA++YLQ Y VFP F L++ YC
Sbjct: 269 SMLDRDPSQRLSADAYLQKYRGTVFPACFYDTLYD-YC 305
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P0C0R5|PI3R4_RAT Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus GN=Pik3r4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 164/264 (62%), Gaps = 22/264 (8%)
Query: 21 LLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80
L RQY ++L DR+ST PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWN
Sbjct: 101 LFRQYVRDNLYDRISTRPFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWN 160
Query: 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD--- 134
W+ L+DFASFKPTY+P D+P+DF++FFDT +R CY+APERF + G E++ +D
Sbjct: 161 WVLLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPST 220
Query: 135 ------------APLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEK 181
LK +MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L K
Sbjct: 221 PLVDLNSNQRTRGELKRAMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNK 280
Query: 182 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSD 238
I D IR+++ MIQ EP R A+ YL+ FP F FL + + L +D
Sbjct: 281 IEDRSIRELVTQMIQREPGQRLEADDYLKQQRGNAFPEVFYTFLQPYMAQFAKETFLSAD 340
Query: 239 MRVAMCRSVFPEILKQMMGNKSSE 262
R+ + R I+ + G+ E
Sbjct: 341 ERILVIRKDLGNIIHNLCGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9UVG6|VPS15_PICPA Putative serine/threonine-protein kinase VPS15 OS=Komagataella pastoris GN=VPS15 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 3/213 (1%)
Query: 17 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76
+A YL+R + +L +R+S P+L +EKKW+AFQL+ AV +CHE+G HGDIK ENVL+
Sbjct: 96 RAGYLIRPFQQRTLYERVSIQPYLEPIEKKWIAFQLIHAVMECHERGQYHGDIKSENVLL 155
Query: 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 136
TSW+ ++L+DFA FKP Y+P ++PS FSF+FDT + +CY+APERF G Q +
Sbjct: 156 TSWDMVFLTDFAPFKPIYLPGNNPSQFSFYFDTSRRNVCYVAPERFLGEGTPTQYQEVDK 215
Query: 137 LKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMI 195
L SMDIF++GC +AELFLE F L L Y++G+Y PS L I D+ +R MI MI
Sbjct: 216 LTSSMDIFSLGCTVAELFLEGSVLFTLPQLFKYKKGEYTPS--LSGIVDNDLRNMIQEMI 273
Query: 196 QLEPELRFSAESYLQNYAAVVFPTYFSPFLHNF 228
L+P R SA L+ + VFP YF FL+++
Sbjct: 274 DLDPRKRISAHDCLRKHRGKVFPEYFYSFLYDY 306
|
Involved in glucose-induced micropexophagy and ethanol-induced macropexophagy. Required for ATG2 recruitment to a perivacuolar compartment. Pichia pastoris (taxid: 4922) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P22219|VPS15_YEAST Serine/threonine-protein kinase VPS15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS15 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 4/220 (1%)
Query: 14 ETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
ET++A Y++RQ+ N+L DRLS P+L +E K++AFQLL A+K H I HGDIK EN
Sbjct: 93 ETNRAGYMIRQHLKNNLYDRLSLRPYLQDIELKFIAFQLLNALKDIHNLNIVHGDIKTEN 152
Query: 74 VLVTSWNWLYLSDFASF-KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVA 132
+LVTSWNW L+DFA+F KP Y+P D+P +F F+FDT +R CYLAPERF + +
Sbjct: 153 ILVTSWNWCILTDFAAFIKPVYLPEDNPGEFLFYFDTSKRRTCYLAPERFNSKLYQDGKS 212
Query: 133 QDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQH--LEKIPDSGIRK 189
+ L MDIF++GCVIAE+F E P F LS L Y+ YD ++ +E++ + +R
Sbjct: 213 NNGRLTKEMDIFSLGCVIAEIFAEGRPIFNLSQLFKYKSNSYDVNREFLMEEMNSTDLRN 272
Query: 190 MILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFY 229
++L MIQL+P R S + L Y + FP YF F+++++
Sbjct: 273 LVLDMIQLDPSKRLSCDELLNKYRGIFFPDYFYTFIYDYF 312
|
Serine/threonine-protein kinase required for cytoplasm to vacuole transport (Cvt) and autophagy as a part of the autophagy-specific VPS34 PI3-kinase complex I. This complex is essential to recruit the ATG8-phosphatidylinositol conjugate and the ATG12-ATG5 conjugate to the pre-autophagosomal structure. Is also involved in endosome-to-Golgi retrograde transport as part of the VPS34 PI3-kinase complex II. This second complex is required for the endosome-to-Golgi retrieval of PEP1 and KEX2, and the recruitment of VPS5 and VPS7, two components of the retromer complex, to endosomal membranes (probably through the synthesis of a specific pool of phosphatidylinositol 3-phosphate recruiting the retromer to the endosomes). By regulating VPS34 kinase activity, VPS15 appears to be essential for the efficient delivery of soluble hydrolases to the yeast vacuole. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9VP22|CDK12_DROME Cyclin-dependent kinase 12 OS=Drosophila melanogaster GN=Cdk12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
QLL + CH+K H DIKC N+L+ + + L+DF + Y D ++ T
Sbjct: 919 QLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLAR-LYNADDRERPYTNKVIT- 976
Query: 111 GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA 167
L Y PE GE + PS+D+++ GC++ ELF++ P F+ + +A
Sbjct: 977 ---LWYRPPELLL---GEERYG------PSIDVWSCGCILGELFVKRPLFQANAEMA 1021
|
Cyclin-dependent kinase which displays CTD kinase activity: hyperphosphorylates the C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit, thereby acting as a key regulator of transcription elongation. Drosophila melanogaster (taxid: 7227) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q55C57|GLKA_DICDI Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 40 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 99
LS+ K L +QL A+K H K ICH DI N+L++S L L+DF S K
Sbjct: 180 LSINFIKVLFYQLCQAIKHIHSKAICHRDITPNNILLSSKGELTLADFGSAK-------- 231
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159
++ + Y+ R+Y E+ V + +DI+++GC++AE+ + P
Sbjct: 232 ------ILESNHTSMSYIC-SRYYR-APELLVGC-SNYTTKIDIWSIGCILAEMLIGKPL 282
Query: 160 F 160
F
Sbjct: 283 F 283
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1472 | ||||||
| 255546297 | 1455 | ATP binding protein, putative [Ricinus c | 0.925 | 0.936 | 0.751 | 0.0 | |
| 359484532 | 1455 | PREDICTED: phosphoinositide 3-kinase reg | 0.925 | 0.936 | 0.758 | 0.0 | |
| 356497575 | 1521 | PREDICTED: phosphoinositide 3-kinase reg | 0.969 | 0.938 | 0.750 | 0.0 | |
| 356520822 | 1488 | PREDICTED: phosphoinositide 3-kinase reg | 0.948 | 0.938 | 0.743 | 0.0 | |
| 449435788 | 1445 | PREDICTED: phosphoinositide 3-kinase reg | 0.919 | 0.936 | 0.716 | 0.0 | |
| 449489804 | 1445 | PREDICTED: LOW QUALITY PROTEIN: phosphoi | 0.919 | 0.936 | 0.715 | 0.0 | |
| 297803098 | 1494 | kinase family protein [Arabidopsis lyrat | 0.952 | 0.938 | 0.698 | 0.0 | |
| 15233564 | 1494 | phosphoinositide-3-kinase, regulatory su | 0.952 | 0.938 | 0.702 | 0.0 | |
| 224088049 | 1209 | predicted protein [Populus trichocarpa] | 0.820 | 0.999 | 0.755 | 0.0 | |
| 297738742 | 1349 | unnamed protein product [Vitis vinifera] | 0.647 | 0.706 | 0.750 | 0.0 |
| >gi|255546297|ref|XP_002514208.1| ATP binding protein, putative [Ricinus communis] gi|223546664|gb|EEF48162.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2217 bits (5744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1101/1465 (75%), Positives = 1214/1465 (82%), Gaps = 102/1465 (6%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FWQETDKAAYLLRQ+FFN+L DRLST PFLS VEKKWLAFQLLLAVKQCHEKGICHGDI
Sbjct: 91 QFWQETDKAAYLLRQFFFNNLHDRLSTRPFLSPVEKKWLAFQLLLAVKQCHEKGICHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVLVTSWNWLYL+DFASFKPTYIPYDDPSDFSFFFDTGG+RLCYLAPERFYEHGGEM
Sbjct: 151 KCENVLVTSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEM 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QV+QDAPLKPSMDIFAVGCVIAELFLE FELS LLAYRRGQYDPSQ+LEKIPDSGIR
Sbjct: 211 QVSQDAPLKPSMDIFAVGCVIAELFLEGQQLFELSQLLAYRRGQYDPSQNLEKIPDSGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPE R SAE YL NYA+VVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF
Sbjct: 271 KMILHMIQLEPEARLSAEGYLLNYASVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
EILKQMM NK+ E+ +G+ + + M K ++ V KQNL+L K KRE+ EKG V+
Sbjct: 331 HEILKQMMSNKTDEETVTGLCSSANCMGAKPVEDIVEKQNLDLTKDS-TKREKTEKGLVR 389
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
++++LLGDI+TL+GD K+S +K PE NS FSQD+ +++S G+LLQ+IS+AF
Sbjct: 390 DQYKLLGDINTLLGDVKQSTD--YMKLTPESATNSAFSQDIEQCAMQSPGKLLQAISNAF 447
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
+KN HPFLKKITM++L+ LMSEYDSQSDTFG+PFLP PED+MKCEG+VLIASLLCSC+RN
Sbjct: 448 QKNDHPFLKKITMDDLTLLMSEYDSQSDTFGIPFLPTPEDNMKCEGMVLIASLLCSCIRN 507
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RR AILLLKSSSL+IDDEDRLQRVLP+VIAMLSDPAAIVR AALE+LCDILP V
Sbjct: 508 VKLPHLRRGAILLLKSSSLYIDDEDRLQRVLPYVIAMLSDPAAIVRSAALESLCDILPFV 567
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFL+HSI LSEAGV
Sbjct: 568 RDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGV 627
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LD+++ KS +SS+ETS QLQ++ D QL+QLRKSIAEVVQELVMGPKQTP+IRRALLQ
Sbjct: 628 LDEMNLARKSLASSSETSRQLQKVKNDSQLAQLRKSIAEVVQELVMGPKQTPNIRRALLQ 687
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIG LC FFGQRQSNDFLLPILPAFLNDRDEQLRA+F+GQI+YVCFFVG+RSVEEYLLPY
Sbjct: 688 DIGKLCYFFGQRQSNDFLLPILPAFLNDRDEQLRALFFGQIIYVCFFVGQRSVEEYLLPY 747
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQALSD TEAV+VNALDCLA+LCK G+LRKRILLEMIE AFPLLCYPSQWVRRS V FI
Sbjct: 748 IEQALSDQTEAVVVNALDCLAVLCKRGFLRKRILLEMIEHAFPLLCYPSQWVRRSAVAFI 807
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSESLGAVDSYVFLAPVIRPFLRRQPASLAS K+LL CLK P S++VF +VLE ARSS
Sbjct: 808 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASEKSLLLCLKSPFSKQVFSEVLEKARSS 867
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWYN+S+QSK ETAD+L+R +L SIK W DK
Sbjct: 868 DMLERQRKIWYNSSAQSKHWETADVLQREDGELHSIKSWSDK------------------ 909
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
KL+ KL FSG+MS Q+ GVNS DKSSE
Sbjct: 910 ----------KLK----------------------KLQFSGYMSPQIGGVNSFIHDKSSE 937
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFSMD+RA P ASDS L++NSLGI
Sbjct: 938 GIPLYSFSMDRRAAKISPAASDSSLRMNSLGI---------------------------- 969
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
E RENDQ A V+ KF EMG SG KG S+ VEDAS+ DLT
Sbjct: 970 -------------------ESRENDQTAYVSNKFQEMGISGGTKGGSLTVEDASASTDLT 1010
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
GLPSF RT S+PDSGWRPRG+LVAHLQEH SAVN+IAIS+DHS FVSASDDSTVKVWDSR
Sbjct: 1011 GLPSFARTISVPDSGWRPRGVLVAHLQEHRSAVNDIAISNDHSLFVSASDDSTVKVWDSR 1070
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTYHLEGSRALC++MLR+ +QVVVG CDG++H+FSVDHISRGLGN VEK
Sbjct: 1071 KLEKDISFRSRLTYHLEGSRALCSVMLRNFSQVVVGGCDGMMHVFSVDHISRGLGNVVEK 1130
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI+DIKKKD KEGAI++L+NY DN AS + MYSTQNCGIHLWD R+N N WTLKA+P
Sbjct: 1131 YSGIADIKKKDVKEGAILSLLNYTADNSASQIVMYSTQNCGIHLWDIRANVNAWTLKAVP 1190
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL+PVNSWQYS VCPIEKMCLFVPP N
Sbjct: 1191 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLVCPIEKMCLFVPPSNV 1250
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
AVS+ ARPLIYVAAGCNEVSLWNAENGSCHQVLR ANYD D EMSD+PWA ARPS + N
Sbjct: 1251 AVSSAARPLIYVAAGCNEVSLWNAENGSCHQVLRLANYDNDAEMSDMPWALARPSGKVNF 1310
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
K D RR VN KYRVDELN+PPPRLLGIRS+LPLPGGDLLTGGTDLKIRRWDH SP +SYC
Sbjct: 1311 KPDTRRKVNPKYRVDELNDPPPRLLGIRSMLPLPGGDLLTGGTDLKIRRWDHFSPKQSYC 1370
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGPNL GVG+D+ YE RSS GVQ+VQE K + L + +TAKAV+AAAATDSAGCHRDSIL
Sbjct: 1371 ICGPNLNGVGSDDSYEIRSSYGVQIVQETKGRHLNNTMTAKAVIAAAATDSAGCHRDSIL 1430
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1431 SLASVKLNQRLLISSSRDGAIKVWK 1455
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484532|ref|XP_002280317.2| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2212 bits (5733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1111/1465 (75%), Positives = 1218/1465 (83%), Gaps = 102/1465 (6%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FW ETDKAAYLLRQYFFN+L DRLST PFLSL+EKKWLAFQLL AVKQ HE G+CHGDI
Sbjct: 91 QFWIETDKAAYLLRQYFFNNLHDRLSTRPFLSLIEKKWLAFQLLCAVKQSHENGVCHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVLVTSWNWLYL+DFASFKPTYIP DDPSDFSFFFDTGG+RLCYLAPERFYE GGEM
Sbjct: 151 KCENVLVTSWNWLYLADFASFKPTYIPDDDPSDFSFFFDTGGRRLCYLAPERFYEPGGEM 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QVAQ APL+PSMDIFAVGCV+AELFLE P FELS LLAYRRGQYDPSQHLEKIPDSGIR
Sbjct: 211 QVAQGAPLRPSMDIFAVGCVVAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDSGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQL+PE RFSAESYLQNYA+++FP+YFSPFLHNFY C NPL SD RVA+C+S+F
Sbjct: 271 KMILHMIQLDPESRFSAESYLQNYASILFPSYFSPFLHNFYSCLNPLDSDTRVAVCQSLF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
EI KQMM N S+E + + TP A K S++ V KQ LNL K +++E EKG +
Sbjct: 331 HEIHKQMMSNASAEVTSAELSTPLNATGCKPSKQVVAKQKLNLTKNS-SRKQENEKGLIH 389
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
N+F LLGDI++L+ D K+SN S VK + ED PNS+ +NS +S G L+++IS+ F
Sbjct: 390 NQFELLGDINSLLKDVKQSNNYSGVKSVVEDAPNSSH----QNSGKDSPGRLVETISNVF 445
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
+KN +P LKKITM++L++LMSEYDSQSDTFGMPFLPLP+D M CEG+VLIASLLCSC+RN
Sbjct: 446 KKNDYPLLKKITMDDLNTLMSEYDSQSDTFGMPFLPLPQDCMSCEGMVLIASLLCSCIRN 505
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RR AILLLKS SL+IDDEDRLQRVLP+VIAMLSDP AIVRCAALETLCDILPLV
Sbjct: 506 VKLPHLRRGAILLLKSCSLYIDDEDRLQRVLPYVIAMLSDPVAIVRCAALETLCDILPLV 565
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSMLPDDPEESVRICYA +I++LALTAYGFL+HS+ LSEAGV
Sbjct: 566 RDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYARSISRLALTAYGFLIHSLSLSEAGV 625
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LD+L++ KS + S ETS +LQ+ QL+QLRKSIAEVVQELVMGPKQTP+IRRALLQ
Sbjct: 626 LDELNSQQKSLAPSTETSGRLQK----TQLAQLRKSIAEVVQELVMGPKQTPNIRRALLQ 681
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIGNLC FFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG+RSVEEYLLPY
Sbjct: 682 DIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGQRSVEEYLLPY 741
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQALSDATEAVIVNALDCLA+LCKSG+LRKRILLEMI AFPLLCYPSQWVRRS VTFI
Sbjct: 742 IEQALSDATEAVIVNALDCLAVLCKSGFLRKRILLEMIAHAFPLLCYPSQWVRRSAVTFI 801
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE+LGAVDSYVFLAPVIRPFLRRQPASLAS KALLSCLKPPVSR+VFY+VLENARSS
Sbjct: 802 AASSENLGAVDSYVFLAPVIRPFLRRQPASLASEKALLSCLKPPVSRQVFYEVLENARSS 861
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWYN+S Q KQ ET DL +RGAE+L+ +K PD Q++ E
Sbjct: 862 DMLERQRKIWYNSSVQPKQWETVDLHRRGAEELNLMKSLPDGQRALE------------- 908
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
L FSGFM+ Q+ GVNS CDKSSE
Sbjct: 909 ------------------------------------LQFSGFMTPQIGGVNSFICDKSSE 932
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFSMDKRA G P ASDS LQ+NSLG
Sbjct: 933 GIPLYSFSMDKRAAGVPPAASDSSLQLNSLGT---------------------------- 964
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
VVHEPE RENDQ A VN KF +MG SGT+KGSSI VED+SS D+T
Sbjct: 965 --------------VVHEPESRENDQTAYVNSKFQDMGISGTSKGSSITVEDSSSSTDIT 1010
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
GLPSF RTSSIPD GWRPRG+LVAHLQEH SAVN+IAIS DHSFFVSASDDSTVKVWDSR
Sbjct: 1011 GLPSFARTSSIPDMGWRPRGVLVAHLQEHRSAVNDIAISTDHSFFVSASDDSTVKVWDSR 1070
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTY LEGSRALCT MLR+SAQV+VGACDGIIHMFSVD+ISRGLGN VEK
Sbjct: 1071 KLEKDISFRSRLTYPLEGSRALCTAMLRNSAQVIVGACDGIIHMFSVDYISRGLGNVVEK 1130
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI+DIKKKD EGAI++L+NY D S M MYSTQNCGIHLWDTR+NSN WTLKAIP
Sbjct: 1131 YSGIADIKKKDVGEGAILSLLNYCADGSPSQMVMYSTQNCGIHLWDTRTNSNAWTLKAIP 1190
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS VCPIE++CLFVPPPNA
Sbjct: 1191 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSLVCPIEEICLFVPPPNA 1250
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+VST ARPLIYVAAGCNEVSLWNAENGSCHQVLR AN + D EMSDLPWA ARPSS+SN
Sbjct: 1251 SVSTMARPLIYVAAGCNEVSLWNAENGSCHQVLRVANNESDAEMSDLPWALARPSSKSNS 1310
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
K D+RRNVN KYRVDELNEP RL GIRSLLPLPGGDLLTGGTDLKIRRWDH SP RSYC
Sbjct: 1311 KPDIRRNVNPKYRVDELNEPASRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYC 1370
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGP +KGVGND+F+ET+SS GVQVVQE KR+PL +KLT+KAVLAAAATDSAGCHRDS+L
Sbjct: 1371 ICGPTIKGVGNDDFFETKSSFGVQVVQETKRRPLATKLTSKAVLAAAATDSAGCHRDSVL 1430
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1431 SLASVKLNQRLLISSSRDGAIKVWK 1455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497575|ref|XP_003517635.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2167 bits (5614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1089/1451 (75%), Positives = 1225/1451 (84%), Gaps = 24/1451 (1%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FWQETDKAAYLLRQ+FF++L DRLST PFLSLVEKKWLAFQLL+AVKQCHE G+CHGDI
Sbjct: 91 QFWQETDKAAYLLRQFFFHNLHDRLSTRPFLSLVEKKWLAFQLLVAVKQCHENGVCHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVL+TS NWLYL+DFASFKPTYIPYDDPSDFSFFFDTGG+RLCYLAPERFYEHGGEM
Sbjct: 151 KCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEM 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QVAQD PLKP MDIFAVGCV+AELFLE P FELS LLAYRRGQYDPSQHLEKIPD GIR
Sbjct: 211 QVAQDTPLKPYMDIFAVGCVVAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDLGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPE RFSAE YL+ YAAVVFP YFSPFLH+FY CW+PLHSDMRV +C+S F
Sbjct: 271 KMILHMIQLEPESRFSAERYLKEYAAVVFPIYFSPFLHDFYRCWSPLHSDMRVLLCQSAF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
PEILKQMM NKS +D G G M KES ++ L KRE++ KG V
Sbjct: 331 PEILKQMMNNKSYDDAGVNSGELLENMVAKES--------VSFMNDSLMKREDIGKGLVH 382
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
+ + LLGDI++L+ D K++N S+V E+ NSTF ++L+N +G+LLQ+IS+AF
Sbjct: 383 DHYELLGDINSLLRDAKKNNNQSHVA---ENAHNSTFPENLKNLQ---TGKLLQTISNAF 436
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
R N HPFLK +TMN+L+SLMSEYDSQSDTFGMPFLPLP+DSM+CEG+VLI SLLCSC+RN
Sbjct: 437 RGNDHPFLKSVTMNDLNSLMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRN 496
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RRAA+LLLK+S+L+IDDEDRLQRV+P+VI MLSD AAIVRCAALETLCDILPLV
Sbjct: 497 VKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIVMLSDSAAIVRCAALETLCDILPLV 556
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFL+HSI LSEAGV
Sbjct: 557 RDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSICLSEAGV 616
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LD+LS+P K +SS +S +L+R+N D QL QLRKSIAEVVQELVMGPKQTP+IRRALLQ
Sbjct: 617 LDELSSPQKPLTSSTHSSGRLKRINGDAQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQ 676
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIG LC FFG RQSND LLPILPAFLNDRDEQLR VFY +IVYVCFFVG+RSVEEYLLPY
Sbjct: 677 DIGKLCCFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPY 736
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQALSD TEAVIV A++C+ ILCKSG+ RKRILL+MIERAFPLLCYPS+WVRRSVV+FI
Sbjct: 737 IEQALSDVTEAVIVKAVECMTILCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVSFI 796
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE+LGAVDSYVFLAPVIRPFLRRQP SLAS KALLSCLKPPVSR+VF++VLEN+RSS
Sbjct: 797 AASSENLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFFEVLENSRSS 856
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWY +SSQSK E DLLK+G ++L S+K W DKQQ + G +QP
Sbjct: 857 DMLERQRKIWY-SSSQSKLWEI-DLLKKGIDELDSLKNWSDKQQGHGVQQTVGTAFQQPG 914
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
D + AKLR +G+ ++N S+ RD C EKL FSGFMS SG+NSL +K SE
Sbjct: 915 ITGCDKAE-AKLRDMGAFMHNDSNNVVHRDTQCSEKLQFSGFMSPHFSGMNSLTYEKPSE 973
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFS+D+R MG P ASD L +NSLG+ SS MPW++ ++SF+LA+SVP P L S
Sbjct: 974 GIPLYSFSVDRRGMGIPPAASDPPLPMNSLGVSSSAMPWVNPLSKSFNLANSVPAPKLFS 1033
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
GSFSISNGSKQF+RVVHEPE REN + A VN F ++G S KG+SI +EDA+S DL+
Sbjct: 1034 GSFSISNGSKQFHRVVHEPEAREN-ETAYVNNTFQDVGLSANIKGTSIALEDATSQTDLS 1092
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
G PSF R +SIPDSGWRPRG+LVAHLQEH SAVN+IAIS DHSFFVSASDDSTVK+WDSR
Sbjct: 1093 GFPSFAR-ASIPDSGWRPRGVLVAHLQEHLSAVNDIAISADHSFFVSASDDSTVKIWDSR 1151
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRS+LTYH+EGSR LC ML SAQV++GA DG IHMFSVDHISRGLGN VEK
Sbjct: 1152 KLEKDISFRSKLTYHMEGSRVLCATMLPGSAQVIIGASDGFIHMFSVDHISRGLGNVVEK 1211
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI+DI KKD KEGAI+ L+N DN + MYSTQNCGIHLWDTRSNSNTWTLKA P
Sbjct: 1212 YSGIADITKKDIKEGAILNLLNCPVDN---YTIMYSTQNCGIHLWDTRSNSNTWTLKATP 1268
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGY SSL +GPCGNWFVSGSSRGV+TLWDLRFL+PVNSWQYS CPIEKM LF+PP NA
Sbjct: 1269 EEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWQYSLACPIEKMRLFLPPSNA 1328
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+VS+ ARPL+YVAAGCNEVSLWNAEN SCHQVLRTANYD D EMSDLPWA ARPSS+
Sbjct: 1329 SVSSAARPLVYVAAGCNEVSLWNAENASCHQVLRTANYDSDAEMSDLPWALARPSSKPTS 1388
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
++DLRRNVN+KY VDELNEPPPRL GIRSLLPLPGGDLLTGGTDLKIRRWDH SP RSYC
Sbjct: 1389 QSDLRRNVNRKYGVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYC 1448
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGPNLKG+GND+FYET+SS GVQVVQE KR+PLT KLTAKA+LAAAATDS +R I
Sbjct: 1449 ICGPNLKGIGNDDFYETKSSFGVQVVQETKRRPLTIKLTAKAILAAAATDSGIMNRGIIG 1508
Query: 1448 SLGSVKLNQRL 1458
S + N L
Sbjct: 1509 SFIDIIFNLTL 1519
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520822|ref|XP_003529059.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2161 bits (5599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1089/1465 (74%), Positives = 1222/1465 (83%), Gaps = 69/1465 (4%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FWQETDKAAYLLRQYFF++L DRLST PFLSL+EKKWLAFQLL+AVKQCHE G+CHGDI
Sbjct: 91 QFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLIEKKWLAFQLLVAVKQCHENGVCHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVL+TS NW+YL+DFASFKPTYIPYDDPSDFSFFFDTGG+RLCYLAPERFYEHGGEM
Sbjct: 151 KCENVLITSTNWVYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEM 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QVAQD PLKP MDIFAVGCVIAELFLE P FELS LLAYRRGQYDPSQHLEKIPD GIR
Sbjct: 211 QVAQDTPLKPYMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDLGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPE R SAE YL+ YAAVVFP YFSPFLH+FY CW+PLHSDMRV +C+S F
Sbjct: 271 KMILHMIQLEPEFRLSAERYLKEYAAVVFPIYFSPFLHDFYRCWSPLHSDMRVLLCQSAF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
PEILKQMM NKSS+D G +N A+ L EEM
Sbjct: 331 PEILKQMMNNKSSDDAG-----------------------VNSAELL----EEMV----- 358
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
KES + ++ NSTF ++L+N +G+LLQ+IS+AF
Sbjct: 359 ---------------AKESAKNAH---------NSTFPENLKNLQ---TGKLLQTISNAF 391
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
R N HPFLK ITMN+L+SLMSEYDSQSDTFGMPFLPLP+DSM+CEG+VLI SLLCSC+RN
Sbjct: 392 RGNDHPFLKSITMNDLNSLMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRN 451
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RRAA+LLLK+S+L+IDDEDRLQRV+P+VI MLSD AAIVRCAALETLCDILPLV
Sbjct: 452 VKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIVMLSDSAAIVRCAALETLCDILPLV 511
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFL+ SI LSEAGV
Sbjct: 512 RDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIRSISLSEAGV 571
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LD+LS P K +SS +TS +++R+N D QL QLRKSIAEVVQELVMGPKQTP+IRRALLQ
Sbjct: 572 LDELSLPQKPLTSSTQTSGRMKRINGDAQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQ 631
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIG LC FFG RQSND LLPILPAFLNDRDEQLR VFY +IVYVCFFVG+RSVEEYLLPY
Sbjct: 632 DIGKLCCFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPY 691
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQALSD TEAVIV A++C+ ILCKSG+ RKRILL+MIERAFPLLCYPS+WVRRSVV+FI
Sbjct: 692 IEQALSDVTEAVIVKAVECMTILCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVSFI 751
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE+LGAVDSYVFLAPVIRPFLR QP SLAS KALLSCLKPPVSR+VFY+VLEN+RSS
Sbjct: 752 AASSENLGAVDSYVFLAPVIRPFLRTQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSS 811
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWY +SSQSK E DLLK+G ++L S+K W DKQQ + G +QP
Sbjct: 812 DMLERQRKIWY-SSSQSKLWEM-DLLKKGIDELDSLKNWTDKQQGPGVQQTVGTAFQQPG 869
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
D + AKLR +G+ ++N S+ RD C EKL FSGFMS SG+NSL +K SE
Sbjct: 870 ITDCDKAE-AKLRDMGAFMHNDSNTVGHRDTQCSEKLQFSGFMSPHFSGMNSLTYEKPSE 928
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFS+D+R MG ASD L +NSLG+ SS MPW++ ++SF+LA+SVP P L S
Sbjct: 929 GIPLYSFSVDRRGMGIPSAASDPPLPMNSLGVSSSAMPWVNPLSKSFNLANSVPAPKLFS 988
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
GS+SISNGSKQF+RVVHEP+ REN + A VN F ++G S KG+SI +EDA++ DL+
Sbjct: 989 GSYSISNGSKQFHRVVHEPDAREN-ETAYVNNTFQDVGLSANIKGTSIALEDATAQTDLS 1047
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
G PSF R +SIPDSGWRPRG+LVAHLQEH SAVN+IAIS DHSFFVSASDDSTVK+WDSR
Sbjct: 1048 GFPSFAR-ASIPDSGWRPRGVLVAHLQEHRSAVNDIAISADHSFFVSASDDSTVKIWDSR 1106
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRS+LTYH+EGSR LC ML SAQV++GA DG IHMFSVDHISRGLGN VEK
Sbjct: 1107 KLEKDISFRSKLTYHMEGSRVLCATMLPGSAQVIIGASDGFIHMFSVDHISRGLGNVVEK 1166
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI+DI KKD KEGAI+ L+N DN + MYSTQNCGIHLWDTRSNSNTWTL+A P
Sbjct: 1167 YSGIADITKKDIKEGAILNLLNCPVDN---YTIMYSTQNCGIHLWDTRSNSNTWTLQATP 1223
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
+EGY SSL +GPCGNWFVSGSSRGV+TLWDLRFL+PVNSWQYS CPIEKMCLF+PP NA
Sbjct: 1224 KEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWQYSLACPIEKMCLFLPPSNA 1283
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+VS+ ARPL+YVAAGCNE+SLWNAEN SCHQVLR NYD D EMSDLPWA ARPSS+
Sbjct: 1284 SVSSAARPLVYVAAGCNEISLWNAENASCHQVLRMTNYDSDAEMSDLPWALARPSSKPTS 1343
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
++DLRRN N+KY VDELNEPPPRL GIRSLLPLPGGDLLTGGTDLKIRRWDH SP RSYC
Sbjct: 1344 QSDLRRNGNRKYGVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYC 1403
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGPNLKG+GND+FYET+SS GVQVVQE KR+PLT KLTAKA+LAAAATDSAGCHRDSI+
Sbjct: 1404 ICGPNLKGIGNDDFYETKSSFGVQVVQETKRRPLTIKLTAKAILAAAATDSAGCHRDSIV 1463
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL S+KLNQRLL+SS RDGAIKVWK
Sbjct: 1464 SLASIKLNQRLLLSSGRDGAIKVWK 1488
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435788|ref|XP_004135676.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2088 bits (5409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1050/1465 (71%), Positives = 1185/1465 (80%), Gaps = 112/1465 (7%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+ WQETDKAAY+LRQYFFN+L DRLST PFLS++EKKWLAFQLLLAVKQ HEKGICHGDI
Sbjct: 91 QIWQETDKAAYVLRQYFFNNLHDRLSTRPFLSVIEKKWLAFQLLLAVKQSHEKGICHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVLVTSWNWLYL+DFASFKPTYIPYDDPSDF F++D+GG+RL YLAPERFYEHGGE+
Sbjct: 151 KCENVLVTSWNWLYLADFASFKPTYIPYDDPSDFYFYYDSGGRRLGYLAPERFYEHGGEL 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
Q A DAPL+PSMDIF+VGCVIAELFLE P FE L++YRRGQYDPSQHLEKIPDSGIR
Sbjct: 211 QDAHDAPLRPSMDIFSVGCVIAELFLEGQPLFERQQLISYRRGQYDPSQHLEKIPDSGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPELR SAE+YLQ+YA VVFP YFSPFLHNFYCCWNPLHSD RVA+C+ VF
Sbjct: 271 KMILHMIQLEPELRLSAENYLQDYANVVFPNYFSPFLHNFYCCWNPLHSDTRVALCQKVF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
P+IL+QM S G+ G+P+ S SQ+ TKQN NL + E EKG +
Sbjct: 331 PKILEQMTSCGSGL-TGTEKGSPTNNTS-GLSQDMNTKQNENLTRL-----ESTEKGLPR 383
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
++F LLGD+ TL D K++N CS + + ED ++++ N +S GEL SIS+AF
Sbjct: 384 DQFELLGDVDTLFRDVKQNNYCSGSEQLLEDAA----TKNITNCVDQSPGELFHSISNAF 439
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
RKN HPFL+KITM+NLSSLMS YDSQSDTFGMPFLPLPEDSMKCEG+VLIASLLCSC+RN
Sbjct: 440 RKNDHPFLQKITMSNLSSLMSSYDSQSDTFGMPFLPLPEDSMKCEGMVLIASLLCSCIRN 499
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RRAAILLL+SS+L+IDDEDRLQRVLP+VIAMLSD AAIVRCAALETLCDILPLV
Sbjct: 500 VKLPHLRRAAILLLRSSALYIDDEDRLQRVLPYVIAMLSDSAAIVRCAALETLCDILPLV 559
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSM+PDDPEESVRICYASNIAKLALTAYGFL+HS+ EAGV
Sbjct: 560 RDFPPSDAKIFPEYILPMLSMIPDDPEESVRICYASNIAKLALTAYGFLIHSMSFREAGV 619
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LDKLS P K + S+ETS QL +L+ DVQL+QLRKSIAEVVQELVMGPKQTP IRRALL+
Sbjct: 620 LDKLSIPQKPSAPSSETSGQLGKLHGDVQLAQLRKSIAEVVQELVMGPKQTPCIRRALLK 679
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIGNLC FFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY
Sbjct: 680 DIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 739
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQ+L D EAVIVN LDCLAILCK G+LRKRILLEMIE AFPLLCYPSQWVRRS TFI
Sbjct: 740 IEQSLKDTAEAVIVNGLDCLAILCKRGFLRKRILLEMIEHAFPLLCYPSQWVRRSAATFI 799
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE LGAVDSYVFLAPVIRPFLRRQP SLAS KALL CLKPP+SREV+Y++LE ARSS
Sbjct: 800 AASSERLGAVDSYVFLAPVIRPFLRRQPTSLASEKALLCCLKPPISREVYYEILEKARSS 859
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWY++S QS ++ D LK+G +L+ +K WP K Q
Sbjct: 860 DMLERQRKIWYSSSPQSVNWDSIDFLKKGMGELNLMKNWPSKPQ---------------- 903
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
+KL SGF+S QVSG++S DK+S+
Sbjct: 904 ----------------------------------KKLQLSGFISPQVSGISSFVLDKTSD 929
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFS+DKR G VASDS L++NSL
Sbjct: 930 GIPLYSFSLDKRDTGFHSVASDSPLELNSL------------------------------ 959
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
E + RE+DQ + ++ KF EMG+S T KG+S EDA S DLT
Sbjct: 960 -----------------EFDSRESDQTSYISSKFQEMGSSSTLKGNSSMTEDAPSTNDLT 1002
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
PSF R S+IPDSGW+PRG+LVAHLQEH SAVN+IA+S DHSFFVSAS+DSTVKVWDSR
Sbjct: 1003 TSPSFTRASAIPDSGWKPRGVLVAHLQEHHSAVNDIAVSTDHSFFVSASEDSTVKVWDSR 1062
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTYHLEGSRALC MLR SAQVVVG+CDG+IHMFSVD+ S+GLGN EK
Sbjct: 1063 KLEKDISFRSRLTYHLEGSRALCATMLRGSAQVVVGSCDGLIHMFSVDYFSKGLGNAAEK 1122
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSG++DIKKKD EGAI+T++NY+TD +S M MYSTQNCGIHLWDTR+N N +TLK+ P
Sbjct: 1123 YSGLADIKKKDINEGAIITMLNYSTD--SSQMVMYSTQNCGIHLWDTRTNVNVFTLKSTP 1180
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSL+ GPCGNWFVSGSSRGVLTLWDLRFLVPVNSW+YS +CPIE+MCLFV PPN
Sbjct: 1181 EEGYVSSLLAGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWKYSVLCPIERMCLFVHPPNT 1240
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+V+T ARPLIYV+AGCNEVSLWNAEN SCHQ+LR A+YD +TEMSDLPWA RPS++ NP
Sbjct: 1241 SVATAARPLIYVSAGCNEVSLWNAENWSCHQILRVASYDNETEMSDLPWALTRPSTKGNP 1300
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
DLRRNVN KY+VDELNEPPPRL GIRSLLPLPGGDLLTGGTDL+IRRW+H SP R+YC
Sbjct: 1301 IQDLRRNVNPKYKVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLRIRRWNHYSPDRTYC 1360
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
+CGPN+KG+GN++FYETRSS GVQVVQE +R+PL++KLT KA+LAAAATDSAGCHRDSIL
Sbjct: 1361 VCGPNVKGIGNEDFYETRSSFGVQVVQETRRRPLSTKLTTKAILAAAATDSAGCHRDSIL 1420
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLL+S SRDGAIKVWK
Sbjct: 1421 SLASVKLNQRLLLSGSRDGAIKVWK 1445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449489804|ref|XP_004158421.1| PREDICTED: LOW QUALITY PROTEIN: phosphoinositide 3-kinase regulatory subunit 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2085 bits (5403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1048/1465 (71%), Positives = 1184/1465 (80%), Gaps = 112/1465 (7%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+ WQETDKAAY+LRQYFFN+L DRLST PFLS++EKKWLAFQLLLAVKQ HEKGICHGDI
Sbjct: 91 QIWQETDKAAYVLRQYFFNNLHDRLSTRPFLSVIEKKWLAFQLLLAVKQSHEKGICHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVLVTSWNWLYL+DFASFKPTYIPYDDPSDF F++D+GG+RL YLAPERFYEHGGE+
Sbjct: 151 KCENVLVTSWNWLYLADFASFKPTYIPYDDPSDFYFYYDSGGRRLGYLAPERFYEHGGEL 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
Q+ DAPL+PSMDIF+VGCVIAELFLE P FE L++YRRGQYDPSQHLEKIPDSGIR
Sbjct: 211 QMQHDAPLRPSMDIFSVGCVIAELFLEGQPLFERQQLISYRRGQYDPSQHLEKIPDSGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPELR SAE+YLQ+YA VVFP YFSPFLHNFYCCWNPLHSD RVA+C+ VF
Sbjct: 271 KMILHMIQLEPELRLSAENYLQDYANVVFPNYFSPFLHNFYCCWNPLHSDTRVALCQKVF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
P+IL+QM S G+ G+P+ S SQ+ TKQN NL + E EKG +
Sbjct: 331 PKILEQMTSCGSGL-TGTEKGSPTNNTS-GLSQDMNTKQNENLTRL-----ESTEKGLPR 383
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
++F LLGD+ TL D K++N CS + + ED ++++ N +S GEL SIS+AF
Sbjct: 384 DQFELLGDVDTLFRDVKQNNYCSGSEQLLEDAA----TKNITNCVDQSPGELFHSISNAF 439
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
RKN HPFL+KITM+NLSSLMS YDSQSDTFGMPFLPLPEDSMKCEG+VLIASLLCSC+RN
Sbjct: 440 RKNDHPFLQKITMSNLSSLMSSYDSQSDTFGMPFLPLPEDSMKCEGMVLIASLLCSCIRN 499
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
VKLPH RRAAILLL+SS+L+IDDEDRLQRVLP+VIAMLSD AAIVRCAALETLCDILPLV
Sbjct: 500 VKLPHLRRAAILLLRSSALYIDDEDRLQRVLPYVIAMLSDSAAIVRCAALETLCDILPLV 559
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYILPMLSM+PDDPEESVRICYASNIAKLALTAYGFL+HS+ EAGV
Sbjct: 560 RDFPPSDAKIFPEYILPMLSMIPDDPEESVRICYASNIAKLALTAYGFLIHSMSFREAGV 619
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
LDKLS P K + S+ETS QL +L+ DVQL+QLRKSIAEVVQELVMGPKQTP IRRALL+
Sbjct: 620 LDKLSIPQKPSAPSSETSGQLGKLHGDVQLAQLRKSIAEVVQELVMGPKQTPCIRRALLK 679
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIGNLC FFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY
Sbjct: 680 DIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 739
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
IEQ+L D EAVIVN LDCLAILCK G+LRKRILLEMIE AFPLLCYPSQWVRRS TFI
Sbjct: 740 IEQSLKDTAEAVIVNGLDCLAILCKRGFLRKRILLEMIEHAFPLLCYPSQWVRRSAATFI 799
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE LGAVDSYVFLAPVIRPFLRRQP SLAS KALL CLKPP+SREV+Y++LE ARSS
Sbjct: 800 AASSERLGAVDSYVFLAPVIRPFLRRQPTSLASEKALLCCLKPPISREVYYEILEKARSS 859
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
DMLERQRKIWY++S QS ++ D LK+G +L+ +K WP K Q
Sbjct: 860 DMLERQRKIWYSSSPQSVNWDSIDFLKKGMGELNLMKNWPSKPQ---------------- 903
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
+KL SGF+S QVSG++S DK+S+
Sbjct: 904 ----------------------------------KKLQLSGFISPQVSGISSFVLDKTSD 929
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
GIPLYSFS+DKR G VASDS L++NSL
Sbjct: 930 GIPLYSFSLDKRDTGFHSVASDSPLELNSL------------------------------ 959
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
E + RE+DQ + ++ KF EMG+S T KG+S EDA S DLT
Sbjct: 960 -----------------EFDSRESDQTSYISSKFQEMGSSSTLKGNSSMTEDAPSTNDLT 1002
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
PSF R S+IPDSGW+PRG+LVAHLQEH SAVN+IA+S DHS FVSAS+DSTVKVWDSR
Sbjct: 1003 TSPSFTRASAIPDSGWKPRGVLVAHLQEHHSAVNDIAVSTDHSXFVSASEDSTVKVWDSR 1062
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTYHLEGSRALC MLR SAQVVVG+CDG+IHMFSVD+ S+GLGN EK
Sbjct: 1063 KLEKDISFRSRLTYHLEGSRALCATMLRGSAQVVVGSCDGLIHMFSVDYFSKGLGNAAEK 1122
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSG++DIKKKD EGAI+T++NY+TD +S M MYSTQNCGIHLWDTR+N N +TLK+ P
Sbjct: 1123 YSGLADIKKKDINEGAIITMLNYSTD--SSQMVMYSTQNCGIHLWDTRTNVNVFTLKSTP 1180
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSL+ GPCGNWFVSGSSRGVLTLWDLRFLVPVNSW+YS +CPIE+MCLFV PPN
Sbjct: 1181 EEGYVSSLLAGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWKYSVLCPIERMCLFVHPPNT 1240
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+V+T ARPLIYV+AGCNEVSLWNAEN SCHQ+LR A+YD +TEMSDLPWA RPS++ NP
Sbjct: 1241 SVATAARPLIYVSAGCNEVSLWNAENWSCHQILRVASYDNETEMSDLPWALTRPSTKGNP 1300
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
DLRRNVN KY+VDELNEPPPRL GIRSLLPLPGGDLLTGGTDL+IRRW+H SP R+YC
Sbjct: 1301 IQDLRRNVNPKYKVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLRIRRWNHYSPDRTYC 1360
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
+CGPN+KG+GN++FYETRSS GVQVVQE +R+PL++KLT KA+LAAAATDSAGCHRDSIL
Sbjct: 1361 VCGPNVKGIGNEDFYETRSSFGVQVVQETRRRPLSTKLTTKAILAAAATDSAGCHRDSIL 1420
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLL+S SRDGAIKVWK
Sbjct: 1421 SLASVKLNQRLLLSGSRDGAIKVWK 1445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297803098|ref|XP_002869433.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315269|gb|EFH45692.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 2065 bits (5349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1024/1465 (69%), Positives = 1192/1465 (81%), Gaps = 63/1465 (4%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FWQETDKAAYL+RQYF+++L DRLST PFLSLVEKKWLAFQLLLAVKQCHEK ICHGDI
Sbjct: 91 QFWQETDKAAYLVRQYFYSNLHDRLSTRPFLSLVEKKWLAFQLLLAVKQCHEKDICHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVL+TSWNWLYL+DFASFKPTYIPYDDPSDFSFFFDT G+RLCYLAPERFYEHGGE
Sbjct: 151 KCENVLLTSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTRGQRLCYLAPERFYEHGGET 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QVAQDAPLKPSMDIFAVGCVIAELFLE P FEL+ LLAYRRGQ+DPSQHLEKIPD GIR
Sbjct: 211 QVAQDAPLKPSMDIFAVGCVIAELFLEGQPLFELAQLLAYRRGQHDPSQHLEKIPDPGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPE R SAE YLQNY VVFP YFSPFLH YCCWNPL SDMRVA C+ +F
Sbjct: 271 KMILHMIQLEPEARLSAEDYLQNYVGVVFPNYFSPFLHTLYCCWNPLPSDMRVATCQGIF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
EILK+MM NK ++IG V P T+ V S+ + T N L
Sbjct: 331 QEILKKMMENKPGDEIG--VDPPVTSDPVNASKVQETFANHKL----------------- 371
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
NS S+DL ++V S E+L SISDA
Sbjct: 372 ---------------------------------NS--SKDLIRNTVNSKDEILYSISDAL 396
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
+KN HPFLKKITM++L +LMS YDS+SDT+G PFLP+ E +M+CEG+VLIAS+LCSC+RN
Sbjct: 397 KKNRHPFLKKITMDDLGTLMSLYDSRSDTYGTPFLPV-EGNMRCEGMVLIASMLCSCIRN 455
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
+KLPH RR AILLL+S SL+IDD+DRLQRVLP+V+A+LSDP AIVRCAA+ETLCDILPLV
Sbjct: 456 IKLPHLRREAILLLRSCSLYIDDDDRLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLV 515
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYI PMLSMLP+D EESVRICYASNIAKLALTAYGFL+HS +LS+ GV
Sbjct: 516 RDFPPSDAKIFPEYIFPMLSMLPEDTEESVRICYASNIAKLALTAYGFLIHSFQLSDVGV 575
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
L++L++ SP+ ++ET LQ+ N + QL+QLRK+IAEVVQELVMGPKQTP++RRALLQ
Sbjct: 576 LNELNSQQISPTPASETPSHLQKANGNAQLAQLRKTIAEVVQELVMGPKQTPNVRRALLQ 635
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIG LC FFGQRQSNDFLLPILPAFLNDRDEQLR+VF+ +IVYVCFFVG+RSVEEYLLPY
Sbjct: 636 DIGELCFFFGQRQSNDFLLPILPAFLNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPY 695
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
I+QALSD TEAVIVNAL+CL+ LCKS +LRKR LL+MIE +PLLCYPSQWVRR+VVTFI
Sbjct: 696 IDQALSDQTEAVIVNALECLSTLCKSSFLRKRALLQMIECVYPLLCYPSQWVRRAVVTFI 755
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE LGAVDSY F+APVIRP+L R PAS+AS + LLSCL PPV+REV Y++ E AR+
Sbjct: 756 AASSECLGAVDSYAFIAPVIRPYLSRLPASIASEEGLLSCLNPPVTREVVYRIFEKARNP 815
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
+++ +QRK+WY++S QSK ET DL + +L+SI+C ++++S E + SKQ E
Sbjct: 816 EIMAKQRKMWYSSSPQSKDWETVDLFDKDTGELNSIECGAEQKRSVEAQKQIKSASKQQE 875
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
AKLR + NAS+ ++RDP+ PEKL FSGFM+ VSG+NS E
Sbjct: 876 VQGKYAEKDAKLRIPRNPRPNASNTVELRDPVYPEKLQFSGFMAPYVSGMNSF---IEPE 932
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
IPLYSFSMDKRA N PVAS+S LQ+NSLG+GS ++PWMD+ ++SF+LASSVP P L+S
Sbjct: 933 NIPLYSFSMDKRAATNPPVASESSLQMNSLGMGSLSVPWMDSMSKSFNLASSVPVPKLIS 992
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
GSF + KQFYRVVHEPE RENDQ++S KF ++G S ++K +S+ EDASSPADL
Sbjct: 993 GSFHVGTNPKQFYRVVHEPESRENDQISSAISKFQDLGVSSSSKSASVTSEDASSPADLV 1052
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
G PS RT S+PDSGW+PRG+LVAHLQEH SAVN+IA S DHSFFVSASDDSTVKVWDSR
Sbjct: 1053 GEPSLSRT-SVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSR 1111
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTYHLEGSR +CT MLR+S QVVVGA DG+IHMFS+DHISRGLGN VEK
Sbjct: 1112 KLEKDISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEK 1171
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI DIKKKD KEGA+V+L+NY D+ + M MYSTQNCGIHLWDTRS+ + WTLKA P
Sbjct: 1172 YSGIVDIKKKDVKEGALVSLLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANP 1231
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSLVT PCGNWFVSGSSRGVLTLWDLRF V VNSW+Y +CPIEKMCL PP+
Sbjct: 1232 EEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVRVNSWRYPIICPIEKMCLCFLPPSV 1291
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+VSTT +P IYVAAGCNEVSLWNAE G+CHQVLR ANY+ +T++S+ W PS++ N
Sbjct: 1292 SVSTTMKPFIYVAAGCNEVSLWNAEGGNCHQVLRVANYENETDVSEFQWKL--PSNKVNS 1349
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
K +LR+N++ KYR++ELNEPPPRL GIRSLLPLPGGDL+TGGTDLKIRRWD+ SP RSYC
Sbjct: 1350 KPNLRQNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLVTGGTDLKIRRWDYSSPERSYC 1409
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGP+LKGVGND+FYE ++++GVQ VQE KR+PL +KLTAKAVLAAAATD+AGCHRDS+
Sbjct: 1410 ICGPSLKGVGNDDFYELKTNTGVQFVQETKRRPLATKLTAKAVLAAAATDTAGCHRDSVQ 1469
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLLISSSRDGAIK+WK
Sbjct: 1470 SLASVKLNQRLLISSSRDGAIKIWK 1494
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233564|ref|NP_194667.1| phosphoinositide-3-kinase, regulatory subunit 4, p150 [Arabidopsis thaliana] gi|7269836|emb|CAB79696.1| putative protein [Arabidopsis thaliana] gi|332660224|gb|AEE85624.1| phosphoinositide-3-kinase, regulatory subunit 4, p150 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2048 bits (5307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1029/1465 (70%), Positives = 1192/1465 (81%), Gaps = 63/1465 (4%)
Query: 10 KFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+FWQETDKAAYL+RQYF+++L DRLST PFLSLVEKKWLAFQLLLAVKQCHEK ICHGDI
Sbjct: 91 QFWQETDKAAYLVRQYFYSNLHDRLSTRPFLSLVEKKWLAFQLLLAVKQCHEKDICHGDI 150
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
KCENVL+TSWNWLYL+DFASFKPTYIPYDDPSDFSFFFDT G+RLCYLAPERFYEHGGE
Sbjct: 151 KCENVLLTSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTRGQRLCYLAPERFYEHGGET 210
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 188
QVAQDAPLKPSMDIFAVGCVIAELFLE P FEL+ LLAYRRGQ+DPSQHLEKIPD GIR
Sbjct: 211 QVAQDAPLKPSMDIFAVGCVIAELFLEGQPLFELAQLLAYRRGQHDPSQHLEKIPDPGIR 270
Query: 189 KMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVF 248
KMILHMIQLEPE R SAE YLQNY VVFP YFSPFLH YCCWNPL SDMRVA C+ +F
Sbjct: 271 KMILHMIQLEPEARLSAEDYLQNYVGVVFPNYFSPFLHTLYCCWNPLPSDMRVATCQGIF 330
Query: 249 PEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQ 308
EILK+MM NKS ++IG V +P T+ + S + T N L
Sbjct: 331 QEILKKMMENKSGDEIG--VDSPVTSNPMNASTVQETFANHKL----------------- 371
Query: 309 NRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAF 368
NS S+DL ++V S E+ SISDA
Sbjct: 372 ---------------------------------NS--SKDLIRNTVNSKDEIFYSISDAL 396
Query: 369 RKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRN 428
+KN HPFLKKITM++L +LMS YDS+SDT+G PFLP+ E +M+CEG+VLIAS+LCSC+RN
Sbjct: 397 KKNRHPFLKKITMDDLGTLMSLYDSRSDTYGTPFLPV-EGNMRCEGMVLIASMLCSCIRN 455
Query: 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
+KLPH RR AILLL+S SL+IDD+DRLQRVLP+V+A+LSDP AIVRCAA+ETLCDILPLV
Sbjct: 456 IKLPHLRREAILLLRSCSLYIDDDDRLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLV 515
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
R+FPPSDAKIFPEYI PMLSMLP+D EESVRICYASNIAKLALTAYGFL+HS +LS+ GV
Sbjct: 516 RDFPPSDAKIFPEYIFPMLSMLPEDTEESVRICYASNIAKLALTAYGFLIHSFQLSDVGV 575
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQ 608
L++L++ S + ++ET LQ+ N + QL QLRK+IAEVVQELVMGPKQTP++RRALLQ
Sbjct: 576 LNELNSQQISTTPASETPSHLQKANGNAQLQQLRKTIAEVVQELVMGPKQTPNVRRALLQ 635
Query: 609 DIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668
DIG LC FFGQRQSNDFLLPILPAFLNDRDEQLR+VF+ +IVYVCFFVG+RSVEEYLLPY
Sbjct: 636 DIGELCFFFGQRQSNDFLLPILPAFLNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPY 695
Query: 669 IEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728
I+QALSD TEAVIVNAL+CL+ LCKS +LRKR LL+MIE +PLLCYPSQWVRR+VVTFI
Sbjct: 696 IDQALSDQTEAVIVNALECLSTLCKSSFLRKRALLQMIECVYPLLCYPSQWVRRAVVTFI 755
Query: 729 AASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSS 788
AASSE LGAVDSY F+APVIR +L R PAS+AS + LLSCLKPPV+REV Y++ E R+
Sbjct: 756 AASSECLGAVDSYAFIAPVIRSYLSRLPASIASEEGLLSCLKPPVTREVVYRIFEKTRNP 815
Query: 789 DMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPE 848
+ + +QRK+WY++S QSK E+ DL + A +L+S++C +++QS EG + SKQPE
Sbjct: 816 EFMAKQRKMWYSSSPQSKDWESVDLFDKDAGELNSVECRAEQKQSVEGKKQIKSASKQPE 875
Query: 849 FAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSE 908
AKLR + NAS+ ++RDP+ PEKL FSGFM+ VSG NS E
Sbjct: 876 VQGKYAEKDAKLRIPRNPRPNASNTVELRDPVYPEKLQFSGFMAPYVSGANSF---IEPE 932
Query: 909 GIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVS 968
IPLYSFSMDKRA N PVAS+S LQ+NSLG+GS ++PWMD+ ++SF+LASSVP P L+S
Sbjct: 933 NIPLYSFSMDKRAATNPPVASESSLQMNSLGMGSLSVPWMDSMSKSFNLASSVPVPKLIS 992
Query: 969 GSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLT 1028
GSF + KQFYRVVHEPE RENDQ++S KF ++G S ++K +S+ EDASSPADL
Sbjct: 993 GSFHVGTNPKQFYRVVHEPESRENDQISSAISKFQDLGVSSSSKSASVTSEDASSPADLV 1052
Query: 1029 GLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSR 1088
G PS RT S+PDSGW+PRG+LVAHLQEH SAVN+IA S DHSFFVSASDDSTVKVWDSR
Sbjct: 1053 GEPSLSRT-SVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSR 1111
Query: 1089 KLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEK 1147
KLEKDISFRSRLTYHLEGSR +CT MLR+S QVVVGA DG+IHMFS+DHISRGLGN VEK
Sbjct: 1112 KLEKDISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEK 1171
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
YSGI DIKKKD KEGA+V+L+NY D+ + M MYSTQNCGIHLWDTRS+ + WTLKA P
Sbjct: 1172 YSGIVDIKKKDVKEGALVSLLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANP 1231
Query: 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1267
EEGYVSSLVT PCGNWFVSGSSRGVLTLWDLRF VPVNSWQY +CPIEKMCL PP+
Sbjct: 1232 EEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPVNSWQYPIICPIEKMCLCFLPPSV 1291
Query: 1268 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1327
+VSTT +PLIYVAAGCNEVSLWNAE GSCHQVLR ANY+ +T++S+ W PS++ NP
Sbjct: 1292 SVSTTMKPLIYVAAGCNEVSLWNAEGGSCHQVLRVANYENETDVSEFQWKL--PSNKVNP 1349
Query: 1328 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYC 1387
K + R+N++ KYR++ELNEPPPRL GIRSLLPLPGGDLLTGGTDLKIRRWD+ SP RSYC
Sbjct: 1350 KPNHRQNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDYSSPERSYC 1409
Query: 1388 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447
ICGP+LKGVGND+FYE ++++GVQ VQE KR+PL +KLTAKAVLAAAATD+AGCHRDS+
Sbjct: 1410 ICGPSLKGVGNDDFYELKTNTGVQFVQETKRRPLATKLTAKAVLAAAATDTAGCHRDSVQ 1469
Query: 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472
SL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1470 SLASVKLNQRLLISSSRDGAIKVWK 1494
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088049|ref|XP_002308305.1| predicted protein [Populus trichocarpa] gi|222854281|gb|EEE91828.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1850 bits (4791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 921/1219 (75%), Positives = 1031/1219 (84%), Gaps = 11/1219 (0%)
Query: 255 MMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLL 314
MMG+++SE G+ + +++ K S+E V KQNL+ + + RE +E G ++ LL
Sbjct: 1 MMGSRTSEVAGTRRDVFANSLNGKLSEEMVEKQNLD-STSHWRNRERIENGLTCQQYNLL 59
Query: 315 GDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHP 374
GDI++L+GD K+S+ + K MPE P S F QDL+ S +S ELLQ+IS+AFR+N HP
Sbjct: 60 GDINSLLGDVKQSSGYYSAKLMPESAPGSEFCQDLKQCSTKSPDELLQTISNAFRRNDHP 119
Query: 375 FLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHY 434
FLKKIT+++LSSLMSEYDSQSDTFGMPFLPLPEDSMKCEG+VLIASLLCSC+RNVKLPH
Sbjct: 120 FLKKITVDDLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHL 179
Query: 435 RRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 494
RR AILLLKS SL+IDDEDRLQRVLP+VIAMLSDPAAIVR AALETLCDILPLVR+FPPS
Sbjct: 180 RRGAILLLKSCSLYIDDEDRLQRVLPYVIAMLSDPAAIVRSAALETLCDILPLVRDFPPS 239
Query: 495 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSA 554
DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFL+HSI LS+AGVLD++S+
Sbjct: 240 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSIGLSKAGVLDEMSS 299
Query: 555 PHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLC 614
P S +S E QLQR+N D QLSQLRKSIAEVVQELVMGPKQTP+IRRALLQDIGNLC
Sbjct: 300 PQNSMASFIERPGQLQRVNNDAQLSQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGNLC 359
Query: 615 SFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALS 674
FFG RQSNDFLLPILPAFLNDRDEQLRA+FY +IVYVCFFVG+RSVEEYLLPYI+QALS
Sbjct: 360 CFFGHRQSNDFLLPILPAFLNDRDEQLRALFYSKIVYVCFFVGQRSVEEYLLPYIDQALS 419
Query: 675 DATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSES 734
D TE VIVNALDCLAILCK G+LRKR+LLEMIERAFPLLCYPSQWVRRS V+FIAASSES
Sbjct: 420 DQTEVVIVNALDCLAILCKRGFLRKRVLLEMIERAFPLLCYPSQWVRRSAVSFIAASSES 479
Query: 735 LGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSSDMLERQ 794
LGAVDSYVFLAPVIRPFL R PASLAS K+LL CL PPVSR+VFY LENARSSDMLERQ
Sbjct: 480 LGAVDSYVFLAPVIRPFLCRHPASLASEKSLLLCLVPPVSRQVFYHDLENARSSDMLERQ 539
Query: 795 RKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDD 854
RKIWYN+S+QSKQ E DLLK ++ +S+K WP+K+ S D +QPE D
Sbjct: 540 RKIWYNSSAQSKQWEPEDLLKGDDKEPNSMKSWPEKEPSPGDQNHDADRLEQPE-----D 594
Query: 855 NDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYS 914
D AKL +G + NASS DIRD L EKL FSG MS Q SGVNS DKSSEGIPLYS
Sbjct: 595 GD-AKLIAMG-FIANASSKVDIRDALSSEKLQFSGCMSPQFSGVNSFLHDKSSEGIPLYS 652
Query: 915 FSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSIS 974
FSMD+RA+ P SDS LQ+NSL I SS MPW+D +SFSLASSVP P LVSGSFSI+
Sbjct: 653 FSMDRRAVKFPPATSDSSLQMNSLAISSSYMPWVDHGIKSFSLASSVPAPKLVSGSFSIT 712
Query: 975 NGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFV 1034
NGSK FYRVVHEPE REN+Q + N K+ ++G GT+KGSS VEDA P DLTGLP F
Sbjct: 713 NGSKPFYRVVHEPESRENEQTSFFNGKYQDVGLYGTSKGSSFTVEDA-PPTDLTGLPLFA 771
Query: 1035 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1094
RT+SIPDSGW+PRG+LVAHLQEH SA+N+IA+S DHS FVSASDDST+KVWDSRKLEKDI
Sbjct: 772 RTASIPDSGWKPRGVLVAHLQEHRSAINDIAVSSDHSVFVSASDDSTIKVWDSRKLEKDI 831
Query: 1095 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISD 1153
SFRSRLTYHLEGSRALCT+ML + AQVVVGACDG IHMFSV+H+SRGLGN VEKYSGI+D
Sbjct: 832 SFRSRLTYHLEGSRALCTVMLHNIAQVVVGACDGTIHMFSVEHMSRGLGNVVEKYSGIAD 891
Query: 1154 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1213
IKKKD KEGAI++L+NY +DN MYSTQNCGIHLWD R+NSN WTLKA+PEEGY+S
Sbjct: 892 IKKKDIKEGAILSLLNYTSDNSDGQSVMYSTQNCGIHLWDIRANSNAWTLKAVPEEGYIS 951
Query: 1214 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1273
SLVTGPCGNWFVSGSSRGVLTLWDLRFL+PVNSW+YS VCP+EKMCLFVPPPN V++TA
Sbjct: 952 SLVTGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWKYSHVCPVEKMCLFVPPPNVTVTSTA 1011
Query: 1274 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRR 1333
RPLIYVAAG NEVSLWNAE GSCHQV+R ANYD + EMSD+PWA ARPSS++N K D+RR
Sbjct: 1012 RPLIYVAAGSNEVSLWNAETGSCHQVMRVANYDNE-EMSDIPWALARPSSKTNLKLDVRR 1070
Query: 1334 NVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNL 1393
NV KYRV+ELNEPPPR GIR++LPLPGGDLLTGGTDLKIRRWDH SP RSYCI GPNL
Sbjct: 1071 NVKPKYRVEELNEPPPRFPGIRAMLPLPGGDLLTGGTDLKIRRWDHFSPDRSYCISGPNL 1130
Query: 1394 KGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1453
G GND YETRSS GVQ+VQE KR+ LT+KLTAK VLAAAATDSAGCHRDSILSL SVK
Sbjct: 1131 NGAGNDNPYETRSSFGVQIVQETKRRHLTAKLTAKQVLAAAATDSAGCHRDSILSLASVK 1190
Query: 1454 LNQRLLISSSRDGAIKVWK 1472
LNQRLLISSSRDGAIKVWK
Sbjct: 1191 LNQRLLISSSRDGAIKVWK 1209
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738742|emb|CBI27987.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1568 bits (4061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1069 (75%), Positives = 862/1069 (80%), Gaps = 116/1069 (10%)
Query: 405 LPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIA 464
+ D M CEG+VLIASLLCSC+RNVKLPH RR AILLLKS SL+IDDEDRLQRVLP+VIA
Sbjct: 396 ISNDCMSCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSCSLYIDDEDRLQRVLPYVIA 455
Query: 465 MLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYAS 524
MLSDP AIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSMLPDDPEESVRICYA
Sbjct: 456 MLSDPVAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYAR 515
Query: 525 NIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKS 584
+I++LALTAYGFL+HS+ LSEAG L+QLRKS
Sbjct: 516 SISRLALTAYGFLIHSLSLSEAG------------------------------LAQLRKS 545
Query: 585 IAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAV 644
IAEVVQELVMGPKQTP+IRRALLQDIGNLC FFGQRQSNDFLLPILPAFLNDRDEQLRAV
Sbjct: 546 IAEVVQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAV 605
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
FYGQIVYVCFFVG+RSVEEYLLPYIEQALSDATEAVIVNALDCLA+LCKSG+LRKRILLE
Sbjct: 606 FYGQIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVNALDCLAVLCKSGFLRKRILLE 665
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
MI AFPLLCYPSQWVRRS VTFIAASSE+LGAVDSYVFLAPVIRPFLRRQPASLAS KA
Sbjct: 666 MIAHAFPLLCYPSQWVRRSAVTFIAASSENLGAVDSYVFLAPVIRPFLRRQPASLASEKA 725
Query: 765 LLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGAEDLSSI 824
LLSCLKPPVSR+VFY+VLENARSSD+L
Sbjct: 726 LLSCLKPPVSRQVFYEVLENARSSDIL--------------------------------- 752
Query: 825 KCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRDPLCPEK 884
PD Q++ E P G+ ++Q E QS+ N A+ R +GS + N SS DI DPLC +K
Sbjct: 753 ---PDGQRALEAQNPVGNAAQQLELTQSN-NSEARWRAVGSFMRNDSSTVDISDPLCSDK 808
Query: 885 LLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSST 944
L FSGFM+ Q+ GVNS CDKSSEGIPLYSFSMDKRA G P ASDS LQ
Sbjct: 809 LQFSGFMTPQIGGVNSFICDKSSEGIPLYSFSMDKRAAGVPPAASDSSLQ---------- 858
Query: 945 MPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPE 1004
VVHEPE RENDQ A VN KF +
Sbjct: 859 --------------------------------------VVHEPESRENDQTAYVNSKFQD 880
Query: 1005 MGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEI 1064
MG SGT+KGSSI VED+SS D+TGLPSF RTSSIPD GWRPRG+LVAHLQEH SAVN+I
Sbjct: 881 MGISGTSKGSSITVEDSSSSTDITGLPSFARTSSIPDMGWRPRGVLVAHLQEHRSAVNDI 940
Query: 1065 AISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1124
AIS DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY LEGSRALCT MLR+SAQV+VG
Sbjct: 941 AISTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYPLEGSRALCTAMLRNSAQVIVG 1000
Query: 1125 ACDGIIHMFSVDHISRGLGNV-EKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS 1183
ACDGIIHMFSVD+ISRGLGNV EKYSGI+DIKKKD EGAI++L+NY D S M MYS
Sbjct: 1001 ACDGIIHMFSVDYISRGLGNVVEKYSGIADIKKKDVGEGAILSLLNYCADGSPSQMVMYS 1060
Query: 1184 TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP 1243
TQNCGIHLWDTR+NSN WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP
Sbjct: 1061 TQNCGIHLWDTRTNSNAWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP 1120
Query: 1244 VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTA 1303
VNSWQYS VCPIE++CLFVPPPNA+VST ARPLIYVAAGCNEVSLWNAENGSCHQVLR A
Sbjct: 1121 VNSWQYSLVCPIEEICLFVPPPNASVSTMARPLIYVAAGCNEVSLWNAENGSCHQVLRVA 1180
Query: 1304 NYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1363
N + D EMSDLPWA ARPSS+SN K D+RRNVN KYRVDELNEP RL GIRSLLPLPGG
Sbjct: 1181 NNESDAEMSDLPWALARPSSKSNSKPDIRRNVNPKYRVDELNEPASRLPGIRSLLPLPGG 1240
Query: 1364 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTS 1423
DLLTGGTDLKIRRWDH SP RSYCICGP +KGVGND+F+ET+SS GVQVVQE KR+PL +
Sbjct: 1241 DLLTGGTDLKIRRWDHYSPDRSYCICGPTIKGVGNDDFFETKSSFGVQVVQETKRRPLAT 1300
Query: 1424 KLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472
KLT+KAVLAAAATDSAGCHRDS+LSL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1301 KLTSKAVLAAAATDSAGCHRDSVLSLASVKLNQRLLISSSRDGAIKVWK 1349
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1472 | ||||||
| TAIR|locus:2118234 | 1494 | VPS15 "vacuolar protein sortin | 0.775 | 0.764 | 0.671 | 0.0 | |
| DICTYBASE|DDB_G0282627 | 1966 | vps15 "VPS15 family protein ki | 0.184 | 0.138 | 0.469 | 1.1e-141 | |
| UNIPROTKB|E2QZF5 | 1358 | PIK3R4 "Uncharacterized protei | 0.251 | 0.272 | 0.339 | 8.9e-137 | |
| MGI|MGI:1922919 | 1358 | Pik3r4 "phosphatidylinositol 3 | 0.25 | 0.270 | 0.340 | 1.2e-135 | |
| ZFIN|ZDB-GENE-050309-84 | 1386 | pik3r4 "phosphoinositide-3-kin | 0.144 | 0.152 | 0.504 | 1.4e-135 | |
| RGD|1311809 | 1358 | Pik3r4 "phosphoinositide-3-kin | 0.251 | 0.272 | 0.336 | 5.2e-135 | |
| UNIPROTKB|Q99570 | 1358 | PIK3R4 "Phosphoinositide 3-kin | 0.251 | 0.272 | 0.336 | 1.3e-134 | |
| UNIPROTKB|A6QLW1 | 1358 | PIK3R4 "PIK3R4 protein" [Bos t | 0.256 | 0.278 | 0.335 | 1.4e-134 | |
| UNIPROTKB|Q5R9I3 | 1358 | PIK3R4 "Phosphoinositide 3-kin | 0.251 | 0.272 | 0.334 | 9.9e-133 | |
| UNIPROTKB|I3LEJ8 | 1354 | PIK3R4 "Uncharacterized protei | 0.258 | 0.281 | 0.326 | 4.4e-130 |
| TAIR|locus:2118234 VPS15 "vacuolar protein sorting 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4015 (1418.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 780/1161 (67%), Positives = 923/1161 (79%)
Query: 322 GD--GKESNQCSNVKPMPEDVPNSTF-------SQDLRNSSVESSGELLQSISDAFRKNG 372
GD G +S SN PM TF S+DL ++V S E+ SISDA +KN
Sbjct: 343 GDEIGVDSPVTSN--PMNASTVQETFANHKLNSSKDLIRNTVNSKDEIFYSISDALKKNR 400
Query: 373 HPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLP 432
HPFLKKITM++L +LMS YDS+SDT+G PFLP+ E +M+CEG+VLIAS+LCSC+RN+KLP
Sbjct: 401 HPFLKKITMDDLGTLMSLYDSRSDTYGTPFLPV-EGNMRCEGMVLIASMLCSCIRNIKLP 459
Query: 433 HYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFP 492
H RR AILLL+S SL+IDD+DRLQRVLP+V+A+LSDP AIVRCAA+ETLCDILPLVR+FP
Sbjct: 460 HLRREAILLLRSCSLYIDDDDRLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLVRDFP 519
Query: 493 PSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKL 552
PSDAKIFPEYI PMLSMLP+D EESVRICYASNIAKLALTAYGFL+HS +LS+ GVL++L
Sbjct: 520 PSDAKIFPEYIFPMLSMLPEDTEESVRICYASNIAKLALTAYGFLIHSFQLSDVGVLNEL 579
Query: 553 SAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGN 612
++ S + ++ET LQ+ N + QL QLRK+IAEVVQELVMGPKQTP++RRALLQDIG
Sbjct: 580 NSQQISTTPASETPSHLQKANGNAQLQQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGE 639
Query: 613 LCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQA 672
LC FFGQRQSNDFLLPILPAFLNDRDEQLR+VF+ +IVYVCFFVG+RSVEEYLLPYI+QA
Sbjct: 640 LCFFFGQRQSNDFLLPILPAFLNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQA 699
Query: 673 LSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASS 732
LSD TEAVIVNAL+CL+ LCKS +LRKR LL+MIE +PLLCYPSQWVRR+VVTFIAASS
Sbjct: 700 LSDQTEAVIVNALECLSTLCKSSFLRKRALLQMIECVYPLLCYPSQWVRRAVVTFIAASS 759
Query: 733 ESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSSDMLE 792
E LGAVDSY F+APVIR +L R PAS+AS + LLSCLKPPV+REV Y++ E R+ + +
Sbjct: 760 ECLGAVDSYAFIAPVIRSYLSRLPASIASEEGLLSCLKPPVTREVVYRIFEKTRNPEFMA 819
Query: 793 RQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQS 852
+QRK+WY++S QSK E+ DL + A +L+S++C +++QS EG + SKQPE
Sbjct: 820 KQRKMWYSSSPQSKDWESVDLFDKDAGELNSVECRAEQKQSVEGKKQIKSASKQPEVQGK 879
Query: 853 DDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPL 912
AKLR + NAS+ ++RDP+ PEKL FSGFM+ VSG NS E IPL
Sbjct: 880 YAEKDAKLRIPRNPRPNASNTVELRDPVYPEKLQFSGFMAPYVSGANSFI---EPENIPL 936
Query: 913 YSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFS 972
YSFSMDKRA N PVAS+S LQ+NSLG+GS ++PWMD+ ++SF+LASSVP P L+SGSF
Sbjct: 937 YSFSMDKRAATNPPVASESSLQMNSLGMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFH 996
Query: 973 ISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPS 1032
+ KQFYRVVHEPE RENDQ++S KF ++G S ++K +S+ EDASSPADL G PS
Sbjct: 997 VGTNPKQFYRVVHEPESRENDQISSAISKFQDLGVSSSSKSASVTSEDASSPADLVGEPS 1056
Query: 1033 FVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK 1092
RTS +PDSGW+PRG+LVAHLQEH SAVN+IA S DHSFFVSASDDSTVKVWDSRKLEK
Sbjct: 1057 LSRTS-VPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEK 1115
Query: 1093 DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNV-EKYSGI 1151
DISFRSRLTYHLEGSR +CT MLR+S QVVVGA DG+IHMFS+DHISRGLGNV EKYSGI
Sbjct: 1116 DISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGI 1175
Query: 1152 SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211
DIKKKD KEGA+V+L+NY D+ + M MYSTQNCGIHLWDTRS+ + WTLKA PEEGY
Sbjct: 1176 VDIKKKDVKEGALVSLLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGY 1235
Query: 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVST 1271
VSSLVT PCGNWFVSGSSRGVLTLWDLRF VPVNSWQY +CPIEKMCL PP+ +VST
Sbjct: 1236 VSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPVNSWQYPIICPIEKMCLCFLPPSVSVST 1295
Query: 1272 TARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1331
T +PLIYVAAGCNEVSLWNAE GSCHQVLR ANY+ +T++S+ W PS++ NPK +
Sbjct: 1296 TMKPLIYVAAGCNEVSLWNAEGGSCHQVLRVANYENETDVSEFQWKL--PSNKVNPKPNH 1353
Query: 1332 RRNVNQKYRVDELNEPPPRLLGIRSXXXXXXXXXXXXXXXXKIRRWDHCSPGRSYCICGP 1391
R+N++ KYR++ELNEPPPRL GIRS KIRRWD+ SP RSYCICGP
Sbjct: 1354 RQNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDYSSPERSYCICGP 1413
Query: 1392 NLKGVGNDEFYETRSSSGVQVVQERKRQPXXXXXXXXXXXXXXXXXXXGCHRDSILSLGS 1451
+LKGVGND+FYE ++++GVQ VQE KR+P GCHRDS+ SL S
Sbjct: 1414 SLKGVGNDDFYELKTNTGVQFVQETKRRPLATKLTAKAVLAAAATDTAGCHRDSVQSLAS 1473
Query: 1452 VKLNQRLLISSSRDGAIKVWK 1472
VKLNQRLLISSSRDGAIKVWK
Sbjct: 1474 VKLNQRLLISSSRDGAIKVWK 1494
|
|
| DICTYBASE|DDB_G0282627 vps15 "VPS15 family protein kinase Vps15" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 600 (216.3 bits), Expect = 1.1e-141, Sum P(6) = 1.1e-141
Identities = 138/294 (46%), Positives = 180/294 (61%)
Query: 14 ETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
ETD++ YL+RQYF N+L DRLST PFLS++EKK++AFQLL A++Q KG+ HGDIK EN
Sbjct: 90 ETDRSGYLIRQYFHNNLYDRLSTRPFLSMIEKKFIAFQLLKALEQSSFKGVFHGDIKSEN 149
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYXXXXXXXXXXXTGGKRLCYLAPERFYEHGGEMQVAQ 133
VLVT+ NW+YLSDFA +KPT+IP T G+R CY+APERFYE
Sbjct: 150 VLVTTSNWVYLSDFACYKPTFIPEDNPADFSFYFDTSGRRTCYIAPERFYETN--RGAPS 207
Query: 134 DAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHL-EKIPDSGIRKMI 191
+ L P MDIF++GCVIAELFL+ P F+ S LL+YR+G+Y P + ++I D I+ +I
Sbjct: 208 NNELTPKMDIFSLGCVIAELFLDGFPIFDFSQLLSYRKGEYSPEPIIRQRIQDPNIQTLI 267
Query: 192 LHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMRVAMCRS-VFPE 250
LHMIQ +P+ R++ E Y+ + V FP YFS F H F L +D RV MC S F E
Sbjct: 268 LHMIQKDPDQRYTPEKYISKWNTV-FPQYFS-FAHQFIPELMRLENDDRV-MCISDKFDE 324
Query: 251 ILKQMMGN------KS-------SEDIGS-GVGTPSTAMSVKESQERVTKQNLN 290
I+ N KS S IGS V TPS+ + + + N N
Sbjct: 325 IVDIFKNNSITNLFKSNLNQSTNSNTIGSFRVSTPSSPILISNNNNNNNNNNNN 378
|
|
| UNIPROTKB|E2QZF5 PIK3R4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 521 (188.5 bits), Expect = 8.9e-137, Sum P(5) = 8.9e-137
Identities = 131/386 (33%), Positives = 202/386 (52%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 586
A LA TA FL ++L + P+S V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNSEEIGEVTHPNGNYDTELQALHEMVQ 538
Query: 587 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 644
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHVYE 655
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLEPYITQPIIQIERKLV 715
Query: 765 LLSCLKPPVSREVFYQVLENARSSDM 790
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| MGI|MGI:1922919 Pik3r4 "phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 1.2e-135, Sum P(5) = 1.2e-135
Identities = 132/388 (34%), Positives = 203/388 (52%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E + G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGESRASGLVVLVSVITSCLQTLKSCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVQEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNAD--VQLSQLRKS 584
A LA TA FL L + L+ + P NE + R N D +L L +
Sbjct: 487 ALLAETALRFL----ELVQLKTLNMENEP------DNEEVDEATRPNGDYDTELQALHEM 536
Query: 585 IAEVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLR 642
+ + V L+ P+ +++ L++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 537 VQQKVVTLLSDPENI--VKQTLMESGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLR 594
Query: 643 AVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRIL 702
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K +
Sbjct: 595 GAFFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHV 653
Query: 703 LEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASV 762
E P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 654 YEFASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPVIQIERK 713
Query: 763 KALLSCLKPPVSREVFYQVLENARSSDM 790
LLS LK PVSR +F L RS D+
Sbjct: 714 LVLLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| ZFIN|ZDB-GENE-050309-84 pik3r4 "phosphoinositide-3-kinase, regulatory subunit 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 1.4e-135, Sum P(5) = 1.4e-135
Identities = 117/232 (50%), Positives = 144/232 (62%)
Query: 15 TDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74
T+KAA L RQY ++L DR+ST PFL+ VEKKW+AFQLL AV Q H+ G+ HGDIK ENV
Sbjct: 93 TEKAAILFRQYVRDNLYDRISTRPFLNNVEKKWIAFQLLNAVDQAHKSGVRHGDIKTENV 152
Query: 75 LVTSWNWLYLSDFASFKPTYIPYXXXXXXXXXXXTGGKRLCYLAPERFYEHGGEM---QV 131
+VTSWNW+ L+DFASFKPTY+P T +R CY+APERF + G M +
Sbjct: 153 MVTSWNWVLLTDFASFKPTYLPEDNPADFNYFFDTSRRRTCYIAPERFVD--GSMFATES 210
Query: 132 AQDAPL--------------KPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPS 176
Q PL K MDIF+ GCVIAELF E VP F+LS LLAYR+G +
Sbjct: 211 DQTTPLVDLSSNSQRTRGELKQPMDIFSAGCVIAELFTEGVPLFDLSQLLAYRKGHFQTE 270
Query: 177 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNF 228
Q L KI D IR+++ M+Q EPE R +AE YL+ FP F FL +
Sbjct: 271 QVLMKIEDHSIRELVAQMVQREPEKRLTAEEYLKQQRGKAFPEIFYTFLQPY 322
|
|
| RGD|1311809 Pik3r4 "phosphoinositide-3-kinase, regulatory subunit 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 510 (184.6 bits), Expect = 5.2e-135, Sum P(5) = 5.2e-135
Identities = 130/386 (33%), Positives = 202/386 (52%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGESKASGLVVLVSVITSCLQTLKSCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
++ VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NNSVPRVRAEALRTLTKVLALVQEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 586
A LA TA FL E L L+ ++ P S + D +L L + +
Sbjct: 487 ALLAETALRFL-------ELVQLKTLNMENE-PDSEEVDEATRPNGDYDTELQALHEMVQ 538
Query: 587 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 644
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHVYE 655
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPVIQIERKLV 715
Query: 765 LLSCLKPPVSREVFYQVLENARSSDM 790
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|Q99570 PIK3R4 "Phosphoinositide 3-kinase regulatory subunit 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 1.3e-134, Sum P(5) = 1.3e-134
Identities = 130/386 (33%), Positives = 201/386 (52%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 586
A LA TA FL ++L + P++ V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNNEEIDEVTHPNGNYDTELQALHEMVQ 538
Query: 587 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 644
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
F+ IV V +VG +S L P ++Q LSDA E VIV AL L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYE 655
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVARQISTADVYCKLMPYLDPYITQPIIQIERKLV 715
Query: 765 LLSCLKPPVSREVFYQVLENARSSDM 790
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|A6QLW1 PIK3R4 "PIK3R4 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 1.4e-134, Sum P(5) = 1.4e-134
Identities = 132/394 (33%), Positives = 204/394 (51%)
Query: 399 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 458
G L + K G+V++ S++ SC++ +K + AA+ L+ + + E L R+
Sbjct: 359 GHDLLEKADGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRI 418
Query: 459 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 518
P+++ +D VR AL TL +L LV+ P +D I+PEYILP ++ L D V
Sbjct: 419 TPYLLHFSNDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIV 478
Query: 519 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 578
R+ YA NIA LA TA FL ++L + P+S V N D +L
Sbjct: 479 RLAYAENIALLAETALRFL-ELVQLKNLNM-------ENDPNSEEIDEVTHPNGNYDTEL 530
Query: 579 SQLRKSIAEVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDR 637
L + + + V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+
Sbjct: 531 QALHEMVQQKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDK 588
Query: 638 DE-QLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGY 696
++ LR F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G
Sbjct: 589 NDWHLRGAFFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGL 647
Query: 697 LRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQP 756
L+K + E P LC+P+ W+R V FI + + D Y L P + P++ +
Sbjct: 648 LQKPHVYEFASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPI 707
Query: 757 ASLASVKALLSCLKPPVSREVFYQVLENARSSDM 790
+ LLS LK PVSR +F L RS D+
Sbjct: 708 IQIERKLVLLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|Q5R9I3 PIK3R4 "Phosphoinositide 3-kinase regulatory subunit 4" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 9.9e-133, Sum P(5) = 9.9e-133
Identities = 129/386 (33%), Positives = 202/386 (52%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E+ K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EEEPKENGLVILVSVITSCLQTLKYYDSKLAALELILHLAPRLGVEILLDRITPYLLHFS 426
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 586
A LA TA FL ++L + P++ V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNNEEIDEVTHPNGNYDTELQALHEMVQ 538
Query: 587 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 644
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
F+ IV V +VG +S L P ++Q LSDA E VIV AL L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYE 655
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
P LC+P+ W+R V F+ + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFVTVVARQISTADVYCKLMPYLDPYITQPIIQIERKLV 715
Query: 765 LLSCLKPPVSREVFYQVLENARSSDM 790
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|I3LEJ8 PIK3R4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 4.4e-130, Sum P(5) = 4.4e-130
Identities = 131/401 (32%), Positives = 204/401 (50%)
Query: 407 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 466
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 368 EGEPKESGLVILVSVITSCLQTLKYCDSKLAALELILHLAPKLSVEILLDRITPYLLHFS 427
Query: 467 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 526
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA I
Sbjct: 428 NDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAEKI 487
Query: 527 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 586
A LA TA FL E L L+ + S S + + D +L L + +
Sbjct: 488 ALLAETALRFL-------ELVQLKNLNMENDPNSESTHPNGEY-----DTELQALHEMVQ 535
Query: 587 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 644
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 536 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 593
Query: 645 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 704
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ L+K + E
Sbjct: 594 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLALLQKPHVYE 652
Query: 705 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 764
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 653 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISIADVYCKLMPYLDPYITQPIIQIERKLV 712
Query: 765 LLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQS 805
LLS LK PVSR +F L RS D+ R + +S
Sbjct: 713 LLSVLKEPVSRSIFDYAL---RSKDITSLFRHLHMRQKKRS 750
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh2_kg.7__1252__AT4G29380.1 | annotation not avaliable (1494 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| fgenesh2_kg.2__412__AT1G60490.1 | annotation not avaliable (813 aa) | • | • | • | • | 0.862 | |||||
| fgenesh2_kg.5__77__AT2G01690.2 | annotation not avaliable (744 aa) | • | • | 0.499 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1472 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-21 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-19 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-14 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-13 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-13 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-13 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-11 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 7e-11 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-10 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-10 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-10 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 6e-10 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-09 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-09 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-09 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 3e-09 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-09 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-08 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-08 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-08 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 3e-08 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-08 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-07 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-07 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-07 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 5e-07 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 6e-07 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 7e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 8e-07 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 9e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-06 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-06 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-06 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 4e-06 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-06 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 9e-06 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 2e-05 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 3e-05 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 3e-05 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 5e-05 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 6e-05 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 6e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 9e-05 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-04 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 1e-04 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-04 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 3e-04 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 4e-04 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 6e-04 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 6e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 7e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 7e-04 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 0.001 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 0.001 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 0.001 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 0.001 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 0.001 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 0.001 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 0.002 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 0.002 | |
| pfam02985 | 31 | pfam02985, HEAT, HEAT repeat | 0.003 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 0.004 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.004 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 2e-21
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 29 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF- 87
L D L LS E ++ Q+L A++ H KGI H D+K EN+L+ + L+DF
Sbjct: 83 DLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFG 142
Query: 88 -ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146
A D + F T Y+APE V ++DI+++
Sbjct: 143 LARQ------LDPGEKLTTFVGT----PEYMAPE----------VLLGKGYGKAVDIWSL 182
Query: 147 GCVIAELFL-EVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL 201
G ++ EL + PF LL + + I +I ++ +PE
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKD-LIRKLLVKDPEK 241
Query: 202 RFSAESYLQ 210
R +AE LQ
Sbjct: 242 RLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 1e-19
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
E + YL+ +Y SL+D L LS E + Q+L ++ H GI H D+K
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120
Query: 72 ENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130
EN+L+ S N + L+DF K + T Y+APE
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLL-------TSDKSLLKTIVGTPAYMAPEVLL------- 166
Query: 131 VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKM 190
DI+++G ++ EL ++ +
Sbjct: 167 --GKGYYSEKSDIWSLGVILYEL-------------------------------PELKDL 193
Query: 191 ILHMIQLEPELRFSAESYLQN 211
I M+Q +PE R SA+ L++
Sbjct: 194 IRKMLQKDPEKRPSAKEILEH 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 51/207 (24%), Positives = 81/207 (39%), Gaps = 24/207 (11%)
Query: 12 WQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70
E YL+ +Y L D LS LS E K +A Q+L ++ H GI H D+K
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLK 125
Query: 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130
EN+L+ + ++DF K + F G Y+APE +
Sbjct: 126 PENILLDENGVVKIADFGLAKKLLKSSSSLTTF-----VGTPW--YMAPEV-------LL 171
Query: 131 VAQDAPLKPSMDIFAVGCVIAELFL-EVPFF---ELSHLLAYRR---GQYDPSQHLEKIP 183
P +D++++G ++ EL + PF L L RR + +
Sbjct: 172 GGNGYG--PKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSG 229
Query: 184 DSGIRKMILHMIQLEPELRFSAESYLQ 210
+ +I + +P R +AE LQ
Sbjct: 230 SEEAKDLIKKCLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 74.0 bits (180), Expect = 1e-13
Identities = 50/216 (23%), Positives = 81/216 (37%), Gaps = 26/216 (12%)
Query: 14 ETDKAAYLLRQYF-FNSLRDRLSTPPF---LSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+ + + YL+ +Y SL D L LS E ++ Q+L A++ H KGI H DI
Sbjct: 68 QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDI 127
Query: 70 KCENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGE 128
K EN+L+ + L DF K S T Y+APE
Sbjct: 128 KPENILLDRDGRVVKLIDFGLAK-LLPDPGSTSSIPALPSTSVGTPGYMAPEV------- 179
Query: 129 MQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF------------FELSHLLAYRRGQYDP 175
+ A S DI+++G + EL PF ++ L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 176 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211
S ++ ++ ++ +P+ R S+ S L +
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275
|
Length = 384 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 3e-13
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 46/259 (17%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1107
G L+ L+ H V ++A S D ++ S S D T+++WD E + H
Sbjct: 41 GELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTG----HTS-- 94
Query: 1108 RALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIK-KKDTKEGAIV 1165
+ ++ +++ + D I ++ +VE ++ ++ D V
Sbjct: 95 -YVSSVAFSPDGRILSSSSRDKTIKVW----------DVETGKCLTTLRGHTDW-----V 138
Query: 1166 TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFV 1225
V ++ D S+Q+ I LWD R+ TL G V+S+ P G +
Sbjct: 139 NSVAFSPDG---TFVASSSQDGTIKLWDLRTGKCVATLTG--HTGEVNSVAFSPDGEKLL 193
Query: 1226 SGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285
S SS G + LWDL + + N S P Y+ A +E
Sbjct: 194 SSSSDGTIKLWDLSTG--------------KCLGTLRGHENGVNSVAFSPDGYLLASGSE 239
Query: 1286 ---VSLWNAENGSCHQVLR 1301
+ +W+ G C Q L
Sbjct: 240 DGTIRVWDLRTGECVQTLS 258
|
Length = 289 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 5e-13
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 49/182 (26%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF---------ASFKPTYI- 95
W QL LA+K H + I H DIK +N+ +TS + L DF T +
Sbjct: 107 DWF-VQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVG 165
Query: 96 -PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154
PY YL+PE Q+ P DI+++GCV+ EL
Sbjct: 166 TPY------------------YLSPELC----------QNKPYNYKSDIWSLGCVLYELC 197
Query: 155 -LEVPFFELSHL--LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209
L+ P FE +L LA + +GQY P + S +R ++ ++Q +PE R S L
Sbjct: 198 TLKHP-FEGENLLELALKILKGQYPP---IPSQYSSELRNLVSSLLQKDPEERPSIAQIL 253
Query: 210 QN 211
Q+
Sbjct: 254 QS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 1e-11
Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 64/236 (27%)
Query: 15 TDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
T++ YL+ +Y L+ L P LS K + +QLL + CH I H D+K +N
Sbjct: 69 TERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQN 128
Query: 74 VLVTSWNWLYLSDF---ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE-----RFYEH 125
+L+ L L+DF +F Y L Y APE + Y
Sbjct: 129 ILINRDGVLKLADFGLARAFGIPLRTYTHEV----------VTLWYRAPEILLGSKHYS- 177
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHL---------------- 165
++DI++VGC+ AE+ P F E+ L
Sbjct: 178 -------------TAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224
Query: 166 ----LAYRRGQY------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211
L + + D + L ++ GI ++ M+Q P R SA+ L++
Sbjct: 225 GVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGI-DLLSKMLQYNPAKRISAKEALKH 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 7e-11
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 20 YLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78
YL+ +Y +L + L P L + +QLL A+ CH I H DIK EN+LV+
Sbjct: 76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE 135
Query: 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC--YLAPERFYEHGGEMQVAQDAP 136
L L DF F+ Y+A R+Y E+ V D
Sbjct: 136 SGVLKLCDFG--------------FARALRARPASPLTDYVA-TRWYR-APELLVG-DTN 178
Query: 137 LKPSMDIFAVGCVIAELFLEVPFF 160
+D++A+GC++AEL P F
Sbjct: 179 YGKPVDVWAIGCIMAELLDGEPLF 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 4e-10
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 57/185 (30%)
Query: 50 FQLLLAVKQCHEKG-----ICHGDIKCENVLVTSWNWLYLSDF---------ASFKPTYI 95
QLLLA+ +CH + + H D+K N+ + + N + L DF +SF TY+
Sbjct: 112 TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV 171
Query: 96 --PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153
PY Y++PE DI+++GC+I EL
Sbjct: 172 GTPY------------------YMSPE----------QLNHMSYDEKSDIWSLGCLIYEL 203
Query: 154 F-LEVPFFELSHL-LA--YRRGQYDPSQHLEKIPD---SGIRKMILHMIQLEPELRFSAE 206
L PF + L LA + G++ IP S + ++I M+ ++P+ R S E
Sbjct: 204 CALSPPFTARNQLQLASKIKEGKFRR------IPYRYSSELNEVIKSMLNVDPDKRPSTE 257
Query: 207 SYLQN 211
LQ
Sbjct: 258 ELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 5e-10
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 26/120 (21%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
K +QLL + CH GI H D+K EN+L+ + L L+DF + S
Sbjct: 101 KSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFG------SPVRP 154
Query: 106 FFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160
+ R Y APE + Y +DI++VGC+ AEL P F
Sbjct: 155 YTHYVVTRW-YRAPELLLGDKGY--------------STPVDIWSVGCIFAELLSRRPLF 199
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 6e-10
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 36/194 (18%)
Query: 29 SLRDRLSTPPFLSLVEK--KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 86
SL L F L E + Q+L + H GI H DIK N+LV S + L+D
Sbjct: 87 SLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLAD 144
Query: 87 F--ASFKPTYIPYDDPSDF--SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142
F A + + + ++APE V + + D
Sbjct: 145 FGCAKRLGDIETGEGTGSVRGTPY---------WMAPE----------VIRGEEYGRAAD 185
Query: 143 IFAVGCVIAELFL-EVPFFELSHLLA--YRRGQYDPSQHLEKIPD---SGIRKMILHMIQ 196
I+++GC + E+ + P+ EL + +A Y+ G S +IP+ + + ++
Sbjct: 186 IWSLGCTVIEMATGKPPWSELGNPMAALYKIGS---SGEPPEIPEHLSEEAKDFLRKCLR 242
Query: 197 LEPELRFSAESYLQ 210
+P+ R +A+ LQ
Sbjct: 243 RDPKKRPTADELLQ 256
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 6e-10
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 20 YLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78
Y++ +Y + L L +P + + K QLL ++ H GI H DIK N+L+ +
Sbjct: 76 YMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN 135
Query: 79 WNWLYLSDF--ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 136
L L+DF A + +D++ T L Y PE G +
Sbjct: 136 DGVLKLADFGLA----RPYTKRNSADYTNRVIT----LWYRPPELLL---GATR------ 178
Query: 137 LKPSMDIFAVGCVIAELFLEVPFF-------------------------ELSHLLAYRRG 171
P +D+++VGC++AELFL P F +S L +
Sbjct: 179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE-- 236
Query: 172 QYDPSQHLE--------KIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
P + + + D ++ ++ L+P+ R SA+ LQ
Sbjct: 237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 34/174 (19%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
QLL + H GI H DIK N+ + + L DF + + +
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAV--KLKNNTTTMGEEVQSLA 164
Query: 111 GKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH 164
G Y+APE + HG + DI+++GCV+ E+ + P+ EL +
Sbjct: 165 GTPA-YMAPEVITGGKGKGHGR------------AADIWSLGCVVLEMATGKRPWSELDN 211
Query: 165 LLA--YRRGQYDPSQHLEKIPDS------GIRKMILHMIQLEPELRFSAESYLQ 210
+ G IPDS G + ++ +P+ R +A LQ
Sbjct: 212 EFQIMFHVGAGHKPP----IPDSLQLSPEGKD-FLDRCLESDPKKRPTASELLQ 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 1e-09
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
K + +Q L AV CH+ H D+K EN+L+T + L DF F D D++
Sbjct: 103 KKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFG-FARILTGPGD--DYTD 159
Query: 106 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158
+ T R Y APE G+ Q P +D++A+GCV AEL P
Sbjct: 160 YVAT---RW-YRAPELLV---GDTQYG------PPVDVWAIGCVFAELLTGQP 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-09
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 63/199 (31%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
QLL + CH+K H DIKC N+L+ + + L+DF + +++
Sbjct: 124 QLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG--------------LARLYNSE 169
Query: 111 GKR--------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-- 160
R L Y PE G E P++D+++ GC++ ELF + P F
Sbjct: 170 ESRPYTNKVITLWYRPPELLL--GEER-------YGPAIDVWSCGCILGELFTKKPIFQA 220
Query: 161 --ELSHLLAYRR--GQYDPS-------------------------QHLEKIPDSGIRKMI 191
EL+ L R G P+ + IP + ++
Sbjct: 221 NQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPAL-DLL 279
Query: 192 LHMIQLEPELRFSAESYLQ 210
HM+ L+P R +AE L
Sbjct: 280 DHMLTLDPSKRCTAEEALN 298
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 3e-09
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS---FKPTYIPYDDPSD 102
++ A ++LLA++ H KGI H D+K EN+L+ + ++DF + P P + D
Sbjct: 105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD 164
Query: 103 FSFFFDTGGKRLC----------YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152
+ K Y++PE + + P S D++A+GC+I +
Sbjct: 165 ATNIDSQIEKNRRRFASFVGTAEYVSPE----------LLNEKPAGKSSDLWALGCIIYQ 214
Query: 153 LFL-EVPFFELSHLLAYRR---GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208
+ + PF + L +++ +Y + + +I ++ L+P+ R
Sbjct: 215 MLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPD----AKDLIEKLLVLDPQDRLGVNEG 270
Query: 209 LQN 211
Sbjct: 271 YDE 273
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-09
Identities = 56/206 (27%), Positives = 80/206 (38%), Gaps = 57/206 (27%)
Query: 40 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 99
L K +QLL + CHE + H D+K +N+L+ L L+DF + IP
Sbjct: 97 LDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154
Query: 100 PSDFSFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154
+ FS T L Y AP+ R Y S+DI++VGC++AE+
Sbjct: 155 -NTFSNEVVT----LWYRAPDVLLGSRTY--------------STSIDIWSVGCIMAEMI 195
Query: 155 LEVPFF-------------------------ELSHLLAYRRG--QYDP---SQHLEKIPD 184
P F +S L Y+ +Y P Q
Sbjct: 196 TGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADP 255
Query: 185 SGIRKMILHMIQLEPELRFSAESYLQ 210
GI ++ ++QL PELR SA LQ
Sbjct: 256 LGI-DLLHRLLQLNPELRISAHDALQ 280
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 1e-08
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Query: 37 PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 96
P L K L QLL V H I H D+K +N+LVTS + ++DF + Y
Sbjct: 101 KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR-IY-- 157
Query: 97 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156
F + L Y APE V + +D+++VGC+ AELF
Sbjct: 158 -----SFEMALTSVVVTLWYRAPE----------VLLQSSYATPVDMWSVGCIFAELFRR 202
Query: 157 VPFFELSHLLAYRRGQYDPSQHLEKI 182
P F RG + Q L+KI
Sbjct: 203 RPLF---------RGTSEADQ-LDKI 218
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-08
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 69/205 (33%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI--PYDDPSDF 103
K +QLL ++ H GI H DIK EN+L+ + L L+DF S + Y PY +
Sbjct: 103 KSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE---- 157
Query: 104 SFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158
+ T R Y APE +Y P MDI+AVGCV E+ P
Sbjct: 158 --YIST---RW-YRAPECLLTDGYY--------------GPKMDIWAVGCVFFEILSLFP 197
Query: 159 FF----EL--------------SHLLAYRRGQYDPSQHLE-KIP---DSGIRKMILH--- 193
F EL + +L R S+H+ P +G+RK++ +
Sbjct: 198 LFPGTNELDQIAKIHDVLGTPDAEVLKKFR----KSRHMNYNFPSKKGTGLRKLLPNASA 253
Query: 194 --------MIQLEPELRFSAESYLQ 210
++ +P+ R +A+ L+
Sbjct: 254 EGLDLLKKLLAYDPDERITAKQALR 278
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 2e-08
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 71/203 (34%)
Query: 50 FQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF------ASFKPTYIPYDDPSDF 103
+Q+L + H+ G H D+K EN+LV+ + ++DF S +P Y Y
Sbjct: 106 YQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS-RPPYTDYV----- 159
Query: 104 SFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158
R Y APE Y +P+ DI+A+GC++AEL+ P
Sbjct: 160 -------STRW-YRAPEILLRSTSY----------SSPV----DIWALGCIMAELYTLRP 197
Query: 159 FF----------------------------ELSHLLAYRRGQYDP---SQHLEKIPDSGI 187
F +L+ L +R Q+ P Q + I
Sbjct: 198 LFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAI 257
Query: 188 RKMILHMIQLEPELRFSAESYLQ 210
+I M++ +P+ R +A LQ
Sbjct: 258 -DLIKDMLRWDPKKRPTASQALQ 279
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-08
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 29 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 88
SL D + TP S + K L QLL ++ HE I H D+K N+L+T L ++DF
Sbjct: 96 SLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFG 153
Query: 89 SFKPTYIPYDD--PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146
+ +P P + L Y APE G ++D++AV
Sbjct: 154 LARTYGLPAKPMTPKVVT---------LWYRAPELLL--GCTTYTT-------AIDMWAV 195
Query: 147 GCVIAELFLEVPFF 160
GC++AEL P
Sbjct: 196 GCILAELLAHKPLL 209
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-08
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 20 YLLRQYFFNSLRDRL---STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76
L+ +Y + L + L P L + K LL V H GI H D+K N+L+
Sbjct: 75 VLVMEYMPSDLSEVLRDEERP--LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI 132
Query: 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE-----RFYEHGGEMQV 131
++ L ++DF + + + + + Y APE R Y+
Sbjct: 133 SADGVLKIADFGLAR----LFSEEEPRLYSHQVATRW--YRAPELLYGARKYD------- 179
Query: 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFF 160
P +D++AVGC+ AEL P F
Sbjct: 180 -------PGVDLWAVGCIFAELLNGSPLF 201
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 8e-08
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
Query: 50 FQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDT 109
+Q+L + HE+G+ H DIK N+L T + L+DF T + D S
Sbjct: 106 YQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGV--ATKLNDVSKDDASV---- 159
Query: 110 GGKRLC---YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHL 165
+ ++APE V + + + DI+++GC + EL P+++L+ +
Sbjct: 160 ----VGTPYWMAPE----------VIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM 205
Query: 166 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
A R D L + ++ ++ Q +P LR +A+ L+
Sbjct: 206 AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 56.3 bits (134), Expect = 9e-08
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 25/204 (12%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1107
L+ L H S+V +A S D S S D TV++WD + S LT
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKL----LSSLTLKGHEG 329
Query: 1108 RALCTMMLRHSAQVVVGAC-DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT 1166
+ +V G DG I ++ + + L +E +S + + + +G +V+
Sbjct: 330 PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT-GKPLKTLEGHSNVLSVSF--SPDGRVVS 386
Query: 1167 LVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS 1226
+ + + LWD + S L V+SL P G S
Sbjct: 387 SGSTDGT---------------VRLWDLSTGSLLRNLDGHT--SRVTSLDFSPDGKSLAS 429
Query: 1227 GSSRGVLTLWDLRFLVPVNSWQYS 1250
GSS + LWDL+ + S+
Sbjct: 430 GSSDNTIRLWDLKTSLKSVSFSPD 453
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-07
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1086
G L+ L+ H V +A S D + S SDD TV+VWD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-07
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1086
G L+ L+ H V +A S D + S SDD T+K+WD
Sbjct: 2 GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-07
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 45 KKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 104
K+++A +++L V+ H++GI H DIK EN+L+ L L+DF +
Sbjct: 100 KQYIA-EVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------ 152
Query: 105 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161
F T YLAPE G + D +++GCVI E P F
Sbjct: 153 -FVGTPD----YLAPETILGVGDDKMS----------DWWSLGCVIFEFLFGYPPFH 194
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-07
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 46 KWLAF---QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF---ASFKPTYIPYDD 99
+A+ +LL ++ H GI H DIK N+L+TS + L DF A T
Sbjct: 98 SQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT------ 151
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158
+ + G ++APE V P DI+++G EL + P
Sbjct: 152 KARNTM---VGTP--YWMAPE----------VINGKPYDYKADIWSLGITAIELAEGKPP 196
Query: 159 FFELSHLLA-YRRGQYDP--SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ EL + A ++ P ++ EK D + + +Q PE R +AE L+
Sbjct: 197 YSELPPMKALFKIATNGPPGLRNPEKWSDE-FKDFLKKCLQKNPEKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 5e-07
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 17 KAAYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74
K YL+ ++ +++ D L P +K+L FQ+L ++ CH I H DIK EN+
Sbjct: 73 KRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL-FQILRGIEFCHSHNIIHRDIKPENI 131
Query: 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQD 134
LV+ + L DF + P + +D+ R Y APE + D
Sbjct: 132 LVSQSGVVKLCDFGFARTLAAPGEVYTDYV------ATRW-YRAPE---------LLVGD 175
Query: 135 APLKPSMDIFAVGCVIAELFLEVPFF 160
++DI+AVGC++ E+ P F
Sbjct: 176 TKYGRAVDIWAVGCLVTEMLTGEPLF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 5e-07
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 53/179 (29%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA------------SFKPTYIPYD 98
Q+LL ++ H++ H DIK N+LV + + L+DF SFK + PY
Sbjct: 110 QILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGS--PY- 166
Query: 99 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158
++APE +AQ + DI+++GC + E+ P
Sbjct: 167 -----------------WMAPE---------VIAQQGGYGLAADIWSLGCTVLEMATGKP 200
Query: 159 ----FFELSHLLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPELRFSAESYLQ 210
++ + R S+ L IPD + IL +Q +P LR +A L+
Sbjct: 201 PWSQLEGVAAVFKIGR-----SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 6e-07
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 47 WLAF-QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
W F QLL ++ HE+ I H D+K N+L+ + + + + D K
Sbjct: 106 WRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK---------KN 156
Query: 106 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 165
T Y+APE V + P DI+++GC++ E+ P FE +
Sbjct: 157 MAKTQIGTPHYMAPE----------VWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM 206
Query: 166 --LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214
L Y+ RG+Y P + I ++ I M+Q++P+LR + + L + A
Sbjct: 207 QDLRYKVQRGKYPP---IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 7e-07
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 34/131 (25%)
Query: 39 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 98
L+ + K L ++ H I H D+K N+L+ S L L+DF
Sbjct: 98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG---------- 147
Query: 99 DPSDFSFFFDTGGKRLC-------YLAPERFY--EHGGEMQVAQDAPLKPSMDIFAVGCV 149
+ F + +++ Y APE + H G +D+++VGC+
Sbjct: 148 ----LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYG-----------VGVDMWSVGCI 192
Query: 150 IAELFLEVPFF 160
AEL L VPF
Sbjct: 193 FAELLLRVPFL 203
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.2 bits (126), Expect = 8e-07
Identities = 89/432 (20%), Positives = 148/432 (34%), Gaps = 65/432 (15%)
Query: 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1113
L+ H ++ IA S D +S S D T+K+WD EK I +S H L
Sbjct: 61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLI--KSLEGLHDSSVSKLALS 118
Query: 1114 ML-RHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNT 1172
+S + + DG + ++ + + + +E +S VT + ++
Sbjct: 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSE-------------SVTSLAFSP 165
Query: 1173 DNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW-FVSGSSRG 1231
D + S+ + I LWD R+ TL VSSL P G SGSS G
Sbjct: 166 DG--KLLASGSSLDGTIKLWDLRTGKPLSTLA--GHTDPVSSLAFSPDGGLLIASGSSDG 221
Query: 1232 VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR--PLIYVAAGCNEVSLW 1289
+ LWDL + S ++ VS+ + L+ + + LW
Sbjct: 222 TIRLWDLSTGKLLRS-------------TLSGHSDSVVSSFSPDGSLLASGSSDGTIRLW 268
Query: 1290 NAENGSCHQVLRTANYDGDTEMS---DLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1346
+ + S + + ++ D + S + DL + +E
Sbjct: 269 DLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHE 328
Query: 1347 PPPRLLGIRSLLPLPGGDLL--TGGTDLKIRRWDHCSPGRSYCICGPN----LKGVGNDE 1400
P + SL P G LL G D IR WD + + G + + +
Sbjct: 329 GP-----VSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGR 383
Query: 1401 FYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLI 1460
+ S+ G + + L L H + SL + + L
Sbjct: 384 VVSSGSTDGTVRLWDLSTGSLLRNL--------------DGHTSRVTSL-DFSPDGKSLA 428
Query: 1461 SSSRDGAIKVWK 1472
S S D I++W
Sbjct: 429 SGSSDNTIRLWD 440
|
Length = 466 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 9e-07
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 41 SLVEKKW---------LAF---QLLLAVKQCHEKGICHGDIKCENVLVTSWNW-LYLSDF 87
+L+ KW + F Q+L +K H+ I H DIK +NVLV +++ + +SDF
Sbjct: 94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDF 153
Query: 88 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147
+ K + +P +F TG L Y+APE + G AP DI+++G
Sbjct: 154 GTSK--RLAGINPCTETF---TG--TLQYMAPE-VIDKG---PRGYGAP----ADIWSLG 198
Query: 148 CVIAELFL-EVPFFELS--HLLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPEL 201
C I E+ + PF EL ++ G + H E IP+S + IL + +P+
Sbjct: 199 CTIVEMATGKPPFIELGEPQAAMFKVGMF--KIHPE-IPESLSAEAKNFILRCFEPDPDK 255
Query: 202 RFSAESYLQN 211
R SA LQ+
Sbjct: 256 RASAHDLLQD 265
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 1e-06
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 47 WLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 106
W FQ++ AV H+ GI H DIK N+ +T + L DF K S++S
Sbjct: 105 WYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKIL------GSEYSMA 158
Query: 107 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL 166
G Y++PE + Q DI+A+GCV+ EL F+ ++ L
Sbjct: 159 ETVVGTPY-YMSPE----------LCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL 207
Query: 167 AY----RRGQYDPSQHLEKIPD---SGIRKMILHMIQLEPELRFSAESYLQN 211
+G Y P + S + ++ ++Q +PE R +A+ L
Sbjct: 208 NLVVKIVQGNYTP------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 3e-06
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 1044 WRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY 1102
W G + L+ H + VN +A S D S S+D T++VWD R E
Sbjct: 204 WDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE--------CVQ 255
Query: 1103 HLEG--SRALCTMMLRHSAQVVVGACDGIIHMFS 1134
L G + ++ G+ DG I ++
Sbjct: 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 42/175 (24%)
Query: 42 LVEKKWLAF--QLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDF------ASFKP 92
L E L F Q+LLA+ H K I H D+K +N+L+ + + DF +S
Sbjct: 98 LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157
Query: 93 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152
Y P CY++PE + + P DI+A+GCV+ E
Sbjct: 158 AYTVVGTP--------------CYISPE----------LCEGKPYNQKSDIWALGCVLYE 193
Query: 153 LFLEVPFFELSHL----LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELR 202
L FE ++L L G + P S PD +R++IL M+ L+P R
Sbjct: 194 LASLKRAFEAANLPALVLKIMSGTFAPISDRYS--PD--LRQLILSMLNLDPSKR 244
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 4e-06
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
QLL + HE I H DIK N+L+ + L ++DF + PYD P G
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR----PYDGPPPNPKGGGGG 178
Query: 111 GKR--------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161
G R Y PE + + ++DI+ +GCV AE+F P +
Sbjct: 179 GTRKYTNLVVTRWYRPPE---------LLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 5e-06
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 20 YLLRQYFFNSLRDRLSTPPFLSLVEK-KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78
YL+ +Y ++ + L P EK + +QL+ A+ CH+ I H DIK EN+L++
Sbjct: 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH 135
Query: 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLK 138
+ L L DF + + ++++ + T Y +PE + AP
Sbjct: 136 NDVLKLCDFGFARN--LSEGSNANYTEYVAT----RWYRSPE----------LLLGAPYG 179
Query: 139 PSMDIFAVGCVIAELFLEVPFF 160
++D+++VGC++ EL P F
Sbjct: 180 KAVDMWSVGCILGELSDGQPLF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 9e-06
Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 68/225 (30%)
Query: 43 VEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA---SFKPTYIPYDD 99
V K+++ +QLL A+K H + H D+K N+L+ S + L+DF S ++
Sbjct: 107 VHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPEN 166
Query: 100 PSDFSFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154
P + + T R Y APE Y G +D+++VGC++ E+
Sbjct: 167 P-VLTDYVAT---RW-YRAPEILLGSTRYTKG--------------VDMWSVGCILGEML 207
Query: 155 LEVPFF-----------------------------ELSHLL---AYRRGQYDPSQHLEKI 182
L P F + + R + + L K
Sbjct: 208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA 267
Query: 183 PDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHN 227
D + ++ ++ P R +AE L++ Y + F HN
Sbjct: 268 SDDAL-DLLKKLLVFNPNKRLTAEEALEH-------PYVAQF-HN 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 2e-05
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 22 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT-SWN 80
+ +Y + R+ + P FL K ++QL A+ H K ICH D+K +N+L+ + +
Sbjct: 153 VHKYMKHYARNNHALPLFLV----KLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH 208
Query: 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPS 140
L L DF S K G+R RFY M A +
Sbjct: 209 TLKLCDFGSAKNLL---------------AGQRSVSYICSRFYRAPELMLGATN--YTTH 251
Query: 141 MDIFAVGCVIAELFLEVPFF 160
+D++++GC+IAE+ L P F
Sbjct: 252 IDLWSLGCIIAEMILGYPIF 271
|
Length = 440 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-05
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 20 YLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77
Y++ +Y + L+ + T PF E K L QLL V H+ I H D+K N+L+
Sbjct: 82 YMVMEYVEHDLKSLMETMKQPF-LQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN 140
Query: 78 SWNWLYLSDFASFKPTYIPYDDP-SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 136
+ L + DF + Y P ++ T L Y APE G + +
Sbjct: 141 NRGILKICDFGLAR----EYGSPLKPYTQLVVT----LWYRAPELLL---GAKEYS---- 185
Query: 137 LKPSMDIFAVGCVIAELFLEVPFF 160
++D+++VGC+ AEL + P F
Sbjct: 186 --TAIDMWSVGCIFAELLTKKPLF 207
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.7 bits (112), Expect = 3e-05
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
++ A +++LA++ H GI + D+K EN+L+ + + L+DF K + + +F
Sbjct: 96 RFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKE--LSSEGSRTNTF 153
Query: 106 FFDTGGKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFF 160
C YLAPE V ++D +++G ++ E L + PF+
Sbjct: 154 ---------CGTPEYLAPE----------VLLGKGYGKAVDWWSLGVLLYEMLTGKPPFY 194
Query: 161 ELSHLLAYRRGQYDPSQHLEKIP---DSGIRKMILHMIQLEPELRFSAESY 208
Y + DP + P R +I ++Q +P R +
Sbjct: 195 AEDRKEIYEKILKDP----LRFPEFLSPEARDLISGLLQKDPTKRLGSGGA 241
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 46/174 (26%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS---------FKPTYI--PYDD 99
Q+ L V+ HEK + H DIK +N+ +T + L DF S + TY+ PY
Sbjct: 108 QMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPY-- 165
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL-FLEVP 158
Y+ PE + ++ P DI+++GC++ EL L+ P
Sbjct: 166 ----------------YVPPE----------IWENMPYNNKSDIWSLGCILYELCTLKHP 199
Query: 159 FFELS--HL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209
F S +L L +G Y P L +R +I M + P R SA + L
Sbjct: 200 FQANSWKNLILKVCQGSYKP---LPSHYSYELRSLIKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 6e-05
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
+++LA++ H GI H D+K +N+L+ S L L+DF + + +
Sbjct: 101 EIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL---SKVGLVRRQINLNDDEKE 157
Query: 111 GKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE---- 161
KR+ Y+APE V ++D +++GC++ E + PF
Sbjct: 158 DKRIVGTPDYIAPE----------VILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE 207
Query: 162 --LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207
++L G+ + + +E ++ +I ++ +PE R A+S
Sbjct: 208 EIFQNILN---GKIEWPEDVEVSDEA--IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 6e-05
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 42/180 (23%)
Query: 44 EKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 103
E L Q+LLAV H K + H DIK N+L+ S + L DF F Y
Sbjct: 144 EAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG-FSKMYA-------- 194
Query: 104 SFFFDTGGKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVP 158
+ D G+ C Y+APE + + P D+F++G ++ EL L+ P
Sbjct: 195 ATVSDDVGRTFCGTPYYVAPE----------IWRRKPYSKKADMFSLGVLLYELLTLKRP 244
Query: 159 F-----FELSH-LLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPELRFSAESYL 209
F E+ H LA G+YDP +P S +++++ ++ +P+ R S+ L
Sbjct: 245 FDGENMEEVMHKTLA---GRYDP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 9e-05
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
++ +QLL A+K H + H D+K +N+L + L + DF + + D P+ F
Sbjct: 106 QFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN--DTPTAI-F 162
Query: 106 FFDTGGKRLCYLAPE---RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160
+ D R Y APE F+ + P++DI+++GC+ AE+ P F
Sbjct: 163 WTDYVATRW-YRAPELCGSFF-----------SKYTPAIDIWSIGCIFAEVLTGKPLF 208
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 48/176 (27%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA---------SFKPTYI--PYDD 99
Q+ LA+K H++ I H DIK +N+ +T + L DF T I PY
Sbjct: 109 QICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPY-- 166
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159
YL+PE + ++ P DI+A+GCV+ E+
Sbjct: 167 ----------------YLSPE----------ICENRPYNNKSDIWALGCVLYEMCTLKHA 200
Query: 160 FELSHL----LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
FE ++ L RG Y P S H +R ++ + + P R S S L+
Sbjct: 201 FEAGNMKNLVLKIIRGSYPPVSSHYS----YDLRNLVSQLFKRNPRDRPSVNSILE 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 56/229 (24%)
Query: 20 YLLRQY-------FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
YL+ +Y F +S P ++ +QLL V CH+ G+ H D+K +
Sbjct: 82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKS--FMYQLLKGVAHCHKHGVMHRDLKPQ 139
Query: 73 NVLV-TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV 131
N+LV L ++D + IP ++ T L Y APE G
Sbjct: 140 NLLVDKQKGLLKIADLGLGRAFSIPV---KSYTHEIVT----LWYRAPEVLL---GSTHY 189
Query: 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRR----------------- 170
+ +DI++VGC+ AE+ + P F EL LL +
Sbjct: 190 ST------PVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLR 243
Query: 171 --------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211
D S+ + + G+ ++ M++ +P R SA++ L +
Sbjct: 244 DWHEFPQWKPQDLSRAVPDLSPEGL-DLLQKMLRYDPAKRISAKAALTH 291
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-04
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 41 SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY-DD 99
+L E K + LL + H I H D+K N+L+T L L+DF + +
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK 176
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158
P+ ++ T L Y PE GE P +D++ GC++AE++ P
Sbjct: 177 PNRYTNRVVT----LWYRPPELLL---GERDYG------PPIDMWGAGCIMAEMWTRSP 222
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLY-LSDFASFKPTYIPYDDPSDFSFFFDT 109
Q+ L +K H++ I H DIK +N+ ++ + L DF + +D + ++ T
Sbjct: 109 QISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIAR----QLNDSMELAY---T 161
Query: 110 GGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL-FLEVPF--FELSHL- 165
YL+PE + Q+ P DI+++GCV+ EL L+ PF L L
Sbjct: 162 CVGTPYYLSPE----------ICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV 211
Query: 166 LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
L +G + P S + + +R +I + ++ P R S S L+
Sbjct: 212 LKICQGYFAPISPNFSR----DLRSLISQLFKVSPRDRPSITSILK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 3e-04
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 37 PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 96
PP L K L Q L + H I H D+K EN+LVTS + L+DF Y
Sbjct: 102 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG-LARIY-- 158
Query: 97 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156
L Y APE +Q P+ D+++VGC+ AE+F
Sbjct: 159 -----SCQMALTPVVVTLWYRAPEVL------LQSTYATPV----DMWSVGCIFAEMFRR 203
Query: 157 VPFF 160
P F
Sbjct: 204 KPLF 207
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 3e-04
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 15 TDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
T++ L+ +Y + L+ L + +S+ K FQLL + CH++ I H D+K +N
Sbjct: 74 TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQN 133
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQ 133
+L+ L L+DF + +P S+ L Y P+ G + +
Sbjct: 134 LLINEKGELKLADFGLARAKSVPTKTYSNEVV-------TLWYRPPDVLL---GSTEYST 183
Query: 134 DAPLKPSMDIFAVGCVIAELFLEVPFF 160
+D++ VGC++ E+ P F
Sbjct: 184 ------PIDMWGVGCILYEMATGRPMF 204
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 4e-04
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 34 LSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 93
+ +P L+ ++ +Q+L +K H + H D+K N+LV S L + DF +
Sbjct: 94 IKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153
Query: 94 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153
D+ + + T R Y APE + + ++DI++VGC+ AEL
Sbjct: 154 DPDEDEKGFLTEYVVT---RW-YRAPEL-------LLSSSR--YTKAIDIWSVGCIFAEL 200
Query: 154 FLEVPFF 160
P F
Sbjct: 201 LTRKPLF 207
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 6e-04
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 30/154 (19%)
Query: 15 TDKAAYLLRQYFFNSLRDRLSTPPFLSL---VEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
++ YL+ ++ L+ + + P L + K +L +QLL + CH + H D+K
Sbjct: 69 SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYL-YQLLQGIAYCHSHRVLHRDLKP 127
Query: 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE-----RFYEHG 126
+N+L+ L L+DF + +P ++ T L Y APE R Y
Sbjct: 128 QNLLIDREGALKLADFGLARAFGVPV---RTYTHEVVT----LWYRAPEILLGSRQYSTP 180
Query: 127 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160
+DI+++GC+ AE+ P F
Sbjct: 181 --------------VDIWSIGCIFAEMVNRRPLF 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 6e-04
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 46 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 105
K + FQLL + H + H D+K +N+LVTS + L+DF Y F
Sbjct: 113 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG-LARIY-------SFQM 164
Query: 106 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 165
+ L Y APE +Q + P+ D+++VGC+ AE+F P F
Sbjct: 165 ALTSVVVTLWYRAPEVL------LQSSYATPV----DLWSVGCIFAEMFRRKPLF----- 209
Query: 166 LAYRRGQYDPSQHLEKIPD 184
RG D Q L KI D
Sbjct: 210 ----RGSSDVDQ-LGKILD 223
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 7e-04
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 20 YLLRQYFFN-SLRDRLSTPPFLSLVEKK-WLAF-QLLLAVKQCHEKGICHGDIKCENVLV 76
++ +Y N L L L E + W F Q+LL + H K I H DIK N+ +
Sbjct: 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL 134
Query: 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 136
+++ + + D K SD + F +T YL+PE + +D P
Sbjct: 135 DAYDNVKIGDLGVAKLL-------SDNTNFANTIVGTPYYLSPE----------LCEDKP 177
Query: 137 LKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDP 175
D++A+G V+ E F+ ++ +L RG + P
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 7e-04
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 15 TDKAAYLLRQYFFNSLRDRLSTPPFLSLVEK--KWLAFQLLLAVKQCHEKGICHGDIKCE 72
++K YL+ +Y L+ + + P + + K +Q+L + CH + H D+K +
Sbjct: 72 SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQ 131
Query: 73 NVLVT-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE-----RFYEHG 126
N+L+ N L L+DF + IP F+ T L Y APE R Y
Sbjct: 132 NLLIDRRTNALKLADFGLARAFGIPV---RTFTHEVVT----LWYRAPEILLGSRHYS-- 182
Query: 127 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160
+DI++VGC+ AE+ + P F
Sbjct: 183 ------------TPVDIWSVGCIFAEMVNQKPLF 204
|
Length = 294 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 49/229 (21%)
Query: 15 TDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
TDK+ L+ +Y L+ + +S+ K +Q+L + CH + + H D+K +N
Sbjct: 75 TDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQN 134
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQ 133
+L+ L L+DF + +P S+ L Y P+ +
Sbjct: 135 LLINERGELKLADFGLARAKSVPTKTYSNEVV-------TLWYRPPD---------VLLG 178
Query: 134 DAPLKPSMDIFAVGCVIAELFLEVPFFELS------HLL--------------------- 166
+ +D++ VGC+ E+ P F S HL+
Sbjct: 179 SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238
Query: 167 -AYRRGQYDPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211
Y +Y P H ++ GI +++ +Q E + R SAE +++
Sbjct: 239 KNYNFPKYKPQPLINHAPRLDTEGI-ELLTKFLQYESKKRISAEEAMKH 286
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 0.001
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 57/231 (24%)
Query: 15 TDKAAYLLRQYFFNSLRDRL-STPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
T+ YL+ ++ L+ + ++P + L K FQLL + CH + H D+K +
Sbjct: 70 TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 129
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE-----RFYEHGG 127
N+L+ + + L+DF + +P ++ T L Y APE ++Y
Sbjct: 130 NLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVT----LWYRAPEILLGCKYYS--- 179
Query: 128 EMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRG------------ 171
++DI+++GC+ AE+ F E+ L R
Sbjct: 180 -----------TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228
Query: 172 ----QYDPS------QHLEKI-P--DSGIRKMILHMIQLEPELRFSAESYL 209
Y PS Q K+ P D R ++ M+ +P R SA++ L
Sbjct: 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 0.001
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 53 LLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK--------PTYIPYDDPSDFS 104
+LA++ H GI H D+K +N+L+TS + L+DF K Y + + D
Sbjct: 111 VLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIE-KDTR 169
Query: 105 FFFDTGGKRLC----YLAPERFYEHG-GEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158
F D K++C Y+APE G G KP +D +A+G ++ E + VP
Sbjct: 170 EFLD---KQVCGTPEYIAPEVILRQGYG----------KP-VDWWAMGIILYEFLVGCVP 215
Query: 159 FF 160
FF
Sbjct: 216 FF 217
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 0.001
Identities = 41/119 (34%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 40 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF--ASF----KPT 93
L L + +A QLL A+ H +GI H DIK ENVLV + L DF A F T
Sbjct: 257 LGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316
Query: 94 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152
Y + DT APE V P PS+DI++ G VI E
Sbjct: 317 PFHY----GIAGTVDTN-------APE----------VLAGDPYTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 39 FLSLVEKK--------WLAF-QLLLAVKQCH-EKGICHGDIKCENVLVTSWNWLYLSDFA 88
F SL EKK W F Q++LA++ H EK I H D+ N+++ + + ++DF
Sbjct: 100 FNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159
Query: 89 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148
K S G L Y PE + ++ P D++A GC
Sbjct: 160 LAK-------QKQPESKLTSVVGTIL-YSCPE----------IVKNEPYGEKADVWAFGC 201
Query: 149 VIAEL-FLEVPFFELSHL-LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELR 202
++ ++ L+ PF+ + L LA + Y+P E + + +I + + E R
Sbjct: 202 ILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPDAEAR 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 60/188 (31%)
Query: 47 WLAF-QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD-----FASFKPTY------ 94
W F QL A++ H K I H DIK NV +T+ + L D F S K T
Sbjct: 109 WKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 168
Query: 95 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154
PY Y++PER +E+G + DI+++GC++ E+
Sbjct: 169 TPY------------------YMSPERIHENGYNFK----------SDIWSLGCLLYEMA 200
Query: 155 -LEVPFF-ELSHLLAY----RRGQYDP------SQHLEKIPDSGIRKMILHMIQLEPELR 202
L+ PF+ + +L + + Y P S+ L R ++ I +PE R
Sbjct: 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL--------RDLVSRCINPDPEKR 252
Query: 203 FSAESYLQ 210
LQ
Sbjct: 253 PDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.002
Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 49/203 (24%)
Query: 16 DKAAYLLRQY-----FFNSLR--DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68
D YL+ +Y F+ LR R P ++ A Q++LA++ H I + D
Sbjct: 73 DSNLYLVMEYVPGGELFSHLRKSGRFPEP------VARFYAAQVVLALEYLHSLDIVYRD 126
Query: 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC----YLAPERFYE 124
+K EN+L+ S ++ ++DF F+ LC YLAPE
Sbjct: 127 LKPENLLLDSDGYIKITDFG--------------FAKRVKGRTYTLCGTPEYLAPEIILS 172
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR---GQYDPSQHLE 180
G V D +A+G +I E+ PFF+ + + Y + G+
Sbjct: 173 KGYGKAV----------DWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFF- 221
Query: 181 KIPDSGIRKMILHMIQLEPELRF 203
+ +I +++Q++ R
Sbjct: 222 ---SPDAKDLIRNLLQVDLTKRL 241
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.002
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 24/129 (18%)
Query: 26 FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 85
+F+S + S + FQLL + CH + H D+K +N+L+ L L+
Sbjct: 88 YFDSCNGDIDPEIVKSFM------FQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA 141
Query: 86 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL-KPSMDIF 144
DF + IP +S T L Y P+ V A L S+D++
Sbjct: 142 DFGLARAFGIPV---RCYSAEVVT----LWYRPPD----------VLFGAKLYSTSIDMW 184
Query: 145 AVGCVIAEL 153
+ GC+ AEL
Sbjct: 185 SAGCIFAEL 193
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|202500 pfam02985, HEAT, HEAT repeat | Back alignment and domain information |
|---|
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 458 VLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
+LP ++ +L+DP VR AA E L + ++
Sbjct: 1 LLPLLLELLNDPDPEVREAAAEALGALAEVL 31
|
The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). Length = 31 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.004
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 47 WLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 106
+L +Q+L +K H GI H D+K N++V S L + DF + + SF
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFM 174
Query: 107 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL 166
Y APE G K ++DI++VGC++ E+ + H +
Sbjct: 175 MTPYVVTRYYRAPEVILGMG----------YKENVDIWSVGCIMGEM--------VRHKI 216
Query: 167 AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN---YAAVVFPTYFSP 223
+ Y K+ + M +L+P +R +Y++N YA + FP F
Sbjct: 217 LFPGRDY--IDQWNKVIEQLGTPCPEFMKKLQPTVR----NYVENRPKYAGLTFPKLFPD 270
Query: 224 FLHNFYCCWNPLHSDMRVAMCRSVFPEIL 252
L + H+ ++ + R + ++L
Sbjct: 271 SLFPA----DSEHNKLKASQARDLLSKML 295
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.004
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 25/131 (19%)
Query: 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 110
Q+L + H +GI H DIK N+LV + + +SDF K S T
Sbjct: 114 QILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN-------SLSTKTN 166
Query: 111 GKR------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELS 163
G R + ++APE V + DI+++GC++ E+ PF + +
Sbjct: 167 GARPSLQGSVFWMAPE----------VVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216
Query: 164 HLLA-YRRGQY 173
L A ++ G+
Sbjct: 217 QLQAIFKIGEN 227
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.004
Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 47/228 (20%)
Query: 15 TDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
T+K+ L+ +Y L+ L +++ K FQLL + CH + + H D+K +N
Sbjct: 75 TEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQN 134
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQ 133
+L+ L L+DF + IP S+ L Y P+ G +
Sbjct: 135 LLINERGELKLADFGLARAKSIPTKTYSNEVV-------TLWYRPPDILL---GSTDYST 184
Query: 134 DAPLKPSMDIFAVGCVIAELFLEVPFF------ELSHLL--------------------- 166
+D++ VGC+ E+ P F E H +
Sbjct: 185 ------QIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238
Query: 167 -AYRRGQYDPSQHLEKIP--DSGIRKMILHMIQLEPELRFSAESYLQN 211
+Y +Y P DS +++ ++Q E R SAE +++
Sbjct: 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1472 | |||
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 100.0 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.98 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.98 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.98 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.98 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.98 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.98 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.97 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.97 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.97 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.97 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.96 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.96 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.96 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.96 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.96 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.96 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.96 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.96 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.96 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.96 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.96 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.96 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.96 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.96 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.96 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.95 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.95 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.95 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.95 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.95 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.95 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.95 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.95 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.95 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.95 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.95 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.95 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.95 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.95 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.95 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.95 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.95 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.95 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.95 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.94 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.94 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.94 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.94 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.94 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.94 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.94 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.94 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.94 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.94 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.94 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.94 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.94 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.94 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.94 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.94 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.94 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.94 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.94 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.94 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.94 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.94 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.94 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.94 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.94 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.94 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.94 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.94 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.94 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.94 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.94 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.93 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.93 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.93 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.93 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.93 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.93 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.93 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.93 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.93 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.93 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.93 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.93 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.93 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.93 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.93 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.93 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.93 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.93 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.93 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.93 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.93 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.93 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.93 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.93 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.93 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.93 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.93 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.93 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.93 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.93 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.93 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.93 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.93 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.93 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.93 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.93 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.93 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.93 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.93 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.93 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.93 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.93 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.93 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.93 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.93 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.93 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.93 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.93 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.93 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.93 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.93 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.93 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.93 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.93 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.93 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.93 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.93 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.92 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.92 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.92 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.92 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.92 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.92 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.92 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.92 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.92 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.92 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.92 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.92 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.92 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.92 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.92 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.92 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.92 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.92 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.92 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.92 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.92 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.92 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.92 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.92 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.92 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.92 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.92 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.92 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.92 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.92 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.92 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.92 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.92 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.92 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.92 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.92 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.91 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.91 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.91 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.91 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.91 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.91 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.91 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.91 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.91 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.91 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.91 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.91 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.91 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.91 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.91 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.91 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.91 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.91 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.91 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.91 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.91 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.91 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.91 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.9 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.9 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.9 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.9 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.9 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.9 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.9 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.9 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.9 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.89 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.89 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.89 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.89 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.89 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.89 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.89 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.89 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.89 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.89 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.89 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.89 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.89 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.89 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.88 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.88 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.88 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.88 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.88 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.88 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.88 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.88 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.88 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.88 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.87 | |
| KOG1036 | 323 | consensus Mitotic spindle checkpoint protein BUB3, | 99.87 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.87 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.87 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.87 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.87 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.87 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.87 | |
| PTZ00420 | 568 | coronin; Provisional | 99.87 | |
| PTZ00421 | 493 | coronin; Provisional | 99.87 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.87 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.87 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.86 | |
| PTZ00421 | 493 | coronin; Provisional | 99.86 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 99.86 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.86 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.86 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.86 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 99.86 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.86 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.86 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.86 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.85 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.85 | |
| PTZ00420 | 568 | coronin; Provisional | 99.85 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.85 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.85 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.85 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.85 | |
| KOG0639 | 705 | consensus Transducin-like enhancer of split protei | 99.84 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.84 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.84 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.84 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.84 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.84 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.83 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.83 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.83 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.83 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.83 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.83 | |
| KOG0646 | 476 | consensus WD40 repeat protein [General function pr | 99.82 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.82 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.82 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.82 | |
| KOG0269 | 839 | consensus WD40 repeat-containing protein [Function | 99.81 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.81 |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-211 Score=1892.56 Aligned_cols=1327 Identities=40% Similarity=0.620 Sum_probs=974.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
++|||+++|..+.+++++.|||++|+..+|||+|+.||+|...|++||++||++||..||+.||+|||||.|||||++|+
T Consensus 78 ~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWN 157 (1431)
T KOG1240|consen 78 MKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWN 157 (1431)
T ss_pred hcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCC-CCccchHHHHHHHHHHHHhC-CC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP-LKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~-~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
|+.|+||+.+||+++|+|+|++|.+||+|++++.||+|||+|....+...+.+... ++++|||||+||+++|||+. .|
T Consensus 158 W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 158 WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999997664444445555 89999999999999999986 99
Q ss_pred CCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCCCCChhhhhhhhccCCCCC
Q 000470 159 FFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHS 237 (1472)
Q Consensus 159 pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~l~~~~~~~~~~~~ 237 (1472)
+|+++++.+|+++ .+.+...+.++.+..+++||..|+++||++|.+|+++|+.+++..||+|||+||++|+.++.++..
T Consensus 238 lF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~~ 317 (1431)
T KOG1240|consen 238 LFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLTT 317 (1431)
T ss_pred cccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCccc
Confidence 9999999999998 555667888999999999999999999999999999999999999999999999999999988763
Q ss_pred cchhhhhccchHHHHHhhhCCCCCCCCCCCCCCCCccCchhhHHHHHHHHhHHHHHHHhhHHHHHhhhcccchhhhcccc
Q 000470 238 DMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDI 317 (1472)
Q Consensus 238 ~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1472)
...+. ...-....++. .++..++-.++ .+.|+
T Consensus 318 ~~p~~-------------~~~~~gs~i~d---------~~~~~~~p~n~--------------------------~~~~~ 349 (1431)
T KOG1240|consen 318 STPIS-------------DNTCTGSTIED---------NVKLLDGPTNK--------------------------IYRDF 349 (1431)
T ss_pred cCccc-------------cccccCccccc---------ccccccCcccc--------------------------hhhhh
Confidence 22211 01111111110 00000000011 22344
Q ss_pred cccccCCCCCCccCCCCCCCCCCCCCcccccccCccccccchhhhhhhhhhhcCCCCcccccccccccccccccCCCCCC
Q 000470 318 STLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDT 397 (1472)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (1472)
..+|+.....-.+. .+. ..+.++.+..+.+....+.+++.......++-.....|++.++.
T Consensus 350 ~~~~h~ln~~~~~~-----------------~~~--~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~~~~~ 410 (1431)
T KOG1240|consen 350 SQICHCLNFPLIKD-----------------GGT--ITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTARSSP 410 (1431)
T ss_pred hccccccccccccc-----------------ccc--ccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccccCCc
Confidence 44444433211110 000 01122333333333322222222222222221222244443322
Q ss_pred CCCCCCCCCCCCcccccchhhhHHHHhhhcccCCchhHHHHHHHHHHHhccCCcccccccccceeeecccCCcchhHHHH
Q 000470 398 FGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAA 477 (1472)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~i~ls~i~s~~R~~~~~~sk~~al~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~a 477 (1472)
+ ....+++|++||+++||||||+++.+++|++||+||..||+|++||.||||||||+|+|+.|+.+.|||+|
T Consensus 411 ~--------~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~A 482 (1431)
T KOG1240|consen 411 N--------IKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATA 482 (1431)
T ss_pred c--------cCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHH
Confidence 1 12467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccCCCCCcccccccccccCCCCCC-CCchhhHHHHhhhHHHHHHHHHHHHHHHHhhhcccccccCCCC
Q 000470 478 LETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDD-PEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPH 556 (1472)
Q Consensus 478 l~~lt~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d-~~~~vr~~~A~~l~~La~~a~rfl~~~~~~~~~~~~~~~~~~~ 556 (1472)
|+|||++|.+|+.+||+|+|||||||||.|++|+.| ...+||+|||+||+.||.||.||||.+|.++..|.++..++.
T Consensus 483 l~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nse- 561 (1431)
T KOG1240|consen 483 LETLTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSE- 561 (1431)
T ss_pred HHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccc-
Confidence 999999999999999999999999999999999999 789999999999999999999999999999988877654321
Q ss_pred CCCCCCCccchhhhccChHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHhcccchhcccCcccccccccccccccccC
Q 000470 557 KSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLND 636 (1472)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd 636 (1472)
...+. ++++++++|++.+++.|++||+| +++.||||||++|.+||+||||+|+||+|||||||||||
T Consensus 562 ---------t~~~~--~~~~~~~~L~~~V~~~v~sLlsd--~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLND 628 (1431)
T KOG1240|consen 562 ---------TAPEQ--NYNTELQALHHTVEQMVSSLLSD--SPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLND 628 (1431)
T ss_pred ---------ccccc--ccchHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcC
Confidence 11223 34679999999999999999995 679999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhccceeeeeeccchhhHhHHHHHHhhcCCCchHHHHHHHHHHHHHHHcCCCchHHHHHHHHhhccccccC
Q 000470 637 RDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYP 716 (1472)
Q Consensus 637 ~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~ee~Vv~~~l~~l~~l~~~gL~~k~~~~~~~~~~~~ll~HP 716 (1472)
|||+||+||||+|+|||.||||+|+|+||||||+|||+|+||+||++||+||+.|||+|||+|+++.|++..|+||||||
T Consensus 629 kDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~hP 708 (1431)
T KOG1240|consen 629 KDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCHP 708 (1431)
T ss_pred ccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCccceeEEEeeccccccccCCCccCCHHHHHhccCCCCcHHHHHHHHHHhh-hchHHHHHh
Q 000470 717 SQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENAR-SSDMLERQR 795 (1472)
Q Consensus 717 n~wIR~~~~~~i~~~~~~l~~ad~~c~l~P~l~p~l~~~~~~~~~~~~ll~~l~~p~sr~v~~~~~~~~~-~~~~~~~~~ 795 (1472)
|.|||+++++||++++++|+.|||||+|||+|||||+.++.++.+++.|++||||||||+||+++++|.. ...-..-++
T Consensus 709 N~WIR~~~~~iI~~~~~~ls~advyc~l~P~irpfl~~~v~~i~s~~~LlsclkpPVsRsv~~~l~r~~~ens~f~k~l~ 788 (1431)
T KOG1240|consen 709 NLWIRRAVLGIIAAIARQLSAADVYCKLMPLIRPFLERPVIQIESKEVLLSCLKPPVSRSVFNQLLRWSDENSSFWKKLL 788 (1431)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhhheEEeehhhHHhhhccHhhhcchHHHHHHhcCCCcHHHHHHHHHHhhcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 222123334
Q ss_pred hhhcccCCCchhhhhhHhhhcCCCcccccc---------cCCcccCCcCCCCCCCCCCCCCcccCCCcChhhhHhhcccc
Q 000470 796 KIWYNTSSQSKQQETADLLKRGAEDLSSIK---------CWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSL 866 (1472)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~ 866 (1472)
..|+..+.+++.|..++...+..+...+-. ...+++++.++.... + -.+.+++.|+..+++.+
T Consensus 789 ~~~~~s~~~s~d~~~~~~~~k~~g~l~~~e~~~~~~~~~~~~~~i~S~~~~e~~-------e-~~l~~k~~~~~~~r~~~ 860 (1431)
T KOG1240|consen 789 ERHYSSSGNSRDEFIKNYSSKRYGFLPFEEGAGSSKWSNTGFKKIKSEGKTELV-------E-DKLLEKDIFLIRSRKPK 860 (1431)
T ss_pred HHhhhccCccchhhhhcchhhhcccCCccccccchhhhhhhcceeecccccccc-------c-cccchhchhhhcccCCc
Confidence 455555555555443222111111111111 111111111111110 0 01223344444444432
Q ss_pred hhccCccccCCCCCCC-ccccccccccccccccCccccCCCCCCCCcccccccccccCCCCccccccccccccccCCCCC
Q 000470 867 VYNASSMADIRDPLCP-EKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTM 945 (1472)
Q Consensus 867 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1472)
........ -.+...+ +.....++...++.+.+... .+..++..++..|....++...........+.+.+++.+.
T Consensus 861 ~~~s~~~~-l~d~~~~~~~~~~~~v~~~~~n~~~t~~---~P~~~~~~~~~~d~n~~~~~~~~~~~~n~~~~l~~~~~~~ 936 (1431)
T KOG1240|consen 861 SNISNRVL-LDDPAYPRNTNGREGVLTRQVNLVGTII---EPSNIHARVRRKDSNREGNESNMESPQNSKHLLPIGSPNK 936 (1431)
T ss_pred cchhhhhh-hcCcccccccCCceeeeccccccccccc---ccccchhhhhhhhccccCCCccccCCCcchhhccCCCCCc
Confidence 21111110 0111111 11111222222221111111 1222333333333222221111011111112222222111
Q ss_pred CCCCcccCCCC-CCC-CCCCCCCccCCccccCCCCccceeeccCCCCCccc-cccccccCCCCCCCCCcccccccccCCC
Q 000470 946 PWMDTTNQSFS-LAS-SVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQ-MASVNCKFPEMGTSGTAKGSSINVEDAS 1022 (1472)
Q Consensus 946 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1472)
.|.+ |.... +.. +.+-...+++++......+..+.+.+...++.+.+ ...+.+...++++...++.......+..
T Consensus 937 ~~~~--~~~~~t~~~~~~~vp~~ts~~~~~~t~~~~~~~~~p~~ns~~~~~~~r~~~~~~dL~~~~~~~~~~~ss~~~s~ 1014 (1431)
T KOG1240|consen 937 LNHT--GSPRSTLLLDGNSVPTLTSSSVRVVTNLKPTKPVMPVPNSTANNQVERSLTCLNDLEMLTVSIPKRPSSESISH 1014 (1431)
T ss_pred cccc--CCCcccccccCCccceeeccceeeeeccCCcccccccCCCCcccchhHHHHHHHhhhhhhhhcccccchhhccc
Confidence 1111 11000 000 00001111222222222222222233333332221 1233444555565555554443333321
Q ss_pred CCCCCCCCCccccccCCCCCCcccccceeeeccccccceeEEEEcCCC-CEEEEEeCCCCEEEEeCCCCccc-cccccce
Q 000470 1023 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKD-ISFRSRL 1100 (1472)
Q Consensus 1023 ~~~~~~g~~~~~~~~~~~~~~W~p~G~lV~~l~~H~~~V~~lafspd~-~~laSgS~DGtVkvWD~~~~e~~-~~~~~~~ 1100 (1472)
.-.+.+.|..... ..++++|+|+|.+|+||+||+..|+.++.++++ .+|+|||+||+||+||+++.++. .++++++
T Consensus 1015 -p~~~~~ep~~~~~-~~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~l 1092 (1431)
T KOG1240|consen 1015 -PCLLNSEPSAWSV-GSPPPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSEL 1092 (1431)
T ss_pred -hhhhccCCchhhc-CCCCCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeE
Confidence 1111121222211 356789999999999999999999999998765 89999999999999999998876 8899999
Q ss_pred EEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec-CCCCcEEEEEEecCCCCCceE
Q 000470 1101 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD-TKEGAIVTLVNYNTDNCASHM 1179 (1472)
Q Consensus 1101 t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~s~~~ 1179 (1472)
+|...++++.++.++++++.+|+++.||.|++.+++.. ...++... ..+..+ ...|..+.+.+|..+.++ ..
T Consensus 1093 tys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~-----~~~~~~~~-~~ri~n~~~~g~vv~m~a~~~~~~S-~~ 1165 (1431)
T KOG1240|consen 1093 TYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHY-----NVSKRVAT-QVRIPNLKKDGVVVSMHAFTAIVQS-HV 1165 (1431)
T ss_pred EEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccc-----ccccceee-eeecccccCCCceEEeecccccccc-ee
Confidence 99988889999999999999999999999999999842 12222222 233333 356778889888887654 68
Q ss_pred EEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEE
Q 000470 1180 FMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1259 (1472)
Q Consensus 1180 L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~ 1259 (1472)
++++|..+.|..||+|+...+|++++...+|.|+++|.||.++|+++||+.|.+.+||+||+.++.+|.+++..+|+++.
T Consensus 1166 lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~ 1245 (1431)
T KOG1240|consen 1166 LVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW 1245 (1431)
T ss_pred EEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCccccCCCCEEEEEE-cCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccc
Q 000470 1260 LFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1338 (1472)
Q Consensus 1260 ~~~p~~~~~~~~~~~~~l~vas-~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1338 (1472)
. +|.... ....+.+++ +.++|.+|++++|.|..+++.++. .+.. .+. .|.+.
T Consensus 1246 ~-~~~~~~-----~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~--~p~l---s~~--~Ps~~-------------- 1298 (1431)
T KOG1240|consen 1246 L-CPTYPQ-----ESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDG--APIL---SYA--LPSND-------------- 1298 (1431)
T ss_pred e-eccCCC-----CceEEEecccCCCceeeeecccCcceEEEEcCCC--Ccch---hhh--ccccc--------------
Confidence 8 665430 122344444 678999999999999999997632 1111 111 11110
Q ss_pred ccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCc-eEEeCCCCCCCCCCcceEEeecCceEEEEeee
Q 000470 1339 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRS-YCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1417 (1472)
Q Consensus 1339 ~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s-~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1417 (1472)
....+...++.|....++|+++|||+|++||.||...++.+ +.+.|+.........+|..+..+|.++++|..
T Consensus 1299 ------~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i 1372 (1431)
T KOG1240|consen 1299 ------ARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFI 1372 (1431)
T ss_pred ------CCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhh
Confidence 00123344677777778889999999999999999999998 77777766555678899999999999999965
Q ss_pred cCCcchhhh----hHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1418 RQPLTSKLT----AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1418 ~~~~~~~~~----~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..+.+...+ .....+....++..+|+|.|+|++.+..++.+|+++|+||+|||||
T Consensus 1373 ~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1373 IYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 544433332 1222333344566789999999998888899999999999999997
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=457.64 Aligned_cols=308 Identities=14% Similarity=0.176 Sum_probs=221.7
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccc-c-cccceEEeccCCceEEEEEec-CCCEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~-~-~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~ 1129 (1472)
.+..|.+.|++++|+|++++|||||.||+|+|||........ . ........ +...+.+++|++ +++.|++++.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 355699999999999999999999999999999986432110 0 01122233 345699999987 4789999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|++||+.+. ..+. ....|...|.++.|+|.. +.+|++|+.||+|++||++++....++.. .
T Consensus 557 v~lWd~~~~-------------~~~~-~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~---~ 617 (793)
T PLN00181 557 VQVWDVARS-------------QLVT-EMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT---K 617 (793)
T ss_pred EEEEECCCC-------------eEEE-EecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEEEEEec---C
Confidence 999999731 0112 223456678888999743 56999999999999999999988877764 4
Q ss_pred cceEEEEEc-CCCCEEEEEeCCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1210 GYVSSLVTG-PCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1210 g~Itsl~~s-p~g~~LvsGssdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
..+.++.|. ++|.+|++|+.||.|++||++... ++..+. .|...|..+.| .+ +.++++++.|+.|+
T Consensus 618 ~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f-~~----------~~~lvs~s~D~~ik 685 (793)
T PLN00181 618 ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRF-VD----------SSTLVSSSTDNTLK 685 (793)
T ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEE-eC----------CCEEEEEECCCEEE
Confidence 679999995 579999999999999999999765 344443 46678888888 32 34789999999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll 1366 (1472)
+||+.++.... . . ..+....+|...+.++.+++++ +++
T Consensus 686 iWd~~~~~~~~-----~---~---------------------------------~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 686 LWDLSMSISGI-----N---E---------------------------------TPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred EEeCCCCcccc-----C---C---------------------------------cceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 99987531000 0 0 0000112445567888999877 778
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccce
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
+|+.|+.|++|+...+.......... .... .......|...|
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~--------------~~~~------------------------~~~~~~~~~~~V 766 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKT--------------IDPV------------------------SGLEVDDASQFI 766 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEeccc--------------CCcc------------------------cccccCCCCcEE
Confidence 99999999999987553321111000 0000 000112377889
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+++ |++++.+|++|+.||.|+||+
T Consensus 767 ~~v~-ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 767 SSVC-WRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEEE-EcCCCCeEEEecCCCcEEEEe
Confidence 9995 999999999999999999996
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=362.27 Aligned_cols=196 Identities=29% Similarity=0.326 Sum_probs=175.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+++++|+.....||||||++ |+|.+++-.++.+.+...+.+++||+.||.|||++||+||||||||||++.+
T Consensus 233 L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 233 LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND 312 (475)
T ss_pred cCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence 689999999999999999999999999 6999999999999999999999999999999999999999999999999877
Q ss_pred ---CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 80 ---NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 80 ---~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
..+||+|||+||... ...++.|.|||+.|.|||++...+.. .+..++|||||||++|-+++|
T Consensus 313 ~e~~llKItDFGlAK~~g--------~~sfm~TlCGTpsYvAPEVl~~kg~~-------~~~~kVDiWSlGcvLfvcLsG 377 (475)
T KOG0615|consen 313 AEDCLLKITDFGLAKVSG--------EGSFMKTLCGTPSYVAPEVLASKGVE-------YYPSKVDIWSLGCVLFVCLSG 377 (475)
T ss_pred CcceEEEecccchhhccc--------cceehhhhcCCccccChhheecCCee-------cccchheeeeccceEEEEecc
Confidence 679999999999763 23467899999999999999755432 345699999999999999999
Q ss_pred CCCCCch-----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELS-----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~-----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|||... -...+.++.|...+..+...+++.++||.+||..||++|||++|+|+|
T Consensus 378 ~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 378 YPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred CCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 9999643 245577888887776777778899999999999999999999999999
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=359.93 Aligned_cols=194 Identities=20% Similarity=0.243 Sum_probs=171.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+|+++||+..++|||.|+|. ++|.++++.++.++|.|++.+++||+.||.|||+++|+|||||..|+|++++
T Consensus 75 L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~ 154 (592)
T KOG0575|consen 75 LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNEN 154 (592)
T ss_pred cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCc
Confidence 689999999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+|||+|||+|.....++.. -.|.||||.|+|||++. ...++..+||||+||++|.|+.|+||
T Consensus 155 ~~VKIgDFGLAt~le~~~Er-------k~TlCGTPNYIAPEVl~----------k~gHsfEvDiWSlGcvmYtLL~G~PP 217 (592)
T KOG0575|consen 155 MNVKIGDFGLATQLEYDGER-------KKTLCGTPNYIAPEVLN----------KSGHSFEVDIWSLGCVMYTLLVGRPP 217 (592)
T ss_pred CcEEecccceeeeecCcccc-------cceecCCCcccChhHhc----------cCCCCCchhhhhhhhHHHhhhhCCCC
Confidence 99999999999877544222 25789999999999886 33568899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+...+.+..+........+|...+.++++||.+||+.||.+|||++++|.|
T Consensus 218 Fetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 218 FETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 9987665543333333333555778899999999999999999999999998
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=319.63 Aligned_cols=341 Identities=15% Similarity=0.217 Sum_probs=251.0
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
|--++-+.+.||.++|.+++|+|+|+.+||||.|.|||+||+.+-. +..+..+|...|.|++|+|+|..||+|+
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT------p~~t~KgH~~WVlcvawsPDgk~iASG~ 176 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET------PLFTCKGHKNWVLCVAWSPDGKKIASGS 176 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC------cceeecCCccEEEEEEECCCcchhhccc
Confidence 4456778899999999999999999999999999999999998754 6678889999999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCC--CCCceEEEEEeCCCeEEEEeCCCCCcccee
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD--NCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d--~~s~~~L~~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
.||+|++||..+.. .+......|...|++++|.|- ......|++++.||.|+|||+..++++..+
T Consensus 177 ~dg~I~lwdpktg~-------------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 177 KDGSIRLWDPKTGQ-------------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cCCeEEEecCCCCC-------------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 99999999987411 111223356667888888763 111458999999999999999999999888
Q ss_pred ecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEe----------ecCCCCCcc----
Q 000470 1204 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL----------FVPPPNAAV---- 1269 (1472)
Q Consensus 1204 ~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~----------~~p~~~~~~---- 1269 (1472)
.+ |...|+|++|.-+| ++.+|+.|++|++|+...+.+.+.++. |...|+.+.. |.|.+....
T Consensus 244 sg--HT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkG-HahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 244 SG--HTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKG-HAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred cc--CccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcc-cchheeeeeccchhhhhccccccccccCCChHH
Confidence 77 99999999998665 999999999999999999888887764 5567777765 122222100
Q ss_pred ------------ccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccc
Q 000470 1270 ------------STTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVN 1336 (1472)
Q Consensus 1270 ------------~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1336 (1472)
-...+..+++|+.|.++.+|+-...+ ++.....+.. -.+...+++ ..+. .......
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~----lVn~V~fSP---d~r~----IASaSFD 388 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQA----LVNHVSFSP---DGRY----IASASFD 388 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhh----heeeEEECC---CccE----EEEeecc
Confidence 00112358888888899999864322 3222221111 111111111 1000 0000000
Q ss_pred cccccc------ccCCCCCCcCCceEeccCCCCc-EEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCc
Q 000470 1337 QKYRVD------ELNEPPPRLLGIRSLLPLPGGD-LLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSG 1409 (1472)
Q Consensus 1337 ~~~~~~------~l~~~~~~~~~V~sl~~~p~g~-llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~ 1409 (1472)
...+++ .+..+.+|...|+.++|+.|.+ +++|+.|.++++||+.+.+..+
T Consensus 389 kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~----------------------- 445 (480)
T KOG0271|consen 389 KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ----------------------- 445 (480)
T ss_pred cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc-----------------------
Confidence 111221 2334578889999999999984 5599999999999998765533
Q ss_pred eEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1410 VQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1410 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+.||.|.|.+| .|+++|..++||+.|.++++|+
T Consensus 446 ----------------------------DLpGh~DEVf~v-DwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 446 ----------------------------DLPGHADEVFAV-DWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ----------------------------cCCCCCceEEEE-EecCCCceeecCCCceEEEeec
Confidence 234599999999 5999999999999999999996
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=335.14 Aligned_cols=192 Identities=21% Similarity=0.170 Sum_probs=168.3
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~ 77 (1472)
++||+||.||+.|..+. .++|+||||+ |+|.+.++..+.++|.....|+.|+++||.|||+ ++||||||||+|||++
T Consensus 134 ~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN 213 (364)
T KOG0581|consen 134 CQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN 213 (364)
T ss_pred CCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec
Confidence 57999999999999998 5999999999 7999999988889999999999999999999996 9999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+.|.|||||||.++..... ...+..||..|||||++. +..|+.++||||||+.+.|+++|+
T Consensus 214 skGeVKicDFGVS~~lvnS---------~a~tfvGT~~YMsPERi~----------g~~Ys~~sDIWSLGLsllE~a~Gr 274 (364)
T KOG0581|consen 214 SKGEVKICDFGVSGILVNS---------IANTFVGTSAYMSPERIS----------GESYSVKSDIWSLGLSLLELAIGR 274 (364)
T ss_pred cCCCEEeccccccHHhhhh---------hcccccccccccChhhhc----------CCcCCcccceecccHHHHHHhhCC
Confidence 9999999999998866321 346788999999999986 447888999999999999999998
Q ss_pred CCCCch-----HHHH-HHhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS-----HLLA-YRRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~-----~~~~-~~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||... .... +......+.+.++. ..++++++||..||++||.+|+++.|+++|
T Consensus 275 fP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 275 FPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 888653 2233 33344445666776 489999999999999999999999999998
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=338.35 Aligned_cols=200 Identities=21% Similarity=0.270 Sum_probs=171.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||-|++++..|+++..+|+|+||++ |+|.++|++.+.|++..++.++.||+.||+|||++|||||||||||||++.+|
T Consensus 132 ~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 132 GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC
Confidence 79999999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCC---C---CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 81 WLYLSDFASFKPTYIPYDDPS---D---FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~---~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++||+|||.++.......... . ......+.+||..|.+||++. +...++.+|||+||||+|+|+
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~----------~~~~~~~sDiWAlGCilyQml 281 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN----------DSPAGPSSDLWALGCILYQML 281 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc----------CCCCCcccchHHHHHHHHHHh
Confidence 999999999997643322210 1 111124567999999999876 446788999999999999999
Q ss_pred hCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 155 LEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|+|||...+...+.+........++...++.+++||.++|.+||.+|++++||.+|
T Consensus 282 aG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 282 AGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 999999876654444444444444666677899999999999999999999999998
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=345.47 Aligned_cols=194 Identities=21% Similarity=0.244 Sum_probs=173.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||||+++|+++++..++|+|.||++ |.|++++..++.|++.|+..+++||+.|+.|||..+||||||||||+|++..
T Consensus 69 i~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~ 148 (786)
T KOG0588|consen 69 IEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVK 148 (786)
T ss_pred hcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcc
Confidence 579999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+++||+|||+|-... ....+.|.||++.|.|||++.+..++ +.++||||+|+|||.|++|+.|
T Consensus 149 ~nIKIADFGMAsLe~--------~gklLeTSCGSPHYA~PEIV~G~pYd---------G~~sDVWSCGVILfALLtG~LP 211 (786)
T KOG0588|consen 149 NNIKIADFGMASLEV--------PGKLLETSCGSPHYAAPEIVSGRPYD---------GRPSDVWSCGVILFALLTGKLP 211 (786)
T ss_pred cCEeeeccceeeccc--------CCccccccCCCcccCCchhhcCCCCC---------CCccccchhHHHHHHHHhCCCC
Confidence 999999999986431 23357899999999999998755433 6789999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+..++..+.........++|...+.++++||.+||..||++|+|.+|+++|
T Consensus 212 FdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 212 FDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 9988776554444444445677788999999999999999999999999999
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=311.48 Aligned_cols=199 Identities=22% Similarity=0.223 Sum_probs=173.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+.++++|+++...++|+|.|+ |.|+|++...-.+++.+.+.|++||+.|+.|||.++||||||||||||++++
T Consensus 80 ~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn 159 (411)
T KOG0599|consen 80 MGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN 159 (411)
T ss_pred cCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc
Confidence 589999999999999999999999999 9999999999899999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+++|+|||+++.....+ -+...||||.|+|||.+.++-++ ....|+..+|+|++|+|+|.|+.|.||
T Consensus 160 ~~i~isDFGFa~~l~~Ge--------kLrelCGTPgYLAPEtikC~m~e----~~pGYs~EVD~Wa~GVImyTLLaGcpP 227 (411)
T KOG0599|consen 160 MNIKISDFGFACQLEPGE--------KLRELCGTPGYLAPETIKCSMYE----NHPGYSKEVDEWACGVIMYTLLAGCPP 227 (411)
T ss_pred cceEEeccceeeccCCch--------hHHHhcCCCcccChhheeeeccc----CCCCccchhhHHHHHHHHHHHHcCCCc
Confidence 999999999998763222 24677899999999999765443 345799999999999999999999887
Q ss_pred CC-chHH---HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHL---LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~---~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|- ..++ ..+..+.|.....-+...+...++||.+||+.||.+|+|++|+|.|
T Consensus 228 FwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 228 FWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 74 3343 3355677876554444556679999999999999999999999999
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=313.53 Aligned_cols=283 Identities=17% Similarity=0.239 Sum_probs=242.9
Q ss_pred cccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC--CCEEEEEeCCCcEEE
Q 000470 1055 QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH--SAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1055 ~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~--~~~las~s~DG~I~v 1132 (1472)
-+-+.+|..+.||+|++.|||||.+|.+|||...++. ..+++.+|.+.|.++.|+|. +..+|+|+.||++++
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc------eeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 3567889999999999999999999999999998875 67889999999999999996 568999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccce
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYV 1212 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~I 1212 (1472)
|+++... .+ .-..+|...|.-++|+|+ |++|++++.|.+-++||++++......++ |...|
T Consensus 246 w~~~~e~-------------~l-~~l~gH~~RVs~VafHPs---G~~L~TasfD~tWRlWD~~tk~ElL~QEG--Hs~~v 306 (459)
T KOG0272|consen 246 WKLSQET-------------PL-QDLEGHLARVSRVAFHPS---GKFLGTASFDSTWRLWDLETKSELLLQEG--HSKGV 306 (459)
T ss_pred eccCCCc-------------ch-hhhhcchhhheeeeecCC---CceeeecccccchhhcccccchhhHhhcc--ccccc
Confidence 9998310 11 112356677888899999 89999999999999999999988766665 89999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000470 1213 SSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1213 tsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~ 1292 (1472)
.+++|.|+|..+++|+-|..-++||+|++.++..+.. |..+|..+.| +|++ ..+++|++|++++|||++
T Consensus 307 ~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~f-sPNG---------y~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 307 FSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAF-SPNG---------YHLATGSSDNTCKVWDLR 375 (459)
T ss_pred ceeEecCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeE-CCCc---------eEEeecCCCCcEEEeeec
Confidence 9999999999999999999999999999999988876 8889999999 7765 489999999999999999
Q ss_pred CCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC-CC-cEEEccC
Q 000470 1293 NGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GG-DLLTGGT 1370 (1472)
Q Consensus 1293 t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p-~g-~llTgg~ 1370 (1472)
..++..++. +|..-|..+.|.| .| +|+|+|.
T Consensus 376 ~r~~ly~ip-----------------------------------------------AH~nlVS~Vk~~p~~g~fL~Tasy 408 (459)
T KOG0272|consen 376 MRSELYTIP-----------------------------------------------AHSNLVSQVKYSPQEGYFLVTASY 408 (459)
T ss_pred ccccceecc-----------------------------------------------cccchhhheEecccCCeEEEEccc
Confidence 876644332 3444688899998 44 7889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1450 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1450 (1472)
|+++++|...+-.....+. ||.+.|.+++
T Consensus 409 D~t~kiWs~~~~~~~ksLa---------------------------------------------------GHe~kV~s~D 437 (459)
T KOG0272|consen 409 DNTVKIWSTRTWSPLKSLA---------------------------------------------------GHEGKVISLD 437 (459)
T ss_pred CcceeeecCCCcccchhhc---------------------------------------------------CCccceEEEE
Confidence 9999999977666554443 4999999995
Q ss_pred eeecCCcEEEEEcCCceEEEcC
Q 000470 1451 SVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1451 ~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+++++.+++|+|.|.+||+|.
T Consensus 438 -is~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 438 -ISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred -eccCCceEEEeccCceeeecc
Confidence 999999999999999999994
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=320.53 Aligned_cols=194 Identities=20% Similarity=0.245 Sum_probs=170.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||.||+++..|++.+.+|||+||+. |.|+-.|.+.+.+++..++.++.+|+.||.|||++|||||||||||||++..
T Consensus 82 v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~ 161 (357)
T KOG0598|consen 82 IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ 161 (357)
T ss_pred CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC
Confidence 589999999999999999999999999 5999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|+++|+|||+++.....++ ...+.|||+.|||||++. +..|+.++|.||||+++|||++|.||
T Consensus 162 GHi~LtDFgL~k~~~~~~~-------~t~tfcGT~eYmAPEil~----------~~gy~~~vDWWsLGillYeML~G~pP 224 (357)
T KOG0598|consen 162 GHIKLTDFGLCKEDLKDGD-------ATRTFCGTPEYMAPEILL----------GKGYDKAVDWWSLGILLYEMLTGKPP 224 (357)
T ss_pred CcEEEeccccchhcccCCC-------ccccccCCccccChHHHh----------cCCCCcccchHhHHHHHHHHhhCCCC
Confidence 9999999999985532222 235679999999999887 34789999999999999999999999
Q ss_pred CCchHHHHHHhcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCC----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRF----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 211 (1472)
|...+..++........ ...+...+.+++++|.++|.+||++|. .++++-+|
T Consensus 225 F~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 225 FYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred CcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 99888766655444433 556666788999999999999999996 57777766
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=327.09 Aligned_cols=194 Identities=20% Similarity=0.326 Sum_probs=160.6
Q ss_pred CC-CCCcceeeEEEEeCC-eEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MS-STPCVHKKFWQETDK-AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~-HpNIv~~~~~~~~~~-~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+ ||||+++.+++.+.. .+|+|||||+.+||++++.|. .+++..++.|++||++||+|+|++|+.|||+||||||+.
T Consensus 65 ln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~ 144 (538)
T KOG0661|consen 65 LNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS 144 (538)
T ss_pred cCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec
Confidence 46 999999999998766 999999999999999999865 499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
....+||+|||+|+..... ..+ .....|++|+|||+++.. ..|+.++|||++|||++|+++-+
T Consensus 145 ~~~~iKiaDFGLARev~Sk----pPY----TeYVSTRWYRAPEvLLrs---------~~Ys~pvD~wA~GcI~aEl~sLr 207 (538)
T KOG0661|consen 145 GNDVIKIADFGLAREVRSK----PPY----TEYVSTRWYRAPEVLLRS---------GYYSSPVDMWAVGCIMAELYSLR 207 (538)
T ss_pred ccceeEecccccccccccC----CCc----chhhhcccccchHHhhhc---------cccCCchHHHHHHHHHHHHHHhc
Confidence 9899999999999977432 122 334458899999998743 47899999999999999999999
Q ss_pred CCCCch----HHHHHHhcCCCC--------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 158 PFFELS----HLLAYRRGQYDP--------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 158 ~pf~~~----~~~~~~~~~~~~--------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|+|.+. ++.++......| ...+-...+.++.+||.+|+.+||++||||+|
T Consensus 208 PLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~ 287 (538)
T KOG0661|consen 208 PLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ 287 (538)
T ss_pred ccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence 999643 333332211110 01122235678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|+|
T Consensus 288 al~~ 291 (538)
T KOG0661|consen 288 ALQH 291 (538)
T ss_pred HhcC
Confidence 9998
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=313.64 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=164.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||+|.+.++|...+..+||+|||+.++.+-+...+ .++...++.+++|++.|+.|||+++|+||||||||||++..
T Consensus 58 LkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~ 137 (396)
T KOG0593|consen 58 LKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN 137 (396)
T ss_pred cccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC
Confidence 68999999999999999999999999988777776644 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||||||+|+....|.+.- .....|.+|+|||.+. .+.+|++.+|||++||+++||++|.|.
T Consensus 138 gvvKLCDFGFAR~L~~pgd~Y-------TDYVATRWYRaPELLv---------GDtqYG~pVDiWAiGCv~aEl~~G~pL 201 (396)
T KOG0593|consen 138 GVVKLCDFGFARTLSAPGDNY-------TDYVATRWYRAPELLV---------GDTQYGKPVDIWAIGCVFAELLTGEPL 201 (396)
T ss_pred CcEEeccchhhHhhcCCcchh-------hhhhhhhhccChhhhc---------ccCcCCCcccchhhhHHHHHHhcCCcC
Confidence 999999999999875554432 3345688999999885 346899999999999999999999999
Q ss_pred CCch----HHHHHHhc---------------C-----CCCCc-c---cCC---CCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELS----HLLAYRRG---------------Q-----YDPSQ-H---LEK---IPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~----~~~~~~~~---------------~-----~~~~~-~---l~~---~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|.+. ++..+++. . .-|.+ . +.. ..+.-+.+|+.+||+.||++|++.+|+
T Consensus 202 ~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql 281 (396)
T KOG0593|consen 202 WPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL 281 (396)
T ss_pred CCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence 9643 33222211 1 00111 0 111 123467899999999999999999999
Q ss_pred HHHhhcccCCCCCChhhh
Q 000470 209 LQNYAAVVFPTYFSPFLH 226 (1472)
Q Consensus 209 L~~~~~~~fp~~f~~~l~ 226 (1472)
|.| +||..|+.
T Consensus 282 l~H-------~yFd~~~e 292 (396)
T KOG0593|consen 282 LHH-------PYFDGFIE 292 (396)
T ss_pred hcC-------hHHHHHHH
Confidence 999 67755444
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=308.83 Aligned_cols=198 Identities=19% Similarity=0.223 Sum_probs=164.9
Q ss_pred CCCCCcceeeE-EEEe-CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCC
Q 000470 1 MSSTPCVHKKF-WQET-DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHE--KG--ICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~-~~~~-~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~--~g--IvH~DL 69 (1472)
|+|||||+|++ .|.+ ...++||||||. |+|.+.|+. +..+++..++.++.|++.||.+||. .+ |+||||
T Consensus 75 L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDI 154 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDI 154 (375)
T ss_pred cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccC
Confidence 69999999998 4444 445999999999 899998853 5569999999999999999999999 55 999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||.||+++.+|.|||+|||+++..... ..+..+..|||.||+||++. ..+|+.++||||+||+
T Consensus 155 KPaNIFl~~~gvvKLGDfGL~r~l~s~-------~tfA~S~VGTPyYMSPE~i~----------~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 155 KPANIFLTANGVVKLGDFGLGRFLSSK-------TTFAHSLVGTPYYMSPERIH----------ESGYNFKSDIWSLGCL 217 (375)
T ss_pred cchheEEcCCCceeeccchhHhHhcch-------hHHHHhhcCCCcccCHHHHh----------cCCCCcchhHHHHHHH
Confidence 999999999999999999999876321 22346778999999999886 4578999999999999
Q ss_pred HHHHHhCCCCCCchHHHHHHhcCCC-CCcccC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 150 IAELFLEVPFFELSHLLAYRRGQYD-PSQHLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~~~~~~~~-~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
+|||+.-++||.+.++..+.+.... ..+.+| .+.+.++++||..|+..||+.||+...++.+....
T Consensus 218 lyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 218 LYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred HHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 9999999999998887665443322 122244 67788999999999999999999987777775543
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=317.59 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=167.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||||.++++++.++.+|||||||. |+|.+||++++.+++..++.++.||+.||++||+++||||||||+|||++..
T Consensus 66 l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 66 LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT 145 (429)
T ss_pred cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence 689999999999999999999999999 7999999999999999999999999999999999999999999999999875
Q ss_pred ------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 80 ------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 80 ------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
-.+||+|||+++... ...+..+.||++.|||||++. ...|+.|+|+||+|+|+|++
T Consensus 146 ~~~~~~~~LKIADFGfAR~L~--------~~~~a~tlcGSplYMAPEV~~----------~~~YdAKADLWSiG~Ilyq~ 207 (429)
T KOG0595|consen 146 ARNDTSPVLKIADFGFARFLQ--------PGSMAETLCGSPLYMAPEVIM----------SQQYDAKADLWSIGTILYQC 207 (429)
T ss_pred CCCCCCceEEecccchhhhCC--------chhHHHHhhCCccccCHHHHH----------hccccchhhHHHHHHHHHHH
Confidence 358999999999763 233557899999999999875 45789999999999999999
Q ss_pred HhCCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++|++||+.....++. +......+.++...+...++|+...|+++|..|.+.++.+.|
T Consensus 208 l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 208 LTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred HhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 9999999866544433 322333344555666778899999999999999999888876
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=333.10 Aligned_cols=194 Identities=23% Similarity=0.237 Sum_probs=168.2
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-C
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-N 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~-~ 80 (1472)
||||+++++++++...+|+||||+. |+|++++..++++.+.+++.++.||+.|++|||++||+||||||||||++.+ +
T Consensus 79 HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~ 158 (370)
T KOG0583|consen 79 HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG 158 (370)
T ss_pred CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC
Confidence 9999999999999999999999999 5999999998899999999999999999999999999999999999999999 9
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||++.... .......+.+|++.|+|||+|.... ..-+.++||||+|++||.|++|..||
T Consensus 159 ~~Kl~DFG~s~~~~-------~~~~~l~t~cGsp~Y~aPEvl~~~~--------~Y~g~~aDvWS~GViLy~ml~G~~PF 223 (370)
T KOG0583|consen 159 NLKLSDFGLSAISP-------GEDGLLKTFCGSPAYAAPEVLSGKG--------TYSGKAADVWSLGVILYVLLCGRLPF 223 (370)
T ss_pred CEEEeccccccccC-------CCCCcccCCCCCcccCCHHHhCCCC--------CcCCchhhhhhhHHHHHHHHhCCCCC
Confidence 99999999987552 1122457899999999999987432 02258999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..+...+.+........++... ++++++||.+||..||.+|+++.++++|
T Consensus 224 ~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 224 DDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 87765554443434344455555 8999999999999999999999999988
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=280.49 Aligned_cols=294 Identities=22% Similarity=0.332 Sum_probs=247.8
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
..+|+||.+.|+++.|++|+++++|+|.||.+.|||.-+..|. .........|..++|+|.|+.+|+|+-|...
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~------haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKV------HAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccce------eEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 3789999999999999999999999999999999999876643 2333456779999999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
.||++.+.. . .+...+.+....|..-+.++.|-.| ..|++++.|.++.+||+.+++....+.+ |.|
T Consensus 122 siy~ls~~d-~-------~g~~~v~r~l~gHtgylScC~f~dD----~~ilT~SGD~TCalWDie~g~~~~~f~G--H~g 187 (343)
T KOG0286|consen 122 SIYPLSTRD-A-------EGNVRVSRELAGHTGYLSCCRFLDD----NHILTGSGDMTCALWDIETGQQTQVFHG--HTG 187 (343)
T ss_pred EEEeccccc-c-------cccceeeeeecCccceeEEEEEcCC----CceEecCCCceEEEEEcccceEEEEecC--Ccc
Confidence 999997321 0 1112233334455566777778776 2899999999999999999999988876 999
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1211 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
.|.++.+.| +++++++|+.|+..++||+|.+.++.++.. |.+.|+.+.| +|++. -+++|+.|+.+++|
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~f-fP~G~---------afatGSDD~tcRly 256 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRF-FPSGD---------AFATGSDDATCRLY 256 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc-cccccceEEE-ccCCC---------eeeecCCCceeEEE
Confidence 999999999 999999999999999999999999999885 7889999999 88765 68999999999999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE-Ec
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll-Tg 1368 (1472)
|++..+.+.+|.... ...+|++++|+..|+|+ +|
T Consensus 257 DlRaD~~~a~ys~~~---------------------------------------------~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 257 DLRADQELAVYSHDS---------------------------------------------IICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred eecCCcEEeeeccCc---------------------------------------------ccCCceeEEEcccccEEEee
Confidence 999988888876211 12379999999999555 88
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeE
Q 000470 1369 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1448 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1448 (1472)
..|..+.+||.-.++...++.| |.+.|++
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~G---------------------------------------------------HeNRvSc 320 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLAG---------------------------------------------------HENRVSC 320 (343)
T ss_pred ecCCceeEeeccccceEEEeec---------------------------------------------------cCCeeEE
Confidence 8999999999887776655544 9999999
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000470 1449 LGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1449 va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+. .+++|-.|+|||+|-.+|||-
T Consensus 321 l~-~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 321 LG-VSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EE-ECCCCcEEEecchhHheeecC
Confidence 96 899999999999999999994
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=305.96 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=167.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
||||||+.+|++|+....+.|||||.. |.|||||+.++.|++.|++.+++||..|+.|||+++++|||||.||||++.+
T Consensus 110 LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N 189 (668)
T KOG0611|consen 110 LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN 189 (668)
T ss_pred cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC
Confidence 799999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+++||+|||++..+. ...++.|.||++.|.+||++.+.. .-++.+|.||||++||.|+.|..|
T Consensus 190 ~NiKIADFGLSNly~--------~~kfLqTFCGSPLYASPEIvNG~P---------Y~GPEVDsWsLGvLLYtLVyGtMP 252 (668)
T KOG0611|consen 190 NNIKIADFGLSNLYA--------DKKFLQTFCGSPLYASPEIVNGTP---------YKGPEVDSWSLGVLLYTLVYGTMP 252 (668)
T ss_pred CCeeeeccchhhhhc--------cccHHHHhcCCcccCCccccCCCC---------CCCCccchhhHHHHHHHHhhcccc
Confidence 999999999976542 123578999999999999875332 236889999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++.+...+.+........-+.-+ ..+.-||+.||..||++|.|++++..|||
T Consensus 253 FDG~Dhk~lvrQIs~GaYrEP~~P-SdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 253 FDGRDHKRLVRQISRGAYREPETP-SDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred cCCchHHHHHHHhhcccccCCCCC-chHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 998776554433322211122223 36899999999999999999999999987
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=296.98 Aligned_cols=191 Identities=20% Similarity=0.201 Sum_probs=167.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||++++++..+.+.+.+||||||++ |.|+.++++.+++++..+++++.||+.||+|||+++|++|||||||||+|+.
T Consensus 101 v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~ 180 (355)
T KOG0616|consen 101 VSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN 180 (355)
T ss_pred ccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccC
Confidence 369999999999999999999999999 6999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+|.... ..-|.||||.|+|||++. ..+|+.++|.||||+++|||+.|.||
T Consensus 181 G~iKitDFGFAK~v~~----------rT~TlCGTPeYLAPEii~----------sk~ynkavDWWalGVLIYEMlaG~pP 240 (355)
T KOG0616|consen 181 GHIKITDFGFAKRVSG----------RTWTLCGTPEYLAPEIIQ----------SKGYNKAVDWWALGVLIYEMLAGYPP 240 (355)
T ss_pred CcEEEEeccceEEecC----------cEEEecCCccccChHHhh----------cCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 9999999999997621 135789999999999875 45789999999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|-..+..++..........+|...+.++++||.++|+.|-.+|. ...++..|
T Consensus 241 F~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 241 FYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred CcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence 97766555555455555557778889999999999999999994 34566666
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-33 Score=288.83 Aligned_cols=193 Identities=23% Similarity=0.315 Sum_probs=166.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+++++.+.++...|||+|+|.| +|..-|-.+-.+++..+-.++.||++||.|||.+||||||+||+|+|+.+.
T Consensus 67 LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK 146 (355)
T KOG0033|consen 67 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK 146 (355)
T ss_pred cCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence 6899999999999999999999999995 898888777778999999999999999999999999999999999999765
Q ss_pred C---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 80 N---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 80 ~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
. -+||+|||+++... +. .......|+|.|||||++. ..+|+..+|||+.|+|||-|+.|
T Consensus 147 ~~~A~vKL~~FGvAi~l~---~g-----~~~~G~~GtP~fmaPEvvr----------kdpy~kpvDiW~cGViLfiLL~G 208 (355)
T KOG0033|consen 147 AKGAAVKLADFGLAIEVN---DG-----EAWHGFAGTPGYLSPEVLK----------KDPYSKPVDIWACGVILYILLVG 208 (355)
T ss_pred cCCCceeecccceEEEeC---Cc-----cccccccCCCcccCHHHhh----------cCCCCCcchhhhhhHHHHHHHhC
Confidence 3 49999999998764 11 1224566899999999765 55899999999999999999999
Q ss_pred CCCCCc-hH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFEL-SH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~-~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.. ++ ++.++++.|+.....+...++++++||++||..||.+|+|+.|+|+|
T Consensus 209 ~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 209 YPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 988866 33 34566788886664555667889999999999999999999999998
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=313.29 Aligned_cols=196 Identities=25% Similarity=0.369 Sum_probs=161.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+++.++..+. ..+|||+|||+.||.-++... -.+++.+++.+++||+.||+|||.+||+|||||..||||+
T Consensus 173 l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid 252 (560)
T KOG0600|consen 173 LDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID 252 (560)
T ss_pred cCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc
Confidence 6899999999998776 699999999999999999874 4699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.+|.+||+|||+|+.+......+ +...+-|++|+|||++++ ...|+.++|+||+|||++||++|+
T Consensus 253 n~G~LKiaDFGLAr~y~~~~~~~------~T~rVvTLWYRpPELLLG---------~t~Yg~aVDlWS~GCIl~El~~gk 317 (560)
T KOG0600|consen 253 NNGVLKIADFGLARFYTPSGSAP------YTSRVVTLWYRPPELLLG---------ATSYGTAVDLWSVGCILAELFLGK 317 (560)
T ss_pred CCCCEEeccccceeeccCCCCcc------cccceEEeeccChHHhcC---------CcccccceeehhhhHHHHHHHcCC
Confidence 99999999999998664332221 355667999999999874 347899999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCc------cc-------------------CCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQ------HL-------------------EKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~------~l-------------------~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|.|.+.. +..+.+..-.|.. .+ ....+....+|+..||..||++|.||.++
T Consensus 318 PI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a 397 (560)
T KOG0600|consen 318 PILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA 397 (560)
T ss_pred CCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH
Confidence 9997543 3332211111000 01 12335678899999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
|++
T Consensus 398 L~s 400 (560)
T KOG0600|consen 398 LQS 400 (560)
T ss_pred hcC
Confidence 998
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-33 Score=309.01 Aligned_cols=197 Identities=20% Similarity=0.260 Sum_probs=162.5
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|+||+.+.+++.. -+.+|+|+|+|+.+|.+.|+.++.|++..++.+++||++||+|+|+.||+||||||.|+|
T Consensus 78 ~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll 157 (359)
T KOG0660|consen 78 LRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLL 157 (359)
T ss_pred hcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhhee
Confidence 579999999999965 357999999999999999999988999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.+..+||+|||+|+..... ....++.....|.+|.|||++.. ...|+.++||||+|||++||++
T Consensus 158 ~n~~c~lKI~DFGLAR~~~~~-----~~~~~mTeYVaTRWYRAPElll~---------~~~Yt~aiDiWSvGCI~AEmL~ 223 (359)
T KOG0660|consen 158 LNADCDLKICDFGLARYLDKF-----FEDGFMTEYVATRWYRAPELLLN---------SSEYTKAIDIWSVGCILAEMLT 223 (359)
T ss_pred eccCCCEEeccccceeecccc-----CcccchhcceeeeeecCHHHHhc---------cccccchhhhhhhhHHHHHHHc
Confidence 999999999999999976432 11223344556889999998853 4579999999999999999999
Q ss_pred CCCCCCchHHH---------------------------HHHhcC-CCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLL---------------------------AYRRGQ-YDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~---------------------------~~~~~~-~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|+|.|.+.+.. .|.+.. ..+.. .+-+..++.+.+|+.+||..||.+|+|
T Consensus 224 gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit 303 (359)
T KOG0660|consen 224 GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT 303 (359)
T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC
Confidence 99999654311 111111 11111 222355788999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+|+|
T Consensus 304 a~eAL~h 310 (359)
T KOG0660|consen 304 AEEALAH 310 (359)
T ss_pred HHHHhcC
Confidence 9999998
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-33 Score=317.38 Aligned_cols=194 Identities=19% Similarity=0.268 Sum_probs=176.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+.++++||+.+++|+|.||+.|+|+.+|...+.++|+.++.+++|++.||.|||+.+|.|||+||.|||+...|
T Consensus 58 lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~ 137 (808)
T KOG0597|consen 58 LKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG 137 (808)
T ss_pred cCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+|+||||+++.... .........|||.|||||.+. +.+|+..+|+||||||+|||+.|+|||
T Consensus 138 ~~KlcdFg~Ar~m~~-------~t~vltsikGtPlYmAPElv~----------e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 138 TLKLCDFGLARAMST-------NTSVLTSIKGTPLYMAPELVE----------EQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred ceeechhhhhhhccc-------CceeeeeccCcccccCHHHHc----------CCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 999999999986532 344556778999999999764 568999999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-...+..+.+........++...+..+++|+..+|.+||.+|.+..+++.|
T Consensus 201 ~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 201 YARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred hHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 888877776665554455566777899999999999999999999999998
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=305.62 Aligned_cols=200 Identities=21% Similarity=0.206 Sum_probs=164.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||++++..|..++.+|+||+||. |++.+.++.. ..++|..+..|++++++||.|||.+|.||||||+.|||++
T Consensus 81 ~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~ 160 (516)
T KOG0582|consen 81 IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID 160 (516)
T ss_pred cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc
Confidence 689999999999999999999999999 8999999862 3499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
++|.|||+|||.+.-..... ....+.|.+..|++||||||++. .+...|+.|+||||||++..||.+|.
T Consensus 161 ~dG~VkLadFgvsa~l~~~G---~R~~~rf~tfvgtp~wmAPEvl~--------q~~~GYdfKaDIwSfGITA~ELA~G~ 229 (516)
T KOG0582|consen 161 SDGTVKLADFGVSASLFDSG---DRQVTRFNTFVGTPCWMAPEVLM--------QQLHGYDFKADIWSFGITACELAHGH 229 (516)
T ss_pred CCCcEEEcCceeeeeecccC---ceeeEeeccccCcccccChHHhh--------hcccCccchhhhhhhhHHHHHHhcCC
Confidence 99999999999765554322 22233348889999999999975 33457999999999999999999999
Q ss_pred CCCCchH-HHHHHhcCCC--C-------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQYD--P-------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~~~--~-------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||..-. +..+...... + ...-.+..+..++++|..||++||++||||+++|+|
T Consensus 230 aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 230 APFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 9996332 2222211111 1 111223446689999999999999999999999998
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-32 Score=288.40 Aligned_cols=195 Identities=24% Similarity=0.300 Sum_probs=161.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+.+.++|-....+-||+||++.+|+..|+.+ -.|+..++++++.|+++||+|||++.|+||||||.|+|++++
T Consensus 58 l~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~ 137 (318)
T KOG0659|consen 58 LKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD 137 (318)
T ss_pred ccCcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC
Confidence 6899999999999999999999999999999999875 459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....+.... ....-|.+|+|||.+.+. ..|+..+||||.|||++||+.|.|+
T Consensus 138 g~lKiADFGLAr~f~~p~~~~-------~~~V~TRWYRAPELLfGs---------r~Yg~~VDmWavGCI~AELllr~P~ 201 (318)
T KOG0659|consen 138 GQLKIADFGLARFFGSPNRIQ-------THQVVTRWYRAPELLFGS---------RQYGTGVDMWAVGCIFAELLLRVPF 201 (318)
T ss_pred CcEEeecccchhccCCCCccc-------ccceeeeeccChHHhccc---------hhcCCcchhhhHHHHHHHHHccCCC
Confidence 999999999999875443321 222568899999998743 4789999999999999999999999
Q ss_pred CCch----HHHHH---------------------HhcCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS----HLLAY---------------------RRGQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~----~~~~~---------------------~~~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+. ++..+ .+..+.|.+ .+-...+.++.||+.+||.+||.+|+++.|+|+|
T Consensus 202 fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 202 FPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 9643 22222 111111111 1222335678999999999999999999999998
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=310.17 Aligned_cols=198 Identities=21% Similarity=0.199 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCC--eEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDK--AAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++|||||++++...... .++++|||+. |+|.+++...+ .|++..++.+..||++||.|||++||+||||||+|||+
T Consensus 71 l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl 150 (313)
T KOG0198|consen 71 LNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL 150 (313)
T ss_pred CCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE
Confidence 57999999999855544 6999999999 79999999866 79999999999999999999999999999999999999
Q ss_pred cc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 TS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+. ++.+||+|||+++..... ...........||+.|||||++.. +....+++||||+||++.||+|
T Consensus 151 ~~~~~~~KlaDFG~a~~~~~~----~~~~~~~~~~~Gtp~~maPEvi~~---------g~~~~~~sDiWSlGCtVvEM~T 217 (313)
T KOG0198|consen 151 DPSNGDVKLADFGLAKKLESK----GTKSDSELSVQGTPNYMAPEVIRN---------GEVARRESDIWSLGCTVVEMLT 217 (313)
T ss_pred eCCCCeEEeccCccccccccc----cccccccccccCCccccCchhhcC---------CCcCCccchhhhcCCEEEeccC
Confidence 99 699999999998765420 011111234568999999998753 1122368999999999999999
Q ss_pred CCCCCCch--HHH-HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELS--HLL-AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~--~~~-~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||..- ... .++.+.....+.++...++++++||.+|+.+||++||||+++|+|
T Consensus 218 g~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 218 GKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 99999751 111 122222223346777788999999999999999999999999998
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=297.15 Aligned_cols=258 Identities=18% Similarity=0.204 Sum_probs=226.2
Q ss_pred CCCCCcc-cccceeeeccccccceeEEEEcCC--CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEe
Q 000470 1039 IPDSGWR-PRGILVAHLQEHCSAVNEIAISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMML 1115 (1472)
Q Consensus 1039 ~~~~~W~-p~G~lV~~l~~H~~~V~~lafspd--~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~ 1115 (1472)
.....|. |.+.++..|.||.+.|.++.|+|. +.-+||||.||+||+|++..-. ....+.+|..+|..++|+
T Consensus 197 G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~------~l~~l~gH~~RVs~VafH 270 (459)
T KOG0272|consen 197 GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET------PLQDLEGHLARVSRVAFH 270 (459)
T ss_pred CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc------chhhhhcchhhheeeeec
Confidence 3457898 789999999999999999999996 5689999999999999998643 567788999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCC
Q 000470 1116 RHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTR 1195 (1472)
Q Consensus 1116 ~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlr 1195 (1472)
|+|+.|++++.|.+-++||+.+.. ...+..+|...|..++|+++ |.++++|+.|..-++||+|
T Consensus 271 PsG~~L~TasfD~tWRlWD~~tk~--------------ElL~QEGHs~~v~~iaf~~D---GSL~~tGGlD~~~RvWDlR 333 (459)
T KOG0272|consen 271 PSGKFLGTASFDSTWRLWDLETKS--------------ELLLQEGHSKGVFSIAFQPD---GSLAATGGLDSLGRVWDLR 333 (459)
T ss_pred CCCceeeecccccchhhcccccch--------------hhHhhcccccccceeEecCC---CceeeccCccchhheeecc
Confidence 999999999999999999998521 12234467778999999999 7799999999999999999
Q ss_pred CCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCC
Q 000470 1196 SNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1196 t~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+++++-.|.+ |.+.|.++.|+|+|..|+||++|+++++||||-..++..+.. |..-|..++| .|.. |.
T Consensus 334 tgr~im~L~g--H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-H~nlVS~Vk~-~p~~--------g~ 401 (459)
T KOG0272|consen 334 TGRCIMFLAG--HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-HSNLVSQVKY-SPQE--------GY 401 (459)
T ss_pred cCcEEEEecc--cccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc-ccchhhheEe-cccC--------Ce
Confidence 9999988877 999999999999999999999999999999998888776654 6778899998 7732 56
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++++.|+++++|...+++|.+.+. +|...|.
T Consensus 402 fL~TasyD~t~kiWs~~~~~~~ksLa-----------------------------------------------GHe~kV~ 434 (459)
T KOG0272|consen 402 FLVTASYDNTVKIWSTRTWSPLKSLA-----------------------------------------------GHEGKVI 434 (459)
T ss_pred EEEEcccCcceeeecCCCcccchhhc-----------------------------------------------CCccceE
Confidence 89999999999999999998877765 3444799
Q ss_pred EeccCCCC-cEEEccCCCeEEEEe
Q 000470 1356 SLLPLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1356 sl~~~p~g-~llTgg~Dg~IrlWD 1378 (1472)
++..++++ .++|++.|++|++|.
T Consensus 435 s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 435 SLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEeccCCceEEEeccCceeeecc
Confidence 99999999 788999999999995
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=310.54 Aligned_cols=199 Identities=22% Similarity=0.257 Sum_probs=162.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.+|.||++|..|++...+||||||++ |++..+|.+.+.|++.++++++.+++.|++.+|+.|+|||||||+|+||+..|
T Consensus 199 ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 199 DSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred CCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC
Confidence 47999999999999999999999999 69999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCC-----------------CCCCCCCce-----------------------eeccCCCCccccCcc
Q 000470 81 WLYLSDFASFKPTYIP-----------------YDDPSDFSF-----------------------FFDTGGKRLCYLAPE 120 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~-----------------~~~~~~~~~-----------------------~~~~~~gt~~Y~APE 120 (1472)
++||+|||+++..... +..+.++.. +.....|||.|||||
T Consensus 279 HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPE 358 (550)
T KOG0605|consen 279 HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPE 358 (550)
T ss_pred CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchH
Confidence 9999999998654321 111222221 112346899999999
Q ss_pred cccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCCCC----cccCCCCCHHHHHHHHHhcc
Q 000470 121 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS----QHLEKIPDSGIRKMILHMIQ 196 (1472)
Q Consensus 121 ~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~----~~l~~~~~~~l~~LI~~mL~ 196 (1472)
+|. +..|+..+|+||||||+|||+.|.|||..+...+..+...... ..-....+++++|||.+||.
T Consensus 359 Vll----------~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~ 428 (550)
T KOG0605|consen 359 VLL----------GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC 428 (550)
T ss_pred HHh----------cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc
Confidence 987 3468899999999999999999999998776554333222211 11122345789999999999
Q ss_pred cCcCCCC---CHHHHHHH
Q 000470 197 LEPELRF---SAESYLQN 211 (1472)
Q Consensus 197 ~dP~~Rp---sa~elL~~ 211 (1472)
||++|. +++||-+|
T Consensus 429 -d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 429 -DPENRLGSKGAEEIKKH 445 (550)
T ss_pred -CHHHhcCcccHHHHhcC
Confidence 999999 48999988
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=303.14 Aligned_cols=193 Identities=22% Similarity=0.230 Sum_probs=164.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-cc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv-~~ 78 (1472)
.|||||++|+++.+...+|||+|+-+ |+|+|||.+. ..+.+..+++++.||+.|+.|||+..+||||||||||.+ ..
T Consensus 75 QHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 75 QHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred cCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence 69999999999999999999999999 6999999764 459999999999999999999999999999999999876 45
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
-|-|||+|||++..+. | ...+.+.||++.|-|||++.+..++ .+++||||||+|||.|++|++
T Consensus 155 lGlVKLTDFGFSNkf~-P-------G~kL~TsCGSLAYSAPEILLGDsYD---------APAVDiWSLGVILyMLVCGq~ 217 (864)
T KOG4717|consen 155 LGLVKLTDFGFSNKFQ-P-------GKKLTTSCGSLAYSAPEILLGDSYD---------APAVDIWSLGVILYMLVCGQP 217 (864)
T ss_pred cCceEeeeccccccCC-C-------cchhhcccchhhccCchhhhcCccC---------CcchhhhHHHHHHHHHHhCCC
Confidence 6999999999876542 2 2235789999999999999865544 578999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||+..+--+......+.....|...+.++++||..||++||++|.+.+|+..+
T Consensus 218 PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 218 PFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 99754433332333333444667778899999999999999999999999987
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=312.78 Aligned_cols=193 Identities=20% Similarity=0.218 Sum_probs=165.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.|+|||.|++.|..+..+|+||||++ |+|-|.+.... ++|.++..|+++++.||+|||.+||+|||||.+|||++.+
T Consensus 327 ~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~ 405 (550)
T KOG0578|consen 327 LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD 405 (550)
T ss_pred ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC
Confidence 479999999999999999999999999 69999887654 9999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||++..+..... --.+..||++|||||+.. ...|++++||||||+++.||+-|+||
T Consensus 406 g~vKltDFGFcaqi~~~~~-------KR~TmVGTPYWMAPEVvt----------rk~YG~KVDIWSLGIMaIEMveGEPP 468 (550)
T KOG0578|consen 406 GSVKLTDFGFCAQISEEQS-------KRSTMVGTPYWMAPEVVT----------RKPYGPKVDIWSLGIMAIEMVEGEPP 468 (550)
T ss_pred CcEEEeeeeeeeccccccC-------ccccccCCCCccchhhhh----------hcccCccccchhhhhHHHHHhcCCCC
Confidence 9999999999876643322 225678999999999764 55899999999999999999999888
Q ss_pred CC-chHHHHHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHLLAYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~~~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|- ...+..+.... ..+....+...++.+++|+.+||+.||++|++|.|+|+|
T Consensus 469 YlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 469 YLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 75 44454444332 334444566778999999999999999999999999998
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=287.88 Aligned_cols=192 Identities=24% Similarity=0.234 Sum_probs=164.1
Q ss_pred CCCCcceeeEEEEe----CCeEEEEecccC-CcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 2 SSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~----~~~~~lV~Ey~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
+|||||.++++|+. .+.+.+|||.|+ |.|+.+|..++. ++|.++..|+.||..|+.|||+.+|.||||||||+
T Consensus 113 ~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENL 192 (400)
T KOG0604|consen 113 GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENL 192 (400)
T ss_pred CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhe
Confidence 69999999999975 357889999999 699999998765 99999999999999999999999999999999999
Q ss_pred EEccCC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 75 LVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 75 Lv~~~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
|.+..+ .+||+|||++|.... ...+.+.|-|+.|.|||++- ..+|+..+|+||+|+++|
T Consensus 193 Lyt~t~~na~lKLtDfGFAK~t~~--------~~~L~TPc~TPyYvaPevlg----------~eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 193 LYTTTSPNAPLKLTDFGFAKETQE--------PGDLMTPCFTPYYVAPEVLG----------PEKYDKSCDMWSLGVIMY 254 (400)
T ss_pred eeecCCCCcceEecccccccccCC--------CccccCCcccccccCHHHhC----------chhcCCCCCccchhHHHH
Confidence 997653 699999999997632 22356788899999999764 346899999999999999
Q ss_pred HHHhCCCCCCchH--------HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 152 ELFLEVPFFELSH--------LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~--------~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-|++|.|||-... ...++.+.|.....-+.-.++..+++|+++|..+|.+|.|++|+++|
T Consensus 255 IlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 255 ILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 9999999994321 23466777875554445567899999999999999999999999998
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=288.99 Aligned_cols=195 Identities=23% Similarity=0.304 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.|||||.+.++.... +.+|||||||+.+|...+.+-+ .+...+++.++.|+++||+|||.+.|+||||||+|+|++
T Consensus 132 ~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~ 211 (419)
T KOG0663|consen 132 ARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS 211 (419)
T ss_pred cCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec
Confidence 5799999999998754 4799999999999999998744 699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..|.+||+|||+|+.+..|... +....-|.+|+|||.+.+. ..|+.++|+||+|||++||++++
T Consensus 212 ~~G~lKiaDFGLAR~ygsp~k~-------~T~lVVTLWYRaPELLLG~---------~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 212 HKGILKIADFGLAREYGSPLKP-------YTPLVVTLWYRAPELLLGA---------KTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred cCCcEEecccchhhhhcCCccc-------CcceEEEeeecCHHHhcCC---------cccCcchhhhhHHHHHHHHHhcC
Confidence 9999999999999988665332 2344568999999998743 46899999999999999999999
Q ss_pred CCCCch----HHHHHHhcCCCC-----------------------C----cccCCC-CCHHHHHHHHHhcccCcCCCCCH
Q 000470 158 PFFELS----HLLAYRRGQYDP-----------------------S----QHLEKI-PDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 158 ~pf~~~----~~~~~~~~~~~~-----------------------~----~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
|.|.+. ++.++.+..-.| . ..+... .++...+|+..+|.+||.+|.||
T Consensus 276 Plf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA 355 (419)
T KOG0663|consen 276 PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA 355 (419)
T ss_pred CCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH
Confidence 999653 332221110000 0 001111 34677899999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|+|+|
T Consensus 356 ~~~L~h 361 (419)
T KOG0663|consen 356 EDGLKH 361 (419)
T ss_pred HHhhcc
Confidence 999999
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-32 Score=300.27 Aligned_cols=194 Identities=26% Similarity=0.385 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeC--C---eEEEEecccCCcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--K---AAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~---~~~lV~Ey~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+.|||||++..+|... . ...+|||||+.+|+++++. +..++..+++.+.+||++||.|||+.|||||||||
T Consensus 74 l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKP 153 (364)
T KOG0658|consen 74 LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKP 153 (364)
T ss_pred cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCCh
Confidence 5899999998888543 2 4567999999999999984 56799999999999999999999999999999999
Q ss_pred CCEEEccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 72 ENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 72 eNILv~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
+|+|++.+ |.+||||||+||.....+.+ .++. .++.|+|||.+.+. ..|+.+.||||+|||+
T Consensus 154 qNlLvD~~tg~LKicDFGSAK~L~~~epn---iSYi-----cSRyYRaPELifga---------~~Yt~~IDiWSaGCV~ 216 (364)
T KOG0658|consen 154 QNLLVDPDTGVLKICDFGSAKVLVKGEPN---ISYI-----CSRYYRAPELIFGA---------TEYTTSIDIWSAGCVM 216 (364)
T ss_pred heEEEcCCCCeEEeccCCcceeeccCCCc---eeEE-----EeccccCHHHHcCc---------cccCceeEEhhhhHHH
Confidence 99999977 89999999999987544433 2322 26779999998743 4789999999999999
Q ss_pred HHHHhCCCCCCchH----HHHHHh--------------cCC-----C---CC---cccCCCCCHHHHHHHHHhcccCcCC
Q 000470 151 AELFLEVPFFELSH----LLAYRR--------------GQY-----D---PS---QHLEKIPDSGIRKMILHMIQLEPEL 201 (1472)
Q Consensus 151 ~eLltg~~pf~~~~----~~~~~~--------------~~~-----~---~~---~~l~~~~~~~l~~LI~~mL~~dP~~ 201 (1472)
+||+.|+|.|.+.. +..+.+ ..+ . .. ..+....++++.+|+.++|+++|.+
T Consensus 217 aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~ 296 (364)
T KOG0658|consen 217 AELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSK 296 (364)
T ss_pred HHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhh
Confidence 99999999997542 222211 110 0 00 0133455788999999999999999
Q ss_pred CCCHHHHHHH
Q 000470 202 RFSAESYLQN 211 (1472)
Q Consensus 202 Rpsa~elL~~ 211 (1472)
|.++.|++.|
T Consensus 297 R~~~~~~l~h 306 (364)
T KOG0658|consen 297 RLSALEALAH 306 (364)
T ss_pred cCCHHHHhcc
Confidence 9999999988
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=277.16 Aligned_cols=307 Identities=19% Similarity=0.259 Sum_probs=261.4
Q ss_pred CCCcccccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCE
Q 000470 1041 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1041 ~~~W~p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
+..|-|+-.++..+.+|+.+|+++-|+|+-..+|+||+|+++++||..+++. .....+|...+.++.|...|..
T Consensus 91 ~~~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~------e~~LrGHt~sv~di~~~a~Gk~ 164 (406)
T KOG0295|consen 91 PALWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL------ERSLRGHTDSVFDISFDASGKY 164 (406)
T ss_pred hhhcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhh------hhhhhccccceeEEEEecCccE
Confidence 5679998889999999999999999999999999999999999999998873 4456688888999999999999
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
+|+|+.|-.+++||.+.. -.+++....+...|.++.|-|. |.++++++.|.+|+.||+.++-++
T Consensus 165 l~tcSsDl~~~LWd~~~~-------------~~c~ks~~gh~h~vS~V~f~P~---gd~ilS~srD~tik~We~~tg~cv 228 (406)
T KOG0295|consen 165 LATCSSDLSAKLWDFDTF-------------FRCIKSLIGHEHGVSSVFFLPL---GDHILSCSRDNTIKAWECDTGYCV 228 (406)
T ss_pred EEecCCccchhheeHHHH-------------HHHHHHhcCcccceeeEEEEec---CCeeeecccccceeEEecccceeE
Confidence 999999999999999831 1223344567778899999998 679999999999999999999999
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccc------cCCC
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVS------TTAR 1274 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~------~~~~ 1274 (1472)
.++.. |...|..+....||..+++|+.|.+|++|-+.++.+...++. |.-+|.++.| .|....... ...+
T Consensus 229 ~t~~~--h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~-hEh~vEci~w-ap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 229 KTFPG--HSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE-HEHPVECIAW-APESSYPSISEATGSTNGG 304 (406)
T ss_pred EeccC--chHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc-cccceEEEEe-cccccCcchhhccCCCCCc
Confidence 99987 778999999999999999999999999999999977666654 5668999988 665432111 1234
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
..+.+++-|+.|++||+.+|.|+.++.. |..+|
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~g-----------------------------------------------hdnwV 337 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVG-----------------------------------------------HDNWV 337 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEec-----------------------------------------------cccee
Confidence 5888999999999999999999988863 44489
Q ss_pred eEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhh
Q 000470 1355 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1433 (1472)
Q Consensus 1355 ~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1433 (1472)
+.++|+|+| +|+++.+|+++|+||+++..+..++.
T Consensus 338 r~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~-------------------------------------------- 373 (406)
T KOG0295|consen 338 RGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE-------------------------------------------- 373 (406)
T ss_pred eeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--------------------------------------------
Confidence 999999999 77899999999999999876644332
Q ss_pred hhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1434 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1434 ~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|...|++++ |+.+..|++||+-|..+|||.
T Consensus 374 -------ah~hfvt~lD-fh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 374 -------AHEHFVTSLD-FHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -------CCcceeEEEe-cCCCCceEEeccccceeeeee
Confidence 2888899994 999999999999999999994
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=274.25 Aligned_cols=305 Identities=20% Similarity=0.295 Sum_probs=246.4
Q ss_pred CCCCcccccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1040 PDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1040 ~~~~W~p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
+.+-|...=++-+.+.+|-+.|.+++|.|.+++|+|||.|++++|||+.++. -.++..+|...|..+++++-..
T Consensus 133 ~rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~------LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 133 PRPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ------LKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred CCccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe------EEEeecchhheeeeeeecccCc
Confidence 3456777677889999999999999999999999999999999999999876 6678889999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
++++|+.|+.|+-||++..+ -+|.| ..|=..|.+++.+|. -..|++|+.|.++++||+|+...
T Consensus 207 YlFs~gedk~VKCwDLe~nk-------------vIR~Y-hGHlS~V~~L~lhPT---ldvl~t~grDst~RvWDiRtr~~ 269 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEYNK-------------VIRHY-HGHLSGVYCLDLHPT---LDVLVTGGRDSTIRVWDIRTRAS 269 (460)
T ss_pred eEEEecCCCeeEEEechhhh-------------hHHHh-ccccceeEEEecccc---ceeEEecCCcceEEEeeecccce
Confidence 99999999999999998411 22222 234457888999987 56999999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
+.++.+ |..+|.++.+.|-...+++|+.|++|++||+|.++-.....+ |...+.+++. +|... .++
T Consensus 270 V~~l~G--H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~-hkksvral~l-hP~e~----------~fA 335 (460)
T KOG0285|consen 270 VHVLSG--HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH-HKKSVRALCL-HPKEN----------LFA 335 (460)
T ss_pred EEEecC--CCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec-ccceeeEEec-CCchh----------hhh
Confidence 999987 999999999999888999999999999999999998888776 5667889988 88764 344
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
.++.+.|.-|++..|...+-+. +|..-|+++..
T Consensus 336 Sas~dnik~w~~p~g~f~~nls-----------------------------------------------gh~~iintl~~ 368 (460)
T KOG0285|consen 336 SASPDNIKQWKLPEGEFLQNLS-----------------------------------------------GHNAIINTLSV 368 (460)
T ss_pred ccCCccceeccCCccchhhccc-----------------------------------------------cccceeeeeee
Confidence 4445569999998876544332 34446889999
Q ss_pred CCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCC
Q 000470 1360 LPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA 1439 (1472)
Q Consensus 1360 ~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1439 (1472)
..+|.+++||+.|.+.+||.+++-+-+-..... +...+
T Consensus 369 nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~v------------------------------------------qpGSl 406 (460)
T KOG0285|consen 369 NSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIV------------------------------------------QPGSL 406 (460)
T ss_pred ccCceEEEcCCceEEEEEecCcCcccccccccc------------------------------------------cCCcc
Confidence 899999999999999999998764322111000 00000
Q ss_pred CCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1440 GCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1440 ~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
. -...|++. +|...|..|+||..|.+|++||
T Consensus 407 ~-sEagI~as-~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 407 E-SEAGIFAS-CFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred c-cccceeEE-eecccCceEEeccCCcceEEEe
Confidence 0 23457777 4888899999999999999997
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=267.05 Aligned_cols=262 Identities=22% Similarity=0.348 Sum_probs=216.3
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
..|..+..|.||...|+.++.++||+|++|||.||++++||+.+++ +.+.+.+|...|++++|+++.+.+++|+
T Consensus 51 ~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~------~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 51 KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE------STRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred ccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc------EEEEEEecCCceEEEEecCCCceeecCC
Confidence 3588999999999999999999999999999999999999999886 6778999999999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
.|.+|++|++-... ........+...|.++.|+|+. +..+++.+++|++|++||+++.+....+.+
T Consensus 125 rDkTiklwnt~g~c-------------k~t~~~~~~~~WVscvrfsP~~-~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g 190 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC-------------KYTIHEDSHREWVSCVRFSPNE-SNPIIVSASWDKTVKVWNLRNCQLRTTFIG 190 (315)
T ss_pred CcceeeeeeecccE-------------EEEEecCCCcCcEEEEEEcCCC-CCcEEEEccCCceEEEEccCCcchhhcccc
Confidence 99999999986210 1111122236799999999984 246999999999999999999888887766
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|.+.++.++++|||...++|+.||.+.|||++.++.+.++. +...|.+++| +|.. ++++.+.+. .
T Consensus 191 --h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v~sl~f-spnr---------ywL~~at~~-s 255 (315)
T KOG0279|consen 191 --HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIVNSLCF-SPNR---------YWLCAATAT-S 255 (315)
T ss_pred --ccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeEeeEEe-cCCc---------eeEeeccCC-c
Confidence 99999999999999999999999999999999999876655 4568999999 7754 355555544 4
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-c
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ 1364 (1472)
|+|||++++.++..++...... ......+...+++|+++| .
T Consensus 256 IkIwdl~~~~~v~~l~~d~~g~--------------------------------------s~~~~~~~clslaws~dG~t 297 (315)
T KOG0279|consen 256 IKIWDLESKAVVEELKLDGIGP--------------------------------------SSKAGDPICLSLAWSADGQT 297 (315)
T ss_pred eEEEeccchhhhhhcccccccc--------------------------------------ccccCCcEEEEEEEcCCCcE
Confidence 9999999999888776322100 001112245678899999 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000470 1365 LLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~ 1380 (1472)
|++|-.|+.||+|.+.
T Consensus 298 Lf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 298 LFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEeeecCCcEEEEEee
Confidence 8899999999999864
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=291.20 Aligned_cols=195 Identities=27% Similarity=0.378 Sum_probs=160.1
Q ss_pred CCCCC-cceeeEEEEeCC------eEEEEecccCCcHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTP-CVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPP----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpN-Iv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~----~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
|+|+| |+.+++++.+++ .+|+|+||++.+|.+++...+ .++...++.+++||+.||+|||++||+||||
T Consensus 67 L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDL 146 (323)
T KOG0594|consen 67 LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDL 146 (323)
T ss_pred hCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence 68999 999999999887 899999999999999998755 4888899999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+|||+++.|.+||+|||+++....|... +....+|.+|.|||++.+. ..|+..+||||+|||
T Consensus 147 KPQNlLi~~~G~lKlaDFGlAra~~ip~~~-------yt~evvTlWYRaPEvLlGs---------~~Ys~~vDiWs~GcI 210 (323)
T KOG0594|consen 147 KPQNLLISSSGVLKLADFGLARAFSIPMRT-------YTPEVVTLWYRAPEVLLGS---------TSYSTSVDIWSLGCI 210 (323)
T ss_pred CcceEEECCCCcEeeeccchHHHhcCCccc-------ccccEEEeeccCHHHhcCC---------CcCCCCcchHhHHHH
Confidence 999999999999999999999977655432 3556679999999998743 358999999999999
Q ss_pred HHHHHhCCCCCCchH----HHHHHhcC----------------CCC-------Cccc---CCCCCHHHHHHHHHhcccCc
Q 000470 150 IAELFLEVPFFELSH----LLAYRRGQ----------------YDP-------SQHL---EKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 150 l~eLltg~~pf~~~~----~~~~~~~~----------------~~~-------~~~l---~~~~~~~l~~LI~~mL~~dP 199 (1472)
++||+++++.|.+.. +..+.+.. +.. ...+ .+..+++..+++.+||+.+|
T Consensus 211 faEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p 290 (323)
T KOG0594|consen 211 FAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDP 290 (323)
T ss_pred HHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCc
Confidence 999999999996542 22221111 110 0000 01113578999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
.+|.||+.+|+|
T Consensus 291 ~~R~Sa~~al~h 302 (323)
T KOG0594|consen 291 AKRISAKGALTH 302 (323)
T ss_pred ccCcCHHHHhcC
Confidence 999999999998
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=296.26 Aligned_cols=205 Identities=17% Similarity=0.142 Sum_probs=160.7
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|||||+++++..+. ..+|||+|||. |.+...=...+-|++.+++.|+..++.||+|||.+||+||||||.|+|++
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS 244 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc
Confidence 6799999999999874 58999999999 66554333344499999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
++|+|||+|||.+...... ........+....|||.|+|||.+.... .....+.+.||||+|++||.|+.|+
T Consensus 245 ~~g~VKIsDFGVs~~~~~~--~~~~~d~~L~~tvGTPAF~APE~c~~~~------~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQG--SDEGSDDQLSRTVGTPAFFAPELCSGGN------SFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred CCCcEEeeccceeeecccC--CccccHHHHhhcCCCccccchHhhcCCC------CccccchhhhhhhhhhhHHHhhhcc
Confidence 9999999999987655332 1122233344577999999999876321 1234577999999999999999997
Q ss_pred CCCCchHHHHHHhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||..+...+...........++. ...+.+++||.+||++||++|++..++..|.+
T Consensus 317 ~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 317 LPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred CCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 777665555444333332222333 34678999999999999999999999998844
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=302.22 Aligned_cols=197 Identities=18% Similarity=0.177 Sum_probs=164.8
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKG-ICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~g-IvH~DLKpeNIL 75 (1472)
|+|||||+|++++.... ..++||||++ |+|++++.. +..++...+..++.||++||+|||+++ ||||||||+|||
T Consensus 96 l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiL 175 (362)
T KOG0192|consen 96 LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNIL 175 (362)
T ss_pred CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEE
Confidence 68999999999999887 7999999999 799999987 567999999999999999999999999 999999999999
Q ss_pred EccCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 76 VTSWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 76 v~~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++..+ ++||+|||+++...... .......||..|||||++... ...|+.++||||||+++|||+
T Consensus 176 v~~~~~~~KI~DFGlsr~~~~~~-------~~~~~~~GT~~wMAPEv~~~~--------~~~~~~K~DvySFgIvlWEl~ 240 (362)
T KOG0192|consen 176 VDLKGKTLKIADFGLSREKVISK-------TSMTSVAGTYRWMAPEVLRGE--------KSPYTEKSDVYSFGIVLWELL 240 (362)
T ss_pred EcCCCCEEEECCCccceeecccc-------ccccCCCCCccccChhhhcCC--------CCcCCccchhhhHHHHHHHHH
Confidence 99998 99999999997653221 111235789999999988622 347999999999999999999
Q ss_pred hCCCCCCchHHHH--HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 LEVPFFELSHLLA--YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 tg~~pf~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+.||....... +........+.++...++.+..|+.+||..||++||++.+++..+
T Consensus 241 t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 241 TGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred HCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 9998886544222 222223334445665788999999999999999999999999874
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=307.85 Aligned_cols=194 Identities=16% Similarity=0.163 Sum_probs=162.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~ 131 (323)
T cd05571 52 TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD 131 (323)
T ss_pred CCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 132 ~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~P 194 (323)
T cd05571 132 GHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred CCEEEeeCCCCcccccCCC-------cccceecCccccChhhhc----------CCCCCccccCcccchhhhhhhcCCCC
Confidence 9999999999875321111 123446889999999774 34678899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...+..............++...++.+++||.+||+.||++|| ++.++++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 195 FYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 86554433322222222334556678999999999999999999 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=273.50 Aligned_cols=194 Identities=20% Similarity=0.179 Sum_probs=165.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+++|++|.++...||++||.. |+|+..|. ....+++.....+++|++.||.|||.++|+||||||||+|++
T Consensus 79 L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 79 LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG 158 (281)
T ss_pred cCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC
Confidence 689999999999999999999999999 89999998 456699999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..|.+||+|||.+..... .--.+.|||..|++||... +..++..+|+|++|++.||++.|.
T Consensus 159 ~~~~lkiAdfGwsV~~p~---------~kR~tlcgt~dyl~pEmv~----------~~~hd~~Vd~w~lgvl~yeflvg~ 219 (281)
T KOG0580|consen 159 SAGELKIADFGWSVHAPS---------NKRKTLCGTLDYLPPEMVE----------GRGHDKFVDLWSLGVLCYEFLVGL 219 (281)
T ss_pred CCCCeeccCCCceeecCC---------CCceeeecccccCCHhhcC----------CCCccchhhHHHHHHHHHHHHhcC
Confidence 999999999998764311 1125778999999999654 557789999999999999999999
Q ss_pred CCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||......+..+.........+...+..++|||.+||.++|.+|....|+++|++
T Consensus 220 ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 220 PPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred CchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 99976553332222222223345667789999999999999999999999999954
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=295.96 Aligned_cols=204 Identities=22% Similarity=0.294 Sum_probs=166.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+|.+|+++++|-.+++.+||||||-+.+|...|+++.. ++.-.++.+.+|+|.|+.++|.+||||.||||.|+|+-. |
T Consensus 418 g~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G 496 (677)
T KOG0596|consen 418 GHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-G 496 (677)
T ss_pred CCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-e
Confidence 57899999999999999999999999999999998754 344589999999999999999999999999999999976 9
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc-cccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ-VAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+||+|||+|+.+ .+...+.+-++.+||+.||+||.+........ -...-+++.++||||||||||+|+.|++|
T Consensus 497 ~LKLIDFGIA~aI-----~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktP 571 (677)
T KOG0596|consen 497 RLKLIDFGIANAI-----QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTP 571 (677)
T ss_pred eEEeeeechhccc-----CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCc
Confidence 9999999999876 33445667788999999999999975433200 01233578999999999999999999999
Q ss_pred CCchH-HHHHHhcCCCC--CcccCCCCCHH-HHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRGQYDP--SQHLEKIPDSG-IRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~~~~~--~~~l~~~~~~~-l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..-. ...-.....+| ..+++.+.+.. +.+++..||.+||++||++.|+|+|
T Consensus 572 f~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 572 FGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 96432 22222333333 33566666554 9999999999999999999999998
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-30 Score=301.69 Aligned_cols=194 Identities=20% Similarity=0.258 Sum_probs=163.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 50 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~ 129 (312)
T cd05585 50 VNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ 129 (312)
T ss_pred CCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC
Confidence 589999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 130 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~tg~~p 192 (312)
T cd05585 130 GHIALCDFGLCKLNMKDDD-------KTNTFCGTPEYLAPELLL----------GHGYTKAVDWWTLGVLLYEMLTGLPP 192 (312)
T ss_pred CcEEEEECcccccCccCCC-------ccccccCCcccCCHHHHc----------CCCCCCccceechhHHHHHHHhCCCC
Confidence 9999999999874321111 123456889999999875 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 211 (1472)
|.........+........++...++.+++||.+||..||++|| ++.|+++|
T Consensus 193 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 193 FYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 97655444333333333345566778999999999999999997 58999988
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=304.36 Aligned_cols=192 Identities=17% Similarity=0.211 Sum_probs=167.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||.++.++..|++..++|+||||+. |++... .....+++..++.|+..|+.||+|||++|||+||||.+|||+|.+|
T Consensus 427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred cCCeEeecccccccCCeEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC
Confidence 59999999999999999999999999 574443 3445699999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||+|||++|.....++ ...|.|||+.|||||++. +..|+.++|.||||++||||+.|++||
T Consensus 506 h~kiADFGlcKe~m~~g~-------~TsTfCGTpey~aPEil~----------e~~Yt~aVDWW~lGVLlyeML~Gq~PF 568 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQGD-------RTSTFCGTPEFLAPEVLT----------EQSYTRAVDWWGLGVLLYEMLVGESPF 568 (694)
T ss_pred cEEecccccccccCCCCC-------ccccccCChhhcChhhhc----------cCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 999999999986543322 246889999999999875 558999999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
.+++..+.-..........|...+.++.++++++|.+||++|.. ++++.+|
T Consensus 569 ~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 569 PGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred CCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 98877776666666566677788899999999999999999994 5777777
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=299.69 Aligned_cols=191 Identities=20% Similarity=0.201 Sum_probs=161.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||+. |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~ 137 (291)
T cd05612 58 VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKE 137 (291)
T ss_pred CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence 589999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++..... ..+..|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 138 ~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~~l~~g~~p 197 (291)
T cd05612 138 GHIKLTDFGFAKKLRDR----------TWTLCGTPEYLAPEVIQ----------SKGHNKAVDWWALGILIYEMLVGYPP 197 (291)
T ss_pred CCEEEEecCcchhccCC----------cccccCChhhcCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998754211 12345788999999874 33568899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||.+|++ ++|+++|
T Consensus 198 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 198 FFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 876544332222222223345556789999999999999999995 9999998
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-30 Score=301.07 Aligned_cols=194 Identities=24% Similarity=0.279 Sum_probs=169.4
Q ss_pred CCCCCcceeeEEEEeCCe-EEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKA-AYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~-~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
|.|||||.|.+.|+.++. .||||+||+ |+|.+.|... ..+++..+.+++.|++.|++|||+++|+|||||+.||++
T Consensus 60 ~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl 139 (426)
T KOG0589|consen 60 LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL 139 (426)
T ss_pred ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc
Confidence 579999999999999887 999999999 6999999764 458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.|+|.|||++|....+. .+..+..||+.||+||++. +.+|+.|+|||||||++|||++-
T Consensus 140 tk~~~VkLgDfGlaK~l~~~~-------~~a~tvvGTp~YmcPEil~----------d~pYn~KSDiWsLGC~~yEm~~l 202 (426)
T KOG0589|consen 140 TKDKKVKLGDFGLAKILNPED-------SLASTVVGTPYYMCPEILS----------DIPYNEKSDIWSLGCCLYEMCTL 202 (426)
T ss_pred cccCceeecchhhhhhcCCch-------hhhheecCCCcccCHHHhC----------CCCCCccCcchhhcchHHHHHhc
Confidence 999999999999999774322 1235678999999999875 56899999999999999999999
Q ss_pred CCCCCchHHHHHHhcCCCC-CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~~~-~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+++|...+...+....... ...++...+.+++.||..||..+|..||++.++|.+
T Consensus 203 k~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 203 KPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 9999988766554333322 244677778899999999999999999999999987
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-30 Score=294.94 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=174.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+.|.+++...-.+|||||||. |-|+..|+.+..++......|..+|+.|++|||.++|||||||..||||+.+
T Consensus 169 LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~ 248 (904)
T KOG4721|consen 169 LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD 248 (904)
T ss_pred ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc
Confidence 689999999999999999999999999 8999999998889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
..|||+|||-++.... .+ ..-.++||..|||||++. +.+++.|+||||||+|||||+||..|
T Consensus 249 d~VKIsDFGTS~e~~~-------~S-TkMSFaGTVaWMAPEvIr----------nePcsEKVDIwSfGVVLWEmLT~EiP 310 (904)
T KOG4721|consen 249 DVVKISDFGTSKELSD-------KS-TKMSFAGTVAWMAPEVIR----------NEPCSEKVDIWSFGVVLWEMLTGEIP 310 (904)
T ss_pred ceEEeccccchHhhhh-------hh-hhhhhhhhHhhhCHHHhh----------cCCcccccceehhHHHHHHHHhcCCC
Confidence 9999999998875421 11 112456899999999875 56889999999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCCCCChhhhhhh
Q 000470 160 FELSHLLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFY 229 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~l~~~~ 229 (1472)
|..-.-..+.-+.-. .....+.-.++.++-||++||+-.|..||++.++|.|| .+.-|+.|..--..|+
T Consensus 311 YkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl-dIa~pell~~tee~yf 381 (904)
T KOG4721|consen 311 YKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL-DIASPELLSTTEETYF 381 (904)
T ss_pred ccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH-hhcCHHHhcccHHHHH
Confidence 975554444433333 23345667778999999999999999999999999995 4444555543233343
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=300.52 Aligned_cols=193 Identities=18% Similarity=0.203 Sum_probs=162.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~ 133 (320)
T cd05590 54 NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG 133 (320)
T ss_pred CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||++. +..++.++||||+||++|||++|++||
T Consensus 134 ~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf 196 (320)
T cd05590 134 HCKLADFGMCKEGIFNGK-------TTSTFCGTPDYIAPEILQ----------EMLYGPSVDWWAMGVLLYEMLCGHAPF 196 (320)
T ss_pred cEEEeeCCCCeecCcCCC-------cccccccCccccCHHHHc----------CCCCCCccchhhhHHHHHHHhhCCCCC
Confidence 999999999875321111 123456889999999874 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH------HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA------ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa------~elL~~ 211 (1472)
.......+...........+...+..+++||.+||+.||++|+++ +++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 197 EAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 766544433333333333455667899999999999999999998 888877
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-30 Score=303.54 Aligned_cols=191 Identities=19% Similarity=0.184 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 154 (329)
T PTZ00263 75 LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK 154 (329)
T ss_pred CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC
Confidence 589999999999999999999999998 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++..... . .+..|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 155 ~~~kl~Dfg~~~~~~~~-----~-----~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~elltg~~p 214 (329)
T PTZ00263 155 GHVKVTDFGFAKKVPDR-----T-----FTLCGTPEYLAPEVIQ----------SKGHGKAVDWWTMGVLLYEFIAGYPP 214 (329)
T ss_pred CCEEEeeccCceEcCCC-----c-----ceecCChhhcCHHHHc----------CCCCCCcceeechHHHHHHHHcCCCC
Confidence 99999999998754211 1 1345789999999875 33568899999999999999999888
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...+..+++||.+||+.||.+|++ ++++++|
T Consensus 215 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 215 FFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 865443332222222223355567788999999999999999997 7999988
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-30 Score=304.15 Aligned_cols=191 Identities=17% Similarity=0.200 Sum_probs=160.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+. |+|.+++..++.+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 88 l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~ 167 (340)
T PTZ00426 88 INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKD 167 (340)
T ss_pred CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++..... ..+..|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 168 ~~ikL~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~G~~P 227 (340)
T PTZ00426 168 GFIKMTDFGFAKVVDTR----------TYTLCGTPEYIAPEILL----------NVGHGKAADWWTLGIFIYEILVGCPP 227 (340)
T ss_pred CCEEEecCCCCeecCCC----------cceecCChhhcCHHHHh----------CCCCCccccccchhhHHHHHhcCCCC
Confidence 99999999998754210 12346789999999875 33568899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.++++|.+||+.||++|+ +++++++|
T Consensus 228 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 228 FYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 87554333222222222234556678899999999999999996 89999998
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=301.74 Aligned_cols=194 Identities=20% Similarity=0.210 Sum_probs=160.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.+...|+||||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~ 132 (323)
T cd05575 53 VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ 132 (323)
T ss_pred CCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~p 195 (323)
T cd05575 133 GHVVLTDFGLCKEGIEHSK-------TTSTFCGTPEYLAPEVLR----------KQPYDRTVDWWCLGAVLYEMLYGLPP 195 (323)
T ss_pred CcEEEeccCCCcccccCCC-------ccccccCChhhcChhhhc----------CCCCCccccccccchhhhhhhcCCCC
Confidence 9999999999875321111 112345789999999874 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
|..................++...++.+.++|.+||+.||++||++ .++++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 196 FYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 9765444333222222223344457889999999999999999987 577776
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=300.56 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=163.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++.+++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~ 131 (328)
T cd05593 52 TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD 131 (328)
T ss_pred CCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC
Confidence 579999999999999999999999999 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++...... ......+|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 132 ~~~kL~DfG~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~P 194 (328)
T cd05593 132 GHIKITDFGLCKEGITDA-------ATMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (328)
T ss_pred CcEEEecCcCCccCCCcc-------cccccccCCcCccChhhhc----------CCCCCccCCccccchHHHHHhhCCCC
Confidence 999999999987532111 1123456889999999874 33578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++++++||.+||+.||++|+ ++.|+++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 195 FYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 97655444433333333345566778999999999999999997 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=298.74 Aligned_cols=194 Identities=18% Similarity=0.233 Sum_probs=162.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||+. |+|.+++...+.+.+.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 57 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 136 (323)
T cd05584 57 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ 136 (323)
T ss_pred CCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 589999999999999999999999999 5999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|++|
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~ell~G~~p 199 (323)
T cd05584 137 GHVKLTDFGLCKESIHEGT-------VTHTFCGTIEYMAPEILM----------RSGHGKAVDWWSLGALMYDMLTGAPP 199 (323)
T ss_pred CCEEEeeCcCCeecccCCC-------cccccCCCccccChhhcc----------CCCCCCcceecccHHHHHHHhcCCCC
Confidence 9999999999874321111 112346789999999875 23567899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.+++||.+||++||++|| +++++++|
T Consensus 200 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 200 FTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 97655443332222223345566678999999999999999999 89999998
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=299.29 Aligned_cols=194 Identities=16% Similarity=0.177 Sum_probs=161.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 52 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 131 (323)
T cd05595 52 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 131 (323)
T ss_pred CCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC
Confidence 579999999999999999999999999 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 132 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~g~~P 194 (323)
T cd05595 132 GHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred CCEEecccHHhccccCCCC-------ccccccCCcCcCCccccc----------CCCCCchhchhhhHHHHHHHHhCCCC
Confidence 9999999998774321111 123346789999999874 34678899999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||++|+ ++.++++|
T Consensus 195 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 195 FYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 86554333322222222234556678999999999999999998 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=297.58 Aligned_cols=193 Identities=15% Similarity=0.184 Sum_probs=160.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++++..|+||||+. |+|.+++..+..+++.++..++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~ 133 (316)
T cd05620 54 ENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG 133 (316)
T ss_pred CCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 79999999999999999999999999 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~Pf 196 (316)
T cd05620 134 HIKIADFGMCKENVFGDN-------RASTFCGTPDYIAPEILQ----------GLKYTFSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred CEEeCccCCCeecccCCC-------ceeccCCCcCccCHHHHc----------CCCCCcccchhhhHHHHHHHHhCCCCC
Confidence 999999998764321111 123456789999999875 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~ 211 (1472)
..................++...+.++++||.+||+.||++|+++ +++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 197 HGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 755443333222222334555677899999999999999999997 577777
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=292.81 Aligned_cols=195 Identities=23% Similarity=0.347 Sum_probs=156.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.+++..|+||||++|+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 60 l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~ 139 (288)
T cd07871 60 LKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK 139 (288)
T ss_pred CCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 5899999999999999999999999999999998764 357999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+.. ......+++.|+|||.+.+ ...++.++||||+||++|||++|++|
T Consensus 140 ~~~kl~DfG~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~p 203 (288)
T cd07871 140 GELKLADFGLARAKSVPTK-------TYSNEVVTLWYRPPDVLLG---------STEYSTPIDMWGVGCILYEMATGRPM 203 (288)
T ss_pred CCEEECcCcceeeccCCCc-------cccCceecccccChHHhcC---------CcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123456888999998742 23578899999999999999999999
Q ss_pred CCchHHHH----HHhcCCC--------------------CC------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRGQYD--------------------PS------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~--------------------~~------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... +.+.... +. .......++++++||.+||+.||.+|||++|++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 204 FPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred CCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 96543221 1110000 00 001123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 284 ~h 285 (288)
T cd07871 284 RH 285 (288)
T ss_pred cC
Confidence 98
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=248.93 Aligned_cols=276 Identities=17% Similarity=0.251 Sum_probs=218.9
Q ss_pred CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCcccccc
Q 000470 1070 HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1149 (1472)
Q Consensus 1070 ~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~ 1149 (1472)
.-+|||+|.|.|||+|...++. +..+.....+.|..+...|+++.||+|+. ..||+||+.+.+
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~------C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~n---------- 72 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGI------CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNN---------- 72 (311)
T ss_pred ceEEEeccCcceeeeeehhcCe------EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCC----------
Confidence 3589999999999999999887 45566667778999999999999988885 679999998421
Q ss_pred CcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeC
Q 000470 1150 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSS 1229 (1472)
Q Consensus 1150 ~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGss 1229 (1472)
..++..+..+ ..-|..+.|..+ |..+++|+.||++++||+|...+.+.++ |..+|++++.+|++.-|++|..
T Consensus 73 -p~Pv~t~e~h-~kNVtaVgF~~d---grWMyTgseDgt~kIWdlR~~~~qR~~~---~~spVn~vvlhpnQteLis~dq 144 (311)
T KOG0315|consen 73 -PNPVATFEGH-TKNVTAVGFQCD---GRWMYTGSEDGTVKIWDLRSLSCQRNYQ---HNSPVNTVVLHPNQTELISGDQ 144 (311)
T ss_pred -CCceeEEecc-CCceEEEEEeec---CeEEEecCCCceEEEEeccCcccchhcc---CCCCcceEEecCCcceEEeecC
Confidence 1233344433 344677889988 8899999999999999999987777665 4689999999999999999999
Q ss_pred CCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1230 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1230 dG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
+|.|++||++...+...+......+|.++.. +|++. +++++...|...+|++-..+-...+.
T Consensus 145 sg~irvWDl~~~~c~~~liPe~~~~i~sl~v-~~dgs---------ml~a~nnkG~cyvW~l~~~~~~s~l~-------- 206 (311)
T KOG0315|consen 145 SGNIRVWDLGENSCTHELIPEDDTSIQSLTV-MPDGS---------MLAAANNKGNCYVWRLLNHQTASELE-------- 206 (311)
T ss_pred CCcEEEEEccCCccccccCCCCCcceeeEEE-cCCCc---------EEEEecCCccEEEEEccCCCccccce--------
Confidence 9999999999887777666556678999988 77665 78888888999999987633222211
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
|..+ ...|...+..+.++|++ +|+|+|+|.++++|+.++- +
T Consensus 207 -----------P~~k----------------------~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~---~-- 248 (311)
T KOG0315|consen 207 -----------PVHK----------------------FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF---F-- 248 (311)
T ss_pred -----------Ehhh----------------------eecccceEEEEEECCCCcEEEeecCCceEEEEecCCc---e--
Confidence 1111 23455678888999999 6779999999999998754 0
Q ss_pred eCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1389 CGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1389 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
..| ..+.||+..+++.+ |+.+++||+||+.|+++
T Consensus 249 ------------------------kle---------------------~~l~gh~rWvWdc~-FS~dg~YlvTassd~~~ 282 (311)
T KOG0315|consen 249 ------------------------KLE---------------------LVLTGHQRWVWDCA-FSADGEYLVTASSDHTA 282 (311)
T ss_pred ------------------------eeE---------------------EEeecCCceEEeee-eccCccEEEecCCCCce
Confidence 011 12346999999996 99999999999999999
Q ss_pred EEcC
Q 000470 1469 KVWK 1472 (1472)
Q Consensus 1469 kVWk 1472 (1472)
++|+
T Consensus 283 rlW~ 286 (311)
T KOG0315|consen 283 RLWD 286 (311)
T ss_pred eecc
Confidence 9996
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=279.84 Aligned_cols=217 Identities=23% Similarity=0.250 Sum_probs=169.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||.+..+|..|++++..|++||||+ |+|+...++++ .+++..+++++.+++.||+|||-.|||.||||||||||-
T Consensus 134 lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr 213 (459)
T KOG0610|consen 134 LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR 213 (459)
T ss_pred cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe
Confidence 589999999999999999999999999 69999988764 599999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccC-C----CCC--------------CCCC------------------------------ceeec
Q 000470 78 SWNWLYLSDFASFKPTYI-P----YDD--------------PSDF------------------------------SFFFD 108 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~-~----~~~--------------~~~~------------------------------~~~~~ 108 (1472)
++|++.|+||.++..... | ... +..| ...-.
T Consensus 214 edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSn 293 (459)
T KOG0610|consen 214 EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSN 293 (459)
T ss_pred cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccc
Confidence 999999999987654321 1 000 0000 01112
Q ss_pred cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCCCCcccCC--CCCHH
Q 000470 109 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK--IPDSG 186 (1472)
Q Consensus 109 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~--~~~~~ 186 (1472)
...||-.|+|||++. +...+.++|.|+||+++|||+.|..||.+....+...+.......++. ..+..
T Consensus 294 SFVGThEYlAPEvI~----------G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~ 363 (459)
T KOG0610|consen 294 SFVGTHEYLAPEVIR----------GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSA 363 (459)
T ss_pred ccccccccccceeee----------cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhH
Confidence 345788899999876 345678999999999999999999999876655443333332222332 34568
Q ss_pred HHHHHHHhcccCcCCCCC----HHHHHHHhhcccCCCCCChhhhhhhhccCC
Q 000470 187 IRKMILHMIQLEPELRFS----AESYLQNYAAVVFPTYFSPFLHNFYCCWNP 234 (1472)
Q Consensus 187 l~~LI~~mL~~dP~~Rps----a~elL~~~~~~~fp~~f~~~l~~~~~~~~~ 234 (1472)
++|||+++|.+||.+|.. |.||-+| ++|...-.+.+.+..|
T Consensus 364 akDLIr~LLvKdP~kRlg~~rGA~eIK~H-------pFF~gVnWaLir~~~P 408 (459)
T KOG0610|consen 364 AKDLIRKLLVKDPSKRLGSKRGAAEIKRH-------PFFEGVNWALIRCARP 408 (459)
T ss_pred HHHHHHHHhccChhhhhccccchHHhhcC-------ccccCCChhheeccCC
Confidence 999999999999999998 9999998 6666555555554443
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=297.28 Aligned_cols=193 Identities=17% Similarity=0.194 Sum_probs=161.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~ 133 (321)
T cd05591 54 KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG 133 (321)
T ss_pred CCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 79999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|++||
T Consensus 134 ~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~tg~~Pf 196 (321)
T cd05591 134 HCKLADFGMCKEGILNGV-------TTTTFCGTPDYIAPEILQ----------ELEYGPSVDWWALGVLMYEMMAGQPPF 196 (321)
T ss_pred CEEEeecccceecccCCc-------cccccccCccccCHHHHc----------CCCCCCccceechhHHHHHHhcCCCCC
Confidence 999999998875322111 123445789999999774 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-------CHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-------SAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-------sa~elL~~ 211 (1472)
...................+...+.++.++|.+||+.||++|+ +++++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 197 EADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 7655443333222222334455678999999999999999999 89999988
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-30 Score=274.89 Aligned_cols=205 Identities=20% Similarity=0.201 Sum_probs=169.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+|+||+.++++||++..+|||||-|. |.|...|.++..+++.|+..+..+|+.||.|||.+||.||||||||||..+.+
T Consensus 134 gh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn 213 (463)
T KOG0607|consen 134 GHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN 213 (463)
T ss_pred CCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence 69999999999999999999999999 69999999999999999999999999999999999999999999999998877
Q ss_pred c---EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 81 W---LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 81 ~---vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
. +|||||.+........+-.....--+.+.+|+..|||||+..-. +.....|++++|.||||+|+|-|+.|.
T Consensus 214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~f-----v~qA~~YDKrCDlwSLGvIlYImLsGY 288 (463)
T KOG0607|consen 214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVF-----VDQATFYDKRCDLWSLGVILYIMLSGY 288 (463)
T ss_pred CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhh-----ccccccccccccHHHHHHHHHHHHhCC
Confidence 5 89999976543322222111122234578899999999986422 344567999999999999999999999
Q ss_pred CCCCch------------------H-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS------------------H-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~------------------~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|||.+. . ...+..+.|..+..-+...+.+.++||..+|.+|+.+|.++.++++|
T Consensus 289 pPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 289 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 999421 1 23456677775544444556789999999999999999999999988
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=294.95 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=160.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~ 133 (316)
T cd05592 54 EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG 133 (316)
T ss_pred CCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC
Confidence 79999999999999999999999998 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++...... ......+|++.|+|||.+. +..++.++||||+||++|||++|..||
T Consensus 134 ~~kL~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~G~~Pf 196 (316)
T cd05592 134 HIKIADFGMCKENMNGE-------GKASTFCGTPDYIAPEILK----------GQKYNESVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred CEEEccCcCCeECCCCC-------CccccccCCccccCHHHHc----------CCCCCCcccchhHHHHHHHHHhCCCCC
Confidence 99999999987542211 1123456889999999874 345788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH-HHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE-SYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~-elL~~ 211 (1472)
..................++...+.++++||.+||+.||++||++. ++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 197 HGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 7554433322222223345566778899999999999999999864 67776
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=250.21 Aligned_cols=303 Identities=20% Similarity=0.263 Sum_probs=238.4
Q ss_pred ceeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
.+..+|++|.+.|+.++..+. ...++++|.|.++.+|++.+.+. ........+.+|...|..+..+++|+..++++.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~-~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI-KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc-ccCceeeeeeccceEecceEEccCCceEEecccc
Confidence 356789999999999999886 45899999999999999987532 1223556788899999999999999999999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|++++||+.+. ...+....|...|.+++|+++ ...+++|+.|.+|.+|++.. .+..++....
T Consensus 85 ~~lrlWDl~~g--------------~~t~~f~GH~~dVlsva~s~d---n~qivSGSrDkTiklwnt~g-~ck~t~~~~~ 146 (315)
T KOG0279|consen 85 GTLRLWDLATG--------------ESTRRFVGHTKDVLSVAFSTD---NRQIVSGSRDKTIKLWNTLG-VCKYTIHEDS 146 (315)
T ss_pred ceEEEEEecCC--------------cEEEEEEecCCceEEEEecCC---CceeecCCCcceeeeeeecc-cEEEEEecCC
Confidence 99999999841 122334466777888999999 56899999999999999974 5556666555
Q ss_pred CccceEEEEEcCC--CCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1208 EEGYVSSLVTGPC--GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1208 h~g~Itsl~~sp~--g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
+.+.|+|++|+|+ ...|++++.|++|++||++..+....+.. |..-++.+.+ +|++. ++++|+.||+
T Consensus 147 ~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~v-SpDGs---------lcasGgkdg~ 215 (315)
T KOG0279|consen 147 HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTV-SPDGS---------LCASGGKDGE 215 (315)
T ss_pred CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEE-CCCCC---------EEecCCCCce
Confidence 5889999999997 68999999999999999998877766553 6667788777 77664 7888888999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcE
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1365 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~l 1365 (1472)
+.+||+..+++.+.+. +...|++++|+|+.+.
T Consensus 216 ~~LwdL~~~k~lysl~------------------------------------------------a~~~v~sl~fspnryw 247 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYSLE------------------------------------------------AFDIVNSLCFSPNRYW 247 (315)
T ss_pred EEEEEccCCceeEecc------------------------------------------------CCCeEeeEEecCCcee
Confidence 9999999998866654 1126999999999988
Q ss_pred EEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccc
Q 000470 1366 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1445 (1472)
Q Consensus 1366 lTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1445 (1472)
++...+..|++||+++......+. .+..++ ..+.-.-.
T Consensus 248 L~~at~~sIkIwdl~~~~~v~~l~---~d~~g~---------------------------------------s~~~~~~~ 285 (315)
T KOG0279|consen 248 LCAATATSIKIWDLESKAVVEELK---LDGIGP---------------------------------------SSKAGDPI 285 (315)
T ss_pred EeeccCCceEEEeccchhhhhhcc---cccccc---------------------------------------ccccCCcE
Confidence 888888889999998765533221 111000 00011223
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1446 ILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1446 I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..++| |+.+|..|.+|..||.|++|.
T Consensus 286 clsla-ws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 286 CLSLA-WSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred EEEEE-EcCCCcEEEeeecCCcEEEEE
Confidence 46676 899999999999999999993
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=299.37 Aligned_cols=194 Identities=17% Similarity=0.175 Sum_probs=162.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++.+++.+...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus 52 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~ 131 (325)
T cd05594 52 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 131 (325)
T ss_pred CCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC
Confidence 479999999999999999999999999 6999999887789999999999999999999997 79999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|..
T Consensus 132 ~~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tG~~ 194 (325)
T cd05594 132 DGHIKITDFGLCKEGIKDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRL 194 (325)
T ss_pred CCCEEEecCCCCeecCCCCc-------ccccccCCcccCCHHHHc----------cCCCCCccccccccceeeeeccCCC
Confidence 99999999999874321111 123446889999999874 3467889999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
||..................++...++++++||.+||+.||++|+ ++.++++|
T Consensus 195 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 195 PFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 986554433333222222334556778999999999999999997 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=298.63 Aligned_cols=196 Identities=24% Similarity=0.249 Sum_probs=171.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
|.|.|||+|.+.+..++.+-|+||-++ |+|.+++..+ +++ ++...-++.+||++||.|||++.|||||||-+|+||
T Consensus 629 LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLv 708 (1226)
T KOG4279|consen 629 LRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLV 708 (1226)
T ss_pred HhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEE
Confidence 579999999999999999999999999 6999999764 556 888999999999999999999999999999999999
Q ss_pred c-cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 T-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~-~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+ -.|.+||+|||-+|+... .+-...|..||..|||||++. .....|++++|||||||++.||.|
T Consensus 709 NTySGvlKISDFGTsKRLAg-------inP~TETFTGTLQYMAPEvID--------qG~RGYG~aADIWS~GCT~vEMAT 773 (1226)
T KOG4279|consen 709 NTYSGVLKISDFGTSKRLAG-------INPCTETFTGTLQYMAPEVID--------QGPRGYGKAADIWSFGCTMVEMAT 773 (1226)
T ss_pred eeccceEEecccccchhhcc-------CCccccccccchhhhChHhhc--------cCCcCCCchhhhhhccceeEeecc
Confidence 6 468999999999987632 223446777999999999986 334579999999999999999999
Q ss_pred CCCCCC---chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFE---LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~---~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+|||. ..+-..++.+-|...+.+|...+.+++.||.+|+..||.+||+|.++|++
T Consensus 774 GrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 774 GRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 999994 34455567788888788888888999999999999999999999999986
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=256.64 Aligned_cols=329 Identities=15% Similarity=0.237 Sum_probs=253.6
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
-+.+|.+|+++|.+++.+|+.+++|||+.|....||++.+++ ......+|+..|+++.|+.+|.+||+|+.+|.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGK 129 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc------ceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence 467899999999999999999999999999999999999987 44567789999999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|+||++.+.. ...... .+..-+..+.|+|. +.+|++|+.||.+.+|.+..+...+.+.+ |.
T Consensus 130 v~v~~~stg~-------------~~~~~~-~e~~dieWl~WHp~---a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~ 190 (399)
T KOG0296|consen 130 VLVFKVSTGG-------------EQWKLD-QEVEDIEWLKWHPR---AHILLAGSTDGSVWMWQIPSQALCKVMSG--HN 190 (399)
T ss_pred EEEEEcccCc-------------eEEEee-cccCceEEEEeccc---ccEEEeecCCCcEEEEECCCcceeeEecC--CC
Confidence 9999997411 112222 34455667789997 78999999999999999998777777766 89
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1210 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1210 g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
..+++=+|.|+|..+++|..||+|++||+.++.++..........-.++.+ ...+..++.+..++.+.+-
T Consensus 191 ~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~----------~~~~~~~~~g~~e~~~~~~ 260 (399)
T KOG0296|consen 191 SPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL----------NLAGSTLTKGNSEGVACGV 260 (399)
T ss_pred CCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc----------ccccceeEeccCCccEEEE
Confidence 999999999999999999999999999999999888777544333444433 2234467777778888888
Q ss_pred EcCCCeEEEEEecccCCCC-------CccCCCcccccCCCCCCCCCccccccccccccc-----cccCCCCCCcCCceEe
Q 000470 1290 NAENGSCHQVLRTANYDGD-------TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRV-----DELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~V~sl 1357 (1472)
+..+|+.+.+......... .+....++.-..|+.. .+...+.+.+ ..+.....|..+|..+
T Consensus 261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A-------~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l 333 (399)
T KOG0296|consen 261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAA-------CGSVDGTIAIYDLAASTLRHICEHEDGVTKL 333 (399)
T ss_pred ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhh-------cccccceEEEEecccchhheeccCCCceEEE
Confidence 8888887777663111110 1111222222222221 1122222333 3334446677889999
Q ss_pred ccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcC
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1358 ~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1437 (1472)
.|.++.+|+|++.||+||.||.+++...+.+.|
T Consensus 334 ~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G----------------------------------------------- 366 (399)
T KOG0296|consen 334 KWLNTDYLLTACANGKVRQWDARTGQLKFTYTG----------------------------------------------- 366 (399)
T ss_pred EEcCcchheeeccCceEEeeeccccceEEEEec-----------------------------------------------
Confidence 998877999999999999999998877665554
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|+..|.+++ +.++.++++|+|.|++.+||+
T Consensus 367 ----H~~~Il~f~-ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 367 ----HQMGILDFA-LSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred ----CchheeEEE-EcCCCcEEEEecCCCeEEEEe
Confidence 999999996 899999999999999999985
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=294.78 Aligned_cols=194 Identities=16% Similarity=0.208 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~ 132 (316)
T cd05619 53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD 132 (316)
T ss_pred cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence 379999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 133 GHIKIADFGMCKENMLGDA-------KTCTFCGTPDYIAPEILL----------GQKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred CCEEEccCCcceECCCCCC-------ceeeecCCccccCHHHHc----------CCCCCchhhhhhHHHHHHHHHhCCCC
Confidence 9999999999875322111 112345788999999874 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH-HHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE-SYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~-elL~~ 211 (1472)
|...................+...+..++++|.+||+.||++||++. ++++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 196 FHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred CCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 96554333222111112234455678899999999999999999996 78777
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=310.54 Aligned_cols=193 Identities=20% Similarity=0.238 Sum_probs=159.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...||||||++ |+|.+++.. +..+++.++..++.||+.||.|||++||+||||||+|||
T Consensus 122 l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIl 201 (478)
T PTZ00267 122 CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIF 201 (478)
T ss_pred CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEE
Confidence 589999999999999999999999998 699887743 456899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++....... .....+.+||+.|+|||++. +..++.++|||||||++|||++
T Consensus 202 l~~~~~~kL~DFgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~t 266 (478)
T PTZ00267 202 LMPTGIIKLGDFGFSKQYSDSVS-----LDVASSFCGTPYYLAPELWE----------RKRYSKKADMWSLGVILYELLT 266 (478)
T ss_pred ECCCCcEEEEeCcCceecCCccc-----cccccccCCCccccCHhHhC----------CCCCCcHHhHHHHHHHHHHHHh
Confidence 99999999999999876522110 11123456899999999764 3467899999999999999999
Q ss_pred CCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||........ ..+.+. ..+...+..+++||.+||..||++||++++++.+
T Consensus 267 g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 267 LHRPFKGPSQREIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 9999875443322 222222 2344566789999999999999999999999987
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=290.66 Aligned_cols=195 Identities=22% Similarity=0.310 Sum_probs=154.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 60 l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~ 139 (303)
T cd07869 60 LKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT 139 (303)
T ss_pred CCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 5899999999999999999999999999999988764 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+. .......+++.|+|||++.. ...++.++||||+||++|||++|.+|
T Consensus 140 ~~~kl~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~p 203 (303)
T cd07869 140 GELKLADFGLARAKSVPS-------HTYSNEVVTLWYRPPDVLLG---------STEYSTCLDMWGVGCIFVEMIQGVAA 203 (303)
T ss_pred CCEEECCCCcceeccCCC-------ccCCCCcccCCCCChHHHcC---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 999999999987542211 11234557889999998742 23578899999999999999999999
Q ss_pred CCchH-----HHHHHh--cC--------------CCCC-------cc----cCC-CCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSH-----LLAYRR--GQ--------------YDPS-------QH----LEK-IPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~-----~~~~~~--~~--------------~~~~-------~~----l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|.... +..... +. +.+. .. +.. ..++.+++||.+||+.||++|||++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~ 283 (303)
T cd07869 204 FPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ 283 (303)
T ss_pred CCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH
Confidence 96421 111111 00 0000 00 000 1235789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 284 ~~l~h 288 (303)
T cd07869 284 AALSH 288 (303)
T ss_pred HHhcC
Confidence 99998
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=271.44 Aligned_cols=283 Identities=15% Similarity=0.229 Sum_probs=237.1
Q ss_pred ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1056 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1056 ~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.-+-.|+.|.|.|+|+.|+|||..|.+.+|+..... .......|...|.++.|++++.++++|+.+|.|++|+.
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceee------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEeccc
Confidence 345689999999999999999999999999985432 34455678899999999999999999999999999988
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.. ..+.....++...|.+++|+|+ ...+++++.||+|++||.+..+....+.+ |.-.|+|+
T Consensus 168 nm--------------nnVk~~~ahh~eaIRdlafSpn---DskF~t~SdDg~ikiWdf~~~kee~vL~G--HgwdVksv 228 (464)
T KOG0284|consen 168 NM--------------NNVKIIQAHHAEAIRDLAFSPN---DSKFLTCSDDGTIKIWDFRMPKEERVLRG--HGWDVKSV 228 (464)
T ss_pred ch--------------hhhHHhhHhhhhhhheeccCCC---CceeEEecCCCeEEEEeccCCchhheecc--CCCCccee
Confidence 62 1233344566678999999997 45999999999999999999998888866 77889999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1295 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~ 1295 (1472)
+|+|....+++|+.|..|++||.|++.++.++.. |...|..+.| .|.+ +|+++++.|..++++|+++.+
T Consensus 229 dWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f-~~n~---------N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 229 DWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKF-NPNG---------NWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred ccCCccceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEE-cCCC---------CeeEEccCCceEEEEehhHhH
Confidence 9999999999999999999999999999998765 6677999988 6654 599999999999999999776
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--cEEEccCCCe
Q 000470 1296 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGGTDLK 1373 (1472)
Q Consensus 1296 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~llTgg~Dg~ 1373 (1472)
-+++++ +|...|+++.|+|-. .|.+||.||.
T Consensus 298 El~~~r-----------------------------------------------~Hkkdv~~~~WhP~~~~lftsgg~Dgs 330 (464)
T KOG0284|consen 298 ELFTYR-----------------------------------------------GHKKDVTSLTWHPLNESLFTSGGSDGS 330 (464)
T ss_pred HHHHhh-----------------------------------------------cchhhheeeccccccccceeeccCCCc
Confidence 555554 333478999999854 7789999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee
Q 000470 1374 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1453 (1472)
Q Consensus 1374 IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1453 (1472)
|.+|.+...+.. .....+|...|++++ ++
T Consensus 331 vvh~~v~~~~p~--------------------------------------------------~~i~~AHd~~iwsl~-~h 359 (464)
T KOG0284|consen 331 VVHWVVGLEEPL--------------------------------------------------GEIPPAHDGEIWSLA-YH 359 (464)
T ss_pred eEEEeccccccc--------------------------------------------------cCCCcccccceeeee-cc
Confidence 999998622221 011234999999996 99
Q ss_pred cCCcEEEEEcCCceEEEcC
Q 000470 1454 LNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1454 ~~~~~LvS~s~DG~IkVWk 1472 (1472)
|-|.+|+|||.|.++++|-
T Consensus 360 PlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 360 PLGHILATGSNDRTVRFWT 378 (464)
T ss_pred ccceeEeecCCCcceeeec
Confidence 9999999999999999993
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=297.40 Aligned_cols=192 Identities=20% Similarity=0.237 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||++ |+|.+++.....+.+..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 ~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~ 132 (325)
T cd05602 53 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ 132 (325)
T ss_pred CCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence 579999999999999999999999999 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 133 GHIVLTDFGLCKENIEHNG-------TTSTFCGTPEYLAPEVLH----------KQPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CCEEEccCCCCcccccCCC-------CcccccCCccccCHHHHc----------CCCCCCccccccccHHHHHHhcCCCC
Confidence 9999999999875321111 123456889999999775 34678899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|...................+...+..++++|.+||+.||.+|+++.+.+
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 196 FYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 86554333222222222223344567899999999999999999887433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=293.17 Aligned_cols=190 Identities=26% Similarity=0.293 Sum_probs=166.6
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC--
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-- 79 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~-- 79 (1472)
||||+.++++|++...+|+|||+|. |.|+++|..+ .+++.++..++.|++.|++|||+.||+||||||||+|+...
T Consensus 95 hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 95 HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC
Confidence 9999999999999999999999999 6999999887 49999999999999999999999999999999999999754
Q ss_pred --CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 80 --NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 80 --~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+.+|++|||+++.... ...+.+.+||+.|+|||++. ...|+..+||||+|+++|.|++|.
T Consensus 174 ~~~~ik~~DFGla~~~~~--------~~~~~~~~Gtp~y~APEvl~----------~~~y~~~~DiWS~Gvi~yiLL~G~ 235 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP--------GERLHTIVGTPEYVAPEVLG----------GRPYGDEVDVWSIGVILYILLSGV 235 (382)
T ss_pred CCCcEEEeeCCCceEccC--------CceEeeecCCccccCchhhc----------CCCCCcccchhHHHHHHHHHhhCC
Confidence 4799999999986522 23457788999999999764 358899999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||...+ ..++.++.+......+...+..++++|.+||..||.+|+++.++|+|
T Consensus 236 ~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 236 PPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 8886543 34566777765555555568899999999999999999999999998
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=293.97 Aligned_cols=193 Identities=18% Similarity=0.184 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|..++.. ..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 59 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~ 137 (324)
T cd05589 59 ERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE 137 (324)
T ss_pred cCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC
Confidence 479999999999999999999999999 599888865 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ...+..|++.|+|||.+. +..++.++|||||||++|||++|++|
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 138 GFVKIADFGLCKEGMGFGD-------RTSTFCGTPEFLAPEVLT----------ETSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred CcEEeCcccCCccCCCCCC-------cccccccCccccCHhHhc----------CCCCCcccchhhHHHHHHHHHhCCCC
Confidence 9999999998764321111 123456789999999774 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...................+...++.+.++|.+||+.||.+|| ++.++++|
T Consensus 201 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 201 FPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 97654433322222222234455678899999999999999999 68999988
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=297.65 Aligned_cols=196 Identities=22% Similarity=0.242 Sum_probs=176.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||||+++.+++++..+|+||||+. |.+++++.+.+.+.+.+++.++.|++.|++|||+++|||||||.+|||++.+
T Consensus 112 l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~ 191 (596)
T KOG0586|consen 112 LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN 191 (596)
T ss_pred cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc
Confidence 689999999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.++||+|||++.... .....++.||++.|.|||+|.+.. ..++++|+||+|+++|.|+.|..|
T Consensus 192 mnikIaDfgfS~~~~--------~~~~lqt~cgsppyAaPEl~~g~~---------y~gpe~D~Wslgvvly~LV~GsLP 254 (596)
T KOG0586|consen 192 MNIKIADFGFSTFFD--------YGLMLQTFCGSPPYAAPELFNGKK---------YDGPEVDIWSLGVVLYALVEGSLP 254 (596)
T ss_pred cceeeeccccceeec--------ccccccccCCCCCccChHhhcCcc---------cCCcceehhhhhhhheeeeecccc
Confidence 999999999886552 334568999999999999997543 347899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++..+...+.........++...+.++++||++||.++|.+|++.+++.+|.|
T Consensus 255 FDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 255 FDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred cCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 999888877665555555566667788999999999999999999999999854
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=320.34 Aligned_cols=201 Identities=21% Similarity=0.238 Sum_probs=167.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|||+|+||++-.+....||.||||+ |+|.+.+....-.++...+++..|++.|+.|||++|||||||||+||+++.+
T Consensus 1291 lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1291 LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN 1370 (1509)
T ss_pred ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC
Confidence 689999999999999999999999999 7999999887778999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+|+.|||.|+.+..+. .+...-.....||+.|||||+|.+... .....++||||||||+.||+||+.|
T Consensus 1371 g~iK~~DFGsa~ki~~~~---~~~~~el~~~~GT~~YMAPEvit~t~~-------kG~~~A~DiWslGCVVlEM~tGkrP 1440 (1509)
T KOG4645|consen 1371 GLIKYGDFGSAVKIKNNA---QTMPGELQSMMGTPMYMAPEVITGTKG-------KGHGGAADIWSLGCVVLEMATGKRP 1440 (1509)
T ss_pred CcEEeecccceeEecCch---hcCCHHHHhhcCCchhcCchhhccccc-------CCCCcchhhhcccceEEEeecCCCc
Confidence 999999999998764432 112222345678999999999985532 2456789999999999999999888
Q ss_pred CC-chHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FE-LSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~-~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|. .+..+.+. +-.....+.+|...+.+.++||.+||+.||++|.++.|+++|
T Consensus 1441 W~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1441 WAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 84 44433332 222223345666688899999999999999999999999998
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=290.10 Aligned_cols=194 Identities=19% Similarity=0.142 Sum_probs=165.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||.+||+.|..+..++++||||. |++.+.++..+.+.+.++.+++++++.||.|+|.++.+|||||+.|||+...
T Consensus 68 ~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~ 147 (467)
T KOG0201|consen 68 CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES 147 (467)
T ss_pred cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc
Confidence 578999999999999999999999999 6999999998888999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+...... .....+..||+.|||||++. ...|+.++||||||++.+||++|.||
T Consensus 148 g~vkl~DfgVa~ql~~~-------~~rr~tfvGTPfwMAPEVI~----------~~~Y~~KADIWSLGITaiEla~GePP 210 (467)
T KOG0201|consen 148 GDVKLADFGVAGQLTNT-------VKRRKTFVGTPFWMAPEVIK----------QSGYDTKADIWSLGITAIELAKGEPP 210 (467)
T ss_pred CcEEEEecceeeeeech-------hhccccccccccccchhhhc----------cccccchhhhhhhhHHHHHHhcCCCC
Confidence 99999999988654221 12226778999999999875 34789999999999999999999999
Q ss_pred CCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..-....+.- .....++.+....++.+++||..||.+||+.||+|.++|+|
T Consensus 211 ~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 211 HSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 96443322211 11223444566778889999999999999999999999998
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=299.49 Aligned_cols=195 Identities=21% Similarity=0.195 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+++++++..+...|+|+|++.++|++++..+..+++.+++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 140 l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~ 219 (391)
T PHA03212 140 INHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG 219 (391)
T ss_pred CCCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC
Confidence 68999999999999999999999999999999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC-
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF- 159 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p- 159 (1472)
.+||+|||+++....... .......||+.|+|||++. +..++.++||||+||++|||++|.+|
T Consensus 220 ~vkL~DFG~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 220 DVCLGDFGAACFPVDINA------NKYYGWAGTIATNAPELLA----------RDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred CEEEEeCCcccccccccc------cccccccCccCCCChhhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 999999999864311110 0112346899999999774 34678999999999999999999644
Q ss_pred CCch----------HHHHHHhcC--------------------------CC-C--CcccC--CCCCHHHHHHHHHhcccC
Q 000470 160 FELS----------HLLAYRRGQ--------------------------YD-P--SQHLE--KIPDSGIRKMILHMIQLE 198 (1472)
Q Consensus 160 f~~~----------~~~~~~~~~--------------------------~~-~--~~~l~--~~~~~~l~~LI~~mL~~d 198 (1472)
|... .+..+.... .. + .+.+. ...+.++++||.+||+.|
T Consensus 284 ~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d 363 (391)
T PHA03212 284 FEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD 363 (391)
T ss_pred CCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC
Confidence 4321 111111000 00 0 00000 012457899999999999
Q ss_pred cCCCCCHHHHHHH
Q 000470 199 PELRFSAESYLQN 211 (1472)
Q Consensus 199 P~~Rpsa~elL~~ 211 (1472)
|++||||+|+|+|
T Consensus 364 P~~Rpta~elL~h 376 (391)
T PHA03212 364 AHHRPSAEALLDF 376 (391)
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999998
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=293.80 Aligned_cols=193 Identities=18% Similarity=0.207 Sum_probs=157.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~ 133 (329)
T cd05618 54 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 133 (329)
T ss_pred CCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence 79999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....+.. ......|++.|+|||.+. +..++.++|||||||++|||++|.+||
T Consensus 134 ~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf 196 (329)
T cd05618 134 HIKLTDYGMCKEGLRPGD-------TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred CEEEeeCCccccccCCCC-------ccccccCCccccCHHHHc----------CCCCCCccceecccHHHHHHhhCCCCC
Confidence 999999999874322111 112346789999999775 346788999999999999999999998
Q ss_pred Cch---------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELS---------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~---------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
... ...............++...+..+++||.+||+.||++|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 197 DIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 421 01111111112222355566788999999999999999998 5789888
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=266.00 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=229.0
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..|++|++.|+-+.||++|+++||||.|.|+-+|++....+ ++-..+..+|..+|.-+.|+|+.+++++|+.|..+.
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 46899999999999999999999999999999999875443 455678888999999999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+||+++.. ....+...++..+.+++|.|| |..+++|+.|++|..||+... .....++ .....
T Consensus 295 lwDv~tgd-------------~~~~y~~~~~~S~~sc~W~pD---g~~~V~Gs~dr~i~~wdlDgn-~~~~W~g-vr~~~ 356 (519)
T KOG0293|consen 295 LWDVDTGD-------------LRHLYPSGLGFSVSSCAWCPD---GFRFVTGSPDRTIIMWDLDGN-ILGNWEG-VRDPK 356 (519)
T ss_pred eccCCcch-------------hhhhcccCcCCCcceeEEccC---CceeEecCCCCcEEEecCCcc-hhhcccc-cccce
Confidence 99998521 122333345777888899999 778999999999999999743 3333332 12356
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000470 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1291 (1472)
Q Consensus 1212 Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl 1291 (1472)
|.++++.+||.++++.+.|..+++++........... ...+|++.+. +. +++++++.-.+.++.+||+
T Consensus 357 v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--e~~~its~~i-S~---------d~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 357 VHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--EEQPITSFSI-SK---------DGKLALVNLQDQEIHLWDL 424 (519)
T ss_pred eEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc--ccCceeEEEE-cC---------CCcEEEEEcccCeeEEeec
Confidence 9999999999999999999999999998877765443 3458999888 43 4568888888999999999
Q ss_pred CCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC-CCcEEEccC
Q 000470 1292 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GGDLLTGGT 1370 (1472)
Q Consensus 1292 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p-~g~llTgg~ 1370 (1472)
+....++.+.++.. ++. -|+++.-.. +.++++|++
T Consensus 425 ~e~~lv~kY~Ghkq-------------------------------------------~~f-iIrSCFgg~~~~fiaSGSE 460 (519)
T KOG0293|consen 425 EENKLVRKYFGHKQ-------------------------------------------GHF-IIRSCFGGGNDKFIASGSE 460 (519)
T ss_pred chhhHHHHhhcccc-------------------------------------------cce-EEEeccCCCCcceEEecCC
Confidence 86544444332111 010 234332222 237889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1450 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1450 (1472)
|++|++|+..+++...+++| |..+|++|+
T Consensus 461 D~kvyIWhr~sgkll~~LsG---------------------------------------------------Hs~~vNcVs 489 (519)
T KOG0293|consen 461 DSKVYIWHRISGKLLAVLSG---------------------------------------------------HSKTVNCVS 489 (519)
T ss_pred CceEEEEEccCCceeEeecC---------------------------------------------------CcceeeEEe
Confidence 99999999988877665654 899999996
Q ss_pred eeecC-CcEEEEEcCCceEEEcC
Q 000470 1451 SVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1451 ~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
|+|. -.|+||||+||+|+||.
T Consensus 490 -wNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 490 -WNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred -cCCCCHHHhhccCCCCeEEEec
Confidence 8875 78899999999999995
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=296.36 Aligned_cols=199 Identities=21% Similarity=0.297 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+||||++++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 56 l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl 135 (338)
T cd07859 56 LRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL 135 (338)
T ss_pred CCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 5899999999988543 35899999999999999988878999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++........ ........|++.|+|||.+... ...++.++|||||||++|||++
T Consensus 136 l~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~--------~~~~~~~~DvwSlGvvl~el~t 203 (338)
T cd07859 136 ANADCKLKICDFGLARVAFNDTPT----AIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWSIGCIFAEVLT 203 (338)
T ss_pred ECCCCcEEEccCccccccccccCc----cccccCCCCCCCcCCHHHHhcc--------ccccCchhHHHHHHHHHHHHHc
Confidence 999999999999998754322111 1122345688999999987421 2367889999999999999999
Q ss_pred CCCCCCchHHHHH---------------------------Hh----cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLAY---------------------------RR----GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~~---------------------------~~----~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||........ .. ....+........++.+.++|.+||+.||++||+
T Consensus 204 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 283 (338)
T cd07859 204 GKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT 283 (338)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC
Confidence 9999964321110 00 0000000111124567899999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 284 ~~e~l~h 290 (338)
T cd07859 284 AEEALAD 290 (338)
T ss_pred HHHHhcC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=266.03 Aligned_cols=287 Identities=24% Similarity=0.397 Sum_probs=230.4
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
++.+.+|.++|++++|+|+++++++|+.||.|++||..+.+ .......|...+.++.|+++++.+++++.||.|
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE------LLRTLKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC------cEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 56788999999999999999999999999999999998754 334556677778899999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
++|++... .....+. .+...+.++.|+++ +.++++++.+|.|.+||+++++....+.. |.+
T Consensus 76 ~i~~~~~~-------------~~~~~~~-~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~ 136 (289)
T cd00200 76 RLWDLETG-------------ECVRTLT-GHTSYVSSVAFSPD---GRILSSSSRDKTIKVWDVETGKCLTTLRG--HTD 136 (289)
T ss_pred EEEEcCcc-------------cceEEEe-ccCCcEEEEEEcCC---CCEEEEecCCCeEEEEECCCcEEEEEecc--CCC
Confidence 99999731 0111222 34456788889987 56888888899999999998887777764 778
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.+++++|+|++.++++|+.+|.|.+||++.+..+..+.. +...|.++.+ +|++ ..+++++.++.|.+||
T Consensus 137 ~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~~---------~~l~~~~~~~~i~i~d 205 (289)
T cd00200 137 WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAF-SPDG---------EKLLSSSSDGTIKLWD 205 (289)
T ss_pred cEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec-CccccceEEE-CCCc---------CEEEEecCCCcEEEEE
Confidence 899999999999999888899999999998888877763 5567888888 6654 3788888899999999
Q ss_pred cCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE-Ecc
Q 000470 1291 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGG 1369 (1472)
Q Consensus 1291 l~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll-Tgg 1369 (1472)
+.+++....+. .+...+.++.|++++.++ +++
T Consensus 206 ~~~~~~~~~~~-----------------------------------------------~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 206 LSTGKCLGTLR-----------------------------------------------GHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred CCCCceecchh-----------------------------------------------hcCCceEEEEEcCCCcEEEEEc
Confidence 98866544432 122268899999988555 666
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEE
Q 000470 1370 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1449 (1472)
Q Consensus 1370 ~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1449 (1472)
.|+.|++||+.+.+....+. .|...|.++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~---------------------------------------------------~~~~~i~~~ 267 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLS---------------------------------------------------GHTNSVTSL 267 (289)
T ss_pred CCCcEEEEEcCCceeEEEcc---------------------------------------------------ccCCcEEEE
Confidence 69999999987643322111 277889999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000470 1450 GSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+ |++++.+|++++.||.|++|+
T Consensus 268 ~-~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 268 A-WSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred E-ECCCCCEEEEecCCCeEEecC
Confidence 5 899999999999999999997
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=293.83 Aligned_cols=193 Identities=17% Similarity=0.205 Sum_probs=158.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~ 133 (329)
T cd05588 54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG 133 (329)
T ss_pred CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....+.. ...+..|++.|+|||++. +..++.++||||+||++|||++|++||
T Consensus 134 ~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~g~~Pf 196 (329)
T cd05588 134 HIKLTDYGMCKEGIRPGD-------TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred CEEECcCccccccccCCC-------ccccccCCccccCHHHHc----------CCCCCCccceechHHHHHHHHHCCCCc
Confidence 999999999874322111 123456789999999875 346788999999999999999999999
Q ss_pred CchH--------HHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELSH--------LLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~~--------~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
+... ... ...........++...+..+.+||.+||+.||.+|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 197 DIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred ccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 5311 111 1111111122345556788999999999999999997 7899988
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=295.93 Aligned_cols=194 Identities=19% Similarity=0.207 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 55 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 134 (318)
T cd05582 55 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 134 (318)
T ss_pred CCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC
Confidence 589999999999999999999999998 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....... ......|++.|+|||.+. ...++.++|||||||++|||++|+.|
T Consensus 135 ~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p 197 (318)
T cd05582 135 GHIKLTDFGLSKESIDHEK-------KAYSFCGTVEYMAPEVVN----------RRGHTQSADWWSFGVLMFEMLTGSLP 197 (318)
T ss_pred CcEEEeeccCCcccCCCCC-------ceecccCChhhcCHHHHc----------CCCCCCccceeccceEeeeeccCCCC
Confidence 9999999999875422111 112346789999999775 23567899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|..................++...++.+++||.+||+.||++||+ ++++++|
T Consensus 198 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 198 FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 976544333222222223345556789999999999999999999 5667766
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=294.59 Aligned_cols=194 Identities=19% Similarity=0.229 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 53 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~ 132 (321)
T cd05603 53 LKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ 132 (321)
T ss_pred CCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence 579999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....+.. ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 133 GHVVLTDFGLCKEGVEPEE-------TTSTFCGTPEYLAPEVLR----------KEPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred CCEEEccCCCCccCCCCCC-------ccccccCCcccCCHHHhc----------CCCCCCcCcccccchhhhhhhcCCCC
Confidence 9999999998864322111 112346789999999874 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH----HHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE----SYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~----elL~~ 211 (1472)
|...+..............++...+..+.++|.+||+.||.+|+++. |+++|
T Consensus 196 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 196 FYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 97655444333222222334555677899999999999999999764 66665
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=291.82 Aligned_cols=193 Identities=18% Similarity=0.227 Sum_probs=161.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++.+..|+||||++ |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++
T Consensus 54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~ 133 (318)
T cd05570 54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG 133 (318)
T ss_pred CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998887899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... .....+|++.|+|||.+. +..++.++||||+||++|+|++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslGvil~~l~~G~~pf 196 (318)
T cd05570 134 HIKIADFGMCKEGILGGV-------TTSTFCGTPDYIAPEILS----------YQPYGPAVDWWALGVLLYEMLAGQSPF 196 (318)
T ss_pred cEEecccCCCeecCcCCC-------cccceecCccccCHHHhc----------CCCCCcchhhhhHHHHHHHHhhCCCCC
Confidence 999999998864321111 112345788999999875 346788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
...................+...+..+++||.+||+.||++||++ .++++|
T Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 197 EGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 765443333222222233455667899999999999999999999 999988
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=294.51 Aligned_cols=195 Identities=20% Similarity=0.236 Sum_probs=160.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||++ |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 63 QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++........ ......|++.|+|||.+.. ...++.++|||||||++|||++|.+||
T Consensus 143 ~~kl~DfG~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwslG~il~elltg~~pf 207 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEKE------RTYSFCGTIEYMAPEIIRG---------KGGHGKAVDWWSLGILIFELLTGASPF 207 (332)
T ss_pred CEEEeeCcCCccccccCCC------ccccccCCccccCHHHhcC---------CCCCCCccccccchhhhhhhhcCCCCC
Confidence 9999999998754221111 1123457899999998742 224678999999999999999999999
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ....+..........++...++.+++||.+||+.||++|| +++++++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 208 TLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 532 1222222222223345556778999999999999999999 88999998
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=294.29 Aligned_cols=194 Identities=19% Similarity=0.208 Sum_probs=159.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+. |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 53 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~ 132 (325)
T cd05604 53 VKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ 132 (325)
T ss_pred CCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++....... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 133 ~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 133 GHVVLTDFGLCKEGIAQSD-------TTTTFCGTPEYLAPEVIR----------KQPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CCEEEeecCCcccCCCCCC-------CcccccCChhhCCHHHHc----------CCCCCCcCccccccceehhhhcCCCC
Confidence 9999999999874321111 112446789999999875 34578899999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
|..................+....+..+.++|.+||+.||.+||++ .++++|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 196 FYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred CCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 9765443332222222222333456789999999999999999987 467766
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-27 Score=250.19 Aligned_cols=290 Identities=16% Similarity=0.239 Sum_probs=230.6
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I 1130 (1472)
+-.+.+|++.|+.+.|+|+|.+||||+.|..|.+|++...+++ -.+..+|.+.|..+.|..+++.+++||.|.+|
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-----~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-----FWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-----eeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 4457799999999999999999999999999999997654433 23455899999999999999999999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
+.||+++.. .+++.. .|...++.+. |...+..++.+++.||++++||+|+...++++++ .-
T Consensus 115 ~~wD~~tG~-------------~~rk~k-~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~---ky 175 (338)
T KOG0265|consen 115 RGWDAETGK-------------RIRKHK-GHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN---KY 175 (338)
T ss_pred EEEecccce-------------eeehhc-cccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhcccc---ce
Confidence 999998522 122222 3556667664 4433346888999999999999999999988865 45
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.+++++|...+..+.+|+-|+.|++||+|.......... |..+|+.+.. +|.+. .+.+-+-|+.+.+||
T Consensus 176 qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsl-s~~gs---------~llsnsMd~tvrvwd 244 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSL-SRYGS---------FLLSNSMDNTVRVWD 244 (338)
T ss_pred eEEEEEecccccceeeccccCceeeeccccCcceEEeec-ccCceeeEEe-ccCCC---------ccccccccceEEEEE
Confidence 689999999999999999999999999999888877664 7789999988 77654 677778899999999
Q ss_pred cCC----CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEE
Q 000470 1291 AEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL 1366 (1472)
Q Consensus 1291 l~t----~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~ll 1366 (1472)
++- ..|+.++..+.... ....-.++|+|++..+
T Consensus 245 ~rp~~p~~R~v~if~g~~hnf-------------------------------------------eknlL~cswsp~~~~i 281 (338)
T KOG0265|consen 245 VRPFAPSQRCVKIFQGHIHNF-------------------------------------------EKNLLKCSWSPNGTKI 281 (338)
T ss_pred ecccCCCCceEEEeecchhhh-------------------------------------------hhhcceeeccCCCCcc
Confidence 873 33466665322100 0023467899999555
Q ss_pred -EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccc
Q 000470 1367 -TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1445 (1472)
Q Consensus 1367 -Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1445 (1472)
+|+.|+.+++||.......+.+. ||.+.
T Consensus 282 ~ags~dr~vyvwd~~~r~~lyklp---------------------------------------------------Gh~gs 310 (338)
T KOG0265|consen 282 TAGSADRFVYVWDTTSRRILYKLP---------------------------------------------------GHYGS 310 (338)
T ss_pred ccccccceEEEeecccccEEEEcC---------------------------------------------------Cccee
Confidence 77779999999987655544443 49999
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEE
Q 000470 1446 ILSLGSVKLNQRLLISSSRDGAIKV 1470 (1472)
Q Consensus 1446 I~~va~~~~~~~~LvS~s~DG~IkV 1470 (1472)
|+.++ |++...+|.||+.|.+|.+
T Consensus 311 vn~~~-Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 311 VNEVD-FHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EEEee-ecCCCcEEEEeccCceeEe
Confidence 99995 9999999999999999875
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=263.02 Aligned_cols=293 Identities=17% Similarity=0.270 Sum_probs=219.6
Q ss_pred ccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCC
Q 000470 1097 RSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1176 (1472)
Q Consensus 1097 ~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s 1176 (1472)
++...+.+|++.|.|+.|+|+|..+|+|+.|-++|+||+++.. ....-..|...|.+++|+||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT--------------p~~t~KgH~~WVlcvawsPD--- 168 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET--------------PLFTCKGHKNWVLCVAWSPD--- 168 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC--------------cceeecCCccEEEEEEECCC---
Confidence 4555678899999999999999999999999999999998521 11223467889999999999
Q ss_pred ceEEEEEeCCCeEEEEeCCCCCcc-ceeecCCCccceEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCcccceEecc
Q 000470 1177 SHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGP-----CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS 1250 (1472)
Q Consensus 1177 ~~~L~~at~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp-----~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~ 1250 (1472)
+..|++|+.||.|++||..+++++ ..|.+ |...|++++|.| ..+.|++++.||.+++||+.-+.++.....
T Consensus 169 gk~iASG~~dg~I~lwdpktg~~~g~~l~g--H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsg- 245 (480)
T KOG0271|consen 169 GKKIASGSKDGSIRLWDPKTGQQIGRALRG--HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG- 245 (480)
T ss_pred cchhhccccCCeEEEecCCCCCcccccccC--cccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEecc-
Confidence 889999999999999999998775 45655 999999999976 457999999999999999999888877664
Q ss_pred ccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC-cc------CCCcccc--cCC
Q 000470 1251 QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT-EM------SDLPWAF--ARP 1321 (1472)
Q Consensus 1251 ~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~-~~------~~~~~~~--~~p 1321 (1472)
|..+|++++| .. ..++++|+.|++|++|+...|.|.+.++.+..--+. .. ..-.+.. ..|
T Consensus 246 HT~~VTCvrw-GG----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~ 314 (480)
T KOG0271|consen 246 HTASVTCVRW-GG----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKP 314 (480)
T ss_pred CccceEEEEE-cC----------CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccC
Confidence 7789999999 32 238999999999999999999988877654321000 00 0000000 000
Q ss_pred C----------CCCCCCcccc--cc--ccccccc--c-------ccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEE
Q 000470 1322 S----------SRSNPKTDLR--RN--VNQKYRV--D-------ELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1322 ~----------~~~~~~~~~~--~~--~~~~~~~--~-------~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
. +......... +. ..+++.+ + .+...++|..-|+.+.|+||+ ++++++-|..|++|
T Consensus 315 ~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW 394 (480)
T KOG0271|consen 315 KSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLW 394 (480)
T ss_pred CChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeee
Confidence 0 0000000000 00 1122222 1 222457889999999999999 56699999999999
Q ss_pred eCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCc
Q 000470 1378 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1457 (1472)
Q Consensus 1378 Dl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1457 (1472)
|..+++-.. .++||-++|+.|| |+.|.+
T Consensus 395 ~g~tGk~la---------------------------------------------------sfRGHv~~VYqva-wsaDsR 422 (480)
T KOG0271|consen 395 DGRTGKFLA---------------------------------------------------SFRGHVAAVYQVA-WSADSR 422 (480)
T ss_pred eCCCcchhh---------------------------------------------------hhhhccceeEEEE-eccCcc
Confidence 988765432 3456999999997 999999
Q ss_pred EEEEEcCCceEEEcC
Q 000470 1458 LLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1458 ~LvS~s~DG~IkVWk 1472 (1472)
+|||||.|.++|||+
T Consensus 423 LlVS~SkDsTLKvw~ 437 (480)
T KOG0271|consen 423 LLVSGSKDSTLKVWD 437 (480)
T ss_pred EEEEcCCCceEEEEE
Confidence 999999999999996
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=275.66 Aligned_cols=295 Identities=17% Similarity=0.255 Sum_probs=235.7
Q ss_pred cceeeeccccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
.+++.++.||+..|+++.|.| .+.+|+|||.|+.|+||++-... +...+|.+|..+|.+++|+.+|..|.++|.
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~-----~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR-----RCLRTFKGHRKPVRDASFNNCGTSFLSASF 278 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc-----ceehhhhcchhhhhhhhccccCCeeeeeec
Confidence 467899999999999999999 88999999999999999997622 366789999999999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|+.|++||+++ |. .....+.+.+..|+.|+|++ .+++++|+.|+.|+.||+|+++.++.+..
T Consensus 279 D~~lKlwDtET-----G~----------~~~~f~~~~~~~cvkf~pd~--~n~fl~G~sd~ki~~wDiRs~kvvqeYd~- 340 (503)
T KOG0282|consen 279 DRFLKLWDTET-----GQ----------VLSRFHLDKVPTCVKFHPDN--QNIFLVGGSDKKIRQWDIRSGKVVQEYDR- 340 (503)
T ss_pred ceeeeeecccc-----ce----------EEEEEecCCCceeeecCCCC--CcEEEEecCCCcEEEEeccchHHHHHHHh-
Confidence 99999999995 21 11223456788999999996 35999999999999999999999988876
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
|.+.|.++.|-++|..+++.+.|+.+++|+.+...+++....+.....-++.. +|.+ +++++=+-++.+
T Consensus 341 -hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~-~P~~---------~~~~aQs~dN~i 409 (503)
T KOG0282|consen 341 -HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTL-HPNG---------KWFAAQSMDNYI 409 (503)
T ss_pred -hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceec-CCCC---------CeehhhccCceE
Confidence 89999999999999999999999999999999988887766554444455555 6654 477777788888
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc--CCceEeccCCCC-
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL--LGIRSLLPLPGG- 1363 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~V~sl~~~p~g- 1363 (1472)
.++.+.-.- + ....+.+.+|. +.-..+.|+|||
T Consensus 410 ~ifs~~~~~-----r---------------------------------------~nkkK~feGh~vaGys~~v~fSpDG~ 445 (503)
T KOG0282|consen 410 AIFSTVPPF-----R---------------------------------------LNKKKRFEGHSVAGYSCQVDFSPDGR 445 (503)
T ss_pred EEEeccccc-----c---------------------------------------cCHhhhhcceeccCceeeEEEcCCCC
Confidence 888754211 0 00011112221 123467899999
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCc
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1443 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1443 (1472)
+|++|.+||++.+||.++-+... .+.+|.
T Consensus 446 ~l~SGdsdG~v~~wdwkt~kl~~---------------------------------------------------~lkah~ 474 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTTKLVS---------------------------------------------------KLKAHD 474 (503)
T ss_pred eEEeecCCccEEEeechhhhhhh---------------------------------------------------ccccCC
Confidence 77799999999999987544321 234588
Q ss_pred cceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000470 1444 DSILSLGSVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1444 d~I~~va~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
..+..+. |++. ..-+||||.||.||+|+
T Consensus 475 ~~ci~v~-wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 475 QPCIGVD-WHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cceEEEE-ecCCCcceeEecccCceeEecC
Confidence 8888884 8886 67799999999999996
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=296.26 Aligned_cols=188 Identities=24% Similarity=0.292 Sum_probs=152.4
Q ss_pred CCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC-
Q 000470 4 TPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN- 80 (1472)
Q Consensus 4 pNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~- 80 (1472)
-|||+++++|...++.|||+|.+..+||++|+.+.+ |+...++.++.||+.||.+||+.||||+||||||||+...+
T Consensus 248 ~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 248 YNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR 327 (586)
T ss_pred eeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc
Confidence 589999999999999999999999999999998754 88999999999999999999999999999999999998765
Q ss_pred -cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 -WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 -~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.+||+|||++.... ..-+ +..-++.|+|||+|+ +.+|+.+.||||||||++||++|.|+
T Consensus 328 ~~vKVIDFGSSc~~~-----q~vy-----tYiQSRfYRAPEVIL----------GlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 328 SRIKVIDFGSSCFES-----QRVY-----TYIQSRFYRAPEVIL----------GLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred CceeEEecccccccC-----Ccce-----eeeeccccccchhhc----------cCCCCCccceeehhhhHHhHhcCccc
Confidence 69999999987541 1111 344567899999987 56899999999999999999999999
Q ss_pred CCchHHHH----H----------------------Hh------------------------------cCCCCC---c---
Q 000470 160 FELSHLLA----Y----------------------RR------------------------------GQYDPS---Q--- 177 (1472)
Q Consensus 160 f~~~~~~~----~----------------------~~------------------------------~~~~~~---~--- 177 (1472)
|.+++... + .. ..+... .
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 96443210 0 00 000000 0
Q ss_pred -ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 178 -HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 178 -~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+....+..+.+||.+||.+||.+|+|+.|+|+|
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0111234578999999999999999999999999
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-26 Score=242.26 Aligned_cols=270 Identities=19% Similarity=0.270 Sum_probs=220.1
Q ss_pred CCCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.-..|. .+|++..+++-..+.||++...||+++||+|+.. .||++|+++...+ +..+|.+|...|+++.|..+|
T Consensus 21 TIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~----Pv~t~e~h~kNVtaVgF~~dg 95 (311)
T KOG0315|consen 21 TIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPN----PVATFEGHTKNVTAVGFQCDG 95 (311)
T ss_pred eeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCC----ceeEEeccCCceEEEEEeecC
Confidence 456899 5799999999888999999999999999998874 6999999986632 678999998899999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+++++||+||+++|||++. +...|. ..+.++|+.+..+|+ +..|++++.+|.|++||++...
T Consensus 96 rWMyTgseDgt~kIWdlR~-------------~~~qR~--~~~~spVn~vvlhpn---QteLis~dqsg~irvWDl~~~~ 157 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRS-------------LSCQRN--YQHNSPVNTVVLHPN---QTELISGDQSGNIRVWDLGENS 157 (311)
T ss_pred eEEEecCCCceEEEEeccC-------------cccchh--ccCCCCcceEEecCC---cceEEeecCCCcEEEEEccCCc
Confidence 9999999999999999983 112222 234578899999998 6689999999999999999887
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc------ccceEeccccCCceeEEeecCCCCCccccC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1272 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~------~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~ 1272 (1472)
+...+-. ...-.|.++.+.|+|..++.+...|.+.+|++-... ++..++. |..-|.++.+ +|+.+
T Consensus 158 c~~~liP-e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~a-h~~~il~C~l-SPd~k------ 228 (311)
T KOG0315|consen 158 CTHELIP-EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQA-HNGHILRCLL-SPDVK------ 228 (311)
T ss_pred cccccCC-CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheec-ccceEEEEEE-CCCCc------
Confidence 7665542 345689999999999999999999999999987643 3333333 5566777777 77654
Q ss_pred CCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcC
Q 000470 1273 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1352 (1472)
Q Consensus 1273 ~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1352 (1472)
++++++.|.+++||+.++. .+..+. ..+|..
T Consensus 229 ---~lat~ssdktv~iwn~~~~-~kle~~---------------------------------------------l~gh~r 259 (311)
T KOG0315|consen 229 ---YLATCSSDKTVKIWNTDDF-FKLELV---------------------------------------------LTGHQR 259 (311)
T ss_pred ---EEEeecCCceEEEEecCCc-eeeEEE---------------------------------------------eecCCc
Confidence 9999999999999999886 222211 023445
Q ss_pred CceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeC
Q 000470 1353 GIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1353 ~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g 1390 (1472)
.++.++|+.+| +|+||+.|+.+|+||+..++......|
T Consensus 260 WvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 260 WVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred eEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 89999999998 888999999999999998887665555
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=287.24 Aligned_cols=193 Identities=24% Similarity=0.257 Sum_probs=153.4
Q ss_pred CCCCCcceeeEEEE-----eCCeEEEEecccCCcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQE-----TDKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~-----~~~~~~lV~Ey~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++. .+...|+||||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|
T Consensus 61 ~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~N 140 (290)
T cd07862 61 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 140 (290)
T ss_pred cCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence 36999999999885 34568999999999999999753 348999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
||++.++.+||+|||+++..... .......+++.|+|||.+. ...++.++||||+||++|||
T Consensus 141 il~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el 202 (290)
T cd07862 141 ILVTSSGQIKLADFGLARIYSFQ--------MALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEM 202 (290)
T ss_pred EEEcCCCCEEEccccceEeccCC--------cccccccccccccChHHHh----------CCCCCCccchHHHHHHHHHH
Confidence 99999999999999998754211 1123445788999999874 33578899999999999999
Q ss_pred HhCCCCCCchHH----HHHHhcCCCC-----------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHL----LAYRRGQYDP-----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~----~~~~~~~~~~-----------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||..... ..+......+ ...+....++.+++||.+||+.||++|||+.
T Consensus 203 ~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 282 (290)
T cd07862 203 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 282 (290)
T ss_pred HcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH
Confidence 999999964322 1111110000 0011123467789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+|+|
T Consensus 283 ~~l~h 287 (290)
T cd07862 283 SALSH 287 (290)
T ss_pred HHhcC
Confidence 99998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=284.43 Aligned_cols=193 Identities=18% Similarity=0.182 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+++..|+||||++ |+|.+++.. ...+++.++..++.|++.||+|||++||+||||||+|||++
T Consensus 57 l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~ 136 (285)
T cd05631 57 VNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD 136 (285)
T ss_pred cCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC
Confidence 579999999999999999999999999 699888754 34589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||++...... .......|+..|+|||.+. +..++.++||||+||++|||++|+
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~--------~~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~ 198 (285)
T cd05631 137 DRGHIRISDLGLAVQIPEG--------ETVRGRVGTVGYMAPEVIN----------NEKYTFSPDWWGLGCLIYEMIQGQ 198 (285)
T ss_pred CCCCEEEeeCCCcEEcCCC--------CeecCCCCCCCccCHhhhc----------CCCCCcccCchhHHHHHHHHHhCC
Confidence 9999999999998754211 0113345789999999875 346788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||.... ...+...........+...++.+.+||.+||+.||++||+ ++++++|
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 199 SPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9996432 1222222222223344556789999999999999999997 8999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=294.01 Aligned_cols=194 Identities=22% Similarity=0.245 Sum_probs=159.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++.+++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~ 133 (330)
T cd05586 54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG 133 (330)
T ss_pred CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence 69999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... .....+|++.|+|||.+.. ...++.++||||+||++|||++|..||
T Consensus 134 ~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DvwslGvil~elltG~~Pf 197 (330)
T cd05586 134 HIALCDFGLSKANLTDNK-------TTNTFCGTTEYLAPEVLLD---------EKGYTKHVDFWSLGVLVFEMCCGWSPF 197 (330)
T ss_pred CEEEecCCcCcCCCCCCC-------CccCccCCccccCHHHHcC---------CCCCCCccceeccccEEEEeccCCCCC
Confidence 999999999875322111 1234568999999998742 224688999999999999999998888
Q ss_pred CchHHHHHHhcCCCCCcccC-CCCCHHHHHHHHHhcccCcCCCC----CHHHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLE-KIPDSGIRKMILHMIQLEPELRF----SAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 211 (1472)
.........+........++ ...++.+++||.+||+.||++|| +++++++|
T Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 198 YAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 76544333222111111122 24578899999999999999998 68999988
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=285.67 Aligned_cols=195 Identities=23% Similarity=0.349 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~-~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+++++.+.+. ....+++..++.++.||+.||.|||+.||+||||||+||+++.+
T Consensus 57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~ 136 (287)
T cd07848 57 LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN 136 (287)
T ss_pred CCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence 57999999999999999999999999975555554 34568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.++....... .......+++.|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~p 200 (287)
T cd07848 137 DVLKLCDFGFARNLSEGSN------ANYTEYVATRWYRSPELLL----------GAPYGKAVDMWSVGCILGELSDGQPL 200 (287)
T ss_pred CcEEEeeccCccccccccc------ccccccccccccCCcHHHc----------CCCCCCchhHHhHHHHHHHHHhCCCC
Confidence 9999999999876422111 1112345788999999874 33578899999999999999999999
Q ss_pred CCchHH----HHHHhcC----------------CC----CC--------cccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 160 FELSHL----LAYRRGQ----------------YD----PS--------QHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 160 f~~~~~----~~~~~~~----------------~~----~~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|..... ..+.... .. +. .......+..+++||.+||++||++|||++|
T Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~ 280 (287)
T cd07848 201 FPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQ 280 (287)
T ss_pred CCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHH
Confidence 964321 1111100 00 00 0011234677999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|+|
T Consensus 281 ~l~h 284 (287)
T cd07848 281 CLNH 284 (287)
T ss_pred HhcC
Confidence 9998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=291.23 Aligned_cols=191 Identities=21% Similarity=0.210 Sum_probs=159.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 58 ~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 137 (333)
T cd05600 58 TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDAS 137 (333)
T ss_pred CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 479999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++.... ......|++.|+|||.+. +..++.++|||||||++|||++|.+|
T Consensus 138 ~~~kL~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~p 197 (333)
T cd05600 138 GHIKLTDFGLSKGIVT----------YANSVVGSPDYMAPEVLR----------GKGYDFTVDYWSLGCMLYEFLCGFPP 197 (333)
T ss_pred CCEEEEeCcCCccccc----------ccCCcccCccccChhHhc----------CCCCCCccceecchHHHhhhhhCCCC
Confidence 9999999999875421 123456789999999875 33678899999999999999999999
Q ss_pred CCchHHHHH----HhcCCCC-CcccC---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAY----RRGQYDP-SQHLE---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~-~~~l~---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........ ....... .+... ...++++.+||.+||..+|++||+++|+++|
T Consensus 198 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 198 FSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 975543221 1111111 11111 1346789999999999999999999999998
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=289.36 Aligned_cols=193 Identities=19% Similarity=0.208 Sum_probs=157.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++++++....|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~ 133 (327)
T cd05617 54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG 133 (327)
T ss_pred CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC
Confidence 69999999999999999999999998 69999998777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++....... ...+.+|++.|+|||.+. +..++.++|||||||++|||++|.+||
T Consensus 134 ~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~ell~g~~pf 196 (327)
T cd05617 134 HIKLTDYGMCKEGLGPGD-------TTSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPF 196 (327)
T ss_pred CEEEeccccceeccCCCC-------ceecccCCcccCCHHHHC----------CCCCCchheeehhHHHHHHHHhCCCCC
Confidence 999999998874322111 123456889999999875 346788999999999999999999999
Q ss_pred Cch-------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHH
Q 000470 161 ELS-------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 211 (1472)
Q Consensus 161 ~~~-------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 211 (1472)
... ...............++...+..+.++|.+||+.||++|++ ++++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 197 DIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 521 11111111111222355566788999999999999999998 4688887
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=282.27 Aligned_cols=196 Identities=16% Similarity=0.027 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEe----CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~----~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNI 74 (1472)
++||||+++++++.+ ....|+||||++ |+|.+++..++.+++..+..++.|++.||.|||+ .+++||||||+||
T Consensus 75 l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~ni 154 (283)
T PHA02988 75 IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSF 154 (283)
T ss_pred cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhE
Confidence 589999999999877 347899999999 6999999988889999999999999999999998 5999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++....+. ....++..|+|||.+... ...++.++|||||||++|||+
T Consensus 155 ll~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~--------~~~~~~k~Di~SlGvil~el~ 216 (283)
T PHA02988 155 LVTENYKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDI--------FSEYTIKDDIYSLGVVLWEIF 216 (283)
T ss_pred EECCCCcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhc--------cccccchhhhhHHHHHHHHHH
Confidence 99999999999999987542110 123467889999987521 246889999999999999999
Q ss_pred hCCCCCCchHHHHHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 155 LEVPFFELSHLLAYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+|+.||............ ......++...++.+++|+.+||+.||++|||+.|+++.+..
T Consensus 217 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 217 TGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred HCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 999999755433221111 112223444467889999999999999999999999988653
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=289.30 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=158.1
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
|++|+++++++.++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.+|.
T Consensus 60 ~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~ 139 (324)
T cd05587 60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH 139 (324)
T ss_pred CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC
Confidence 3568889999999999999999999 699999988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
++|+|||+++....... ......|++.|+|||.+. +..++.++||||+||++|||++|++||.
T Consensus 140 ~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~ 202 (324)
T cd05587 140 IKIADFGMCKENIFGGK-------TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFD 202 (324)
T ss_pred EEEeecCcceecCCCCC-------ceeeecCCccccChhhhc----------CCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 99999998864321111 123446789999999875 3457889999999999999999999997
Q ss_pred chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 162 LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
.................++...++.+.++|.+||..||.+|+++ +++++|
T Consensus 203 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 203 GEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 55433332222222334555677899999999999999999976 788877
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=295.83 Aligned_cols=200 Identities=20% Similarity=0.260 Sum_probs=159.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ ++|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~ 137 (350)
T cd05573 58 ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDAD 137 (350)
T ss_pred cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC----------------------CCCceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDP----------------------SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~----------------------~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
+.+||+|||+++......... ...........|++.|+|||.+. +..+
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~ 207 (350)
T cd05573 138 GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR----------GTPY 207 (350)
T ss_pred CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc----------CCCC
Confidence 999999999987654322000 00011123456789999999875 3367
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCCC--CCcccCC--CCCHHHHHHHHHhcccCcCCCCC-HHHHHHH
Q 000470 138 KPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHLEK--IPDSGIRKMILHMIQLEPELRFS-AESYLQN 211 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 211 (1472)
+.++|||||||++|||++|++||.............. ....++. ..++.+++||.+||. ||.+|++ ++|+++|
T Consensus 208 ~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 208 GLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 8999999999999999999999865543222111111 1111222 247889999999997 9999999 9999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=289.91 Aligned_cols=193 Identities=17% Similarity=0.157 Sum_probs=159.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||+|+++++++++++..|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.++
T Consensus 59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~ 138 (323)
T cd05616 59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.+||+|||+++...... .......|++.|+|||.+. ...++.++|||||||++|||++|++||
T Consensus 139 ~~kL~DfG~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~Pf 201 (323)
T cd05616 139 HIKIADFGMCKENMWDG-------VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQAPF 201 (323)
T ss_pred cEEEccCCCceecCCCC-------CccccCCCChhhcCHHHhc----------CCCCCCccchhchhHHHHHHHhCCCCC
Confidence 99999999987432111 1123456789999999875 346789999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
..................++...+.++++|+.+||+.||++|+++ .++++|
T Consensus 202 ~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 202 EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 765443332222222233455667899999999999999999984 777776
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=293.75 Aligned_cols=200 Identities=18% Similarity=0.183 Sum_probs=158.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~ 137 (364)
T cd05599 58 ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAK 137 (364)
T ss_pred CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence 579999999999999999999999998 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCC-------------------------------ceeeccCCCCccccCcccccccCCc
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDF-------------------------------SFFFDTGGKRLCYLAPERFYEHGGE 128 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~-------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~ 128 (1472)
|.++|+|||+++............ .....+..||+.|+|||++.
T Consensus 138 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----- 212 (364)
T cd05599 138 GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL----- 212 (364)
T ss_pred CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc-----
Confidence 999999999987542211100000 00111345899999999875
Q ss_pred cccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 129 MQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 129 ~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
...++.++|||||||++|||++|.+||........ ...............++.+++||.+||. +|.+|++
T Consensus 213 -----~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 213 -----QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred -----CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 33578899999999999999999999975443222 1111111111112356789999999996 9999998
Q ss_pred ---HHHHHHH
Q 000470 205 ---AESYLQN 211 (1472)
Q Consensus 205 ---a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~~~~~ll~h 296 (364)
T cd05599 287 NNGVNEIKSH 296 (364)
T ss_pred CCCHHHHhcC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=295.00 Aligned_cols=203 Identities=20% Similarity=0.157 Sum_probs=159.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|+||||+++++++..+...|++|||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 143 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~ 222 (392)
T PHA03207 143 ISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE 222 (392)
T ss_pred cCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence 68999999999999999999999999999999997777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........+ ......|++.|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 223 ~~~l~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 223 NAVLGDFGAACKLDAHPDTP-----QCYGWSGTLETNSPELLA----------LDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred CEEEccCccccccCcccccc-----cccccccccCccCHhHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999987553221111 112345789999999875 346788999999999999999997777
Q ss_pred CchH-------HHHHHhc-----------------------CC--CCCcccC-----CCCCHHHHHHHHHhcccCcCCCC
Q 000470 161 ELSH-------LLAYRRG-----------------------QY--DPSQHLE-----KIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 161 ~~~~-------~~~~~~~-----------------------~~--~~~~~l~-----~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
.... +..+.+. .. .+....+ ...+.+++++|.+||..||++||
T Consensus 288 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp 367 (392)
T PHA03207 288 FGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP 367 (392)
T ss_pred CCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC
Confidence 4221 1111110 00 0000011 12356789999999999999999
Q ss_pred CHHHHHHHhhcccCC
Q 000470 204 SAESYLQNYAAVVFP 218 (1472)
Q Consensus 204 sa~elL~~~~~~~fp 218 (1472)
++.|+|.|.+....|
T Consensus 368 sa~e~l~~p~f~~~~ 382 (392)
T PHA03207 368 SAQDILSLPLFTKEP 382 (392)
T ss_pred CHHHHhhCchhhccc
Confidence 999999994333333
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=284.85 Aligned_cols=297 Identities=21% Similarity=0.325 Sum_probs=239.1
Q ss_pred cceeeecccc-ccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEH-CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H-~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
-.+...+..| ..+|+++.|+++|+++++++.|+.+++|+...... .......+|...|.+++|+|++..+++|+.
T Consensus 148 ~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~----~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~ 223 (456)
T KOG0266|consen 148 FSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS----NLLRELSGHTRGVSDVAFSPDGSYLLSGSD 223 (456)
T ss_pred ceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc----hhhccccccccceeeeEECCCCcEEEEecC
Confidence 3357777776 68999999999999999999999999999965442 122334678888999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|++|++||+.... ...+....|...+.+++|+|. ++.+++|+.|++|++||++++++...+..
T Consensus 224 D~tiriwd~~~~~-------------~~~~~l~gH~~~v~~~~f~p~---g~~i~Sgs~D~tvriWd~~~~~~~~~l~~- 286 (456)
T KOG0266|consen 224 DKTLRIWDLKDDG-------------RNLKTLKGHSTYVTSVAFSPD---GNLLVSGSDDGTVRIWDVRTGECVRKLKG- 286 (456)
T ss_pred CceEEEeeccCCC-------------eEEEEecCCCCceEEEEecCC---CCEEEEecCCCcEEEEeccCCeEEEeeec-
Confidence 9999999994210 122233367777899999999 67999999999999999999999999987
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--ccceEeccccC-CceeEEeecCCCCCccccCCCCEEEEEEcC
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1283 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~--~i~s~~~~~~~-~I~~l~~~~p~~~~~~~~~~~~~l~vas~d 1283 (1472)
|.+.|++++|+++++.|++++.||.|++||+..+. +++........ +++.+.| +|++. ++++++.|
T Consensus 287 -hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~f-sp~~~---------~ll~~~~d 355 (456)
T KOG0266|consen 287 -HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQF-SPNGK---------YLLSASLD 355 (456)
T ss_pred -cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEE-CCCCc---------EEEEecCC
Confidence 89999999999999999999999999999999998 55555544433 6788888 77655 89999999
Q ss_pred CeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC
Q 000470 1284 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1363 (1472)
Q Consensus 1284 g~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g 1363 (1472)
+.+.+||+..+.+...+..+... ...+.+....++|
T Consensus 356 ~~~~~w~l~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~ 391 (456)
T KOG0266|consen 356 RTLKLWDLRSGKSVGTYTGHSNL--------------------------------------------VRCIFSPTLSTGG 391 (456)
T ss_pred CeEEEEEccCCcceeeecccCCc--------------------------------------------ceeEecccccCCC
Confidence 99999999999988887643320 0022333334566
Q ss_pred -cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCC
Q 000470 1364 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1442 (1472)
Q Consensus 1364 -~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1442 (1472)
++++|+.|+.|++||+.++.....+. +|
T Consensus 392 ~~i~sg~~d~~v~~~~~~s~~~~~~l~---------------------------------------------------~h 420 (456)
T KOG0266|consen 392 KLIYSGSEDGSVYVWDSSSGGILQRLE---------------------------------------------------GH 420 (456)
T ss_pred CeEEEEeCCceEEEEeCCccchhhhhc---------------------------------------------------CC
Confidence 77799999999999998755433222 37
Q ss_pred -ccceeEEeeeecCCcEEEEEc--CCceEEEcC
Q 000470 1443 -RDSILSLGSVKLNQRLLISSS--RDGAIKVWK 1472 (1472)
Q Consensus 1443 -~d~I~~va~~~~~~~~LvS~s--~DG~IkVWk 1472 (1472)
...|.+++ +++...++++++ .|+.|++|+
T Consensus 421 ~~~~~~~~~-~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 421 SKAAVSDLS-SHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred CCCceeccc-cCCCcCeeeecCcCCCceEEEec
Confidence 77888885 899999999998 799999996
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=265.42 Aligned_cols=198 Identities=23% Similarity=0.291 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccCCcHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
|.||||+.+..+|.+ ++.+||++||.+.+|++.|+- ...++...++.|++||+.|+.|||++=|+||||||.||
T Consensus 84 l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNI 163 (438)
T KOG0666|consen 84 LKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANI 163 (438)
T ss_pred hcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceE
Confidence 589999999999977 899999999999999999953 23589999999999999999999999999999999999
Q ss_pred EEccC----CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 75 LVTSW----NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 75 Lv~~~----~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
||..+ |.|||+|||+++.+..|...- +-.+...-|.+|+|||.+.+. ..||++.|||+.|||+
T Consensus 164 lvmgdgperG~VKIaDlGlaR~~~~plkpl----~s~d~VVVTiWYRAPELLLGa---------~hYT~AiDvWAiGCIf 230 (438)
T KOG0666|consen 164 LVMGDGPERGRVKIADLGLARLFNNPLKPL----ASLDPVVVTIWYRAPELLLGA---------RHYTKAIDVWAIGCIF 230 (438)
T ss_pred EEeccCCccCeeEeecccHHHHhhcccccc----ccCCceEEEEEecChHHhccc---------ccccchhhhHHHHHHH
Confidence 99988 899999999999876554322 223445568999999998743 4789999999999999
Q ss_pred HHHHhCCCCCCch-------------HHHHHHh----------------------------cCCCCC-----cccCCCCC
Q 000470 151 AELFLEVPFFELS-------------HLLAYRR----------------------------GQYDPS-----QHLEKIPD 184 (1472)
Q Consensus 151 ~eLltg~~pf~~~-------------~~~~~~~----------------------------~~~~~~-----~~l~~~~~ 184 (1472)
+||++-+|.|.+. ++..+.. ..+... ....++.+
T Consensus 231 aElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~ 310 (438)
T KOG0666|consen 231 AELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD 310 (438)
T ss_pred HHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence 9999988877432 2222111 111110 01122345
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 185 SGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 185 ~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+...+|+.+||.+||.+|+|++|+|+|
T Consensus 311 ~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 311 PSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred chHHHHHHHHhccCchhhccHHHHhcc
Confidence 568899999999999999999999999
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=292.22 Aligned_cols=198 Identities=18% Similarity=0.200 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~ 178 (370)
T cd05596 100 ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 178 (370)
T ss_pred CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCC
Confidence 579999999999999999999999998 6999998765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.++...... .....+..|++.|+|||.+.... ....++.++|||||||++|||++|.+|
T Consensus 179 ~~~kL~DfG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~~DiwSlGvilyelltG~~P 246 (370)
T cd05596 179 GHLKLADFGTCMKMDANG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTP 246 (370)
T ss_pred CCEEEEeccceeeccCCC------cccCCCCCCCcCeECHHHhccCC------CCCCCCCceeeeehhHHHHHHHhCCCC
Confidence 999999999987542111 11123456899999999886321 133578999999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..+++||.+||+.+|++ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 247 FYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 97654322 2222211111112245788999999999999988 9999999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=285.77 Aligned_cols=192 Identities=17% Similarity=0.126 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~ 139 (331)
T cd06649 60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS 139 (331)
T ss_pred CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC
Confidence 589999999999999999999999999 59999998877899999999999999999999986 6999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||+++..... ......|++.|+|||.+. +..++.++|||||||++|||++|+.
T Consensus 140 ~~~~kl~Dfg~~~~~~~~---------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~ 200 (331)
T cd06649 140 RGEIKLCDFGVSGQLIDS---------MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVELAIGRY 200 (331)
T ss_pred CCcEEEccCccccccccc---------ccccCCCCcCcCCHhHhc----------CCCCCchHhHHHHHHHHHHHHhCCC
Confidence 999999999988754211 112345788999999774 3467889999999999999999999
Q ss_pred CCCchHHHHHHhcCC-----------------------------------------------CCCccc-CCCCCHHHHHH
Q 000470 159 FFELSHLLAYRRGQY-----------------------------------------------DPSQHL-EKIPDSGIRKM 190 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~-----------------------------------------------~~~~~l-~~~~~~~l~~L 190 (1472)
||.......+..... ...+.. ....++++++|
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 280 (331)
T cd06649 201 PIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEF 280 (331)
T ss_pred CCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHH
Confidence 986433222211000 000001 11346789999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 000470 191 ILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 191 I~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||++||++||+++|+++|
T Consensus 281 i~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 281 VNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHccCCcccCCCHHHHhcC
Confidence 999999999999999999998
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=288.95 Aligned_cols=200 Identities=21% Similarity=0.225 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 ~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~ 137 (363)
T cd05628 58 ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK 137 (363)
T ss_pred CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC
Confidence 579999999999999999999999999 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC----------CCCCc------------------eeeccCCCCccccCcccccccCCcccc
Q 000470 80 NWLYLSDFASFKPTYIPYDD----------PSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQV 131 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~----------~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~ 131 (1472)
+.+||+|||+++........ +.++. ....+.+||+.|+|||++.
T Consensus 138 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-------- 209 (363)
T cd05628 138 GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM-------- 209 (363)
T ss_pred CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc--------
Confidence 99999999998754211100 00000 0012346899999999875
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCC--CCCcccCC--CCCHHHHHHHHHhcccCcC---CCCC
Q 000470 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY--DPSQHLEK--IPDSGIRKMILHMIQLEPE---LRFS 204 (1472)
Q Consensus 132 ~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~--~~~~~l~~--~~~~~l~~LI~~mL~~dP~---~Rps 204 (1472)
+..++.++|||||||++|||++|.+||............. .....++. ..++++++||.+|+. +|+ .||+
T Consensus 210 --~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~ 286 (363)
T cd05628 210 --QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG 286 (363)
T ss_pred --CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence 3467889999999999999999999997544332211111 11111121 246789999999875 455 4589
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~ei~~h 293 (363)
T cd05628 287 VEEIKTN 293 (363)
T ss_pred HHHHhCC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-28 Score=285.30 Aligned_cols=198 Identities=22% Similarity=0.292 Sum_probs=150.2
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccCCcHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFFNSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.. +...|++|||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||
T Consensus 55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDl 134 (317)
T cd07868 55 LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL 134 (317)
T ss_pred cCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence 589999999999854 5678999999999999987531 24899999999999999999999999999999
Q ss_pred CCCCEEE----ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 70 KCENVLV----TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 70 KpeNILv----~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||+|||+ +..+.+||+|||+++....+... ........+++.|+|||.+.. ...++.++||||
T Consensus 135 kp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~Diws 201 (317)
T cd07868 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKP----LADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWA 201 (317)
T ss_pred CHHHEEEecCCCCcCcEEEeecCceeccCCCCcc----ccccCCccccccccCCHHHcC---------CCCcCchhhHHH
Confidence 9999999 45578999999998755322111 111234567899999998752 235788999999
Q ss_pred HHHHHHHHHhCCCCCCchH-------------HHHHHhc----------------------------CCCCCc------c
Q 000470 146 VGCVIAELFLEVPFFELSH-------------LLAYRRG----------------------------QYDPSQ------H 178 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~-------------~~~~~~~----------------------------~~~~~~------~ 178 (1472)
+||++|||++|++||...+ +..+... ...... .
T Consensus 202 lG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (317)
T cd07868 202 IGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 281 (317)
T ss_pred HHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHh
Confidence 9999999999999985321 1111000 000000 0
Q ss_pred cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 179 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 179 l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.....+..+.+||.+||+.||++|||++|+|+|
T Consensus 282 ~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 282 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred cCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011234578999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=287.58 Aligned_cols=196 Identities=15% Similarity=0.190 Sum_probs=153.9
Q ss_pred CCCCcceeeEEEEeC-CeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQETD-KAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
+||||+++++++... ..+|+||||++ |+|.+++...
T Consensus 69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (338)
T cd05102 69 NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSR 148 (338)
T ss_pred cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccc
Confidence 799999999988764 46899999999 7999998642
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCC
Q 000470 38 --------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 97 (1472)
Q Consensus 38 --------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~ 97 (1472)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~ 228 (338)
T cd05102 149 FQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 228 (338)
T ss_pred cccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCc
Confidence 237788899999999999999999999999999999999999999999999987542111
Q ss_pred CCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchHH----HHHHhcC
Q 000470 98 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAYRRGQ 172 (1472)
Q Consensus 98 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~~~~~ 172 (1472)
. .....+..+++.|+|||.+. +..++.++|||||||++|||++ |.+||..... .......
T Consensus 229 ~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 293 (338)
T cd05102 229 D-----YVRKGSARLPLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG 293 (338)
T ss_pred c-----hhcccCCCCCccccCcHHhh----------cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcC
Confidence 0 01112334567899999774 3467889999999999999997 8999975321 1111111
Q ss_pred CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 173 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 173 ~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.....+...++.+++|+.+||+.||++||++.|+++.++.
T Consensus 294 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 294 --TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1122345667889999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=278.57 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=158.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...|+||||++ |+|.+++. ..+.+++.+++.++.||+.||+|||++||+||||||+||+
T Consensus 50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 129 (280)
T cd05608 50 VHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVL 129 (280)
T ss_pred CCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 579999999999999999999999999 69988774 2356899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.++....... ......|++.|+|||.+. +..++.++||||+||++|||++
T Consensus 130 i~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 130 LDNDGNVRISDLGLAVELKDGQS-------KTKGYAGTPGFMAPELLQ----------GEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred ECCCCCEEEeeCccceecCCCCc-------cccccCCCcCccCHHHhc----------CCCCCccccHHHHHHHHHHHHh
Confidence 99999999999999875422111 112345788999999875 3467889999999999999999
Q ss_pred CCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 156 EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|+.||.... ...............+...++.+++++.+||+.||++|| +++++++|
T Consensus 193 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 193 ARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 999996432 122222222223334455678899999999999999999 88999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=302.90 Aligned_cols=203 Identities=24% Similarity=0.241 Sum_probs=164.1
Q ss_pred CCCCcceeeE-EEEeC------CeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCC
Q 000470 2 SSTPCVHKKF-WQETD------KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDI 69 (1472)
Q Consensus 2 ~HpNIv~~~~-~~~~~------~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~DL 69 (1472)
+|||||.|++ ..... ..++|.||||+ |.|.|++.+| ..|++.|+..|++|+++|+.+||..+ ||||||
T Consensus 93 gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDL 172 (738)
T KOG1989|consen 93 GHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDL 172 (738)
T ss_pred CCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhh
Confidence 6999999999 33221 25789999999 6999999853 45999999999999999999999998 999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeec--cCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|-||||++.+|..||||||++.....+.....+..+.-+ ..--|+.|+|||++. +..+.++++|+|||+||
T Consensus 173 KiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID-------lysg~pI~eKsDIWALG 245 (738)
T KOG1989|consen 173 KIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID-------LYSGLPIGEKSDIWALG 245 (738)
T ss_pred hhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh-------hhcCCCCcchhHHHHHH
Confidence 999999999999999999998654433322222221111 112388999999986 34567899999999999
Q ss_pred HHHHHHHhCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 148 CVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|+||-|+....||+......+..+.|...+. ...+..+++||+.||+.||++||++.|++.++.
T Consensus 246 clLYkLCy~t~PFe~sg~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 246 CLLYKLCYFTTPFEESGKLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred HHHHHHHHhCCCcCcCcceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 9999999999999988666777777764432 345578999999999999999999999998853
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=287.27 Aligned_cols=187 Identities=22% Similarity=0.317 Sum_probs=157.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv-~~~ 79 (1472)
+||||+++++.++++.+.|+|||++.| -|.+++...+... .++..|+.||+.|+.|||++||+||||||+|||+ ++.
T Consensus 374 ~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~ 452 (612)
T KOG0603|consen 374 DHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA 452 (612)
T ss_pred CCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC
Confidence 699999999999999999999999994 7888887776555 8888999999999999999999999999999999 588
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|+++|+|||.++..... ..+.+-|..|.|||++. ...|++++||||||++||+|++|+.|
T Consensus 453 g~lrltyFG~a~~~~~~----------~~tp~~t~~y~APEvl~----------~~~yt~acD~WSLGvlLy~ML~G~tp 512 (612)
T KOG0603|consen 453 GHLRLTYFGFWSELERS----------CDTPALTLQYVAPEVLA----------IQEYTEACDWWSLGVLLYEMLTGRTL 512 (612)
T ss_pred CcEEEEEechhhhCchh----------hcccchhhcccChhhhc----------cCCCCcchhhHHHHHHHHHHHhCCCc
Confidence 99999999998865211 34556688899999764 45799999999999999999999999
Q ss_pred CCchHH-HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....- .++......+. .....+..+++||.+||+.||.+|+++.+++.|
T Consensus 513 ~~~~P~~~ei~~~i~~~~--~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 513 FAAHPAGIEIHTRIQMPK--FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cccCCchHHHHHhhcCCc--cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 964322 23333222222 226678899999999999999999999999998
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=284.55 Aligned_cols=193 Identities=17% Similarity=0.167 Sum_probs=157.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||+|++++.+++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~ 138 (323)
T cd05615 59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 46788899999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++....... ......|++.|+|||.+. ...++.++||||+||++|||++|.+||
T Consensus 139 ~ikL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf 201 (323)
T cd05615 139 HIKIADFGMCKEHMVDGV-------TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAYGVLLYEMLAGQPPF 201 (323)
T ss_pred CEEEeccccccccCCCCc-------cccCccCCccccCHHHHc----------CCCCCCccchhhhHHHHHHHHhCCCCC
Confidence 999999999875322111 123445789999999774 335788999999999999999999999
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
...................+...+..+++++.+||++||.+|+++ +++++|
T Consensus 202 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 202 DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred CCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 765433322222222223455567889999999999999999974 566665
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=289.64 Aligned_cols=191 Identities=23% Similarity=0.339 Sum_probs=150.9
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+||
T Consensus 73 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Ni 150 (355)
T cd07874 73 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150 (355)
T ss_pred hCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHE
Confidence 5799999999988654 35799999999999988865 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .......+++.|+|||.+. +..++.++|||||||++|+|+
T Consensus 151 ll~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~ 212 (355)
T cd07874 151 VVKSDCTLKILDFGLARTAGTS--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMV 212 (355)
T ss_pred EECCCCCEEEeeCcccccCCCc--------cccCCccccCCccCHHHHc----------CCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999998754211 1123445788999999874 335788999999999999999
Q ss_pred hCCCCCCchHHHHH--------------------------HhcC--C--------------CCCcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLLAY--------------------------RRGQ--Y--------------DPSQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~~~--------------------------~~~~--~--------------~~~~~l~~~~~~~l~~LI~ 192 (1472)
+|+.||........ .... + ..........+..+++||.
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 292 (355)
T cd07874 213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292 (355)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHH
Confidence 99999964331110 0000 0 0000111223467899999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||++|||++|+|+|
T Consensus 293 ~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 293 KMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhcCCchhcCCHHHHhcC
Confidence 9999999999999999999
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=277.54 Aligned_cols=199 Identities=14% Similarity=0.101 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++..++..|++|||++ ++|.+++... ..+++.++..++.||+.||.|||++|
T Consensus 65 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~ 144 (283)
T cd05048 65 LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH 144 (283)
T ss_pred cCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999 6999999653 45788999999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+||++++++.++|+|||+++...... .........+++.|+|||.+. ...++.++||
T Consensus 145 i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDv 209 (283)
T cd05048 145 FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAIL----------YGKFTTESDI 209 (283)
T ss_pred eeccccccceEEEcCCCcEEECCCcceeeccccc-----cccccCCCcccccccCHHHhc----------cCcCchhhhH
Confidence 9999999999999999999999999987653221 111123334577899999764 3357889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|||||++|||++ |.+||............ .......+...++++.+|+.+||+.||++||++.|++++++.
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 999999999998 88777543322222111 111122344567899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=291.59 Aligned_cols=200 Identities=19% Similarity=0.203 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+.++...|+||||++ |+|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 ~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~ 137 (382)
T cd05625 58 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 137 (382)
T ss_pred CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC------------CC----------------------------CceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDDP------------SD----------------------------FSFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~------------~~----------------------------~~~~~~~~~gt~~Y~AP 119 (1472)
|.+||+|||++.......... .. ......+.+||+.|+||
T Consensus 138 g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 217 (382)
T cd05625 138 GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAP 217 (382)
T ss_pred CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCH
Confidence 999999999875321100000 00 00001234689999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL 195 (1472)
|++. +..++.++||||+||++|||++|++||....... ................++++.++|.+|+
T Consensus 218 E~~~----------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~ 287 (382)
T cd05625 218 EVLL----------RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC 287 (382)
T ss_pred HHhc----------CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc
Confidence 9875 3357889999999999999999999997543222 2211111111112345678999999987
Q ss_pred ccCcCCCCC---HHHHHHH
Q 000470 196 QLEPELRFS---AESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rps---a~elL~~ 211 (1472)
.+|++|++ ++|+++|
T Consensus 288 -~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 288 -RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred -cCHhHcCCCCCHHHHhcC
Confidence 59999997 9999988
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=293.95 Aligned_cols=194 Identities=23% Similarity=0.295 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++... ..+|+||||++++|.+++. ....+++..++.++.||+.||+|||++||+|||
T Consensus 116 l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrD 195 (440)
T PTZ00036 116 LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRD 195 (440)
T ss_pred cCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 5899999999887432 2578999999999888774 345699999999999999999999999999999
Q ss_pred CCCCCEEEccCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 69 IKCENVLVTSWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 69 LKpeNILv~~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|||+|||++..+ .+||+|||+++....... .....+++.|+|||++.+ ...++.++||||||
T Consensus 196 LKp~NILl~~~~~~vkL~DFGla~~~~~~~~--------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlG 258 (440)
T PTZ00036 196 LKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR--------SVSYICSRFYRAPELMLG---------ATNYTTHIDLWSLG 258 (440)
T ss_pred cCHHHEEEcCCCCceeeeccccchhccCCCC--------cccCCCCcCccCHHHhcC---------CCCCCcHHHHHHHH
Confidence 999999999665 699999999985532111 112356888999998742 23578899999999
Q ss_pred HHHHHHHhCCCCCCchH----HHHHHhcC--------------C-----CC------CcccCCCCCHHHHHHHHHhcccC
Q 000470 148 CVIAELFLEVPFFELSH----LLAYRRGQ--------------Y-----DP------SQHLEKIPDSGIRKMILHMIQLE 198 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~----~~~~~~~~--------------~-----~~------~~~l~~~~~~~l~~LI~~mL~~d 198 (1472)
|++|||++|.+||.... +..+.+.. + .. ...++...++++++||.+||++|
T Consensus 259 vil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d 338 (440)
T PTZ00036 259 CIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE 338 (440)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC
Confidence 99999999999996532 11111100 0 00 00122334678999999999999
Q ss_pred cCCCCCHHHHHHH
Q 000470 199 PELRFSAESYLQN 211 (1472)
Q Consensus 199 P~~Rpsa~elL~~ 211 (1472)
|.+|||+.|+|+|
T Consensus 339 P~~R~ta~e~l~h 351 (440)
T PTZ00036 339 PLKRLNPIEALAD 351 (440)
T ss_pred hhHCcCHHHHhCC
Confidence 9999999999998
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=283.09 Aligned_cols=195 Identities=22% Similarity=0.362 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|+||||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 61 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~ 140 (309)
T cd07872 61 LKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 140 (309)
T ss_pred CCCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 5799999999999999999999999999999998764 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....+.. ......+++.|+|||.+.. ...++.++||||+||++|||++|++|
T Consensus 141 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~tg~~p 204 (309)
T cd07872 141 GELKLADFGLARAKSVPTK-------TYSNEVVTLWYRPPDVLLG---------SSEYSTQIDMWGVGCIFFEMASGRPL 204 (309)
T ss_pred CCEEECccccceecCCCcc-------ccccccccccccCCHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123456788999998742 23578899999999999999999999
Q ss_pred CCchHHHH----HHhc---------------------CCC---CCc--ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRG---------------------QYD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~---------------------~~~---~~~--~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... +.+. .+. +.. ......++++++||.+||+.||.+|||++|++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 205 FPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 96433211 1110 000 000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 285 ~h 286 (309)
T cd07872 285 KH 286 (309)
T ss_pred cC
Confidence 88
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=289.13 Aligned_cols=198 Identities=20% Similarity=0.198 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~ 178 (370)
T cd05621 100 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 178 (370)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++...... .....+..||+.|+|||++.... ....++.++||||+||++|||++|.+|
T Consensus 179 ~~~kL~DFG~a~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~~~~~DiwSlG~ilyell~G~~P 246 (370)
T cd05621 179 GHLKLADFGTCMKMDETG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLFEMLVGDTP 246 (370)
T ss_pred CCEEEEecccceecccCC------ceecccCCCCcccCCHHHHhccC------CCCCCCcccCEEeehHHHHHHHhCCCC
Confidence 999999999987642111 11124567899999999886331 123478899999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..++++|.+||..++.+ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 247 FYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 97554322 2221111111111234678999999999865543 8899999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=290.64 Aligned_cols=200 Identities=20% Similarity=0.218 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++.....+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~ 137 (377)
T cd05629 58 SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRG 137 (377)
T ss_pred CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence 589999999999999999999999998 6999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC----------CCC----C--------------------------ceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDD----------PSD----F--------------------------SFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~----------~~~----~--------------------------~~~~~~~~gt~~Y~AP 119 (1472)
+.++|+|||+++........ ... . ........||+.|+||
T Consensus 138 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 217 (377)
T cd05629 138 GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAP 217 (377)
T ss_pred CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCH
Confidence 99999999998633111000 000 0 0000124589999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH-HHhcC-CCCCcccCC--CCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQ-YDPSQHLEK--IPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~-~~~~~~l~~--~~~~~l~~LI~~mL 195 (1472)
|.+. +..++.++|||||||++|||++|.+||....... +.... ......++. ..+.++++||.+||
T Consensus 218 E~~~----------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL 287 (377)
T cd05629 218 EIFL----------QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLI 287 (377)
T ss_pred HHHc----------cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHh
Confidence 9874 3357889999999999999999999996543322 11111 111111222 35678999999999
Q ss_pred ccCcCCC---CCHHHHHHH
Q 000470 196 QLEPELR---FSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~R---psa~elL~~ 211 (1472)
. +|.+| +++.|+++|
T Consensus 288 ~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 288 T-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred c-CHhhcCCCCCHHHHhcC
Confidence 7 77775 599999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=279.64 Aligned_cols=193 Identities=26% Similarity=0.274 Sum_probs=152.2
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccCCcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++.. ....|++|||+.++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|
T Consensus 59 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N 138 (288)
T cd07863 59 FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 138 (288)
T ss_pred cCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 379999999998865 3468999999999999998763 348999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
||++.++.+||+|||+++...... ......++..|+|||.+. +..++.++||||+||++|||
T Consensus 139 ili~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l 200 (288)
T cd07863 139 ILVTSGGQVKLADFGLARIYSCQM--------ALTPVVVTLWYRAPEVLL----------QSTYATPVDMWSVGCIFAEM 200 (288)
T ss_pred EEECCCCCEEECccCccccccCcc--------cCCCccccccccCchHhh----------CCCCCCcchhhhHHHHHHHH
Confidence 999999999999999887542111 112345688899999874 33578899999999999999
Q ss_pred HhCCCCCCchHH----HHHHhcC------------------CCC-----CcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHL----LAYRRGQ------------------YDP-----SQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~----~~~~~~~------------------~~~-----~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||..... .++.... +.+ ........++.+++||.+||+.||++|||+.
T Consensus 201 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 280 (288)
T cd07863 201 FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF 280 (288)
T ss_pred HhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH
Confidence 999999954321 1111100 000 0011123456789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 281 ~~l~h 285 (288)
T cd07863 281 RALQH 285 (288)
T ss_pred HHhcC
Confidence 99998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=279.62 Aligned_cols=192 Identities=19% Similarity=0.169 Sum_probs=158.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|+|||++++++..++.+|||||||. |+|.++|+. +..+...+...++.||++|++||+++++|||||...||||+
T Consensus 258 L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~ 337 (468)
T KOG0197|consen 258 LRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD 337 (468)
T ss_pred CcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec
Confidence 689999999999999999999999999 999999987 56799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+++.+||+|||+++... + ..|....+ -...|.|||.|. ...++.++||||||++||||+|
T Consensus 338 ~~~~vKIsDFGLAr~~~---d-----~~Y~~~~~~kfPIkWtAPEa~~----------~~~FS~kSDVWSFGVlL~E~fT 399 (468)
T KOG0197|consen 338 EDLVVKISDFGLARLIG---D-----DEYTASEGGKFPIKWTAPEALN----------YGKFSSKSDVWSFGVLLWELFT 399 (468)
T ss_pred cCceEEEcccccccccC---C-----CceeecCCCCCCceecCHHHHh----------hCCcccccceeehhhhHHHHhc
Confidence 99999999999999431 1 11212222 244599999876 4478999999999999999999
Q ss_pred -CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 156 -EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 156 -g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|+.||..-... +.....+. -.-|..+++.+.+++..||..+|++|||++.+...+
T Consensus 400 ~G~~py~~msn~ev~~~le~GyR--lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 400 YGRVPYPGMSNEEVLELLERGYR--LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred cCCCCCCCCCHHHHHHHHhccCc--CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 58887644332 22222222 224556788999999999999999999999777653
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=291.88 Aligned_cols=196 Identities=25% Similarity=0.257 Sum_probs=153.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+||||+++++++..++..|+|||++.++|++++..+ ..+++.+++.|+.||+.||.|||++||+||||||+|||++..
T Consensus 217 L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~ 296 (461)
T PHA03211 217 LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP 296 (461)
T ss_pred CCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC
Confidence 5899999999999999999999999999999998764 459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-CC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
+.++|+|||+++....... ........||..|+|||++. +..++.++|||||||++|||++| .+
T Consensus 297 ~~vkL~DFGla~~~~~~~~-----~~~~~~~~GT~~Y~APE~~~----------~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 297 EDICLGDFGAACFARGSWS-----TPFHYGIAGTVDTNAPEVLA----------GDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred CCEEEcccCCceecccccc-----cccccccCCCcCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 9999999999875422111 11112346899999999875 34678899999999999999988 45
Q ss_pred CCCch----------HHHHH-HhcCCCC-------------------------C---cccC--CCCCHHHHHHHHHhccc
Q 000470 159 FFELS----------HLLAY-RRGQYDP-------------------------S---QHLE--KIPDSGIRKMILHMIQL 197 (1472)
Q Consensus 159 pf~~~----------~~~~~-~~~~~~~-------------------------~---~~l~--~~~~~~l~~LI~~mL~~ 197 (1472)
+|... ++..+ ....... . ..+. ...+..+++||.+||+.
T Consensus 362 lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 441 (461)
T PHA03211 362 LFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF 441 (461)
T ss_pred cccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHccc
Confidence 55321 11111 1111100 0 0011 02345789999999999
Q ss_pred CcCCCCCHHHHHHH
Q 000470 198 EPELRFSAESYLQN 211 (1472)
Q Consensus 198 dP~~Rpsa~elL~~ 211 (1472)
||.+|||+.|+|+|
T Consensus 442 DP~~RPsa~elL~h 455 (461)
T PHA03211 442 DGARRPSAAELLRL 455 (461)
T ss_pred ChhhCcCHHHHhhC
Confidence 99999999999999
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=291.99 Aligned_cols=200 Identities=18% Similarity=0.193 Sum_probs=156.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+++++.+|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~ 137 (376)
T cd05598 58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD 137 (376)
T ss_pred CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999988889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC---------------CC---------------------CCceeeccCCCCccccCccccc
Q 000470 80 NWLYLSDFASFKPTYIPYDD---------------PS---------------------DFSFFFDTGGKRLCYLAPERFY 123 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~---------------~~---------------------~~~~~~~~~~gt~~Y~APE~~~ 123 (1472)
+.++|+|||++.......+. +. ..........||+.|+|||++.
T Consensus 138 ~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 217 (376)
T cd05598 138 GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL 217 (376)
T ss_pred CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc
Confidence 99999999987532110000 00 0000011346899999999875
Q ss_pred ccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCc
Q 000470 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 124 ~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
+..++.++|||||||++|||++|++||........ ...............++.+.+||.+|+ .+|
T Consensus 218 ----------~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p 286 (376)
T cd05598 218 ----------RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGA 286 (376)
T ss_pred ----------CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCH
Confidence 34578899999999999999999999975543222 111111111112245678999999987 599
Q ss_pred CCCC---CHHHHHHH
Q 000470 200 ELRF---SAESYLQN 211 (1472)
Q Consensus 200 ~~Rp---sa~elL~~ 211 (1472)
.+|+ +++|+++|
T Consensus 287 ~~R~~~~t~~ell~h 301 (376)
T cd05598 287 EDRLGKNGADEIKAH 301 (376)
T ss_pred hhcCCCCCHHHHhCC
Confidence 9999 99999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=255.97 Aligned_cols=293 Identities=20% Similarity=0.321 Sum_probs=228.6
Q ss_pred CCCcccccceeeeccc---cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1041 DSGWRPRGILVAHLQE---HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1041 ~~~W~p~G~lV~~l~~---H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
...|+-..-++..++. ....|+|+.+ |...++||+.|.||+|||..+.+ ......+|.+.|.|+.|+.
T Consensus 177 dsNWr~Gr~~~~rinc~Se~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~------c~~~L~GHtGSVLCLqyd~- 247 (499)
T KOG0281|consen 177 ESNWRCGRHLLQRINCRSENSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE------CLKILTGHTGSVLCLQYDE- 247 (499)
T ss_pred hcchhccceeeeeecCCcccCCceEEEEe--cchhhhcccccCceEEeccccHH------HHHhhhcCCCcEEeeeccc-
Confidence 5678866566776664 4578999998 56789999999999999998766 4456678999999999864
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
+.+++|++|.+|+|||+.+.. .+. ...+|-+.|-.+.|+.+ ++++++.|.+|.+||+.+.
T Consensus 248 -rviisGSSDsTvrvWDv~tge-------------~l~-tlihHceaVLhlrf~ng-----~mvtcSkDrsiaVWdm~sp 307 (499)
T KOG0281|consen 248 -RVIVSGSSDSTVRVWDVNTGE-------------PLN-TLIHHCEAVLHLRFSNG-----YMVTCSKDRSIAVWDMASP 307 (499)
T ss_pred -eEEEecCCCceEEEEeccCCc-------------hhh-HHhhhcceeEEEEEeCC-----EEEEecCCceeEEEeccCc
Confidence 599999999999999998511 122 22345555666678776 9999999999999999987
Q ss_pred Ccc---ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCC
Q 000470 1198 SNT---WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR 1274 (1472)
Q Consensus 1198 ~~~---~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~ 1274 (1472)
..+ ..+.+ |...|+.+.|+. .++++++.|.+|++||+.+...++.+.. |..+|-++.+ ++
T Consensus 308 s~it~rrVLvG--HrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY------------r~ 370 (499)
T KOG0281|consen 308 TDITLRRVLVG--HRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY------------RD 370 (499)
T ss_pred hHHHHHHHHhh--hhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc------------cC
Confidence 643 34444 889999999985 4999999999999999999999988764 6667888776 46
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
+++++|+.|++|++||++.|.|..++..+. .-|
T Consensus 371 rlvVSGSSDntIRlwdi~~G~cLRvLeGHE-----------------------------------------------eLv 403 (499)
T KOG0281|consen 371 RLVVSGSSDNTIRLWDIECGACLRVLEGHE-----------------------------------------------ELV 403 (499)
T ss_pred eEEEecCCCceEEEEeccccHHHHHHhchH-----------------------------------------------Hhh
Confidence 789999999999999999999988876332 258
Q ss_pred eEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhh
Q 000470 1355 RSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1434 (1472)
Q Consensus 1355 ~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1434 (1472)
+|+.|. +..+++|+-||+|++||+..+...+..++.-
T Consensus 404 RciRFd-~krIVSGaYDGkikvWdl~aaldpra~~~~~------------------------------------------ 440 (499)
T KOG0281|consen 404 RCIRFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTL------------------------------------------ 440 (499)
T ss_pred hheeec-CceeeeccccceEEEEecccccCCcccccch------------------------------------------
Confidence 888883 5689999999999999998776543222100
Q ss_pred hcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1435 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1435 ~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
....+..|.+.|..+. .+...|++++.|.+|-||+
T Consensus 441 Cl~~lv~hsgRVFrLQ---FD~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 441 CLRTLVEHSGRVFRLQ---FDEFQIISSSHDDTILIWD 475 (499)
T ss_pred HHHhhhhccceeEEEe---ecceEEEeccCCCeEEEEE
Confidence 0011123888888773 4677799999999999996
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=276.15 Aligned_cols=202 Identities=14% Similarity=0.111 Sum_probs=159.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++..+...++||||++ ++|.+++... ..+++..+..++.||+.||+|||++|
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 143 (291)
T cd05094 64 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 143 (291)
T ss_pred CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999998 6999999653 23789999999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+|||++.++.++|+|||.++...... .........++..|+|||.+. ...++.++||
T Consensus 144 i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di 208 (291)
T cd05094 144 FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDV 208 (291)
T ss_pred eeecccCcceEEEccCCcEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhc----------cCCCCchhhH
Confidence 9999999999999999999999999987543221 111112334567899999764 3457889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccC
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVF 217 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~f 217 (1472)
|||||++|||++ |.+||........ ...........+...+..+.+++.+||+.||++||++.++++.+.....
T Consensus 209 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 209 WSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 999999999998 8888754332222 1111111222344567789999999999999999999999999875533
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=278.73 Aligned_cols=199 Identities=17% Similarity=0.144 Sum_probs=161.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|.||+||++++.|..++.+||+.|||+| -....+-. ...|++.++..+++|++.||.|||+++|||||||..|||++-
T Consensus 86 CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl 165 (1187)
T KOG0579|consen 86 CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL 165 (1187)
T ss_pred CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe
Confidence 7899999999999999999999999996 55555443 345999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.++|+|||.+..... ...--++..|||+|||||+..+. ...+.+|++++||||||++|.||.-+.|
T Consensus 166 dGdirLADFGVSAKn~~-------t~qkRDsFIGTPYWMAPEVvmCE-----T~KD~PYDykaDiWSlGITLIEMAqiEP 233 (1187)
T KOG0579|consen 166 DGDIRLADFGVSAKNKS-------TRQKRDSFIGTPYWMAPEVVMCE-----TFKDQPYDYKADIWSLGITLIEMAQIEP 233 (1187)
T ss_pred cCcEeeecccccccchh-------HHhhhccccCCcccccchheeec-----cccCCCchhhhhHHhhhhHHHHHhccCC
Confidence 99999999997643211 11123677899999999998754 3457799999999999999999999998
Q ss_pred CCCchH-HHHHHhc-CCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH-LLAYRRG-QYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~-~~~~~~~-~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...-+ +..+.+. ... |...-|...+..++||+.+||.+||..||++.++|+|
T Consensus 234 PHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 234 PHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 885332 2222221 112 2223344556789999999999999999999999998
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=270.85 Aligned_cols=197 Identities=20% Similarity=0.219 Sum_probs=161.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||++ ++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.+
T Consensus 61 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~ 140 (263)
T cd06625 61 LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA 140 (263)
T ss_pred CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 579999999999999999999999998 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++......... .......++..|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~g~~p 206 (263)
T cd06625 141 GNVKLGDFGASKRLQTICSSG----TGMKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVGCTVVEMLTEKPP 206 (263)
T ss_pred CCEEEeecccceecccccccc----ccccCCCcCccccCcceec----------cCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 999999999987542211111 0112334678899999875 23478899999999999999999988
Q ss_pred CCchHH-HHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+. ..+.. ........++...+..+.++|.+||..+|++||++.|+++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 207 WAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 864332 22222 22222334556677899999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=287.63 Aligned_cols=191 Identities=21% Similarity=0.321 Sum_probs=150.7
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||+|||++||+||||||+||
T Consensus 80 l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NI 157 (364)
T cd07875 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157 (364)
T ss_pred cCCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHE
Confidence 5799999999988543 36799999999999998864 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .......++..|+|||.+. +..++.++|||||||++|||+
T Consensus 158 ll~~~~~~kL~DfG~a~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell 219 (364)
T cd07875 158 VVKSDCTLKILDFGLARTAGTS--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMI 219 (364)
T ss_pred EECCCCcEEEEeCCCccccCCC--------CcccCCcccCCcCCHHHHh----------CCCCCchhhHHhHHHHHHHHH
Confidence 9999999999999998754211 1123446788999999875 346788999999999999999
Q ss_pred hCCCCCCchHHHH----HHh----------------------cC--CC--------------CCcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLLA----YRR----------------------GQ--YD--------------PSQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~----------------------~~--~~--------------~~~~l~~~~~~~l~~LI~ 192 (1472)
+|++||....... +.. .. +. .........+..+++||.
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 299 (364)
T cd07875 220 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS 299 (364)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHH
Confidence 9999996432111 000 00 00 000111223457899999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||.+|||++|+|+|
T Consensus 300 ~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 300 KMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhcCcCcccCCCHHHHhcC
Confidence 9999999999999999999
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=287.86 Aligned_cols=191 Identities=24% Similarity=0.370 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..++ ..|+||||++++|.+.+.. .+++.++..++.||+.||.|||++||+||||||+||
T Consensus 77 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NI 154 (359)
T cd07876 77 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 154 (359)
T ss_pred CCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 58999999999986543 5799999999999888754 378999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.+|.+||+|||+++..... .......+++.|+|||.+. +..++.++|||||||++|+|+
T Consensus 155 l~~~~~~~kl~Dfg~a~~~~~~--------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~el~ 216 (359)
T cd07876 155 VVKSDCTLKILDFGLARTACTN--------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELV 216 (359)
T ss_pred EECCCCCEEEecCCCccccccC--------ccCCCCcccCCCCCchhcc----------CCCCCcchhhHHHHHHHHHHH
Confidence 9999999999999998643211 1123345788999999875 346788999999999999999
Q ss_pred hCCCCCCchHHH--------------------------HHHhc--CCCC--------------CcccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLL--------------------------AYRRG--QYDP--------------SQHLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~--------------------------~~~~~--~~~~--------------~~~l~~~~~~~l~~LI~ 192 (1472)
+|++||...... .+... .+.. ........++.+++||.
T Consensus 217 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 296 (359)
T cd07876 217 KGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLS 296 (359)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHH
Confidence 999999633210 00000 0000 00111234567999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||+.||++|||+.|+|+|
T Consensus 297 ~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 297 KMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=288.53 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 58 l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~ 137 (381)
T cd05626 58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD 137 (381)
T ss_pred cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC
Confidence 579999999999999999999999998 6999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC---------------CC-------------------------CCceeeccCCCCccccCc
Q 000470 80 NWLYLSDFASFKPTYIPYDD---------------PS-------------------------DFSFFFDTGGKRLCYLAP 119 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~---------------~~-------------------------~~~~~~~~~~gt~~Y~AP 119 (1472)
+.+||+|||+++........ +. .......+..||+.|+||
T Consensus 138 ~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 217 (381)
T cd05626 138 GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAP 217 (381)
T ss_pred CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCH
Confidence 99999999987533111000 00 000011234689999999
Q ss_pred ccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhc
Q 000470 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 120 E~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL 195 (1472)
|++. +..++.++|||||||++|||++|.+||....... +...............++++++||.+|+
T Consensus 218 E~~~----------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll 287 (381)
T cd05626 218 EVLL----------RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLC 287 (381)
T ss_pred HHHc----------CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHc
Confidence 9875 3357889999999999999999999996543222 1111111111112235688999999976
Q ss_pred cc--CcCCCCCHHHHHHH
Q 000470 196 QL--EPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~--dP~~Rpsa~elL~~ 211 (1472)
.. +|..|++++|+++|
T Consensus 288 ~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 288 CSAEERLGRNGADDIKAH 305 (381)
T ss_pred cCcccccCCCCHHHHhcC
Confidence 54 45559999999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=285.33 Aligned_cols=195 Identities=21% Similarity=0.211 Sum_probs=153.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++.+|+||||++ |+|.+. ..+.+..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 129 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 204 (353)
T PLN00034 129 VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA 204 (353)
T ss_pred CCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 579999999999999999999999999 577653 335788889999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||+++....... ......|+..|+|||.+.... ..+...+.++|||||||++|||++|+.|
T Consensus 205 ~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 205 KNVKIADFGVSRILAQTMD-------PCNSSVGTIAYMSPERINTDL-----NHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred CCEEEcccccceecccccc-------cccccccCccccCcccccccc-----ccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 9999999999875532111 113446789999999875321 1233456789999999999999999999
Q ss_pred CCchH---HHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH---LLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~---~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .... ...........+...+.++++||.+||+.||++||++.|+++|
T Consensus 273 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 273 FGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 96322 1111 1111222233445567889999999999999999999999998
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=285.14 Aligned_cols=200 Identities=19% Similarity=0.148 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||++ |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR 137 (330)
T ss_pred CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC
Confidence 479999999999999999999999998 6999999875 67999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|.+||+|||+++...... ........|++.|+|||.+..... .....++.++|||||||++|||++|..
T Consensus 138 ~~~~kL~Dfg~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~el~~g~~ 207 (330)
T cd05601 138 TGHIKLADFGSAARLTANK------MVNSKLPVGTPDYIAPEVLTTMNG----DGKGTYGVECDWWSLGVIAYEMIYGRS 207 (330)
T ss_pred CCCEEeccCCCCeECCCCC------ceeeecccCCccccCHHHhccccc----cccCCCCCcceeecccceeeeeccCCC
Confidence 9999999999987542211 112233467899999998763321 124467899999999999999999999
Q ss_pred CCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... +...............++.+++||.+||. ||++||+++++++|
T Consensus 208 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 208 PFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 996543222 11111111111122356789999999998 99999999999998
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=290.20 Aligned_cols=196 Identities=24% Similarity=0.323 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+. ..|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 56 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (372)
T cd07853 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL 135 (372)
T ss_pred CCCCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEE
Confidence 58999999999998876 8999999999999999988788999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++...... ........+++.|+|||.+.+ ...++.++||||+||++|||++
T Consensus 136 i~~~~~~kL~Dfg~a~~~~~~~------~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~ 200 (372)
T cd07853 136 VNSNCVLKICDFGLARVEEPDE------SKHMTQEVVTQYYRAPEILMG---------SRHYTSAVDIWSVGCIFAELLG 200 (372)
T ss_pred ECCCCCEEeccccceeecccCc------cccCCCCCcCCCcCCHHHHcC---------CCCCCcHHHHHhHHHHHHHHHc
Confidence 9999999999999987542211 111233456888999998752 2346889999999999999999
Q ss_pred CCCCCCchHHHH----HH-----------------------hcCCCCCc-----ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 156 EVPFFELSHLLA----YR-----------------------RGQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~-----------------------~~~~~~~~-----~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
|++||....... +. .....+.. .+....++.+.+||.+||+.||++||
T Consensus 201 g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 280 (372)
T cd07853 201 RRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI 280 (372)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc
Confidence 999996432111 10 00011100 12233467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|++|+++|
T Consensus 281 t~~e~l~h 288 (372)
T cd07853 281 SAADALAH 288 (372)
T ss_pred CHHHHhcC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=253.35 Aligned_cols=283 Identities=18% Similarity=0.255 Sum_probs=232.5
Q ss_pred cceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q 000470 1059 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1138 (1472)
Q Consensus 1059 ~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~ 1138 (1472)
..||+++|+.+|.+||||+.||.++||+.... ...++..|.++|.++.|...|++|++++-||++.+||..+
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~-------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~- 307 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGN-------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT- 307 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCch-------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC-
Confidence 56999999999999999999999999998653 3457788999999999999999999999999999999963
Q ss_pred ccCCCccccccCcccceeecCCCCcE-EEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEE
Q 000470 1139 SRGLGNVEKYSGISDIKKKDTKEGAI-VTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1139 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1217 (1472)
+ .+.+...-+..+ +.+. |-.+ ..+++++.||.|+++-+...+++.++.+ |++.|.++.|
T Consensus 308 ----g---------~~~q~f~~~s~~~lDVd-W~~~----~~F~ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~ 367 (524)
T KOG0273|consen 308 ----G---------TVKQQFEFHSAPALDVD-WQSN----DEFATSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKW 367 (524)
T ss_pred ----c---------eEEEeeeeccCCccceE-EecC----ceEeecCCCceEEEEEecCCCcceeeec--ccCceEEEEE
Confidence 1 112222222222 3333 4332 2899999999999999999999999988 9999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEE
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1297 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~ 1297 (1472)
+|.|..|++++.||++++|.+....+...+.. |...|..+.| +|.+........+-.+++++.|+.|++||++.|.|.
T Consensus 368 n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~-Hskei~t~~w-sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i 445 (524)
T KOG0273|consen 368 NPTGSLLASCSDDGTLKIWSMGQSNSVHDLQA-HSKEIYTIKW-SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPI 445 (524)
T ss_pred CCCCceEEEecCCCeeEeeecCCCcchhhhhh-hccceeeEee-cCCCCccCCCcCCceEEEeecCCeEEEEEccCCcee
Confidence 99999999999999999999988888887765 6667888988 888765444455667889999999999999999998
Q ss_pred EEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEE
Q 000470 1298 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRR 1376 (1472)
Q Consensus 1298 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~Irl 1376 (1472)
.+|- .|..+|++++|+|+| ++++|+.||.|.+
T Consensus 446 ~~f~-----------------------------------------------kH~~pVysvafS~~g~ylAsGs~dg~V~i 478 (524)
T KOG0273|consen 446 HTLM-----------------------------------------------KHQEPVYSVAFSPNGRYLASGSLDGCVHI 478 (524)
T ss_pred Eeec-----------------------------------------------cCCCceEEEEecCCCcEEEecCCCCeeEe
Confidence 8874 233479999999999 7779999999999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCC
Q 000470 1377 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1456 (1472)
Q Consensus 1377 WDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1456 (1472)
|+...++..+... -.+.|..| .|+.+|
T Consensus 479 ws~~~~~l~~s~~----------------------------------------------------~~~~Ifel-~Wn~~G 505 (524)
T KOG0273|consen 479 WSTKTGKLVKSYQ----------------------------------------------------GTGGIFEL-CWNAAG 505 (524)
T ss_pred ccccchheeEeec----------------------------------------------------CCCeEEEE-EEcCCC
Confidence 9998776543332 24568999 699999
Q ss_pred cEEEEEcCCceEEEc
Q 000470 1457 RLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1457 ~~LvS~s~DG~IkVW 1471 (1472)
..|..+-.||.|.|-
T Consensus 506 ~kl~~~~sd~~vcvl 520 (524)
T KOG0273|consen 506 DKLGACASDGSVCVL 520 (524)
T ss_pred CEEEEEecCCCceEE
Confidence 999988889998874
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=281.61 Aligned_cols=203 Identities=19% Similarity=0.196 Sum_probs=152.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|+||||++ |+|.+++.. ...+++.++++++.|++.||+|||++||+||||||+|||++
T Consensus 56 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~ 135 (327)
T cd08227 56 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 135 (327)
T ss_pred cCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe
Confidence 589999999999999999999999999 699999965 34589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++++||+.................+.....++..|+|||.+... ...++.++||||+||++|||++|.
T Consensus 136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~il~el~~g~ 207 (327)
T cd08227 136 VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN--------LQGYDAKSDIYSVGITACELANGH 207 (327)
T ss_pred cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcc--------cCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999999986543321111100000011223456779999987521 235788999999999999999999
Q ss_pred CCCCchHHHH----HHhcCCC----------------C--------------------------CcccCCCCCHHHHHHH
Q 000470 158 PFFELSHLLA----YRRGQYD----------------P--------------------------SQHLEKIPDSGIRKMI 191 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~~----------------~--------------------------~~~l~~~~~~~l~~LI 191 (1472)
+||....... ...+... + ........++.+++||
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 287 (327)
T cd08227 208 VPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFV 287 (327)
T ss_pred CCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHH
Confidence 9986322111 0000000 0 0001112356799999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 000470 192 LHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 192 ~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||+.||++|||++|+++|
T Consensus 288 ~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 288 EQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred HHHHhhCchhcCCHHHHhcC
Confidence 99999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=285.60 Aligned_cols=193 Identities=19% Similarity=0.243 Sum_probs=151.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|++++.. ...+++.+++.|+.||+.||.|||++||+||||||+|||++..
T Consensus 114 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 193 (357)
T PHA03209 114 VNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV 193 (357)
T ss_pred CCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 589999999999999999999999999999999865 3568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-CC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~ 158 (1472)
+.++|+|||.++..... + ......|++.|+|||.+. +..++.++|||||||++|||+++ .+
T Consensus 194 ~~~kl~DfG~a~~~~~~---~-----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 194 DQVCIGDLGAAQFPVVA---P-----AFLGLAGTVETNAPEVLA----------RDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred CCEEEecCccccccccC---c-----ccccccccccccCCeecC----------CCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 99999999988643211 1 112345788999999875 34678899999999999999986 66
Q ss_pred CCCch-------------HHHHHHhc-CCCCCc-------------------------c---c-CCCCCHHHHHHHHHhc
Q 000470 159 FFELS-------------HLLAYRRG-QYDPSQ-------------------------H---L-EKIPDSGIRKMILHMI 195 (1472)
Q Consensus 159 pf~~~-------------~~~~~~~~-~~~~~~-------------------------~---l-~~~~~~~l~~LI~~mL 195 (1472)
+|... .+..+... ...+.. . + ....+..+.+||.+||
T Consensus 256 ~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL 335 (357)
T PHA03209 256 IFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKML 335 (357)
T ss_pred cccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHH
Confidence 65421 11111110 000000 0 0 0123456788999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 000470 196 QLEPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rpsa~elL~~ 211 (1472)
+.||++|||+.|+|+|
T Consensus 336 ~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 336 TFDAAMRPSAEEILNY 351 (357)
T ss_pred cCCcccCcCHHHHhcC
Confidence 9999999999999998
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=272.56 Aligned_cols=193 Identities=18% Similarity=0.171 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 50 l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~ 129 (277)
T cd05607 50 VNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD 129 (277)
T ss_pred cCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc
Confidence 589999999999999999999999998 69998886533 488999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||++....... ......|+..|+|||.+. +..++.++||||+||++|||++|.
T Consensus 130 ~~~~~~l~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 130 DQGNCRLSDLGLAVELKDGK--------TITQRAGTNGYMAPEILK----------EEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred CCCCEEEeeceeeeecCCCc--------eeeccCCCCCccCHHHHc----------cCCCCCchhHHHHHHHHHHHHhCC
Confidence 99999999999886542111 112345788999999874 234788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... .....+...... .......++++++||.+||+.||++||++.|++++
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 192 TPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred CCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 9986421 111212111111 11123457789999999999999999999666544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=279.70 Aligned_cols=193 Identities=21% Similarity=0.259 Sum_probs=162.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++.|.++|..+...|||||||-|+-.|++.- ++.+.+.++..|+.+.+.||.|||+++.||||||..|||++..
T Consensus 83 l~HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~ 162 (948)
T KOG0577|consen 83 LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP 162 (948)
T ss_pred ccCCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC
Confidence 589999999999999999999999999988777743 4459999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC-C
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-P 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~ 158 (1472)
|.|||+|||++.... | ..++.|||.|||||++.. ...+.|+-++||||||+++.||...+ |
T Consensus 163 g~VKLaDFGSAsi~~-----P------AnsFvGTPywMAPEVILA-------MDEGqYdgkvDvWSLGITCIELAERkPP 224 (948)
T KOG0577|consen 163 GLVKLADFGSASIMA-----P------ANSFVGTPYWMAPEVILA-------MDEGQYDGKVDVWSLGITCIELAERKPP 224 (948)
T ss_pred CeeeeccccchhhcC-----c------hhcccCCccccchhHhee-------ccccccCCccceeeccchhhhhhhcCCC
Confidence 999999999876441 1 256789999999999973 34568999999999999999999995 5
Q ss_pred CCCchHHHHHHhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+|+.+-...+........+.+.. -.+..++.||..||++-|.+|||.+++|+|
T Consensus 225 lFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 225 LFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 56666555544433333333333 345789999999999999999999999998
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=255.57 Aligned_cols=204 Identities=23% Similarity=0.310 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecC
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~D 68 (1472)
++||||++++++...+ ...||+++|.. |+|.|.|.. ..++++.++.+|+.+|++||++||+.. +.|||
T Consensus 75 f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D 154 (302)
T KOG2345|consen 75 FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD 154 (302)
T ss_pred hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence 4799999998876443 35999999999 899998864 347999999999999999999999998 99999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceee--ccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF--DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~--~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|||.|||+++.+.++|.|||++......-.+..+....- .....|..|+|||.|.- ......+.++|||||
T Consensus 155 iKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v-------k~~~ti~ertDIWSL 227 (302)
T KOG2345|consen 155 IKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV-------KSHCTITERTDIWSL 227 (302)
T ss_pred CCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec-------ccCcccccccchhhh
Confidence 999999999999999999999876543322221111110 12234778999999973 335578999999999
Q ss_pred HHHHHHHHhCCCCCCchHH------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 147 GCVIAELFLEVPFFELSHL------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 147 G~il~eLltg~~pf~~~~~------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||++|+|+.|..||+..-. .....+.+..+ -....++.+.++|..||+.||.+||++.+++.++.
T Consensus 228 GCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P--~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 228 GCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIP--NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred hHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccC--CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 9999999999999973211 01111122211 12246789999999999999999999999998853
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=279.62 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=150.1
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccCCcHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFFNSLRDRLST---------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~gsL~d~l~~---------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.. +...|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||
T Consensus 55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dl 134 (317)
T cd07867 55 LKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDL 134 (317)
T ss_pred CCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCC
Confidence 589999999998854 568899999999999998752 124889999999999999999999999999999
Q ss_pred CCCCEEE----ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 70 KCENVLV----TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 70 KpeNILv----~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||+|||+ +..+.+||+|||+++....+.... .......+++.|+|||.+.. ...++.++||||
T Consensus 135 kp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwS 201 (317)
T cd07867 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPL----ADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWA 201 (317)
T ss_pred CHHHEEEccCCCCCCcEEEeeccceeccCCCcccc----cccCcceecccccCcHHhcC---------CCccCcHHHHHh
Confidence 9999999 456789999999987653322111 11234457888999998752 235788999999
Q ss_pred HHHHHHHHHhCCCCCCchHH-------------HHHHh----------------------------cCCCCC------cc
Q 000470 146 VGCVIAELFLEVPFFELSHL-------------LAYRR----------------------------GQYDPS------QH 178 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~~-------------~~~~~----------------------------~~~~~~------~~ 178 (1472)
+||++|||++|++||..... ..+.. ..+... ..
T Consensus 202 lG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (317)
T cd07867 202 IGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEK 281 (317)
T ss_pred HHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhc
Confidence 99999999999999853211 00000 000000 00
Q ss_pred cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 179 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 179 l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.....+..+.+||.+||+.||.+|||++|+|+|
T Consensus 282 ~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 282 HKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred ccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 011234568899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=285.55 Aligned_cols=198 Identities=18% Similarity=0.203 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~ 178 (371)
T cd05622 100 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 178 (371)
T ss_pred CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCC
Confidence 579999999999999999999999998 6999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||+++...... .....+..||+.|+|||++.... ....++.++|||||||++|||++|.+|
T Consensus 179 ~~ikL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~~~~DiwSlGvilyell~G~~P 246 (371)
T cd05622 179 GHLKLADFGTCMKMNKEG------MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTP 246 (371)
T ss_pred CCEEEEeCCceeEcCcCC------cccccCcccCccccCHHHHhccC------CCccCCCccceeehhHHHHHHHhCCCC
Confidence 999999999987552111 11123556899999999885321 123478899999999999999999999
Q ss_pred CCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
|....... +...............+..+++||.+||..++.+ |++++|+++|
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 247 FYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 97654332 2222211111122345778999999999844433 7799999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=279.69 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+||||+. |+|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~ 139 (333)
T cd06650 60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 139 (333)
T ss_pred CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC
Confidence 589999999999999999999999998 69999998877899999999999999999999985 7999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||++....... .....++..|+|||.+. +..++.++|||||||++|||++|+.
T Consensus 140 ~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~ 200 (333)
T cd06650 140 RGEIKLCDFGVSGQLIDSM---------ANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAIGRY 200 (333)
T ss_pred CCCEEEeeCCcchhhhhhc---------cccCCCCccccCHHHhc----------CCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 9999999999886542110 12335788999999774 3357889999999999999999988
Q ss_pred CCCchHHHHHHhc---------------------------------------------CCCCCcccC-CCCCHHHHHHHH
Q 000470 159 FFELSHLLAYRRG---------------------------------------------QYDPSQHLE-KIPDSGIRKMIL 192 (1472)
Q Consensus 159 pf~~~~~~~~~~~---------------------------------------------~~~~~~~l~-~~~~~~l~~LI~ 192 (1472)
||........... .....+.++ ...+.++++||.
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 280 (333)
T cd06650 201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVN 280 (333)
T ss_pred CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHH
Confidence 8864322211100 000000111 124578999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||++||++||+++|+++|
T Consensus 281 ~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 281 KCLIKNPAERADLKQLMVH 299 (333)
T ss_pred HhccCCcccCcCHHHHhhC
Confidence 9999999999999999988
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=276.88 Aligned_cols=195 Identities=23% Similarity=0.337 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+||||++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 61 l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~ 140 (301)
T cd07873 61 LKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER 140 (301)
T ss_pred cCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC
Confidence 579999999999999999999999999999999876 3468999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....+.. ......+++.|+|||.+.. ...++.++|||||||++|||++|++|
T Consensus 141 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~~ 204 (301)
T cd07873 141 GELKLADFGLARAKSIPTK-------TYSNEVVTLWYRPPDILLG---------STDYSTQIDMWGVGCIFYEMSTGRPL 204 (301)
T ss_pred CcEEECcCcchhccCCCCC-------cccccceeecccCcHHHhC---------CCCCccHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999875432211 1123345788999997642 23567899999999999999999999
Q ss_pred CCchHHHHH----HhcCC-------------------CCC-------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAY----RRGQY-------------------DPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~-------------------~~~-------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|......+. ..... ... .......++.+++||.+||+.||.+|||++|++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil 284 (301)
T cd07873 205 FPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM 284 (301)
T ss_pred CCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 965432111 11000 000 011123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 285 ~h 286 (301)
T cd07873 285 KH 286 (301)
T ss_pred cC
Confidence 98
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=296.58 Aligned_cols=190 Identities=17% Similarity=0.220 Sum_probs=149.4
Q ss_pred CCCCcceeeEEEEeC-CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETD-KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~ 79 (1472)
.|++++++++++..+ .++|+|||++.++|.+++..++.+++.+++.|++||+.||+|||+ .||+||||||+|||++..
T Consensus 189 ~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 189 DRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 467799999998765 589999999999999999888889999999999999999999998 599999999999999876
Q ss_pred C----------------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 80 N----------------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 80 ~----------------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
+ .+||+|||.+..... ......||+.|+|||++. +..++.++||
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----------~~~~~~gt~~Y~APE~~~----------~~~~~~~~Di 328 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH----------SRTAIVSTRHYRSPEVVL----------GLGWMYSTDM 328 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc----------ccccccCCccccCcHHhh----------cCCCCcHHHH
Confidence 5 499999997653211 112446789999999875 3467889999
Q ss_pred HHHHHHHHHHHhCCCCCCchHHHH----HHhcC--C-----------------------CCC-------------cccCC
Q 000470 144 FAVGCVIAELFLEVPFFELSHLLA----YRRGQ--Y-----------------------DPS-------------QHLEK 181 (1472)
Q Consensus 144 wSlG~il~eLltg~~pf~~~~~~~----~~~~~--~-----------------------~~~-------------~~l~~ 181 (1472)
|||||++|||++|++||....... +.... . .+. .....
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 999999999999999996432111 10000 0 000 00001
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 182 IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 182 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.++.+.+||.+||++||++|||++|+|+|
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 234567899999999999999999999999
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-27 Score=273.04 Aligned_cols=195 Identities=14% Similarity=0.140 Sum_probs=157.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-------------FLSLVEKKWLAFQLLLAVKQCHEKGICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-------------~l~~~~~~~i~~Qll~aL~~LH~~gIvH 66 (1472)
++||||+++++++..+...|+||||++ ++|.+++...+ .+++.++..++.||+.||+|||++|++|
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H 143 (288)
T cd05093 64 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVH 143 (288)
T ss_pred CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 579999999999999999999999999 69999996432 4899999999999999999999999999
Q ss_pred cCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 67 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 67 ~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|||||+|||+++++.++|+|||.++...... .........++..|+|||.+. ...++.++|||||
T Consensus 144 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwsl 208 (288)
T cd05093 144 RDLATRNCLVGENLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSL 208 (288)
T ss_pred cccCcceEEEccCCcEEeccCCccccccCCc-----eeecCCCCCccccccCHHHhc----------cCCCCchhhHHHH
Confidence 9999999999999999999999987553211 111112333467799999764 3457889999999
Q ss_pred HHHHHHHHh-CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 147 GCVIAELFL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 147 G~il~eLlt-g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||++|||++ |.+||....... +..+.. ...+...+..+.+|+.+||+.||.+||++.|+++.+.
T Consensus 209 G~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 209 GVVLWEIFTYGKQPWYQLSNNEVIECITQGRV---LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 999999998 788886443222 222221 2234456788999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=284.64 Aligned_cols=200 Identities=21% Similarity=0.257 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+++++..|+||||++ |+|.+++..++.+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus 58 l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~ 137 (360)
T cd05627 58 ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAK 137 (360)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCC----------CCCCCc------------------eeeccCCCCccccCcccccccCCcccc
Q 000470 80 NWLYLSDFASFKPTYIPYD----------DPSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQV 131 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~----------~~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~ 131 (1472)
|.++|+|||+++....... .+..+. ....+..||+.|+|||++.
T Consensus 138 ~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-------- 209 (360)
T cd05627 138 GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM-------- 209 (360)
T ss_pred CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc--------
Confidence 9999999999864421100 000000 0011346899999999875
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHHHHhcCC--CCCcccC--CCCCHHHHHHHHHhcccCcCCCC---C
Q 000470 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY--DPSQHLE--KIPDSGIRKMILHMIQLEPELRF---S 204 (1472)
Q Consensus 132 ~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~--~~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rp---s 204 (1472)
+..++.++|||||||++|||++|++||............. .....++ ...++.+++||.+|+. ||.+|+ +
T Consensus 210 --~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~ 286 (360)
T cd05627 210 --QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNG 286 (360)
T ss_pred --CCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCC
Confidence 3467889999999999999999999996554332211111 1111112 1256789999999874 999998 4
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 287 ~~ei~~h 293 (360)
T cd05627 287 VEEIKSH 293 (360)
T ss_pred HHHHhcC
Confidence 7999988
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=272.59 Aligned_cols=195 Identities=21% Similarity=0.310 Sum_probs=154.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~ 135 (285)
T cd07861 56 LQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID 135 (285)
T ss_pred cCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc
Confidence 5799999999999999999999999999999988653 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++....+.. ......+++.|+|||.+.. ...++.++|||||||++|+|++|+
T Consensus 136 ~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 136 NKGVIKLADFGLARAFGIPVR-------VYTHEVVTLWYRAPEVLLG---------SPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred CCCcEEECcccceeecCCCcc-------cccCCcccccccChHHhcC---------CCCcCcHHHHHHHHHHHHHHHHCC
Confidence 999999999999875532211 1123345788999997642 234678999999999999999999
Q ss_pred CCCCchHHHH----H---------------------HhcCCC----CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHLLA----Y---------------------RRGQYD----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~~~----~---------------------~~~~~~----~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||....... + +..... .........+++++++|.+||+.||++|||+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l 279 (285)
T cd07861 200 PLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA 279 (285)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 9996432111 0 000000 0001122356789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 280 l~~ 282 (285)
T cd07861 280 LNH 282 (285)
T ss_pred hcC
Confidence 988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-27 Score=250.35 Aligned_cols=199 Identities=23% Similarity=0.322 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
|+|+|++.+++++.+. ..+|+||.+|+.+|..+++.+ .+++..+++.++.+++.||.|+|...|+|||+|+
T Consensus 73 lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKa 152 (376)
T KOG0669|consen 73 LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKA 152 (376)
T ss_pred hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccH
Confidence 6899999998877432 258999999999999999986 5799999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+|+|++.+|.+||+|||+++....+.+..... +....-|.+|++||.+.+ ...|++++|||..|||++
T Consensus 153 aNvLIt~dgilklADFGlar~fs~~~n~~kpr---ytnrvvTLwYrppEllLG---------~r~yg~~iDiWgAgCima 220 (376)
T KOG0669|consen 153 ANVLITKDGILKLADFGLARAFSTSKNVVKPR---YTNRVVTLWYRPPELLLG---------DREYGPPIDIWGAGCIMA 220 (376)
T ss_pred hhEEEcCCceEEeeccccccceecccccCCCC---cccceeeeecCCHHHhhc---------ccccCCcchhHhHHHHHH
Confidence 99999999999999999998876654432211 244556999999998863 357899999999999999
Q ss_pred HHHhCCCCCCchHHHH-------------------------HHhcCCCCCcc----------cCCCCCHHHHHHHHHhcc
Q 000470 152 ELFLEVPFFELSHLLA-------------------------YRRGQYDPSQH----------LEKIPDSGIRKMILHMIQ 196 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~-------------------------~~~~~~~~~~~----------l~~~~~~~l~~LI~~mL~ 196 (1472)
||+++.|.|....... |......|.+. -+...+++..+|+.+||.
T Consensus 221 eMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~ 300 (376)
T KOG0669|consen 221 EMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLK 300 (376)
T ss_pred HHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhc
Confidence 9999999996543211 11111111000 011235678899999999
Q ss_pred cCcCCCCCHHHHHHH
Q 000470 197 LEPELRFSAESYLQN 211 (1472)
Q Consensus 197 ~dP~~Rpsa~elL~~ 211 (1472)
.||.+|+.++++++|
T Consensus 301 ~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 301 LDPTKRIDADQALNH 315 (376)
T ss_pred cCcccCcchHhhhch
Confidence 999999999999998
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-27 Score=274.15 Aligned_cols=197 Identities=14% Similarity=0.105 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------CCCCHHHHHHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------PFLSLVEKKWLAFQLLLAVKQCH 60 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------------------~~l~~~~~~~i~~Qll~aL~~LH 60 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++.++..++.||+.||.|||
T Consensus 76 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 155 (304)
T cd05096 76 LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS 155 (304)
T ss_pred cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999998 6999998653 23677889999999999999999
Q ss_pred HCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCcc
Q 000470 61 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPS 140 (1472)
Q Consensus 61 ~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~ 140 (1472)
++||+||||||+|||++.++.+||+|||.++...... .........++..|+|||.+. ...++.+
T Consensus 156 ~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~ 220 (304)
T cd05096 156 SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGD-----YYRIQGRAVLPIRWMAWECIL----------MGKFTTA 220 (304)
T ss_pred HCCccccCcchhheEEcCCccEEECCCccceecccCc-----eeEecCcCCCCccccCHHHHh----------cCCCCch
Confidence 9999999999999999999999999999987552211 111123344577899999764 3357889
Q ss_pred chHHHHHHHHHHHHhC--CCCCCchHHHHH--------HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000470 141 MDIFAVGCVIAELFLE--VPFFELSHLLAY--------RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210 (1472)
Q Consensus 141 ~DIwSlG~il~eLltg--~~pf~~~~~~~~--------~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 210 (1472)
+|||||||++|||+++ ..||........ ...........+...+..+.+|+.+||+.||++|||++|+.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999874 567753221111 111111111223345678999999999999999999999987
Q ss_pred Hh
Q 000470 211 NY 212 (1472)
Q Consensus 211 ~~ 212 (1472)
.+
T Consensus 301 ~l 302 (304)
T cd05096 301 FL 302 (304)
T ss_pred HH
Confidence 64
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=270.66 Aligned_cols=198 Identities=13% Similarity=0.091 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----------------PFLSLVEKKWLAFQLLLAVKQCHEK 62 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----------------~~l~~~~~~~i~~Qll~aL~~LH~~ 62 (1472)
+.||||+++++++..+...|++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||++
T Consensus 64 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 143 (283)
T cd05090 64 LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH 143 (283)
T ss_pred CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999 6999998532 2478889999999999999999999
Q ss_pred CCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccch
Q 000470 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142 (1472)
Q Consensus 63 gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~D 142 (1472)
||+||||||+|||++.++.++|+|||+++...... .........++..|+|||.+. +..++.++|
T Consensus 144 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~D 208 (283)
T cd05090 144 FFVHKDLAARNILIGEQLHVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIM----------YGKFSSDSD 208 (283)
T ss_pred CeehhccccceEEEcCCCcEEeccccccccccCCc-----ceecccCCCccceecChHHhc----------cCCCCchhh
Confidence 99999999999999999999999999987653211 111223344567799999764 335788999
Q ss_pred HHHHHHHHHHHHh-CCCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 143 IFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 143 IwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||||++|||++ |.+||......... ..........+...++.+++++.+||+.||++||++.+++++++
T Consensus 209 v~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 209 IWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 9999999999998 88888543222211 11111122244566788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=270.91 Aligned_cols=192 Identities=17% Similarity=0.206 Sum_probs=159.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+.+++++..++..|+||||+. |+|.+++..++.+++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~ 134 (279)
T cd05633 55 DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG 134 (279)
T ss_pred CCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC
Confidence 68999999999999999999999999 69999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||++....... .....|+..|+|||.+.. +..++.++||||+||++|||++|..||
T Consensus 135 ~~~l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~pf 196 (279)
T cd05633 135 HVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQK---------GTAYDSSADWFSLGCMLFKLLRGHSPF 196 (279)
T ss_pred CEEEccCCcceeccccC---------ccCcCCCcCccCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence 99999999876442110 122357889999997641 235788999999999999999998888
Q ss_pred Cch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ...............++...+..++++|.+||+.||++|+ ++.|+++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 197 RQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 532 2222223333333345556678999999999999999999 69999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=259.71 Aligned_cols=346 Identities=17% Similarity=0.252 Sum_probs=261.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
+..++.+|-+.|++|.|+.|.++|++||.|-++|||+++..+.. ....+.+|...|.++-|..+...+.+.+.||.
T Consensus 137 l~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~----~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~ 212 (893)
T KOG0291|consen 137 LHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNL----FTYALNGHKDYVVACFFGANSLDLYTVSKDGA 212 (893)
T ss_pred EeeeecCCccceeEEEeccCCceEEeccccceEEEEEecccccc----ceEeccCCCcceEEEEeccCcceEEEEecCce
Confidence 45678899999999999999999999999999999999876632 23466789999999999999999999999999
Q ss_pred EEEEEccccccCCCc-------------c-ccccCcc------cceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeE
Q 000470 1130 IHMFSVDHISRGLGN-------------V-EKYSGIS------DIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGI 1189 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~-------------~-~~~~~~~------~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I 1189 (1472)
+.+|..+........ . ....+.. ..+.+....+..+++.+|++. .++|++|=..|..
T Consensus 213 l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~---t~~lvvgFssG~f 289 (893)
T KOG0291|consen 213 LFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG---TNLLVVGFSSGEF 289 (893)
T ss_pred EEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC---ceEEEEEecCCee
Confidence 999988721000000 0 0000000 112223344578899999998 6799999999999
Q ss_pred EEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCC-CcEEEEECCCCcccceEeccccCCceeEEeecCCCCCc
Q 000470 1190 HLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSR-GVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1268 (1472)
Q Consensus 1190 ~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssd-G~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~ 1268 (1472)
.++++..-.+++.+.. ....|.+++|+..|.||+.|++. |.+-+|+.+...-+-.-+ +|...++++.+ +|+++
T Consensus 290 ~LyelP~f~lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ-gH~~~i~~l~Y-SpDgq-- 363 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ-GHSDRITSLAY-SPDGQ-- 363 (893)
T ss_pred EEEecCCceEEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc-ccccceeeEEE-CCCCc--
Confidence 9999999888888876 45689999999999999999876 899999998776665533 46678999998 88776
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000470 1269 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1269 ~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
++++|+.||.|+|||..+|-|..+|..
T Consensus 364 -------~iaTG~eDgKVKvWn~~SgfC~vTFte---------------------------------------------- 390 (893)
T KOG0291|consen 364 -------LIATGAEDGKVKVWNTQSGFCFVTFTE---------------------------------------------- 390 (893)
T ss_pred -------EEEeccCCCcEEEEeccCceEEEEecc----------------------------------------------
Confidence 899999999999999999999888862
Q ss_pred CCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecC--ceEEEEeeecCCcchhh
Q 000470 1349 PRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSS--GVQVVQERKRQPLTSKL 1425 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~ 1425 (1472)
|..+|+++.|+..| .+++.+-||+||.||+.+..+-+.+.+|+. .++....++ |-.+....... -..
T Consensus 391 -Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p------~QfscvavD~sGelV~AG~~d~---F~I 460 (893)
T KOG0291|consen 391 -HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP------IQFSCVAVDPSGELVCAGAQDS---FEI 460 (893)
T ss_pred -CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc------eeeeEEEEcCCCCEEEeeccce---EEE
Confidence 44489999999888 677999999999999999888888877642 233333332 32222211000 000
Q ss_pred hhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1426 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1426 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
-........-.+.+.||.++|.++ .|++.+..|+|+|+|.+||+|+
T Consensus 461 fvWS~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 461 FVWSVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred EEEEeecCeeeehhcCCCCcceee-EEccccCeEEeccccceEEEEE
Confidence 000001111345677999999999 4999999999999999999996
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=275.98 Aligned_cols=211 Identities=19% Similarity=0.331 Sum_probs=185.9
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.....|-||.++|.++.|+|+.+||+|||.|++||+|.+.+.. ....|.+|..+|+++.|+|.|.+||+||.|+
T Consensus 442 ~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~ 515 (707)
T KOG0263|consen 442 GTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQ 515 (707)
T ss_pred ceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccce------eEEEecCCCcceeeEEecCCceEEEecCCCc
Confidence 3456699999999999999999999999999999999998754 6678889999999999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+-++|..+.. .+.|. ...|-.-+.|+.|+|+ .+++++|+.|.+|++||+.+|..++.+.+ |
T Consensus 516 tArLWs~d~~-------------~PlRi-faghlsDV~cv~FHPN---s~Y~aTGSsD~tVRlWDv~~G~~VRiF~G--H 576 (707)
T KOG0263|consen 516 TARLWSTDHN-------------KPLRI-FAGHLSDVDCVSFHPN---SNYVATGSSDRTVRLWDVSTGNSVRIFTG--H 576 (707)
T ss_pred eeeeeecccC-------------Cchhh-hcccccccceEEECCc---ccccccCCCCceEEEEEcCCCcEEEEecC--C
Confidence 9999998841 12232 3345556788999999 67999999999999999999999999977 9
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
.++|++++|+|+|.+|++|+.||.|++||+..+.++..+.. |.+.|.++.| +.++ ..+++|++|+.|++
T Consensus 577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsF-S~dg---------~vLasgg~DnsV~l 645 (707)
T KOG0263|consen 577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSF-SRDG---------NVLASGGADNSVRL 645 (707)
T ss_pred CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-ccCceeEEEE-ecCC---------CEEEecCCCCeEEE
Confidence 99999999999999999999999999999999999988775 5778999998 6554 48999999999999
Q ss_pred EEcCCCe
Q 000470 1289 WNAENGS 1295 (1472)
Q Consensus 1289 WDl~t~~ 1295 (1472)
||+.+..
T Consensus 646 WD~~~~~ 652 (707)
T KOG0263|consen 646 WDLTKVI 652 (707)
T ss_pred EEchhhc
Confidence 9997643
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=235.21 Aligned_cols=201 Identities=25% Similarity=0.355 Sum_probs=163.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|+|.|||+++++...++.+-+|+|||..+|..+... ++.++.+.++.++.|+++||.+||++++.||||||.|+|++.+
T Consensus 58 lkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n 137 (292)
T KOG0662|consen 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN 137 (292)
T ss_pred hhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC
Confidence 589999999999999999999999999999999865 6789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
|.+||+|||+++....|-. ++....-|.+|.+|.++.+. .-|+...|+||.|||++|+.. |.|
T Consensus 138 gelkladfglarafgipvr-------cysaevvtlwyrppdvlfga---------kly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 138 GELKLADFGLARAFGIPVR-------CYSAEVVTLWYRPPDVLFGA---------KLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred CcEEecccchhhhcCCceE-------eeeceeeeeeccCcceeeee---------ehhccchHhhhcchHHHHHhhcCCC
Confidence 9999999999998765532 33445568999999998743 357889999999999999986 599
Q ss_pred CCCchHHH----HHHhcC----------------CCCCcccCC---------CCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLL----AYRRGQ----------------YDPSQHLEK---------IPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~----~~~~~~----------------~~~~~~l~~---------~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
.|.+.+.. .+.+.. |.+.+..+. ..+..-++|++++|.-+|.+|++|++++
T Consensus 202 lfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal 281 (292)
T KOG0662|consen 202 LFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL 281 (292)
T ss_pred CCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence 99765432 221111 111111110 1123568999999999999999999999
Q ss_pred HHhhcccCCCCCChh
Q 000470 210 QNYAAVVFPTYFSPF 224 (1472)
Q Consensus 210 ~~~~~~~fp~~f~~~ 224 (1472)
+| +||..|
T Consensus 282 qh-------pyf~d~ 289 (292)
T KOG0662|consen 282 QH-------PYFSDF 289 (292)
T ss_pred cC-------cccccc
Confidence 98 666553
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=271.33 Aligned_cols=193 Identities=18% Similarity=0.222 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++++...|+||||++ |+|.+++... ..+++.++..++.|++.||.|||+.||+||||||+||+++
T Consensus 57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 136 (285)
T cd05605 57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD 136 (285)
T ss_pred cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC
Confidence 579999999999999999999999999 6999887543 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||+++..... . ......|++.|+|||.+. +..++.++||||+||++|||++|.
T Consensus 137 ~~~~~~l~Dfg~~~~~~~~--~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diws~G~~l~el~~g~ 198 (285)
T cd05605 137 DYGHIRISDLGLAVEIPEG--E------TIRGRVGTVGYMAPEVVK----------NERYTFSPDWWGLGCLIYEMIEGK 198 (285)
T ss_pred CCCCEEEeeCCCceecCCC--C------ccccccCCCCccCcHHhc----------CCCCCccccchhHHHHHHHHHHCC
Confidence 9999999999988754211 0 112345788999999774 335788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
+||..... ..+...........+...+..+++||.+||+.||++|| +++++++|
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 199 SPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred CCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 99975432 11222222222234445678899999999999999999 89999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-27 Score=281.86 Aligned_cols=196 Identities=16% Similarity=0.151 Sum_probs=155.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------------------------- 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------- 37 (1472)
+||||+++++++......|+||||+. |+|.+++...
T Consensus 100 ~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (374)
T cd05106 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSD 179 (374)
T ss_pred cCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccc
Confidence 79999999999999999999999999 7999988532
Q ss_pred ---------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccc
Q 000470 38 ---------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 90 (1472)
Q Consensus 38 ---------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a 90 (1472)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla 259 (374)
T cd05106 180 TYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLA 259 (374)
T ss_pred cccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceee
Confidence 13678889999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----H
Q 000470 91 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----L 165 (1472)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~ 165 (1472)
+...... .. ....+..++..|+|||.+. ...++.++||||+||++|||++ |++||.... .
T Consensus 260 ~~~~~~~----~~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~ 324 (374)
T cd05106 260 RDIMNDS----NY-VVKGNARLPVKWMAPESIF----------DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF 324 (374)
T ss_pred eeccCCc----ce-eeccCCCCccceeCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH
Confidence 7542211 11 1122334456799999764 3467889999999999999997 898986432 2
Q ss_pred HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 166 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
......... ...+...+++++++|.+||+.||++||+++++++.++.
T Consensus 325 ~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 325 YKMVKRGYQ--MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHcccC--ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 222222222 22344456889999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-28 Score=259.50 Aligned_cols=194 Identities=18% Similarity=0.189 Sum_probs=166.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||.+..+...|++..++|+||||+. |.|+-.++....+++...+++...|+.||.|||+++||.||||.||+|++.+
T Consensus 225 ~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkD 304 (516)
T KOG0690|consen 225 CRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKD 304 (516)
T ss_pred ccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|++||+|||++|... .+.....+.||||.|+|||++. +..|+.++|.|.+|+++|||++|+.|
T Consensus 305 GHIKitDFGLCKE~I-------~~g~t~kTFCGTPEYLAPEVle----------DnDYgraVDWWG~GVVMYEMmCGRLP 367 (516)
T KOG0690|consen 305 GHIKITDFGLCKEEI-------KYGDTTKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGVGVVMYEMMCGRLP 367 (516)
T ss_pred CceEeeecccchhcc-------cccceeccccCChhhcCchhhc----------cccccceeehhhhhHHHHHHHhccCc
Confidence 999999999998542 2233457889999999999775 55789999999999999999999888
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|...+..++..-..-....+|...+++++.|+..+|.+||.+|. .|.|+.+|
T Consensus 368 Fyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 368 FYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 86554443333233333446777788999999999999999998 46777777
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=266.49 Aligned_cols=200 Identities=18% Similarity=0.166 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|++|||++ ++|.+++...+.+++..++.++.|++.||+|||++|++||||||+||+++++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~ 142 (267)
T cd06628 63 LQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK 142 (267)
T ss_pred cCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCC
Confidence 579999999999999999999999998 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++......... ..........++..|+|||.+. +..++.++|+||+||++|+|++|+.|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p 211 (267)
T cd06628 143 GGIKISDFGISKKLEANSLST-KTNGARPSLQGSVFWMAPEVVK----------QTSYTRKADIWSLGCLVVEMLTGKHP 211 (267)
T ss_pred CCEEecccCCCcccccccccC-CccccccccCCCcCccChhHhc----------cCCCCchhhhHHHHHHHHHHhhCCCC
Confidence 999999999987653211110 0111112334678899999764 33567889999999999999999888
Q ss_pred CCchH-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+........+.++...+..++++|.+||+.||.+||++.|+++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 212 FPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 86432 22222221222233455567889999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=265.66 Aligned_cols=197 Identities=19% Similarity=0.172 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++..+...|+||||++ ++|.+++... ..+++.++..++.|++.||.|||++||+|||||
T Consensus 53 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 132 (262)
T cd00192 53 LGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLA 132 (262)
T ss_pred cCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccC
Confidence 579999999999999999999999997 7999999875 679999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.+........ ........++..|+|||.+. ...++.++||||+||++
T Consensus 133 p~nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il 197 (262)
T cd00192 133 ARNCLVGEDLVVKISDFGLSRDVYDDDY-----YRKKTGGKLPIRWMAPESLK----------DGIFTSKSDVWSFGVLL 197 (262)
T ss_pred cceEEECCCCcEEEcccccccccccccc-----cccccCCCcCccccCHHHhc----------cCCcchhhccHHHHHHH
Confidence 9999999999999999999876543211 01112334577899999764 23678899999999999
Q ss_pred HHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|||++ |.+||.......+..... ......+...+..+.+++.+||..||++||+++|+++++
T Consensus 198 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 198 WEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 99999 599987554332221111 222234445578899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=291.76 Aligned_cols=196 Identities=22% Similarity=0.225 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCC--------eEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDK--------AAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--------~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++|+||++++..+.... .+++||||+. |+|.+++..+ ..+++.++..++.|++.||.|||++||+||
T Consensus 88 ~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHr 167 (496)
T PTZ00283 88 CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHR 167 (496)
T ss_pred CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 57999999988775432 4789999999 7999998653 458999999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+|||++.++.+||+|||+++........ ....+.+|++.|+|||.+. +..++.++||||||
T Consensus 168 DLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~----------~~~~s~k~DVwSlG 232 (496)
T PTZ00283 168 DIKSANILLCSNGLVKLGDFGFSKMYAATVSD-----DVGRTFCGTPYYVAPEIWR----------RKPYSKKADMFSLG 232 (496)
T ss_pred CCCHHHEEEeCCCCEEEEecccCeeccccccc-----cccccccCCcceeCHHHhC----------CCCCCcHHHHHHHH
Confidence 99999999999999999999998755322111 1123456899999999875 34678999999999
Q ss_pred HHHHHHHhCCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 148 CVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|||++|++||............. .....++...++.+++++.+||+.||++||++.++++|
T Consensus 233 vilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 233 VLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 99999999999997655443322111 11223455667899999999999999999999999998
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=256.99 Aligned_cols=264 Identities=20% Similarity=0.304 Sum_probs=212.8
Q ss_pred CCCCccccc-ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWRPRG-ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~p~G-~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
...+|+-.+ ..-..+++|..+|.++.|++++.+++||+.||.||+|+..-.. ....+..|...|.+++|+|+.
T Consensus 119 EFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn------Vk~~~ahh~eaIRdlafSpnD 192 (464)
T KOG0284|consen 119 EFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN------VKIIQAHHAEAIRDLAFSPND 192 (464)
T ss_pred cEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh------hHHhhHhhhhhhheeccCCCC
Confidence 456787533 2335678999999999999999999999999999999976422 111223454789999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..|++|++||+|+|||....+ .-+ ....||.-+.++.|+|. ...+++++.|..|++||.|+++
T Consensus 193 skF~t~SdDg~ikiWdf~~~k-------------ee~-vL~GHgwdVksvdWHP~---kgLiasgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPK-------------EER-VLRGHGWDVKSVDWHPT---KGLIASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred ceeEEecCCCeEEEEeccCCc-------------hhh-eeccCCCCcceeccCCc---cceeEEccCCceeEeecCCCcc
Confidence 999999999999999986311 111 12578888999999998 5599999999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
++.++.. |...|+.+.|.|+++||++++.|..++++|+|..+.+..++. |...++++.| +|... .++.
T Consensus 256 cl~tlh~--HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-Hkkdv~~~~W-hP~~~--------~lft 323 (464)
T KOG0284|consen 256 CLATLHG--HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-HKKDVTSLTW-HPLNE--------SLFT 323 (464)
T ss_pred hhhhhhh--ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-chhhheeecc-ccccc--------ccee
Confidence 9999876 889999999999999999999999999999998877777664 6678999999 88653 4788
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.||.|..|.+...+.+.. ...+|...|++++
T Consensus 324 sgg~Dgsvvh~~v~~~~p~~~----------------------------------------------i~~AHd~~iwsl~ 357 (464)
T KOG0284|consen 324 SGGSDGSVVHWVVGLEEPLGE----------------------------------------------IPPAHDGEIWSLA 357 (464)
T ss_pred eccCCCceEEEeccccccccC----------------------------------------------CCcccccceeeee
Confidence 888999999999862111100 1245677999999
Q ss_pred cCCCCc-EEEccCCCeEEEEeCCCCCC
Q 000470 1359 PLPGGD-LLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1359 ~~p~g~-llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
|+|=|. |+||+.|+++|||.-..+..
T Consensus 358 ~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 358 YHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred ccccceeEeecCCCcceeeeccCCCCC
Confidence 999995 55999999999998766543
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=264.36 Aligned_cols=198 Identities=16% Similarity=0.113 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++... +.+++.+++.++.|++.||.|||++||+||||||+||+++.
T Consensus 50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~ 129 (252)
T cd05084 50 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE 129 (252)
T ss_pred CCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC
Confidence 589999999999999999999999998 6999999764 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.+..... ............+..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 130 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~e~~~~~~ 194 (252)
T cd05084 130 KNVLKISDFGMSREEED-----GVYASTGGMKQIPVKWTAPEALN----------YGRYSSESDVWSFGILLWEAFSLGA 194 (252)
T ss_pred CCcEEECccccCccccc-----ccccccCCCCCCceeecCchhhc----------CCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999998764321 11111111112245699999764 3357889999999999999998 78
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||.......... .........+...+..+.+|+.+||+.||++||++.++++.+.
T Consensus 195 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 195 VPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 8885332222111 1111122344556788999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=272.22 Aligned_cols=194 Identities=14% Similarity=0.057 Sum_probs=153.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++......|++|||++ ++|.+++...+ .+++..++.++.|++.||+|||++||
T Consensus 61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i 140 (297)
T cd05089 61 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF 140 (297)
T ss_pred CCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 69999999999999999999999998 79999996532 47889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||++...... ........+..|+|||.+. ...++.++|||
T Consensus 141 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dvw 202 (297)
T cd05089 141 IHRDLAARNVLVGENLASKIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLN----------YSVYTTKSDVW 202 (297)
T ss_pred ccCcCCcceEEECCCCeEEECCcCCCccccce--------eccCCCCcCccccCchhhc----------cCCCCchhhHH
Confidence 99999999999999999999999987532110 0001112245699999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||++|||++ |.+||........ ...........+...+..+++||.+||+.+|.+||+++++++.+.
T Consensus 203 SlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 203 SFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 99999999997 8888865433222 111111122244556788999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=251.45 Aligned_cols=194 Identities=14% Similarity=0.116 Sum_probs=156.0
Q ss_pred CCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccCC
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~~ 80 (1472)
+|.||+.+++|.++...++.||.|..-+..+++. .+.++|.-+-.+...+++||.||-+ +||+|||+||+|||++..|
T Consensus 150 cpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G 229 (391)
T KOG0983|consen 150 CPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 229 (391)
T ss_pred CCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC
Confidence 6999999999999999999999998655555543 3458999999999999999999996 6999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||||||++..... +.....+.|.+.|||||++... ....|+-++||||||++++||.||+.||
T Consensus 230 niKlCDFGIsGrlvd--------SkAhtrsAGC~~YMaPERidp~-------~~~kYDiRaDVWSlGITlveLaTg~yPy 294 (391)
T KOG0983|consen 230 NIKLCDFGISGRLVD--------SKAHTRSAGCAAYMAPERIDPP-------DKPKYDIRADVWSLGITLVELATGQYPY 294 (391)
T ss_pred CEEeecccccceeec--------ccccccccCCccccCccccCCC-------CCCccchhhhhhhhccchhhhhcccCCC
Confidence 999999999865521 1122445678899999998632 2457899999999999999999999999
Q ss_pred Cch--HHHHHHhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELS--HLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~--~~~~~~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+. ++..+.+......+.++. ..++.+++|+..||.+|+.+||...++|+|
T Consensus 295 ~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 295 KGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 763 222222211121122332 478999999999999999999999999998
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=265.40 Aligned_cols=194 Identities=19% Similarity=0.160 Sum_probs=158.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|+||||++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~ 135 (256)
T cd08529 56 LDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD 135 (256)
T ss_pred cCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe
Confidence 579999999999999999999999998 6999999763 5689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++...... .......+++.|+|||.+. ...++.++|+|||||++++|++|+
T Consensus 136 ~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 136 AYDNVKIGDLGVAKLLSDNT-------NFANTIVGTPYYLSPELCE----------DKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred CCCCEEEcccccceeccCcc-------chhhccccCccccCHHHhc----------CCCCCCccchHHHHHHHHHHHhCC
Confidence 99999999999887553211 1123445778899999765 335678999999999999999999
Q ss_pred CCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||......... ..........+...+..+.++|.+||+.+|++||++.++++|
T Consensus 199 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 199 HPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 898655432221 111111222333567889999999999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=266.71 Aligned_cols=198 Identities=21% Similarity=0.166 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+..+++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 63 ~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~ 142 (267)
T cd06646 63 CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN 142 (267)
T ss_pred cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 479999999999999999999999999 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++........ .....++..|+|||.+... ....++.++|+||+||++|||++|.+|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~-------~~~~~~~~~Dvws~G~il~el~~g~~p 208 (267)
T cd06646 143 GDVKLADFGVAAKITATIAK-------RKSFIGTPYWMAPEVAAVE-------KNGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred CCEEECcCccceeecccccc-------cCccccCccccCHhHcccc-------cCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998755211100 1123467789999977421 133567899999999999999999877
Q ss_pred CCchH-HHHHH---hcCCCCC-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 160 FELSH-LLAYR---RGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 160 f~~~~-~~~~~---~~~~~~~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|.... ..... .....+. .......+..+++||.+||..||++||+++++++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 209 MFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 74322 21111 1111111 111123467899999999999999999999999884
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=268.73 Aligned_cols=192 Identities=17% Similarity=0.209 Sum_probs=159.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++++++.+...|+||||+. |+|.+++...+.+++.+++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 55 ~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~ 134 (278)
T cd05606 55 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 134 (278)
T ss_pred CCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC
Confidence 69999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.++...... .....|+..|+|||.+.. +..++.++||||+||++|||++|..||
T Consensus 135 ~~kl~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~s~G~~l~~l~~g~~p~ 196 (278)
T cd05606 135 HVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQK---------GVAYDSSADWFSLGCMLFKLLRGHSPF 196 (278)
T ss_pred CEEEccCcCccccCccC---------CcCcCCCcCCcCcHHhcC---------CCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 99999999886542111 123457889999997641 235788999999999999999999898
Q ss_pred Cch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ...............++...+..+.++|.+||..+|.+|| ++.++++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 197 RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 644 2222222222223345556678999999999999999999 99999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=267.00 Aligned_cols=197 Identities=19% Similarity=0.159 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|++|||++ ++|.+++...+.+++.+++.++.|++.||+|||++||+|+||||+||+++.+
T Consensus 63 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~ 142 (267)
T cd06645 63 CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN 142 (267)
T ss_pred CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... .....|+..|+|||.+... ....++.++|+||+||++|+|++|.+|
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~DvwSlG~il~~l~~~~~p 208 (267)
T cd06645 143 GHVKLADFGVSAQITATIAK-------RKSFIGTPYWMAPEVAAVE-------RKGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred CCEEECcceeeeEccCcccc-------cccccCcccccChhhhccc-------cCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence 99999999987654211110 1223467889999987421 234578899999999999999999777
Q ss_pred CCc-hHHH---HHHhcCCCCCccc-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FEL-SHLL---AYRRGQYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~-~~~~---~~~~~~~~~~~~l-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.. .... ........+.... ....+..++++|.+||..||++||+++++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 209 MFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 743 2211 1222222221111 11245679999999999999999999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=267.69 Aligned_cols=198 Identities=15% Similarity=0.099 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||
T Consensus 64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i 143 (280)
T cd05092 64 LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF 143 (280)
T ss_pred CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 579999999999999999999999999 6999998753 247899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||+++++.++|+|||+++...... .........+++.|+|||.+. +..++.++|||
T Consensus 144 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 208 (280)
T cd05092 144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRTMLPIRWMPPESIL----------YRKFTTESDIW 208 (280)
T ss_pred ecccccHhhEEEcCCCCEEECCCCceeEcCCCc-----eeecCCCccccccccCHHHhc----------cCCcCchhhHH
Confidence 999999999999999999999999887542111 111112223457799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchH-HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 145 AVGCVIAELFL-EVPFFELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||||++|||++ |.+||.... ...+...........+...++.+.+||.+||+.||.+||+++|+++.+.
T Consensus 209 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 209 SFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 99999999998 788885332 2222111111112233455678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=266.32 Aligned_cols=197 Identities=14% Similarity=0.057 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++.+++.++.||+.||+|||++|++||||||+|||++.
T Consensus 63 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~ 142 (266)
T cd05064 63 FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS 142 (266)
T ss_pred CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC
Confidence 579999999999999999999999999 6999998764 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++++|||.+...... .........++..|+|||.+. ...++.++||||+||++||+++ |.
T Consensus 143 ~~~~~l~dfg~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~ell~~g~ 206 (266)
T cd05064 143 DLVCKISGFRRLQEDKSE------AIYTTMSGKSPVLWAAPEAIQ----------YHHFSSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred CCcEEECCCccccccccc------chhcccCCCCceeecCHHHHh----------hCCccchhHHHHHHHHHHHHhcCCC
Confidence 999999999976542110 001111233456799999764 3467889999999999999875 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||.......... .........+...+..+.+++.+||+.+|++||+++|+++.+.
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 207 RPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 8886433222111 1111112234556778999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=280.18 Aligned_cols=196 Identities=13% Similarity=0.149 Sum_probs=155.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP------------------------------------------ 38 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~------------------------------------------ 38 (1472)
.||||+++++++..+...|+||||++ |+|.+++..+.
T Consensus 97 ~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (375)
T cd05104 97 NHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVS 176 (375)
T ss_pred CCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcc
Confidence 69999999999999999999999999 79999986421
Q ss_pred ---------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEE
Q 000470 39 ---------------------------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 85 (1472)
Q Consensus 39 ---------------------------------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~ 85 (1472)
.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~ 256 (375)
T cd05104 177 YVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKIC 256 (375)
T ss_pred cccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEe
Confidence 36788899999999999999999999999999999999999999999
Q ss_pred eccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCch-
Q 000470 86 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELS- 163 (1472)
Q Consensus 86 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~- 163 (1472)
|||+++....... . ....+..++..|+|||.+. +..++.++|||||||++|||++ |.+||...
T Consensus 257 DfG~a~~~~~~~~----~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 257 DFGLARDIRNDSN----Y-VVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred cCccceeccCccc----c-cccCCCCCCcceeChhHhc----------CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999875422110 0 1112233456799999764 3467889999999999999998 78888542
Q ss_pred ---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 164 ---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 164 ---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
...+....... ...+...+.++++||.+||+.||++||++.|+++.++.
T Consensus 322 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 322 VDSKFYKMIKEGYR--MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred chHHHHHHHHhCcc--CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 22223222222 12334556789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=268.76 Aligned_cols=198 Identities=14% Similarity=0.098 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
++||||+++++++.+....++++||+. ++|.+++..+ ..+++.++..++.|++.||+|||++|
T Consensus 65 l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g 144 (283)
T cd05091 65 LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH 144 (283)
T ss_pred CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999 6999998532 34788899999999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+||+++.++.+||+|||+++...... .........+++.|+|||.+. ...++.++||
T Consensus 145 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv 209 (283)
T cd05091 145 VVHKDLATRNVLVFDKLNVKISDLGLFREVYAAD-----YYKLMGNSLLPIRWMSPEAIM----------YGKFSIDSDI 209 (283)
T ss_pred ccccccchhheEecCCCceEecccccccccccch-----heeeccCccCCccccCHHHHh----------cCCCCcchhH
Confidence 9999999999999999999999999887543211 111223444577899999764 2357889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 144 FAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||||++|||++ |.+||............ .......+...+..+.+|+.+||+.+|++||++.+++..++
T Consensus 210 ~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 210 WSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 999999999998 78888643332222111 11112234456678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=270.23 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=159.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+. ++|.+++.....+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~ 137 (290)
T cd05580 58 IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD 137 (290)
T ss_pred CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC
Confidence 479999999999999999999999996 7999999888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++..... .....+++.|+|||.+. ....+.++||||||+++|+|++|.+|
T Consensus 138 ~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p 197 (290)
T cd05580 138 GYIKITDFGFAKRVKGR----------TYTLCGTPEYLAPEIIL----------SKGYGKAVDWWALGILIYEMLAGYPP 197 (290)
T ss_pred CCEEEeeCCCccccCCC----------CCCCCCCccccChhhhc----------CCCCCccccHHHHHHHHHHHHhCCCC
Confidence 99999999998765221 12335678899999764 23567889999999999999999999
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
|..................++...+..++++|.+||..||.+|+ +++|+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 198 FFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred CCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 86554332222111222334555678999999999999999999 89999988
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=266.75 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGIC 65 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIv 65 (1472)
++||||+++++++..+...|+||||++ ++|.+++... ..+++.++..++.|++.||+|||++|++
T Consensus 65 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~ 144 (280)
T cd05049 65 FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFV 144 (280)
T ss_pred cCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCee
Confidence 579999999999999999999999999 6999999653 3478899999999999999999999999
Q ss_pred ecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 66 H~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||||||+||+++.++.++|+|||.++....... ...-....++..|+|||.+. ...++.++||||
T Consensus 145 h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s 209 (280)
T cd05049 145 HRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWS 209 (280)
T ss_pred ccccccceEEEcCCCeEEECCcccceecccCcc-----eecCCCCcccceecChhhhc----------cCCcchhhhHHH
Confidence 999999999999999999999999875422111 00112223467799999774 346788999999
Q ss_pred HHHHHHHHHh-CCCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 146 VGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 146 lG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|||++|||++ |..||........ ...........+...+..+++++.+||+.||++||++.|+++.+.
T Consensus 210 lG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 210 FGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 9999999998 8888743322221 111111111233456678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=267.66 Aligned_cols=198 Identities=13% Similarity=0.065 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..++...+..++.|++.||.|||+.|++||||
T Consensus 66 l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dl 145 (277)
T cd05062 66 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDL 145 (277)
T ss_pred CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCc
Confidence 579999999999999999999999999 6999998652 12567888999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||++++++.++|+|||+++....... ........++..|+|||.+. ...++.++|||||||+
T Consensus 146 kp~Nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~ 210 (277)
T cd05062 146 AARNCMVAEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVV 210 (277)
T ss_pred chheEEEcCCCCEEECCCCCccccCCcce-----eecCCCCccCHhhcChhHhh----------cCCcCchhHHHHHHHH
Confidence 99999999999999999998875422110 00011223466799999764 3457889999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 150 IAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|||++ |.+||........... ........+...+..+++++.+||+.||++||++.|+++++.
T Consensus 211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 211 LWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 999999 5888865443332211 111112234455678999999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=277.43 Aligned_cols=190 Identities=17% Similarity=0.223 Sum_probs=160.5
Q ss_pred CCCCCcceeeEEEEeCC--eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK--AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvH~DLKpeNIL 75 (1472)
|+||||++||.++.+.. .+.+|+|++. |+|..|+++.+.++...++.|++|||+||.|||++. |+|||||.+||+
T Consensus 98 L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIF 177 (632)
T KOG0584|consen 98 LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIF 177 (632)
T ss_pred CCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEE
Confidence 78999999999998755 5899999999 899999999889999999999999999999999985 999999999999
Q ss_pred EccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 76 VTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 76 v~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|+.. |.|||+|+|+|...... ......|||.|||||++. ..|+..+||||||+++.||+
T Consensus 178 inG~~G~VKIGDLGLAtl~r~s---------~aksvIGTPEFMAPEmYE-----------E~YnE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 178 VNGNLGEVKIGDLGLATLLRKS---------HAKSVIGTPEFMAPEMYE-----------ENYNELVDVYAFGMCMLEMV 237 (632)
T ss_pred EcCCcCceeecchhHHHHhhcc---------ccceeccCccccChHHHh-----------hhcchhhhhhhhhHHHHHHH
Confidence 9864 89999999999765321 113357999999999763 47899999999999999999
Q ss_pred hCCCCCCc-hHH-HHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 155 LEVPFFEL-SHL-LAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 155 tg~~pf~~-~~~-~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+..||.. ... .-|++-... .+..+.++.++++++||.+||.. .++|+|+.|+|+|
T Consensus 238 T~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 238 TSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 99888853 222 233332222 23357788899999999999999 9999999999998
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=264.98 Aligned_cols=198 Identities=15% Similarity=0.109 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++..+++++.|++.||.|||++|++||||||+||+++
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~ 138 (263)
T cd05052 59 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 138 (263)
T ss_pred CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 579999999999999999999999998 6999998653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.+||+|||.+........ . .......+..|+|||.+. +..++.++|||||||++|||++ |
T Consensus 139 ~~~~~kl~df~~~~~~~~~~~-----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 139 ENHLVKVADFGLSRLMTGDTY-----T-AHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred CCCcEEeCCCcccccccccee-----e-ccCCCCCccccCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCC
Confidence 999999999999875422110 0 001122345699999764 3467889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+||.......... .........+...+..+.++|.+||+.||++||++.++++.+..
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 203 MSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 88886544332211 11112223445567889999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=263.46 Aligned_cols=298 Identities=15% Similarity=0.265 Sum_probs=239.9
Q ss_pred cccceeeeccccccceeEEEE-cCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEE
Q 000470 1046 PRGILVAHLQEHCSAVNEIAI-SHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1124 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~laf-spd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~ 1124 (1472)
-+++++.++-|..+.|..++| .|+.+++|.|++.+.+|++++.++.+ ..+.+|...|.++.....|..|++|
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c-------~ii~GH~e~vlSL~~~~~g~llat~ 383 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC-------QIIPGHTEAVLSLDVWSSGDLLATG 383 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce-------EEEeCchhheeeeeecccCcEEEEe
Confidence 357888999999999999998 56778999999999999999988762 3788999999999966677899999
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc---
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW--- 1201 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~--- 1201 (1472)
|+|.++++|+++... .....+.. ...|...+.+++++....+ +|++++.|+++++|+++..+...
T Consensus 384 sKD~svilWr~~~~~---------~~~~~~a~-~~gH~~svgava~~~~~as--ffvsvS~D~tlK~W~l~~s~~~~~~~ 451 (775)
T KOG0319|consen 384 SKDKSVILWRLNNNC---------SKSLCVAQ-ANGHTNSVGAVAGSKLGAS--FFVSVSQDCTLKLWDLPKSKETAFPI 451 (775)
T ss_pred cCCceEEEEEecCCc---------chhhhhhh-hcccccccceeeecccCcc--EEEEecCCceEEEecCCCcccccccc
Confidence 999999999995211 11111222 2234555666677666544 99999999999999998722111
Q ss_pred ee----ecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEE
Q 000470 1202 TL----KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1202 ~l----~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l 1277 (1472)
.+ ....|...|+|++++|+...++|||.|.+.++|++........+. +|..++.++.| +|..+ .+
T Consensus 452 ~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLs-GH~RGvw~V~F-s~~dq---------~l 520 (775)
T KOG0319|consen 452 VLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLS-GHTRGVWCVSF-SKNDQ---------LL 520 (775)
T ss_pred eehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEee-CCccceEEEEe-ccccc---------ee
Confidence 11 223488899999999999999999999999999999666666655 47788999999 77655 79
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEe
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
+++++|.+|+||.++++.|.++|.. |...|-.+
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eG-----------------------------------------------H~~aVlra 553 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEG-----------------------------------------------HTSAVLRA 553 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecC-----------------------------------------------ccceeEee
Confidence 9999999999999999999999863 33356666
Q ss_pred ccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhc
Q 000470 1358 LPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1436 (1472)
Q Consensus 1358 ~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1436 (1472)
.|-.+| .|++||.||-|++|++++.++...+
T Consensus 554 ~F~~~~~qliS~~adGliKlWnikt~eC~~tl------------------------------------------------ 585 (775)
T KOG0319|consen 554 SFIRNGKQLISAGADGLIKLWNIKTNECEMTL------------------------------------------------ 585 (775)
T ss_pred eeeeCCcEEEeccCCCcEEEEeccchhhhhhh------------------------------------------------
Confidence 776666 8999999999999999988775422
Q ss_pred CCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1437 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1437 ~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..|.|.|++++ .++...|++||+.||.|.+|+
T Consensus 586 ---D~H~DrvWaL~-~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 586 ---DAHNDRVWALS-VSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ---hhccceeEEEe-ecCccceeEecCCCeEEEEee
Confidence 24999999996 788888999999999999996
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=263.55 Aligned_cols=196 Identities=14% Similarity=0.076 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++. ...++||||++ |+|.+++.....+++..+..++.|++.||+|||++||+||||||.||+++.+
T Consensus 53 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~ 131 (257)
T cd05116 53 LDNPYIVRMIGICEA-ESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ 131 (257)
T ss_pred CCCCCcceEEEEEcC-CCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC
Confidence 579999999998864 56799999999 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
+.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.+
T Consensus 132 ~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~ 197 (257)
T cd05116 132 HYAKISDFGLSKALGADEN----YYKAKTHGKWPVKWYAPECMN----------YYKFSSKSDVWSFGVLMWEAFSYGQK 197 (257)
T ss_pred CeEEECCCccccccCCCCC----eeeecCCCCCCccccCHhHhc----------cCCcCchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999876532211 000111223356799999764 2357789999999999999998 898
Q ss_pred CCCchHH---HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 159 FFELSHL---LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 159 pf~~~~~---~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||..... ....... .....+...+++++++|.+||+.||++||+++++.+.++
T Consensus 198 p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 198 PYKGMKGNEVTQMIESG--ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 9864322 2222211 122345566789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=272.85 Aligned_cols=195 Identities=25% Similarity=0.335 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+|+||++++|.+++.. ++.+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~ 135 (284)
T cd07839 56 LKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135 (284)
T ss_pred cCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence 579999999999999999999999999999998864 5669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC-C
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-P 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~ 158 (1472)
+.++|+|||.++....+.. .+....++..|+|||.+.+ ...++.++||||+||++|||++|. |
T Consensus 136 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~tg~~p 199 (284)
T cd07839 136 GELKLADFGLARAFGIPVR-------CYSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRP 199 (284)
T ss_pred CcEEECccchhhccCCCCC-------CcCCCccccCCcChHHHhC---------CcccCcHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999875532211 1123346788999998742 234688999999999999999985 4
Q ss_pred CCCchHHHHH----Hhc----------------CCCCCc---------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLLAY----RRG----------------QYDPSQ---------HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~~~----~~~----------------~~~~~~---------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
+|......+. .+. .+.... ......++.+++||.+||+.||.+|||++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il 279 (284)
T cd07839 200 LFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL 279 (284)
T ss_pred CcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHh
Confidence 4543322111 000 000000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 280 ~h 281 (284)
T cd07839 280 QH 281 (284)
T ss_pred cC
Confidence 98
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=270.67 Aligned_cols=198 Identities=15% Similarity=0.151 Sum_probs=156.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----------------PPFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----------------~~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|++|||+. |+|.+++.. ...+++.++..++.|++.||+|||++||
T Consensus 74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i 153 (293)
T cd05053 74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC 153 (293)
T ss_pred CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 79999999999999999999999998 699999853 2358899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++...... .........++..|+|||.+. +..++.++|||
T Consensus 154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 218 (293)
T cd05053 154 IHRDLAARNVLVTEDHVMKIADFGLARDIHHID-----YYRKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 218 (293)
T ss_pred cccccceeeEEEcCCCeEEeCcccccccccccc-----ceeccCCCCCCccccCHHHhc----------cCCcCccccee
Confidence 999999999999999999999999987653211 111111223456799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||........... ........+...+..+.+|+.+||..||++|||+.|+++++..
T Consensus 219 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 219 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred ehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 99999999997 7888865433222211 1111122334456789999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=271.04 Aligned_cols=204 Identities=20% Similarity=0.165 Sum_probs=172.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+..|.||++|..|.+++.+|+.||-|- |.|+..++.++.+++..+++++..+++|++|||++|||.|||||||++++.+
T Consensus 477 ~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~ 556 (732)
T KOG0614|consen 477 CRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR 556 (732)
T ss_pred cCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC
Confidence 457899999999999999999999998 6999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|++||.|||++|.+..... ..|.|||+.|.|||++.+. ..+.++|.||||+++|||++|.||
T Consensus 557 Gy~KLVDFGFAKki~~g~K--------TwTFcGTpEYVAPEIILnK----------GHD~avDyWaLGIli~ELL~G~pP 618 (732)
T KOG0614|consen 557 GYLKLVDFGFAKKIGSGRK--------TWTFCGTPEYVAPEIILNK----------GHDRAVDYWALGILIYELLTGSPP 618 (732)
T ss_pred CceEEeehhhHHHhccCCc--------eeeecCCcccccchhhhcc----------CcchhhHHHHHHHHHHHHHcCCCC
Confidence 9999999999998743322 3578999999999998854 346789999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHHhhcccCCCCCChhhhhhh
Q 000470 160 FELSHLLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNYAAVVFPTYFSPFLHNFY 229 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~~~~~~fp~~f~~~l~~~~ 229 (1472)
|...+..+....... ....+|........+||+++...+|.+|.. +.++-+| .||..|-..-+
T Consensus 619 Fs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdwegl 688 (732)
T KOG0614|consen 619 FSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDWEGL 688 (732)
T ss_pred CCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCChhhh
Confidence 987665443322222 223466777788999999999999999985 7888888 45555444433
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=275.26 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||+. |+|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 137 (331)
T cd05597 58 GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137 (331)
T ss_pred CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence 479999999999999999999999998 699999976 456999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||++........ .......|++.|+|||++..... ....++.++||||+||++|||++|+.
T Consensus 138 ~~~~kl~Dfg~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~~~~~DiwslG~~l~el~~g~~ 206 (331)
T cd05597 138 NGHIRLADFGSCLRLLADGT------VQSNVAVGTPDYISPEILQAMED-----GKGRYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred CCCEEEEECCceeecCCCCC------ccccceeccccccCHHHHhhccc-----cccCCCCcceeehhhhHHHHHhhCCC
Confidence 99999999998865422111 01122357889999998853211 12457889999999999999999998
Q ss_pred CCCchHHHHH----HhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLAY----RRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~----~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||........ ...... ..+......++.+++||.+||..++++ |++++++++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 207 PFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9865443221 111111 111112235678999999999764443 7899999999
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=264.69 Aligned_cols=188 Identities=24% Similarity=0.284 Sum_probs=156.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++.+..+...|+||||++ ++|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++
T Consensus 67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK 146 (267)
T ss_pred cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence 69999999999999999999999998 69999998877899999999999999999999999999999999999999998
Q ss_pred -cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 81 -WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 81 -~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
.++|+|||.++..... ....++..|+|||.+. +..++.++||||+||++|||++|..|
T Consensus 147 ~~~~l~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p 205 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP-----------SCYDGTLDYFSPEKIK----------GHNYDVSFDWWAVGVLTYELLTGKHP 205 (267)
T ss_pred CeEEEecCccceecCCC-----------ccCCCCCcccChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999987654211 1224678899999774 33567899999999999999999989
Q ss_pred CCchH-----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-HHHHHHH
Q 000470 160 FELSH-----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-AESYLQN 211 (1472)
Q Consensus 160 f~~~~-----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 211 (1472)
|.... ...+.... .......+..++.+++||.+||+.||.+|++ ++|+|+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 206 FKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred CCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 86332 12222222 2222344467789999999999999999996 6999998
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=231.82 Aligned_cols=296 Identities=13% Similarity=0.203 Sum_probs=224.6
Q ss_pred eeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
++..+++|++.|..++|+|. |..|||||.|..|+||+...+. ..+.+.. .-.+|...|.+++|+|.|++||+||.|.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~-s~~ck~v-ld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD-SWTCKTV-LDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC-cEEEEEe-ccccchheeeeeeecCCCcEEEEeeccc
Confidence 56889999999999999998 8899999999999999987522 2222221 1235778899999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC---ccceeec
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS---NTWTLKA 1205 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~---~~~~l~~ 1205 (1472)
++-||.-.. ... .+......|...|.+++|+++ |++|++++.|..|.+|.+..+. +...|+.
T Consensus 84 t~~Iw~k~~-----------~ef-ecv~~lEGHEnEVK~Vaws~s---G~~LATCSRDKSVWiWe~deddEfec~aVL~~ 148 (312)
T KOG0645|consen 84 TVVIWKKED-----------GEF-ECVATLEGHENEVKCVAWSAS---GNYLATCSRDKSVWIWEIDEDDEFECIAVLQE 148 (312)
T ss_pred eEEEeecCC-----------Cce-eEEeeeeccccceeEEEEcCC---CCEEEEeeCCCeEEEEEecCCCcEEEEeeecc
Confidence 999996541 111 122233456778999999998 8899999999999999998543 4455655
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECC---CCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLR---FLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr---~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
|...|.-+.|+|....|++++.|.+|++|+-. ...++.++.. +...+.++.| +|.+. .+++++.
T Consensus 149 --HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F-~~~G~---------rl~s~sd 215 (312)
T KOG0645|consen 149 --HTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAF-DNIGS---------RLVSCSD 215 (312)
T ss_pred --ccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEe-cCCCc---------eEEEecC
Confidence 88899999999999999999999999999865 2345566554 4457888888 66554 7899999
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+.|+||-..+. +. .-|...++.+.|. +
T Consensus 216 D~tv~Iw~~~~~-----~~----------------------------------------------~~~sr~~Y~v~W~-~ 243 (312)
T KOG0645|consen 216 DGTVSIWRLYTD-----LS----------------------------------------------GMHSRALYDVPWD-N 243 (312)
T ss_pred CcceEeeeeccC-----cc----------------------------------------------hhcccceEeeeec-c
Confidence 999999986521 00 1122368888997 8
Q ss_pred CcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCC
Q 000470 1363 GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1442 (1472)
Q Consensus 1363 g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1442 (1472)
|.|+|||.|+.||++--.. ++. .+.|. + .......|
T Consensus 244 ~~IaS~ggD~~i~lf~~s~--------~~d------~p~~~------l------------------------~~~~~~aH 279 (312)
T KOG0645|consen 244 GVIASGGGDDAIRLFKESD--------SPD------EPSWN------L------------------------LAKKEGAH 279 (312)
T ss_pred cceEeccCCCEEEEEEecC--------CCC------CchHH------H------------------------HHhhhccc
Confidence 8999999999999997431 110 11110 0 00112359
Q ss_pred ccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000470 1443 RDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1443 ~d~I~~va~~~~~-~~~LvS~s~DG~IkVWk 1472 (1472)
...|++|+ |++. ...|+|||+||+|++|+
T Consensus 280 e~dVNsV~-w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 280 EVDVNSVQ-WNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred ccccceEE-EcCCCCCceeecCCCceEEEEE
Confidence 99999996 8885 78899999999999995
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=265.35 Aligned_cols=193 Identities=21% Similarity=0.240 Sum_probs=158.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++++...|+++||++ ++|.+++.....+++..++.++.||+.||+|||++|++|+||||+||+++.+
T Consensus 50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~ 129 (262)
T cd05572 50 CNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN 129 (262)
T ss_pred CCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC
Confidence 589999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....... .....++..|+|||.+. ...++.++|+||+||++|+|++|.+|
T Consensus 130 ~~~~l~df~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p 191 (262)
T cd05572 130 GYVKLVDFGFAKKLKSGQK--------TWTFCGTPEYVAPEIIL----------NKGYDFSVDYWSLGILLYELLTGRPP 191 (262)
T ss_pred CCEEEeeCCcccccCcccc--------cccccCCcCccChhHhc----------CCCCCChhhhhhhHHHHHHHHhCCCC
Confidence 9999999999876532210 11234577899999764 23567899999999999999999989
Q ss_pred CCchH--HHH-HHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 160 FELSH--LLA-YRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~--~~~-~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
|.... ... +..... ......+...++.++++|.+||+.||++||+ ++|+++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 192 FGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 86544 222 222111 1122334444788999999999999999999 9999998
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=267.61 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=158.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++......|+||||++ |+|.+++... +.++...+..++.||+.||.|||++||+||||
T Consensus 66 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~di 145 (288)
T cd05061 66 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 145 (288)
T ss_pred CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 579999999999999999999999999 7999999642 33567788999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||+++.++.++|+|||+++....... ........++..|+|||.+. ...++.++||||+||+
T Consensus 146 kp~nili~~~~~~~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~DvwslG~~ 210 (288)
T cd05061 146 AARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLK----------DGVFTTSSDMWSFGVV 210 (288)
T ss_pred ChheEEEcCCCcEEECcCCcccccccccc-----ccccCCCcccccccCHHHhc----------cCCCChHhHHHHHHHH
Confidence 99999999999999999998875432111 00111223456799999764 3357889999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcccCCC
Q 000470 150 IAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT 219 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fp~ 219 (1472)
+|||++ |.+||.......+..... ......+...++.+++++.+||+.||++||++.++++.++....|.
T Consensus 211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 211 LWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 999998 588886544333322111 1112233445678999999999999999999999999877665553
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=271.86 Aligned_cols=198 Identities=13% Similarity=0.102 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+ ..++++||+. |+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.
T Consensus 66 l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~ 144 (316)
T cd05108 66 VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT 144 (316)
T ss_pred CCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC
Confidence 5799999999998765 5678999999 7999999874 45889999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||+++....... .........+..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slGv~l~el~t~g~ 209 (316)
T cd05108 145 PQHVKITDFGLAKLLGADEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGS 209 (316)
T ss_pred CCcEEEccccccccccCCCc-----ceeccCCccceeecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCC
Confidence 99999999999886532211 11112233466799999764 3467889999999999999997 89
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhccc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 216 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~ 216 (1472)
+||....... ...... ....+...+..+.+++.+||+.||++||++.+++.++....
T Consensus 210 ~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 210 KPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCCCCCCHHHHHHHHhCCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9997543322 222221 11233456678999999999999999999999999866543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=275.26 Aligned_cols=200 Identities=17% Similarity=0.201 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||++ |+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~ 137 (332)
T cd05623 58 GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 137 (332)
T ss_pred CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence 479999999999999999999999998 799999976 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||+++...... ........|++.|+|||++.... .....++.++|||||||++|||++|++
T Consensus 138 ~~~~kL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwSlGvil~ell~g~~ 206 (332)
T cd05623 138 NGHIRLADFGSCLKLMEDG------TVQSSVAVGTPDYISPEILQAME-----DGKGKYGPECDWWSLGVCMYEMLYGET 206 (332)
T ss_pred CCCEEEeecchheecccCC------cceecccccCccccCHHHHhccc-----cCCCCCCCcCCEEeeHHHHHHHhcCCC
Confidence 9999999999886542111 11123346899999999875321 123467889999999999999999999
Q ss_pred CCCchHHHH-HHh---cCCC-CCcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLA-YRR---GQYD-PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~~~---~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||....... +.+ .... ..+......++.+++||.+||..++++ |++++|+++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 207 PFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 986544322 221 1111 111112345788999999999765554 6899999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=266.03 Aligned_cols=198 Identities=16% Similarity=0.114 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++||||+++++++.+....|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++|++||||||+
T Consensus 66 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~ 145 (277)
T cd05036 66 FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAAR 145 (277)
T ss_pred CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchh
Confidence 579999999999999889999999998 69999986532 4889999999999999999999999999999999
Q ss_pred CEEEccCC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 73 NVLVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 73 NILv~~~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+++..+ .+||+|||+++....... .........+..|+|||.+. +..++.++|||||||+
T Consensus 146 nil~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~i 210 (277)
T cd05036 146 NCLLTCKGPGRVAKIADFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFL----------DGIFTSKTDVWSFGVL 210 (277)
T ss_pred eEEEeccCCCcceEeccCccccccCCccc-----eecCCCCCccHhhCCHHHHh----------cCCcCchhHHHHHHHH
Confidence 99998765 599999999876521110 00011112245799999874 3457899999999999
Q ss_pred HHHHHh-CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 150 IAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|||++ |..||............. ......+...+..+.+++.+||+.+|++||++.++++|+.
T Consensus 211 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 999997 899997544333221111 1122234455678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=264.75 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+|+||++ ++|.+++.. ...+++.++..++.|++.||.|||+.||+||||||+||+++.
T Consensus 59 l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~ 138 (282)
T cd06643 59 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL 138 (282)
T ss_pred CCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc
Confidence 579999999999999999999999999 588887754 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++....... .......++..|+|||.+.... .....++.++||||+||++|||++|.+
T Consensus 139 ~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvil~el~~g~~ 206 (282)
T cd06643 139 DGDIKLADFGVSAKNTRTI-------QRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAQIEP 206 (282)
T ss_pred CCCEEEccccccccccccc-------cccccccccccccCHhhccccC-----CCCCCCCccchhhhHHHHHHHHccCCC
Confidence 9999999999876432111 1112345678899999875221 124467889999999999999999999
Q ss_pred CCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... ...... +....+...+..+++||.+||+.||.+||+++++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 207 PHHELNPMRVLLKIAKSEP-PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CccccCHHHHHHHHhhcCC-CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 986433221 212211 1222344456789999999999999999999999988
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=256.62 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++|+||++++.+|.-. ..+|+|||||..+|.+.+.. .++...++.|++|+++|++|||+.||+||||||+||
T Consensus 72 v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsni 149 (369)
T KOG0665|consen 72 VNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNI 149 (369)
T ss_pred hcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccc
Confidence 5899999999999544 36899999999999999884 378899999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++..++.+||.|||+++.... .+.......+..|.|||++.+ ..|.+.+||||+||+++||+
T Consensus 150 vv~~~~~lKi~dfg~ar~e~~--------~~~mtpyVvtRyyrapevil~----------~~~ke~vdiwSvGci~gEli 211 (369)
T KOG0665|consen 150 VVNSDCTLKILDFGLARTEDT--------DFMMTPYVVTRYYRAPEVILG----------MGYKENVDIWSVGCIMGELI 211 (369)
T ss_pred eecchhheeeccchhhcccCc--------ccccCchhheeeccCchheec----------cCCcccchhhhhhhHHHHHh
Confidence 999999999999999875421 133345566888999998873 34788999999999999999
Q ss_pred hCCCCCCchHHH----------------------H----HHhc--C---CC-----CCc------ccCCCCCHHHHHHHH
Q 000470 155 LEVPFFELSHLL----------------------A----YRRG--Q---YD-----PSQ------HLEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~pf~~~~~~----------------------~----~~~~--~---~~-----~~~------~l~~~~~~~l~~LI~ 192 (1472)
+|+..|.+.... . |.+. . .. +.. +-++.....+++|+.
T Consensus 212 ~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~ 291 (369)
T KOG0665|consen 212 LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLS 291 (369)
T ss_pred hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHH
Confidence 999888643210 0 0000 0 00 000 111233456899999
Q ss_pred HhcccCcCCCCCHHHHHHHhhcccCCCCCChh
Q 000470 193 HMIQLEPELRFSAESYLQNYAAVVFPTYFSPF 224 (1472)
Q Consensus 193 ~mL~~dP~~Rpsa~elL~~~~~~~fp~~f~~~ 224 (1472)
+||..||++|.+++++|+| +|+.-|
T Consensus 292 ~MLvi~pe~Risv~daL~H-------PY~~vw 316 (369)
T KOG0665|consen 292 KMLVIDPEKRISVDDALRH-------PYIKVW 316 (369)
T ss_pred HhhccChhhcccHHHHhcC-------Ceeeee
Confidence 9999999999999999999 666543
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=261.40 Aligned_cols=197 Identities=17% Similarity=0.120 Sum_probs=155.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++. ...|+||||+. |+|.+++...+.+++.++..++.|++.||+|||++|++||||||+|||++.+
T Consensus 53 l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~ 131 (257)
T cd05060 53 LDHPCIVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR 131 (257)
T ss_pred cCCCCeeeEEEEEcC-CceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC
Confidence 579999999998764 46899999998 6999999888789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 158 (1472)
+.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.+
T Consensus 132 ~~~kl~df~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~~~~~g~~ 197 (257)
T cd05060 132 HQAKISDFGMSRALGAGSD----YYRATTAGRWPLKWYAPECIN----------YGKFSSKSDVWSYGVTLWEAFSYGAK 197 (257)
T ss_pred CcEEeccccccceeecCCc----ccccccCccccccccCHHHhc----------CCCCCccchHHHHHHHHHHHHcCCCC
Confidence 9999999999876532111 000011122345799999764 3357889999999999999998 899
Q ss_pred CCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 159 FFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 159 pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||...... ....... ....+...+..++++|.+||..||++||++.++++.++.
T Consensus 198 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 198 PYGEMKGAEVIAMLESGE--RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CcccCCHHHHHHHHHcCC--cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 98643322 2222211 112334556789999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=262.66 Aligned_cols=191 Identities=19% Similarity=0.188 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||||+++++++..+...|+||||++ |+|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 56 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~ 135 (258)
T cd05078 56 LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIR 135 (258)
T ss_pred CCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEec
Confidence 579999999999999999999999999 6999999764 45899999999999999999999999999999999999987
Q ss_pred CCc--------EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 79 WNW--------LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 79 ~~~--------vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
++. ++++|||.+..... .....++..|+|||.+.. ...++.++|||||||++
T Consensus 136 ~~~~~~~~~~~~~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l 195 (258)
T cd05078 136 EEDRKTGNPPFIKLSDPGISITVLP-----------KEILLERIPWVPPECIEN---------PQNLSLAADKWSFGTTL 195 (258)
T ss_pred ccccccCCCceEEecccccccccCC-----------chhccccCCccCchhccC---------CCCCCchhhHHHHHHHH
Confidence 764 69999998754321 122346778999997742 23468899999999999
Q ss_pred HHHHhC-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLltg-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|||++| .+||........... ......++...+.++.+||.+||+.||++|||++++++.+
T Consensus 196 ~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 196 WEIFSGGDKPLSALDSQKKLQF-YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHcCCCCChhhccHHHHHHH-HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 999999 677754433221110 1111224444557899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-27 Score=273.35 Aligned_cols=199 Identities=17% Similarity=0.143 Sum_probs=162.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
.|.||+-|.+++..+.. .||+++|+| +||.+|+-. ..|.....+.|+.||++|+.|||.++|||||||..||++.++
T Consensus 446 RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~ 524 (678)
T KOG0193|consen 446 RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED 524 (678)
T ss_pred chhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC
Confidence 59999999999988877 899999997 999999863 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.|||+|||++.....- . -...+....|..+|||||++.. ....+|++.+||||||||+|||++|..|
T Consensus 525 ~kVkIgDFGLatvk~~w-~----g~~q~~qp~gsilwmAPEvIRm-------qd~nPfS~qSDVYaFGiV~YELltg~lP 592 (678)
T KOG0193|consen 525 LKVKIGDFGLATVKTRW-S----GEQQLEQPHGSLLWMAPEVIRM-------QDDNPFSFQSDVYAFGIVWYELLTGELP 592 (678)
T ss_pred CcEEEecccceeeeeee-c----cccccCCCccchhhhcHHHHhh-------cccCCCCcccchhhhhHHHHHHHhCcCC
Confidence 99999999997543211 1 1112355668899999999973 2367999999999999999999999999
Q ss_pred CCchHHHHH----HhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 160 FELSHLLAY----RRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|.......+ -++...+.. .......+++++|+..||.+++++||.+.++|..++
T Consensus 593 ysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 593 YSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred cCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 985443332 233222322 223345569999999999999999999999998754
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=270.78 Aligned_cols=195 Identities=15% Similarity=0.068 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||++++++++.++..|+||||++ |+|.+++... +.+++.+++.++.||+.||+|||++||
T Consensus 66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 145 (303)
T cd05088 66 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 145 (303)
T ss_pred CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 79999999999999999999999998 6999999643 257899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||+++....... ......+..|+|||.+. ...++.++|||
T Consensus 146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 207 (303)
T cd05088 146 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--------KTMGRLPVRWMAIESLN----------YSVYTTNSDVW 207 (303)
T ss_pred cccccchheEEecCCCcEEeCccccCcccchhhh--------cccCCCcccccCHHHHh----------ccCCcccccch
Confidence 9999999999999999999999998763211000 01112245699999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||......... ..........+...++.+.+||.+||+.+|++||+++++++++..
T Consensus 208 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 208 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred hhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 99999999998 88888644332222 111111222333456789999999999999999999999998643
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=265.24 Aligned_cols=195 Identities=14% Similarity=0.105 Sum_probs=155.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++..+..++.|++.||.|||+.||+||||
T Consensus 66 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di 145 (277)
T cd05032 66 FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDL 145 (277)
T ss_pred CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 579999999999999999999999998 7999998642 23678899999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||+++.++.+||+|||.++....... ........++..|+|||.+. ...++.++|||||||+
T Consensus 146 ~p~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~i 210 (277)
T cd05032 146 AARNCMVAEDLTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLK----------DGVFTTKSDVWSFGVV 210 (277)
T ss_pred ChheEEEcCCCCEEECCcccchhhccCcc-----cccCCCCCccccccCHHHHh----------cCCCCcccchHHHHHH
Confidence 99999999999999999999875532111 01112334567899999764 3357889999999999
Q ss_pred HHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 150 IAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 150 l~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+|||++ |.+||...... ++.... .....+...+..+.++|.+||+.+|++|||+.++++.+
T Consensus 211 l~el~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 211 LWEMATLAEQPYQGLSNEEVLKFVIDG--GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred HHHhhccCCCCCccCCHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 999998 88898644322 222211 12223444578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=278.51 Aligned_cols=191 Identities=23% Similarity=0.257 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|++++++.++|.+++..+ .+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Ni 149 (343)
T cd07878 71 MKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV 149 (343)
T ss_pred cCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhE
Confidence 5899999999988643 357999999999999888654 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||+++..... .....+++.|+|||.+.. ...++.++|||||||++|+|+
T Consensus 150 l~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~ 210 (343)
T cd07878 150 AVNEDCELRILDFGLARQADDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred EECCCCCEEEcCCccceecCCC----------cCCccccccccCchHhcC---------CccCCchhhhHhHHHHHHHHH
Confidence 9999999999999998754211 123357889999998752 235788999999999999999
Q ss_pred hCCCCCCchHHH----HHHhcCCC------------------------CCc---ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLL----AYRRGQYD------------------------PSQ---HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~----~~~~~~~~------------------------~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||...... .+...... +.. ......++.+.+||.+||+.||++||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~ 290 (343)
T cd07878 211 KGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI 290 (343)
T ss_pred HCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC
Confidence 999999643221 11110000 000 00112345689999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|+.|+++|
T Consensus 291 s~~ell~h 298 (343)
T cd07878 291 SASEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=262.97 Aligned_cols=200 Identities=18% Similarity=0.135 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+++||++ ++|.+++.....+++..+..++.|++.||+|||+.||+|+||||+||+++++
T Consensus 59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~ 138 (265)
T cd06631 59 LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN 138 (265)
T ss_pred cCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC
Confidence 579999999999999999999999998 5999999887778999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ ...........++..|+|||.+. +..++.++|+||+||++|+|++|.+|
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p 207 (265)
T cd06631 139 GIIKLIDFGCARRLAWVGLH-GTHSNMLKSMHGTPYWMAPEVIN----------ESGYGRKSDIWSIGCTVFEMATGKPP 207 (265)
T ss_pred CeEEeccchhhHhhhhcccc-ccccccccccCCCccccChhhhc----------CCCCcchhhHHHHHHHHHHHHhCCCc
Confidence 99999999988754221111 01111223345788899999764 33567899999999999999999988
Q ss_pred CCchHHH-HHHh-cCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL-AYRR-GQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~-~~~~-~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. .... ... ...+.++...+..+.++|.+||+.+|++||++.|+++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 208 LASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred cccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 8643322 1111 111 12233555667889999999999999999999999988
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=260.40 Aligned_cols=196 Identities=16% Similarity=0.099 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.+...|+||||++ |+|.+++.. .+.+++..++.++.|++.||+|||++||+||||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 56 LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS 135 (256)
T ss_pred CCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence 579999999999999999999999998 699999975 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++........ ......++..|+|||.+. ...++.++||||+||++|||++ |+
T Consensus 136 ~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 136 TGVVKVSDFGMTRYVLDDEYT------SSSGAKFPVKWSPPEVFN----------FSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred CCeEEECCCCCccccCCCcee------ccCCCCCchhhCChhhcc----------cCccchhhhhHHHHHHHHHHHcCCC
Confidence 999999999987654211100 001122345799999764 2357889999999999999999 79
Q ss_pred CCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||......... ..........+...+..+.+++.+||+.||++||+++++++.+
T Consensus 200 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 200 MPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 999654332221 1111111223445667899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=262.15 Aligned_cols=191 Identities=25% Similarity=0.313 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++++...|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~ 134 (255)
T cd08219 55 MKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT 134 (255)
T ss_pred CCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC
Confidence 589999999999999999999999998 699998864 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+.....+.. ......+++.|+|||.+. ...++.++|+||+||++|+|++|.
T Consensus 135 ~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 197 (255)
T cd08219 135 QNGKVKLGDFGSARLLTSPGA-------YACTYVGTPYYVPPEIWE----------NMPYNNKSDIWSLGCILYELCTLK 197 (255)
T ss_pred CCCcEEEcccCcceeeccccc-------ccccccCCccccCHHHHc----------cCCcCchhhhhhhchhheehhhcc
Confidence 999999999998765422111 112345678899999764 335788999999999999999999
Q ss_pred CCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||........ ..+... .++...+..+++||.+||+.||++||++.+++..
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 198 HPFQANSWKNLILKVCQGSYK---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCCHHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 89875543322 222222 2344566789999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=261.58 Aligned_cols=193 Identities=18% Similarity=0.147 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEE-EeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQ-ETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~-~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++ ..+...|++|||++ ++|.+++..++ .+++..+..++.|++.||+|||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~ 135 (256)
T cd05082 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV 135 (256)
T ss_pred CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE
Confidence 5799999999875 45668999999999 69999997643 48899999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
+.++.+||+|||+++...... ....++..|+|||.+. ...++.++|||||||++|||++
T Consensus 136 ~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~~ 195 (256)
T cd05082 136 SEDNVAKVSDFGLTKEASSTQ----------DTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSF 195 (256)
T ss_pred cCCCcEEecCCccceeccccC----------CCCccceeecCHHHHc----------cCCCCchhhhHHHHHHHHHHHhC
Confidence 999999999999887542211 1223355799999764 3357889999999999999997
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++||............ .......+...++.+++++.+||+.+|++||++.++++.+.
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 196 GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 88888654443322111 11122344556788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-26 Score=260.66 Aligned_cols=194 Identities=22% Similarity=0.249 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++.+.. +...|++|||++ ++|.+++.. ...+++.+++.++.|++.||.+||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~ 135 (257)
T cd08223 56 LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL 135 (257)
T ss_pred CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE
Confidence 579999999998865 457899999998 699999976 3458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.++....... ......+++.|+|||.+. +..++.++|+||+||++++|++|
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08223 136 TRTNIIKVGDLGIARVLENQCD-------MASTLIGTPYYMSPELFS----------NKPYNYKSDVWALGCCVYEMATL 198 (257)
T ss_pred ecCCcEEEecccceEEecccCC-------ccccccCCcCccChhHhc----------CCCCCchhhhHHHHHHHHHHHcC
Confidence 9999999999999875532211 112345678899999764 34577899999999999999999
Q ss_pred CCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++||...+........ ....+..+...++.+.++|.+||+.||++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 199 KHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 8888754433221110 111122344567889999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-26 Score=260.89 Aligned_cols=196 Identities=15% Similarity=0.108 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||++ ++|.+++..+ ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05059 56 LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE 135 (256)
T ss_pred CCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC
Confidence 579999999999999999999999998 5999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....+.. . ......++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 136 ~~~~kl~dfg~~~~~~~~~~-----~-~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~il~~l~~~g~ 199 (256)
T cd05059 136 DNVVKVSDFGLARYVLDDQY-----T-SSQGTKFPVKWAPPEVFD----------YSRFSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCcEEECCcccceecccccc-----c-ccCCCCCCccccCHHHhc----------cCCCCchhhHHHHHHHHHHHhccCC
Confidence 99999999998875421110 0 001112345699999764 3357889999999999999999 68
Q ss_pred CCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||........ ...........+...+..+.+++.+||..+|++||++.|+++.+
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 200 MPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 88864332221 11111122234455678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=264.14 Aligned_cols=196 Identities=13% Similarity=0.121 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...++++||++ |+|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+|||++.
T Consensus 66 l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~ 144 (279)
T cd05111 66 LDHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS 144 (279)
T ss_pred CCCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC
Confidence 479999999998754 55788999999 799999976 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++..... ..........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~el~t~g~ 209 (279)
T cd05111 145 DSIVQIADFGVADLLYPD-----DKKYFYSEHKTPIKWMALESIL----------FGRYTHQSDVWSYGVTVWEMMSYGA 209 (279)
T ss_pred CCcEEEcCCccceeccCC-----CcccccCCCCCcccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCC
Confidence 999999999998754211 1112223445667899999764 3467899999999999999998 88
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||....... ..... .....+...+..+.+++.+||..||++||++.|+++.+..
T Consensus 210 ~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 210 EPYAGMRPHEVPDLLEKG--ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred CCCCCCCHHHHHHHHHCC--CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 8886543322 22211 1112334556789999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=268.33 Aligned_cols=192 Identities=16% Similarity=0.128 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.++...|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+ .+++||||||+|||++.
T Consensus 56 l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~ 135 (308)
T cd06615 56 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS 135 (308)
T ss_pred CCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec
Confidence 589999999999999999999999999 5999999887789999999999999999999997 69999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++...... ......++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 136 ~~~~~l~dfg~~~~~~~~---------~~~~~~~~~~~~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~ 196 (308)
T cd06615 136 RGEIKLCDFGVSGQLIDS---------MANSFVGTRSYMSPERLQ----------GTHYTVQSDIWSLGLSLVEMAIGRY 196 (308)
T ss_pred CCcEEEccCCCccccccc---------ccccCCCCcCccChhHhc----------CCCCCccchHHHHHHHHHHHHhCCC
Confidence 999999999987643211 112345678899999763 3357889999999999999999988
Q ss_pred CCCchHHHHHHh---cCC----------------------------------CCCcccC-CCCCHHHHHHHHHhcccCcC
Q 000470 159 FFELSHLLAYRR---GQY----------------------------------DPSQHLE-KIPDSGIRKMILHMIQLEPE 200 (1472)
Q Consensus 159 pf~~~~~~~~~~---~~~----------------------------------~~~~~l~-~~~~~~l~~LI~~mL~~dP~ 200 (1472)
||.......... ... ...+.++ ...+.++++||.+||..||+
T Consensus 197 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 276 (308)
T cd06615 197 PIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPK 276 (308)
T ss_pred CCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChh
Confidence 885433221110 000 0000111 12466899999999999999
Q ss_pred CCCCHHHHHHH
Q 000470 201 LRFSAESYLQN 211 (1472)
Q Consensus 201 ~Rpsa~elL~~ 211 (1472)
+||++.|+++|
T Consensus 277 ~Rpt~~~ll~~ 287 (308)
T cd06615 277 ERADLKELTKH 287 (308)
T ss_pred hCcCHHHHhcC
Confidence 99999999998
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=261.08 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|++|||+. |+|.+++... ..+++.++..++.||+.||.|||++|++|+||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~ 135 (256)
T cd05113 56 LSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD 135 (256)
T ss_pred CCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 579999999999999889999999998 6999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....+. ... .....++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 136 ~~~~kl~d~g~~~~~~~~~-----~~~-~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~~l~~~g~ 199 (256)
T cd05113 136 QGCVKVSDFGLSRYVLDDE-----YTS-SVGSKFPVRWSPPEVLL----------YSKFSSKSDVWAFGVLMWEVYSLGK 199 (256)
T ss_pred CCCEEECCCccceecCCCc-----eee-cCCCccChhhCCHHHHh----------cCcccchhHHHHHHHHHHHHhcCCC
Confidence 9999999999887542211 100 11122456799999764 3357889999999999999998 88
Q ss_pred CCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||........ ...........+...+..+++++.+||+.||++||++.++++++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 200 MPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 88864332211 11111111223445678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=254.89 Aligned_cols=194 Identities=20% Similarity=0.112 Sum_probs=160.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|+.|+||+||+.|-....+|+|||||. |+..|.++. ++.|++.|+..++...++||+|||...-+|||||..|||++.
T Consensus 85 C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT 164 (502)
T KOG0574|consen 85 CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT 164 (502)
T ss_pred cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc
Confidence 678999999999999999999999999 999999976 466999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+|+.||+|||.+.... +...-..+..||+.|||||++.. -.|+.++||||||++..||..|+|
T Consensus 165 ~G~AKLADFGVAGQLT-------DTMAKRNTVIGTPFWMAPEVI~E----------IGY~~~ADIWSLGITaIEMAEG~P 227 (502)
T KOG0574|consen 165 DGIAKLADFGVAGQLT-------DTMAKRNTVIGTPFWMAPEVIEE----------IGYDTKADIWSLGITAIEMAEGRP 227 (502)
T ss_pred cchhhhhhccccchhh-------hhHHhhCccccCcccccHHHHHH----------hccchhhhHhhhcchhhhhhcCCC
Confidence 9999999999886542 11122356779999999998763 357789999999999999999999
Q ss_pred CCCchHH-HHHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-LAYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-~~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..-.. ..+.-....|.+. -+...+.++.++|++||.++|++|-||-++++|
T Consensus 228 PYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 228 PYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 9963221 1111112222222 233456789999999999999999999999998
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-26 Score=269.14 Aligned_cols=201 Identities=21% Similarity=0.183 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++.+...|+||||+. ++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~ 137 (316)
T cd05574 58 LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH 137 (316)
T ss_pred CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc
Confidence 579999999999999999999999998 5999998764 4689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCC----------------------CceeeccCCCCccccCcccccccCCccccccCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSD----------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~----------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~ 135 (1472)
.++.++|+|||++............ .........|+..|+|||.+. +.
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----------~~ 207 (316)
T cd05574 138 ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS----------GD 207 (316)
T ss_pred CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc----------CC
Confidence 9999999999987654321110000 000112234678899999764 33
Q ss_pred CCCccchHHHHHHHHHHHHhCCCCCCchHHHH-HHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCC----HHHHH
Q 000470 136 PLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFS----AESYL 209 (1472)
Q Consensus 136 ~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps----a~elL 209 (1472)
.++.++|||||||++|+|++|..||....... +..... ..........++.++++|.+||+.||++||+ ++|++
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 56889999999999999999998886543322 211111 1111111225788999999999999999999 99999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 288 ~~ 289 (316)
T cd05574 288 QH 289 (316)
T ss_pred cC
Confidence 98
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=267.64 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=156.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++++...|+||||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.+
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~ 137 (305)
T cd05609 58 AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM 137 (305)
T ss_pred CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC
Confidence 479999999999999999999999999 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCC--------CCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 80 NWLYLSDFASFKPTYIPYDD--------PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~--------~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+.++|+|||.++........ ............++..|+|||.+. ...++.++|||||||++|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~vl~ 207 (305)
T cd05609 138 GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL----------RQGYGKPVDWWAMGIILY 207 (305)
T ss_pred CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhcc----------CCCCCchhhHHHHHHHHH
Confidence 99999999988642111100 000011112345678899999775 235788999999999999
Q ss_pred HHHhCCCCCCchHHHHHHh---cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 000470 152 ELFLEVPFFELSHLLAYRR---GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~~~~---~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 211 (1472)
||++|..||......+... ......+......+..++++|.+||+.||++||+ +.++++|
T Consensus 208 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 208 EFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 9999988886543332221 1111111222345678999999999999999997 6888877
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=261.60 Aligned_cols=188 Identities=18% Similarity=0.145 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|..++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 61 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 140 (262)
T cd05077 61 VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR 140 (262)
T ss_pred CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence 579999999999999999999999999 688888865 356899999999999999999999999999999999999987
Q ss_pred CCc-------EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WNW-------LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~~-------vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
++. ++++|||.+...... ....++..|+|||.+. ....++.++|||||||++|
T Consensus 141 ~~~~~~~~~~~~l~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~---------~~~~~~~~~DiwslG~~l~ 200 (262)
T cd05077 141 EGIDGECGPFIKLSDPGIPITVLSR-----------QECVERIPWIAPECVE---------DSKNLSIAADKWSFGTTLW 200 (262)
T ss_pred CCccCCCCceeEeCCCCCCccccCc-----------ccccccccccChhhhc---------CCCCCCchhHHHHHHHHHH
Confidence 664 899999987644211 1233567799999763 1345788999999999999
Q ss_pred HHH-hCCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELF-LEVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLl-tg~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+ .|.+||......... ..... .....++++++||.+||+.||++||++.++++++
T Consensus 201 el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 201 EICYNGEIPLKDKTLAEKERFYEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHhCCCCCCCCcchhHHHHHHhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 997 478888654433222 22211 1122346799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=267.56 Aligned_cols=198 Identities=15% Similarity=0.136 Sum_probs=156.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+||||++ |+|.+++..+ ..++..++..++.||+.||.|||++||
T Consensus 79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi 158 (304)
T cd05101 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC 158 (304)
T ss_pred cCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 69999999999999999999999999 6999999753 246788899999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 159 vH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 223 (304)
T cd05101 159 IHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 223 (304)
T ss_pred eecccccceEEEcCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhc----------cCCCCchhhHH
Confidence 9999999999999999999999999875522111 11112233456799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||............ .......+...+..+++||.+||..+|++||++.|+++.++.
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 99999999998 68888654443332211 111122334566889999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-26 Score=259.97 Aligned_cols=200 Identities=16% Similarity=0.068 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++. ...|+||||++ ++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+|||++.
T Consensus 52 l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~ 130 (257)
T cd05115 52 LDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN 130 (257)
T ss_pred cCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC
Confidence 579999999999864 47899999998 699999975 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 131 ~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~ 196 (257)
T cd05115 131 QHYAKISDFGLSKALGADDS----YYKARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGITMWEAFSYGQ 196 (257)
T ss_pred CCcEEeccCCccccccCCcc----ceeccCCCCCCcccCCHHHHc----------cCCCCchhhHHHHHHHHHHHhcCCC
Confidence 99999999998875422111 000011122346799999764 3357889999999999999996 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
+||.......... .........+...++++.++|.+||..||++||++.++.+.++..
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 197 KPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 8886433222111 111112234455678999999999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=259.95 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..++..|++|||++ ++|.+++.. .+.+++.++..++.|++.||.|||++||+||||||+||+++.
T Consensus 62 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~ 141 (266)
T cd05033 62 FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS 141 (266)
T ss_pred CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence 579999999999999999999999998 599999976 346899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++|||||||++|+|++ |.
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Dv~slG~~l~~l~~~g~ 206 (266)
T cd05033 142 NLVCKVSDFGLSRRLEDSEA-----TYTTKGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred CCCEEECccchhhccccccc-----ceeccCCCCCccccChhhhc----------cCCCccccchHHHHHHHHHHHccCC
Confidence 99999999999886631111 11111233456799999764 3357889999999999999998 88
Q ss_pred CCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||....... .....+.. ..+...++.+.+++.+||+.+|++||+++|+++++..
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 207 RPYWDMSNQDVIKAVEDGYRL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 7874322221 12222111 2234556889999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=240.17 Aligned_cols=292 Identities=20% Similarity=0.324 Sum_probs=234.0
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc--cccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE--KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1134 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e--~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwd 1134 (1472)
.+.-+-|..|||||+|++|||.||-+.|||..+++ +...+...-.+-.+...|.|+.|+.++..+|+|+.||.|+||+
T Consensus 212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 44567788999999999999999999999988765 4444555555556778899999999999999999999999999
Q ss_pred ccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEE
Q 000470 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214 (1472)
Q Consensus 1135 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1214 (1472)
+.+. .++|.++..|...|+++.|+.| +..+++++.|.++++-.+++|++...+.+ |...|+.
T Consensus 292 i~tG-------------~ClRrFdrAHtkGvt~l~FSrD---~SqiLS~sfD~tvRiHGlKSGK~LKEfrG--HsSyvn~ 353 (508)
T KOG0275|consen 292 IETG-------------QCLRRFDRAHTKGVTCLSFSRD---NSQILSASFDQTVRIHGLKSGKCLKEFRG--HSSYVNE 353 (508)
T ss_pred Eecc-------------hHHHHhhhhhccCeeEEEEccC---cchhhcccccceEEEeccccchhHHHhcC--ccccccc
Confidence 9852 2567777788888999999998 55899999999999999999999999987 9999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCC
Q 000470 1215 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAEN 1293 (1472)
Q Consensus 1215 l~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t 1293 (1472)
..|.++|+.++++++||+|++|+..+..|+.+++... ..+|+.+.. .|.. ...++++.-.++|.|-++.
T Consensus 354 a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~-~PKn--------peh~iVCNrsntv~imn~q- 423 (508)
T KOG0275|consen 354 ATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL-LPKN--------PEHFIVCNRSNTVYIMNMQ- 423 (508)
T ss_pred eEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE-cCCC--------CceEEEEcCCCeEEEEecc-
Confidence 9999999999999999999999999999999998754 457777766 3422 2367888888999998886
Q ss_pred CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCC
Q 000470 1294 GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDL 1372 (1472)
Q Consensus 1294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg 1372 (1472)
|+.++.|......+ +..-+.+.+|.| ++.+.|+|+
T Consensus 424 GQvVrsfsSGkREg--------------------------------------------GdFi~~~lSpkGewiYcigED~ 459 (508)
T KOG0275|consen 424 GQVVRSFSSGKREG--------------------------------------------GDFINAILSPKGEWIYCIGEDG 459 (508)
T ss_pred ceEEeeeccCCccC--------------------------------------------CceEEEEecCCCcEEEEEccCc
Confidence 67776665322100 012344455766 788999999
Q ss_pred eEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeee
Q 000470 1373 KIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSV 1452 (1472)
Q Consensus 1373 ~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~ 1452 (1472)
.++.+...+++.-..+. -|..-|-.++ -
T Consensus 460 vlYCF~~~sG~LE~tl~---------------------------------------------------VhEkdvIGl~-H 487 (508)
T KOG0275|consen 460 VLYCFSVLSGKLERTLP---------------------------------------------------VHEKDVIGLT-H 487 (508)
T ss_pred EEEEEEeecCceeeeee---------------------------------------------------cccccccccc-c
Confidence 99999877665432221 1555555664 6
Q ss_pred ecCCcEEEEEcCCceEEEcC
Q 000470 1453 KLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1453 ~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+|..+.|+|-+.||.+|+||
T Consensus 488 HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 488 HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcccchhhhhcccchhhhcC
Confidence 78899999999999999997
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=293.00 Aligned_cols=194 Identities=19% Similarity=0.217 Sum_probs=150.7
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCee
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-------GICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-------gIvH 66 (1472)
|+||||++++++|.. ...+||||||++ |+|.++|.. ...+++..++.|+.||+.||.|||+. +|+|
T Consensus 69 L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVH 148 (1021)
T PTZ00266 69 LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLH 148 (1021)
T ss_pred cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCcee
Confidence 589999999998854 457999999999 699999865 24699999999999999999999995 4999
Q ss_pred cCCCCCCEEEccC-----------------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCcc
Q 000470 67 GDIKCENVLVTSW-----------------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129 (1472)
Q Consensus 67 ~DLKpeNILv~~~-----------------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~ 129 (1472)
|||||+|||++.. +.+||+|||+++...... ......|++.|+|||++..
T Consensus 149 RDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~g----- 215 (1021)
T PTZ00266 149 RDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLH----- 215 (1021)
T ss_pred ccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhc-----
Confidence 9999999999642 348999999987542111 1134467999999998752
Q ss_pred ccccCCCCCccchHHHHHHHHHHHHhCCCCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 130 QVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 130 ~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
....++.++|||||||++|||++|.+||.... ...+.... ..+...+ ...+..+.+||.+||..+|.+||++.|
T Consensus 216 ---e~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPSa~Q 291 (1021)
T PTZ00266 216 ---ETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPSALQ 291 (1021)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcCHHH
Confidence 13357889999999999999999998985332 22221111 1111111 234678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+|.|
T Consensus 292 lL~h 295 (1021)
T PTZ00266 292 CLGY 295 (1021)
T ss_pred Hhcc
Confidence 9986
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=274.11 Aligned_cols=199 Identities=20% Similarity=0.296 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEe----CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~----~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||++++++++. ....|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+||++
T Consensus 61 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~ 140 (334)
T cd07855 61 FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV 140 (334)
T ss_pred cCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 579999999998863 3578999999999999999887779999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.+||+|||.++........ ...+.....++..|+|||.+.. ...++.++||||+||++|||++|
T Consensus 141 ~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~l~el~~g 208 (334)
T cd07855 141 NEDCELRIGDFGMARGLSSSPTE---HKYFMTEYVATRWYRAPELLLS---------LPEYTTAIDMWSVGCIFAEMLGR 208 (334)
T ss_pred cCCCcEEecccccceeecccCcC---CCcccccccccccccChHHhcC---------CcccccccchHHHHHHHHHHHcC
Confidence 99999999999998755332211 1222234467888999998742 23578899999999999999999
Q ss_pred CCCCCchHHHH----HHh--c--------------------CCCCCc-----ccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 157 VPFFELSHLLA----YRR--G--------------------QYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 157 ~~pf~~~~~~~----~~~--~--------------------~~~~~~-----~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
++||....... +.. + ...... .+....++.++++|.+||+.||++||++
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 288 (334)
T cd07855 209 RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV 288 (334)
T ss_pred CCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH
Confidence 99996432110 000 0 000000 1112346789999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
++++.|
T Consensus 289 ~~~l~~ 294 (334)
T cd07855 289 EQALQH 294 (334)
T ss_pred HHHHhC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=262.66 Aligned_cols=203 Identities=16% Similarity=0.133 Sum_probs=153.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++.+......|+||||++ |+|.+++.... ..++.....++.||+.||+|||++||+||||||+||
T Consensus 52 l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni 131 (269)
T cd05042 52 LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNC 131 (269)
T ss_pred CCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhhe
Confidence 579999999999999999999999999 69999997632 246778899999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
|++.++.+||+|||++....... .........++..|+|||.+...... .....++.++||||+||++|||+
T Consensus 132 ll~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05042 132 QLTADLSVKIGDYGLALEQYPED-----YYITKDCHAVPLRWLAPELVEIRGQD---LLPKDQTKKSNIWSLGVTMWELF 203 (269)
T ss_pred EecCCCcEEEeccccccccccch-----heeccCCCCCcccccCHHHHhhcccc---ccccccchhhHHHHHHHHHHHHH
Confidence 99999999999999876432110 00001222345679999987532211 12346788999999999999999
Q ss_pred h-CCCCCCchH-HH---HHHh-cCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 L-EVPFFELSH-LL---AYRR-GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 t-g~~pf~~~~-~~---~~~~-~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ |.+||.... .. .... .... +.+.++...++.+.+++..|+ .||++||+++|+++.+
T Consensus 204 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 204 TAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred hCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 9 688885432 11 1111 1111 223345566778899999998 5999999999999763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=263.04 Aligned_cols=195 Identities=15% Similarity=0.060 Sum_probs=153.7
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|++|||++ |+|.+++..+. .+++.++++++.|++.||+|||++|+
T Consensus 54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i 133 (270)
T cd05047 54 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 133 (270)
T ss_pred cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 69999999999999999999999998 79999996532 47899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||++...... .. ......+..|+|||.+. ...++.++|||
T Consensus 134 ~H~dikp~nili~~~~~~kl~dfgl~~~~~~~---~~-----~~~~~~~~~y~apE~~~----------~~~~~~~~Di~ 195 (270)
T cd05047 134 IHRDLAARNILVGENYVAKIADFGLSRGQEVY---VK-----KTMGRLPVRWMAIESLN----------YSVYTTNSDVW 195 (270)
T ss_pred eecccccceEEEcCCCeEEECCCCCccccchh---hh-----ccCCCCccccCChHHHc----------cCCCCchhhHH
Confidence 99999999999999999999999987532110 00 01122345699999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |.+||.......... .........+...+..+.+|+.+||..||.+||++.++++.+..
T Consensus 196 slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 196 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred HHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 99999999997 888886443322211 11111222334456789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-26 Score=262.90 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=150.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++.. ++.+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 73 l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 73 VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLAR 152 (274)
T ss_pred CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence 589999999999999999999999999 689988865 567899999999999999999999999999999999999986
Q ss_pred CC-------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WN-------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~-------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
.+ .++++|||.+...... ....++..|+|||.+.. ...++.++|||||||++|
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~---------~~~~~~~~Dv~slG~~l~ 212 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPG---------GNSLSTAADKWSFGTTLL 212 (274)
T ss_pred cCcccCccceeeecCCccccccccc-----------cccccCCcccCchhhcC---------CCCCCcHHHHHHHHHHHH
Confidence 54 3899999987543211 12235677999997742 245788999999999999
Q ss_pred HHH-hCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELF-LEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLl-tg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+ +|.+||........... +......+....+.+.++|.+||+.+|++||++.++++++
T Consensus 213 el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 213 EICFDGEVPLKERTPSEKERF-YEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHhCCCCCccccChHHHHHH-HHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 995 67888864322211110 0011112233346799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-26 Score=259.66 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..++..|++|||++ ++|.+++.... .+++.++..++.|++.||.+||++||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~ 137 (261)
T cd05068 58 LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG 137 (261)
T ss_pred CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc
Confidence 579999999999999999999999996 79999997654 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||+++........ .......+..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 138 ENNICKVADFGLARVIKEDIYE------AREGAKFPIKWTAPEAAL----------YNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCCCEEECCcceEEEccCCccc------ccCCCcCceeccCccccc----------cCCCCchhhHHHHHHHHHHHHhcC
Confidence 9999999999998766311100 001111235699999764 3457889999999999999999 8
Q ss_pred CCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++||....... ....... ...+...+..+.+++.+||+.+|++||+++++++.++
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 202 RMPYPGMTNAEVLQQVDQGYR--MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 99996533222 1122221 1233445678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=260.20 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=153.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||||+++++++..+...|+||||++ |+|.+++...+.+++.++..++.|++.||+|||++||+||||||+||+++.++
T Consensus 43 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 122 (237)
T cd05576 43 CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG 122 (237)
T ss_pred CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence 58999999999999999999999999 69999998877799999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.+...... .....++..|+|||.+. ...++.++|+||+||++|||++|.++|
T Consensus 123 ~~~l~df~~~~~~~~~----------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~~~ 182 (237)
T cd05576 123 HIQLTYFSRWSEVEDS----------CDGEAVENMYCAPEVGG----------ISEETEACDWWSLGAILFELLTGKTLV 182 (237)
T ss_pred CEEEecccchhccccc----------cccCCcCccccCCcccC----------CCCCCchhhHHHHHHHHHHHHHCcchh
Confidence 9999999977544211 12233466799999653 335688999999999999999998877
Q ss_pred CchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHH
Q 000470 161 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 211 (1472)
....... .......++...++.++++|.+||+.||++|+++ +++++|
T Consensus 183 ~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 183 ECHPSGI----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred hcCchhc----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence 6432110 0011123445567889999999999999999986 888887
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-26 Score=265.01 Aligned_cols=192 Identities=24% Similarity=0.314 Sum_probs=152.6
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||+++++++.++ +..|+||||++++|.+.+..+ ..+++.++..++.|++.||+|||++||+||||||+||+++.
T Consensus 56 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~ 135 (282)
T cd07831 56 PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD 135 (282)
T ss_pred CCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC
Confidence 599999999999987 899999999999999998763 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+.++|+|||.++....... . ....++..|+|||.+.. ...++.++||||+||++|||++|.+
T Consensus 136 -~~~kl~dfg~~~~~~~~~~----~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~el~~~~~ 197 (282)
T cd07831 136 -DILKLADFGSCRGIYSKPP----Y----TEYISTRWYRAPECLLT---------DGYYGPKMDIWAVGCVFFEILSLFP 197 (282)
T ss_pred -CCeEEEecccccccccCCC----c----CCCCCCcccCChhHhhc---------CCCCCcchhHHHHHHHHHHHHcCCc
Confidence 9999999999875532111 1 12345788999997642 2356789999999999999999999
Q ss_pred CCCchHHHH----HHhc------------------CCCCCc-------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHLLA----YRRG------------------QYDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~~~----~~~~------------------~~~~~~-------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||...+... .... .+.... .+....+..+++||.+||++||++||++++++
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 198 LFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred CCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 996443211 1000 000000 01123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 278 ~~ 279 (282)
T cd07831 278 RH 279 (282)
T ss_pred hC
Confidence 98
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=266.33 Aligned_cols=193 Identities=17% Similarity=0.177 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++.+.++...|+||||+. ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~ 136 (285)
T cd05630 57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD 136 (285)
T ss_pred CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC
Confidence 579999999999999999999999998 6999988543 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
..+.++|+|||++....... ......|+..|+|||.+. +..++.++||||+||++|+|++|.
T Consensus 137 ~~~~~~l~Dfg~~~~~~~~~--------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~ 198 (285)
T cd05630 137 DHGHIRISDLGLAVHVPEGQ--------TIKGRVGTVGYMAPEVVK----------NERYTFSPDWWALGCLLYEMIAGQ 198 (285)
T ss_pred CCCCEEEeeccceeecCCCc--------cccCCCCCccccChHHHc----------CCCCCCccccHHHHHHHHHHHhCC
Confidence 99999999999876432110 112335788999999774 345788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||..... ..............+...++.+++||.+||+.||++||+ ++|+++|
T Consensus 199 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 199 SPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred CCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 99974321 111111111122244456788999999999999999999 9999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-26 Score=265.54 Aligned_cols=195 Identities=23% Similarity=0.335 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ...|+||||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus 61 l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 140 (293)
T cd07843 61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN 140 (293)
T ss_pred cCCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC
Confidence 5799999999999887 899999999999999998764 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....+... .....+++.|+|||.+.. ...++.++||||+||++|||++|.
T Consensus 141 ~~~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 141 NRGILKICDFGLAREYGSPLKP-------YTQLVVTLWYRAPELLLG---------AKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred CCCcEEEeecCceeeccCCccc-------cccccccccccCchhhcC---------CccccchhhHHHHHHHHHHHHhCC
Confidence 9999999999988765432211 122335778999998742 224678999999999999999999
Q ss_pred CCCCchHHHH----HHhcC--------------------------CC-CCcccCCC-CCHHHHHHHHHhcccCcCCCCCH
Q 000470 158 PFFELSHLLA----YRRGQ--------------------------YD-PSQHLEKI-PDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~--------------------------~~-~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+||....... +.... +. ....++.. .++.++++|.+||+.||++|||+
T Consensus 205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~ 284 (293)
T cd07843 205 PLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA 284 (293)
T ss_pred CCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH
Confidence 9996432111 10000 00 01112222 46789999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|+++|
T Consensus 285 ~ell~~ 290 (293)
T cd07843 285 EDALKH 290 (293)
T ss_pred HHHhcC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=259.66 Aligned_cols=192 Identities=19% Similarity=0.251 Sum_probs=162.6
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.|.||.+-..|++..++|+|+..|. |+|.-.|..- +.+++..+++++.||++||++||+++||.|||||+|||+|+
T Consensus 243 ~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd 322 (591)
T KOG0986|consen 243 SSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD 322 (591)
T ss_pred ccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc
Confidence 57899999999999999999999999 6998888663 47999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
.|++.|+|+|+|..+. +..+ .....||..|||||++. +..|+...|.|||||+||||+.|+.
T Consensus 323 ~GhvRISDLGLAvei~--~g~~------~~~rvGT~GYMAPEvl~----------ne~Y~~s~Dwf~lGCllYemi~G~s 384 (591)
T KOG0986|consen 323 HGHVRISDLGLAVEIP--EGKP------IRGRVGTVGYMAPEVLQ----------NEVYDFSPDWFSLGCLLYEMIAGHS 384 (591)
T ss_pred CCCeEeeccceEEecC--CCCc------cccccCcccccCHHHHc----------CCcccCCccHHHHHhHHHHHHcccC
Confidence 9999999999997552 2222 24457899999999875 4469999999999999999999999
Q ss_pred CCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 159 FFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 159 pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
||.... ..+..+........++...++++++|.+.+|.+||.+|. .++++.+|
T Consensus 385 PFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 385 PFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred chhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 996432 223444444445567788899999999999999999998 46788888
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=284.77 Aligned_cols=195 Identities=17% Similarity=0.145 Sum_probs=149.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||++++++++.+...|+|+|++.++|++++... ......+++.|+.||+.||+|||++||+||||||+|||
T Consensus 220 l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 220 LNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred CCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 5899999999999999999999999999999987543 22346678889999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||+++....... .......|+..|+|||.+. +..++.++|||||||++|||++
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILA----------GDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccc------cccccccCCcCCCCchhhc----------CCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999876532111 1112346789999999875 3467889999999999999999
Q ss_pred CC-CCCCch------HHHHHHhcCCCCC-----------------------ccc-----CCCCCHHHHHHHHHhcccCcC
Q 000470 156 EV-PFFELS------HLLAYRRGQYDPS-----------------------QHL-----EKIPDSGIRKMILHMIQLEPE 200 (1472)
Q Consensus 156 g~-~pf~~~------~~~~~~~~~~~~~-----------------------~~l-----~~~~~~~l~~LI~~mL~~dP~ 200 (1472)
|. +||... ++.+......... ..+ ....+..+.++|.+||++||+
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 84 455321 1111111000000 000 012345678899999999999
Q ss_pred CCCCHHHHHHH
Q 000470 201 LRFSAESYLQN 211 (1472)
Q Consensus 201 ~Rpsa~elL~~ 211 (1472)
+|||+.|+|+|
T Consensus 444 ~Rpsa~elL~h 454 (501)
T PHA03210 444 LRPGAAELLAL 454 (501)
T ss_pred cCcCHHHHhhC
Confidence 99999999988
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-26 Score=269.79 Aligned_cols=203 Identities=19% Similarity=0.167 Sum_probs=156.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ |+|.+++... ..+++..++.+++|++.||+|||++||+||||||+||+++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~ 135 (314)
T cd08216 56 LQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS 135 (314)
T ss_pred cCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe
Confidence 589999999999999999999999999 6999998753 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....................++..|+|||.+... ...++.++||||+||++|||++|+
T Consensus 136 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Diws~G~il~el~~g~ 207 (314)
T cd08216 136 GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN--------LQGYNEKSDIYSVGITACELANGH 207 (314)
T ss_pred cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCC--------CCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999998876533222211222223444567789999987521 234788999999999999999999
Q ss_pred CCCCchHHH----HHHhcCCC------------------------------CCcccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 158 PFFELSHLL----AYRRGQYD------------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 158 ~pf~~~~~~----~~~~~~~~------------------------------~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+||...... ....+... .........+..+.+|+.+||+.||++||
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 287 (314)
T cd08216 208 VPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP 287 (314)
T ss_pred CCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc
Confidence 888643211 11111100 00001111235788999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
+++|+|+|
T Consensus 288 t~~~ll~~ 295 (314)
T cd08216 288 SASQLLNH 295 (314)
T ss_pred CHHHHhcC
Confidence 99999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=284.26 Aligned_cols=197 Identities=20% Similarity=0.232 Sum_probs=161.7
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
.+=|+.++..|++++++|+||||++ |+|..++++-..+++..+++++..|+-||.-+|+.|+|||||||+|||++..|+
T Consensus 134 s~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 134 SEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred cHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc
Confidence 4557888999999999999999999 699999999888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
+||+|||.+-.... +-.....+..|||.|++||++...+.+ .+.|++.+|.||+|+++|||+.|..||.
T Consensus 214 ikLADFGsClkm~~------dG~V~s~~aVGTPDYISPEvLqs~~~~-----~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDA------DGTVRSSVAVGTPDYISPEVLQSQGDG-----KGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred EeeccchhHHhcCC------CCcEEeccccCCCCccCHHHHHhhcCC-----ccccCCccchhhhHHHHHHHHcCCCcch
Confidence 99999998765521 223445677899999999999755432 4789999999999999999999977776
Q ss_pred chHHHHHHhcCCC--CCcccC--CCCCHHHHHHHHHhcccCcCCCCC---HHHHHHH
Q 000470 162 LSHLLAYRRGQYD--PSQHLE--KIPDSGIRKMILHMIQLEPELRFS---AESYLQN 211 (1472)
Q Consensus 162 ~~~~~~~~~~~~~--~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 211 (1472)
...+......... ....+| ...++.+++||.++|. +|+.|.. ++++-.|
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 5554432211111 111222 2367899999999984 5889998 9999999
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-26 Score=261.60 Aligned_cols=196 Identities=20% Similarity=0.218 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. +...|+++||++ ++|.+++.....+++.+++.++.|++.||.|||++||+||||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~ 140 (266)
T cd06651 61 LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD 140 (266)
T ss_pred cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 589999999999876 367899999998 59999998877799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||+++.......... ......++..|+|||.+. +..++.++||||+||++|||++|+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~el~~g~ 206 (266)
T cd06651 141 SAGNVKLGDFGASKRLQTICMSGT----GIRSVTGTPYWMSPEVIS----------GEGYGRKADVWSLGCTVVEMLTEK 206 (266)
T ss_pred CCCCEEEccCCCccccccccccCC----ccccCCccccccCHHHhC----------CCCCCchhhhHHHHHHHHHHHHCC
Confidence 999999999999875422111110 112234677899999764 335688999999999999999999
Q ss_pred CCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... ........ ....+.++...++.++++| +||..+|++||+++|+++|
T Consensus 207 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 207 PPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 9996443 22222211 1122344556678899999 6777899999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-26 Score=258.79 Aligned_cols=194 Identities=19% Similarity=0.132 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+++||+. ++|.+++.. ...+++.+++.++.|++.||.|||+.||+||||+|+||+++.
T Consensus 55 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~ 134 (256)
T cd06612 55 CDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE 134 (256)
T ss_pred CCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC
Confidence 489999999999999999999999999 599999865 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. +..++.++||||+||++|+|++|++
T Consensus 135 ~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~s~G~il~~l~~g~~ 197 (256)
T cd06612 135 EGQAKLADFGVSGQLTDTMAK-------RNTVIGTPFWMAPEVIQ----------EIGYNNKADIWSLGITAIEMAEGKP 197 (256)
T ss_pred CCcEEEcccccchhcccCccc-------cccccCCccccCHHHHh----------cCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999998765322110 11233577899999764 2357889999999999999999998
Q ss_pred CCCchHHHHHHhcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLAYRRGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||............ .......+...+..+.++|.+||+.||++||++.|+++|
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 198 PYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 88644322211111 111112233456789999999999999999999999988
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=267.88 Aligned_cols=196 Identities=16% Similarity=0.144 Sum_probs=155.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
.||||+++++++..+...|++|||+. |+|.+++..+ ..++..++..++.||+.||.|||++||
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 155 (314)
T cd05099 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC 155 (314)
T ss_pred CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 59999999999999999999999999 6999999653 247889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 156 ~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diw 220 (314)
T cd05099 156 IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALF----------DRVYTHQSDVW 220 (314)
T ss_pred eeccccceeEEEcCCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHc----------cCCcCccchhh
Confidence 9999999999999999999999999875421110 00011122345799999764 33578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||...... ....... ....+...+..++++|.+||..||++||++.|+++.+..
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGH--RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 99999999999 78888654332 2222221 112334456789999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=272.39 Aligned_cols=200 Identities=17% Similarity=0.164 Sum_probs=155.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++++++..|+||||+. |+|.+++.. ...+++..++.++.|++.||+|||++||+||||||+|||++.
T Consensus 58 ~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~ 137 (331)
T cd05624 58 GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM 137 (331)
T ss_pred CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence 479999999999999999999999998 699999986 467899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.+||+|||+++...... ........|++.|+|||++.... .....++.++||||+||++|||++|++
T Consensus 138 ~~~~kl~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwSlGvil~ell~g~~ 206 (331)
T cd05624 138 NGHIRLADFGSCLKMNQDG------TVQSSVAVGTPDYISPEILQAME-----DGMGKYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred CCCEEEEeccceeeccCCC------ceeeccccCCcccCCHHHHhccc-----cCCCCCCCcccEEeeehhhhhhhhCCC
Confidence 9999999999987542211 11112346889999999875321 112357889999999999999999999
Q ss_pred CCCchHHHHH-H---hcCCCC-CcccCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q 000470 159 FFELSHLLAY-R---RGQYDP-SQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~-~---~~~~~~-~~~l~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 211 (1472)
||........ . ...... .+......++.++++|.+||..++++ |++++++++|
T Consensus 207 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 207 PFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 9865443222 1 111111 11111234678999999999876654 4689999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=266.31 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=217.0
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc-----------cc--------------cccccceEEec
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE-----------KD--------------ISFRSRLTYHL 1104 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e-----------~~--------------~~~~~~~t~~~ 1104 (1472)
+..++..-...|+|..|++|++.+|.|-.|.+|++|.+...+ +. ...-...++.+
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~G 449 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYG 449 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeec
Confidence 344444444679999999999999999999999999987210 00 00112345779
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEe
Q 000470 1105 EGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST 1184 (1472)
Q Consensus 1105 ~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at 1184 (1472)
|.++|..+.|+|+.+.|++||.|++||+|.+++-. .+.. ...|-.+|..+.|+|. |-++++|+
T Consensus 450 H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s-------------~~V~-y~GH~~PVwdV~F~P~---GyYFatas 512 (707)
T KOG0263|consen 450 HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS-------------CLVI-YKGHLAPVWDVQFAPR---GYYFATAS 512 (707)
T ss_pred CCCceeeeeecccccceeeccCCcceeeeecccce-------------eEEE-ecCCCcceeeEEecCC---ceEEEecC
Confidence 99999999999999999999999999999998511 2222 2367789999999998 78999999
Q ss_pred CCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCC
Q 000470 1185 QNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPP 1264 (1472)
Q Consensus 1185 ~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~ 1264 (1472)
.|++-++|........+.+.+ |.+.|.|+.|+|+.+++++||+|.+|++||..++..++.+.. |.++|+.+.+ +|+
T Consensus 513 ~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~-Sp~ 588 (707)
T KOG0263|consen 513 HDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF-SPC 588 (707)
T ss_pred CCceeeeeecccCCchhhhcc--cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE-cCC
Confidence 999999999999988888877 999999999999999999999999999999999999999975 8899999999 776
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccccc
Q 000470 1265 PNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1265 ~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
+ +++++|+.+|.|.+||+.+|..+..+.
T Consensus 589 G---------r~LaSg~ed~~I~iWDl~~~~~v~~l~------------------------------------------- 616 (707)
T KOG0263|consen 589 G---------RYLASGDEDGLIKIWDLANGSLVKQLK------------------------------------------- 616 (707)
T ss_pred C---------ceEeecccCCcEEEEEcCCCcchhhhh-------------------------------------------
Confidence 5 599999999999999999987765554
Q ss_pred CCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCc
Q 000470 1345 NEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1345 ~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
+|...|.++.|+.+| .|++||.|+.|++||+......
T Consensus 617 ----~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 617 ----GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred ----cccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence 233478999999988 7779999999999999876554
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=266.63 Aligned_cols=195 Identities=28% Similarity=0.292 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.+ +|.+++...+.+++.++..++.||+.||.+||++||+|+||||+||+++.+
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~ 134 (260)
T PF00069_consen 55 LRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN 134 (260)
T ss_dssp HTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999999996 999999976779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.... ..........++..|+|||.+. ....++.++|||||||++|+|++|..|
T Consensus 135 ~~~~l~Dfg~~~~~~-------~~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~il~~l~~~~~p 198 (260)
T PF00069_consen 135 GEVKLIDFGSSVKLS-------ENNENFNPFVGTPEYMAPEVLQ---------QGKKYTRKSDIWSLGIILYELLTGKLP 198 (260)
T ss_dssp SEEEESSGTTTEEST-------STTSEBSSSSSSGGGSCHHHHT---------TTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred ccccccccccccccc-------cccccccccccccccccccccc---------ccccccccccccccccccccccccccc
Confidence 999999999987531 1112334556788999999764 134678999999999999999999888
Q ss_pred CCch----HHHHHHhcCCC-CCcccC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS----HLLAYRRGQYD-PSQHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~----~~~~~~~~~~~-~~~~l~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... ....+.+.... ...... ....+.++++|.+||+.||++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 199 FEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp STTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 8654 22222211111 000111 1113789999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=258.62 Aligned_cols=193 Identities=18% Similarity=0.197 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+. .+++..++.++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~ 136 (256)
T cd05039 57 LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS 136 (256)
T ss_pred cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe
Confidence 579999999999999999999999999 69999997755 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++...... .....+..|+|||.+. ...++.++||||+||++|||++ |
T Consensus 137 ~~~~~~l~d~g~~~~~~~~~----------~~~~~~~~~~ape~~~----------~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 137 EDLVAKVSDFGLAKEASQGQ----------DSGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred CCCCEEEccccccccccccc----------ccCCCcccccCchhhc----------CCcCCcHHHHHHHHHHHHHHHhcC
Confidence 99999999999987652111 1222355799999764 3356789999999999999997 8
Q ss_pred CCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
..||........... ........+...++.+.++|.+||..+|++||+++|+++.+.
T Consensus 197 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 197 RVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 888865443332211 111122334456788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=259.99 Aligned_cols=198 Identities=16% Similarity=0.087 Sum_probs=154.7
Q ss_pred CCCCcceeeEEEEeC------CeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 2 SSTPCVHKKFWQETD------KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~------~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
+||||+++++++... ...|++|||++ ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+
T Consensus 61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~ 140 (272)
T cd06637 61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 140 (272)
T ss_pred CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHH
Confidence 699999999998753 46899999999 6999998763 35899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+++.++.++|+|||+++....... ......|+..|+|||.+.... .....++.++||||+||++||
T Consensus 141 nili~~~~~~~l~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGv~l~e 208 (272)
T cd06637 141 NVLLTENAEVKLVDFGVSAQLDRTVG-------RRNTFIGTPYWMAPEVIACDE-----NPDATYDFKSDLWSLGITAIE 208 (272)
T ss_pred HEEECCCCCEEEccCCCceecccccc-------cCCcccccccccCHhHhcccc-----CcCCCCCchhhHHHHHHHHHH
Confidence 99999999999999999875421110 112345788899999875321 123467889999999999999
Q ss_pred HHhCCCCCCch-HHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFELS-HLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~~~-~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|.+||... ......... ...........+..+++|+.+||..||.+||+++|+++|
T Consensus 209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 209 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 99998888532 222221111 111112233456789999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=266.28 Aligned_cols=193 Identities=21% Similarity=0.252 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|+||||++ ++|.+++.. +.+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 76 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~ 154 (292)
T cd06658 76 YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 154 (292)
T ss_pred CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 579999999999999999999999999 588888755 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ . .....++..|+|||.+. ...++.++||||+||++|||++|+.|
T Consensus 155 ~~~kL~dfg~~~~~~~~~~---~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 155 GRIKLSDFGFCAQVSKEVP---K----RKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred CCEEEccCcchhhcccccc---c----CceeecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421111 0 12234678899999764 33567899999999999999999888
Q ss_pred CCchHHHH-HH--hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-YR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~~--~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... +. .....+........+..+++++.+||..||.+||+++|+++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 218 YFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 86433221 11 112222222223456789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-26 Score=261.30 Aligned_cols=199 Identities=11% Similarity=0.040 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCe------EEEEecccC-CcHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDKA------AYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~------~~lV~Ey~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++..... .|+++||++ |+|.+++.. ...+++..+..++.|++.||.|||++||+||
T Consensus 58 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~ 137 (273)
T cd05035 58 FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHR 137 (273)
T ss_pred CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 579999999998866544 899999999 699998843 2358999999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||++++++.+||+|||.++........ .......++..|+|||.+. ...++.++||||+|
T Consensus 138 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~SlG 202 (273)
T cd05035 138 DLAARNCMLREDMTVCVADFGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLA----------DRVYTSKSDVWAFG 202 (273)
T ss_pred ccchheEEECCCCeEEECCccceeeccccccc-----cccccccCCccccCHhhcc----------cCCCCcccchHHHH
Confidence 99999999999999999999998765322110 0111223356799999763 34578899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||.......... .........+...+..+.+++.+||+.||++||++.|+++++..
T Consensus 203 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 203 VTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999999 788886543222211 11111223445567889999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-26 Score=262.49 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++... ..++++||++ |+|.+++..+ +.+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 66 ~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 66 VGSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS 144 (279)
T ss_pred cCCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 4799999999988754 5789999999 7999999764 56899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||+++....... ........++..|+|||.+. ...++.++|||||||++|||++ |.
T Consensus 145 ~~~~kL~dfG~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~t~g~ 209 (279)
T cd05109 145 PNHVKITDFGLARLLDIDET-----EYHADGGKVPIKWMALESIL----------HRRFTHQSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred CCcEEECCCCceeecccccc-----eeecCCCccchhhCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCC
Confidence 99999999999876532211 11112223456799999764 3357889999999999999998 78
Q ss_pred CCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||...... ........ ...+...+..+.++|.+||..||++||++.++++.+.
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 210 KPYDGIPAREIPDLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CCCCCCCHHHHHHHHHCCCc--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 898653322 22222111 1223446678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=263.43 Aligned_cols=199 Identities=19% Similarity=0.141 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++.+..+...|+||||++ ++|..++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.
T Consensus 66 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~ 145 (292)
T cd06644 66 CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL 145 (292)
T ss_pred CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC
Confidence 589999999999999999999999999 588877754 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+.... .....++.++|+|||||++|||++|.+
T Consensus 146 ~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il~el~~g~~ 213 (292)
T cd06644 146 DGDIKLADFGVSAKNVKTLQ-------RRDSFIGTPYWMAPEVVMCET-----MKDTPYDYKADIWSLGITLIEMAQIEP 213 (292)
T ss_pred CCCEEEccCccceecccccc-------ccceecCCccccCceeecccc-----ccCCCCCchhhhHhHHHHHHHHhcCCC
Confidence 99999999998764321110 012234577899999875321 123457889999999999999999998
Q ss_pred CCCchHHH-HHHhcC--CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLL-AYRRGQ--YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~-~~~~~~--~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||...... .+.+.. ..+....+...+..+.++|.+||+.||++||+++++++|
T Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 214 PHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 88643322 121111 111222334456789999999999999999999999988
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-25 Score=246.76 Aligned_cols=289 Identities=17% Similarity=0.235 Sum_probs=230.5
Q ss_pred eeccccccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCC----CccccccccceEEecc----CCceEEEEEecCCCEEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRK----LEKDISFRSRLTYHLE----GSRALCTMMLRHSAQVV 1122 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~----~e~~~~~~~~~t~~~~----~~~I~~v~f~~~~~~la 1122 (1472)
..+. |+..|.+.+|+|-.. .+++|+.|-+.++|++.. ++....+|....+.++ ...|++++|+.+|..||
T Consensus 173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 3444 999999999999665 999999999999999874 1121223332222222 24699999999999999
Q ss_pred EEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccce
Q 000470 1123 VGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT 1202 (1472)
Q Consensus 1123 s~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~ 1202 (1472)
+|+.||.+++|+.+. . +......|..+|..+.|+-. |.+|++++.||++.+||..+++....
T Consensus 252 tG~~~G~~riw~~~G------~---------l~~tl~~HkgPI~slKWnk~---G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 252 TGSEDGEARIWNKDG------N---------LISTLGQHKGPIFSLKWNKK---GTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred EeecCcEEEEEecCc------h---------hhhhhhccCCceEEEEEcCC---CCEEEeccCCccEEEEeccCceEEEe
Confidence 999999999999872 1 11122356778888999988 78999999999999999999988877
Q ss_pred eecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1203 LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1203 l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
+.. |..+-..+.|-. ..-+++.+.||.|+++-+.-..+++++.. |..+|..+.| .|.+. ++++++.
T Consensus 314 f~~--~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~G-H~g~V~alk~-n~tg~---------LLaS~Sd 379 (524)
T KOG0273|consen 314 FEF--HSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIG-HHGEVNALKW-NPTGS---------LLASCSD 379 (524)
T ss_pred eee--ccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeec-ccCceEEEEE-CCCCc---------eEEEecC
Confidence 765 555546677753 45788999999999999999999999998 8889999999 77655 8999999
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+++++|......|..-+..+ ...|+.+.|+|.
T Consensus 380 D~TlkiWs~~~~~~~~~l~~H-----------------------------------------------skei~t~~wsp~ 412 (524)
T KOG0273|consen 380 DGTLKIWSMGQSNSVHDLQAH-----------------------------------------------SKEIYTIKWSPT 412 (524)
T ss_pred CCeeEeeecCCCcchhhhhhh-----------------------------------------------ccceeeEeecCC
Confidence 999999998877665555432 225666777665
Q ss_pred C----------cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHh
Q 000470 1363 G----------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLA 1432 (1472)
Q Consensus 1363 g----------~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 1432 (1472)
| .+++++.|++|++||+..+...+.+.
T Consensus 413 g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~------------------------------------------- 449 (524)
T KOG0273|consen 413 GPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM------------------------------------------- 449 (524)
T ss_pred CCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec-------------------------------------------
Confidence 4 58899999999999998876654432
Q ss_pred hhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1433 AAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1433 ~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|++.|.+|+ |+++|++++||+.||.|.||.
T Consensus 450 --------kH~~pVysva-fS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 450 --------KHQEPVYSVA-FSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred --------cCCCceEEEE-ecCCCcEEEecCCCCeeEecc
Confidence 2999999996 999999999999999999994
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-26 Score=263.33 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=158.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.+++.++.|++.||.|||++||+||||||+||+++.
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~ 138 (280)
T cd06611 59 CKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL 138 (280)
T ss_pred CCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC
Confidence 579999999999999999999999999 599999876 346999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+.... .....++.++|+||+||++|||++|++
T Consensus 139 ~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~-----~~~~~~~~~sDi~slG~il~~l~~g~~ 206 (280)
T cd06611 139 DGDVKLADFGVSAKNKSTLQ-------KRDTFIGTPYWMAPEVVACET-----FKDNPYDYKADIWSLGITLIELAQMEP 206 (280)
T ss_pred CCCEEEccCccchhhccccc-------ccceeecchhhcCHHHHhhcc-----cCCCCCCccccHHHHHHHHHHHHhCCC
Confidence 99999999998764321111 012234678899999875321 123467889999999999999999999
Q ss_pred CCCchHHHH-HHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA-YRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... +...... +....+...+..+.++|.+||+.||.+||+++++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 207 PHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 996543222 1111111 1112234556789999999999999999999999988
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-26 Score=267.03 Aligned_cols=199 Identities=17% Similarity=0.153 Sum_probs=157.0
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+||||++ |+|.+++..+. .++..++..++.|++.||+|||++|+
T Consensus 82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 161 (307)
T cd05098 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC 161 (307)
T ss_pred CCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 69999999999999999999999999 69999997532 47889999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+||+++.++.++|+|||.++....... ........++..|+|||.+. +..++.++|||
T Consensus 162 ~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dvw 226 (307)
T cd05098 162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALF----------DRIYTHQSDVW 226 (307)
T ss_pred ccccccHHheEEcCCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhc----------cCCCCcHHHHH
Confidence 9999999999999999999999998875421110 00001122345799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
|+||++|||++ |.+||........... ........+...+..+.+||.+||..+|++||++.++++++...
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 99999999998 7888875544332211 11112233445677899999999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=264.13 Aligned_cols=193 Identities=19% Similarity=0.174 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|+||||++ ++|.+++... .+++.++..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~ 152 (296)
T cd06654 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152 (296)
T ss_pred CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC
Confidence 479999999999999999999999999 6999998754 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. ...++.++||||+||++|+|++|++|
T Consensus 153 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~s~Gvil~~l~~g~~p 215 (296)
T cd06654 153 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPP 215 (296)
T ss_pred CCEEECccccchhcccccc-------ccCcccCCccccCHHHHc----------CCCCCccchHHHHHHHHHHHHhCCCC
Confidence 9999999998775421111 112234678899999764 23567899999999999999999999
Q ss_pred CCchHHHH-H-Hh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-Y-RR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~-~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... . .. ....+....+...+..+.++|.+||..||++||+++++++|
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 86543211 1 11 11111212334456789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=264.64 Aligned_cols=198 Identities=14% Similarity=0.084 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++..+...|++|||+. ++|.+++.... .+++..++.++.|++.||.|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 76 LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 579999999999999999999999999 69999997654 689999999999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+||+++.++.++|+|||.++...... .........++..|+|||.+. ...++.++|||||||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~ 220 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSD-----YYRVQGRAPLPIRWMAWESVL----------LGKFTTKSDVWAFGV 220 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCc-----ceeecCcCCCCceecCHHHhh----------cCCCCccchhhhhHH
Confidence 99999999999999999999887543221 111122334567899999764 235788999999999
Q ss_pred HHHHHHh--CCCCCCchHHHHH-H--hcC-----CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 149 VIAELFL--EVPFFELSHLLAY-R--RGQ-----YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 149 il~eLlt--g~~pf~~~~~~~~-~--~~~-----~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++|||++ +.+||........ . ... .......+...+.++.+++.+||+.||++||++.|+++.+.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 9999998 5777754322111 1 111 11111223345678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-26 Score=259.16 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|++|||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.
T Consensus 57 ~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~ 136 (262)
T cd06613 57 CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE 136 (262)
T ss_pred CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC
Confidence 589999999999999999999999999 5999998765 67999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ ......++..|+|||.+... ....++.++|+||+||++|||++|.+
T Consensus 137 ~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~-------~~~~~~~~~Di~slG~~l~~~~tg~~ 202 (262)
T cd06613 137 DGDVKLADFGVSAQLTATIA-------KRKSFIGTPYWMAPEVAAVE-------RKGGYDGKCDIWALGITAIELAELQP 202 (262)
T ss_pred CCCEEECccccchhhhhhhh-------ccccccCCccccCchhhccc-------ccCCcCchhhhHHHHHHHHHHHhCCC
Confidence 99999999998765422110 01223467789999987522 11367889999999999999999988
Q ss_pred CCCchH----HHHHHhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH----LLAYRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~----~~~~~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||.... ........+.+.. ......+.+++++|.+||..||.+||++.+++.|
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 203 PMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 885432 2222233222211 1222345679999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=264.76 Aligned_cols=196 Identities=15% Similarity=0.169 Sum_probs=156.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||+++++++...+..|++|||+. |+|.+++... ..+++.++..++.|++.||+|||++||+|+||||+|||++.
T Consensus 97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~ 176 (302)
T cd05055 97 NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH 176 (302)
T ss_pred CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC
Confidence 69999999999999999999999999 7999999753 23899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 177 ~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~t~g~ 241 (302)
T cd05055 177 GKIVKICDFGLARDIMNDSN-----YVVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGS 241 (302)
T ss_pred CCeEEECCCcccccccCCCc-----eeecCCCCcccccCCHhhhc----------cCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 99999999999875422110 11122334567899999764 3357889999999999999998 88
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||..... .+....... ...+...++.+++++.+||..+|++||++.|+++.+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 242 NPYPGMPVDSKFYKLIKEGYR--MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcCCCCchHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 88854321 122222211 12334456789999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=258.75 Aligned_cols=203 Identities=20% Similarity=0.162 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++.+......|+||||++ |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil 131 (268)
T cd05086 52 LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCF 131 (268)
T ss_pred cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEE
Confidence 579999999999999999999999999 6999999753 33667788899999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||++...... ..........++..|+|||.+...... .....++.++|||||||++|||++
T Consensus 132 ~~~~~~~~l~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~ 203 (268)
T cd05086 132 LTSDLTVKVGDYGIGPSRYKE-----DYIETEDDKCVPLRWLAPELVGEFHGG---LITAEQTKPSNVWALGVTLWELFE 203 (268)
T ss_pred EcCCccEEecccccccccCcc-----hhhhcccCCcCcccccCchhcccccCc---cccCCCCCcchhHHHHHHHHHHHh
Confidence 999999999999987532111 000111234567889999987532211 123356889999999999999997
Q ss_pred C-CCCCCchHHH-HHH---hc-CCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 156 E-VPFFELSHLL-AYR---RG-QYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 156 g-~~pf~~~~~~-~~~---~~-~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ .+||...... .+. +. ... +.+.+....++.+.+++..|+ .+|++||+++|+++.+
T Consensus 204 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 204 NAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 5 7788533221 111 11 111 223344456778999999999 6799999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=257.89 Aligned_cols=192 Identities=24% Similarity=0.335 Sum_probs=158.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.++...+++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||+.|++||||||+||+++
T Consensus 56 ~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~ 135 (256)
T cd08221 56 LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT 135 (256)
T ss_pred CCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe
Confidence 579999999999999999999999999 6999999764 4589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.+||+|||.++....... ......+++.|+|||.+. +..++.++|+||+||++|||++|.
T Consensus 136 ~~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~~y~ape~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08221 136 KAGLIKLGDFGISKILGSEYS-------MAETVVGTPYYMSPELCQ----------GVKYNFKSDIWALGCVLYELLTLK 198 (256)
T ss_pred CCCCEEECcCcceEEcccccc-------cccccCCCccccCHhhcC----------CCCCCCcchhHHHHHHHHHHHHCC
Confidence 999999999998875422111 123345788999999764 234678899999999999999999
Q ss_pred CCCCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||........ ..+... ..+...+..+.++|.+||..+|++||+++++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 199 RTFDATNPLNLVVKIVQGNYT---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCCCCCHHHHHHHHHcCCCC---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 89876543332 222222 12345567899999999999999999999999883
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=262.80 Aligned_cols=193 Identities=20% Similarity=0.211 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.++..|+||||++ ++|.+++.... .+++.+++.++.|++.||.|||++|++||||||+||+++
T Consensus 50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~ 129 (277)
T cd05577 50 VSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD 129 (277)
T ss_pred CCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence 579999999999999999999999999 69999997654 689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+...... .......++..|+|||.+. +..++.++||||+||++|+|++|+
T Consensus 130 ~~~~~~l~dfg~~~~~~~~--------~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 130 DHGNVRISDLGLAVELKGG--------KKIKGRAGTPGYMAPEVLQ----------GEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred CCCCEEEccCcchhhhccC--------CccccccCCCCcCCHHHhc----------CCCCCchhhhHHHHHHHHHHhhCC
Confidence 9999999999987654211 0112334577899999764 234788999999999999999999
Q ss_pred CCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 158 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
.||.... ...............+...++.++++|.+||+.||++|| ++.++++|
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 192 SPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 9986432 222333323223334555678999999999999999999 88889987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-26 Score=265.82 Aligned_cols=195 Identities=20% Similarity=0.275 Sum_probs=155.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+.|+|.+++.... .+++.+++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~ 138 (298)
T cd07841 59 LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD 138 (298)
T ss_pred cCCCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC
Confidence 57999999999999999999999999889999998765 79999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++........ .....+++.|+|||.+.. ...++.++||||+||++|||++|.++
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~e~~~g~~~ 202 (298)
T cd07841 139 GVLKLADFGLARSFGSPNRK-------MTHQVVTRWYRAPELLFG---------ARHYGVGVDMWSVGCIFAELLLRVPF 202 (298)
T ss_pred CCEEEccceeeeeccCCCcc-------ccccccceeeeCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence 99999999998765332211 112234677999997742 23568899999999999999999888
Q ss_pred CCchHHH----HHHhcCCCC------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL----AYRRGQYDP------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~----~~~~~~~~~------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...... ........+ ........+..+.++|.+||+.||++||++.|+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 203 LPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 8643211 111100000 000112335689999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=260.24 Aligned_cols=197 Identities=13% Similarity=0.068 Sum_probs=151.4
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccC-CcHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++... ...+++|||+. |+|.+++.. ...+++..+..++.||+.||+|||++||+||
T Consensus 57 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 136 (272)
T cd05075 57 FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHR 136 (272)
T ss_pred CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 5899999999876432 25789999999 799988732 2348899999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+|||++.++.++|+|||.++....... ........+++.|+|||.+. ...++.++||||||
T Consensus 137 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Di~slG 201 (272)
T cd05075 137 DLAARNCMLNENMNVCVADFGLSKKIYNGDY-----YRQGRIAKMPVKWIAIESLA----------DRVYTTKSDVWSFG 201 (272)
T ss_pred ccchhheEEcCCCCEEECCCCcccccCcccc-----eecCCcccCCcccCCHHHcc----------CCCcChHHHHHHHH
Confidence 9999999999999999999999876532111 00112223466799999764 34678899999999
Q ss_pred HHHHHHHh-CCCCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||...... .+..... ....+...+..++++|.+||+.||++|||++++++++..
T Consensus 202 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 202 VTMWEIATRGQTPYPGVENSEIYDYLRQGN--RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 99999999 68888643322 2222111 112233456789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-26 Score=270.27 Aligned_cols=196 Identities=16% Similarity=0.183 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
+||||+++++++.. +..+|++|||++ ++|.+++...
T Consensus 69 ~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (337)
T cd05054 69 HHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFI 148 (337)
T ss_pred cCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccc
Confidence 69999999998765 467899999999 6999998532
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCC
Q 000470 38 -------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 98 (1472)
Q Consensus 38 -------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~ 98 (1472)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~ 228 (337)
T cd05054 149 EDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 228 (337)
T ss_pred cCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc
Confidence 1478899999999999999999999999999999999999999999999999876522110
Q ss_pred CCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----HHHHHhcCC
Q 000470 99 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQY 173 (1472)
Q Consensus 99 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~ 173 (1472)
........++..|+|||.+. +..++.++||||+||++|||++ |.+||.... +........
T Consensus 229 -----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 293 (337)
T cd05054 229 -----YVRKGDARLPLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT 293 (337)
T ss_pred -----hhhccCCCCCccccCcHHhc----------CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC
Confidence 11112334456799999764 3468889999999999999998 898986422 111111111
Q ss_pred CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 174 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 174 ~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
....+...++++.+++.+||+.+|++||+++|+++++..
T Consensus 294 --~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 294 --RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred --CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 112334556789999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-26 Score=260.71 Aligned_cols=198 Identities=21% Similarity=0.241 Sum_probs=158.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......++|+||++ ++|.+++...+.+++..+..++.||+.||.|||++|++|+||||+||+++.+
T Consensus 60 l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 60 LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST 139 (268)
T ss_pred cCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 579999999999999999999999999 5999999887779999999999999999999999999999999999999877
Q ss_pred C-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 N-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 ~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+ .++|+|||.+.......... ..+.....++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 140 ~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~ 206 (268)
T cd06630 140 GQRLRIADFGAAARLAAKGTGA---GEFQGQLLGTIAFMAPEVLR----------GEQYGRSCDVWSVGCVIIEMATAKP 206 (268)
T ss_pred CCEEEEcccccccccccccccC---CccccccccccceeCHhHhc----------cCCCCcccchHHHHHHHHHHHhCCC
Confidence 6 69999999987553321111 11122345678899999764 2356789999999999999999998
Q ss_pred CCCchHH----HHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL----LAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~----~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ..+ ...........+...++.+.+++.+||..+|++||++.++++|
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 207 PWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 8863321 111 1111122233455567889999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-26 Score=263.28 Aligned_cols=196 Identities=22% Similarity=0.271 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|.+++.. ...+++.+++.++.||+.||+|||++||+|+||||+||+++.+
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 56 CQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD 135 (286)
T ss_pred CCCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence 579999999999999999999999997799999865 4568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.....+.. .......++..|+|||.+.. ...++.++||||+||++|||++|.++
T Consensus 136 ~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~ 200 (286)
T cd07832 136 GVLKIADFGLARLFSEEEP------RLYSHQVATRWYRAPELLYG---------ARKYDPGVDLWAVGCIFAELLNGSPL 200 (286)
T ss_pred CcEEEeeeeecccccCCCC------CccccccCcccccCceeeec---------cccCCchhHHHHHHHHHHHHHcCCcC
Confidence 9999999998876533211 11223457888999997742 23468899999999999999999888
Q ss_pred CCchHHHH----HHh---------------------cCCCCC-----cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRR---------------------GQYDPS-----QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~---------------------~~~~~~-----~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|....... ... ..+... .......+..+.+||.+||..||++||++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l 280 (286)
T cd07832 201 FPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEAL 280 (286)
T ss_pred cCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHh
Confidence 85432111 000 000000 001122357899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 281 ~h 282 (286)
T cd07832 281 RH 282 (286)
T ss_pred hC
Confidence 98
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=263.14 Aligned_cols=195 Identities=24% Similarity=0.361 Sum_probs=152.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~ 139 (291)
T cd07844 60 LKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER 139 (291)
T ss_pred CCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC
Confidence 5799999999999999999999999999999998753 468999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....+... .....++..|+|||.+.. ...++.++||||+||++|+|++|.+|
T Consensus 140 ~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~~g~~~ 203 (291)
T cd07844 140 GELKLADFGLARAKSVPSKT-------YSNEVVTLWYRPPDVLLG---------STEYSTSLDMWGVGCIFYEMATGRPL 203 (291)
T ss_pred CCEEECccccccccCCCCcc-------ccccccccccCCcHHhhc---------CcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988754322111 112234678999997642 23467899999999999999999999
Q ss_pred CCchH-----HHHHHhcCCC------------------------CCc--ccCCCCC--HHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSH-----LLAYRRGQYD------------------------PSQ--HLEKIPD--SGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~-----~~~~~~~~~~------------------------~~~--~l~~~~~--~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|.... ...+.+.... ... ......+ ..+.++|.+||+.||++||++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~ 283 (291)
T cd07844 204 FPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAA 283 (291)
T ss_pred CCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHH
Confidence 95332 1111000000 000 0001122 6788999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 284 e~l~~ 288 (291)
T cd07844 284 EAMKH 288 (291)
T ss_pred HHhcC
Confidence 99988
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=230.36 Aligned_cols=260 Identities=18% Similarity=0.263 Sum_probs=216.5
Q ss_pred Ccc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEE
Q 000470 1043 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1043 ~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~l 1121 (1472)
.|+ .++.-++.+.-....|-.++|+|.|+++|+|+-|..+.|+++...+.....+-...+.+|.+.+.|+.|.+ ..+|
T Consensus 81 vWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~i 159 (343)
T KOG0286|consen 81 VWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHI 159 (343)
T ss_pred EEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCce
Confidence 587 35666777777789999999999999999999999999999986644444455567889999999999987 5678
Q ss_pred EEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1122 as~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~ 1201 (1472)
+++|.|.+.-+||+++.. .+..+. .|..-|..+.+.|.+ ++.+++|+-|+..++||+|.+.+.+
T Consensus 160 lT~SGD~TCalWDie~g~-------------~~~~f~-GH~gDV~slsl~p~~--~ntFvSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQ-------------QTQVFH-GHTGDVMSLSLSPSD--GNTFVSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred EecCCCceEEEEEcccce-------------EEEEec-CCcccEEEEecCCCC--CCeEEecccccceeeeeccCcceeE
Confidence 899999999999998421 223333 444456677788853 6799999999999999999999999
Q ss_pred eeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1202 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1202 ~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
++.+ |.+.|++++|.|+|.-+++|+.|++.++||+|....+..+.+.. ..+|+++.| +- .|+++++|
T Consensus 224 tF~g--hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F-S~---------SGRlLfag 291 (343)
T KOG0286|consen 224 TFEG--HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF-SK---------SGRLLFAG 291 (343)
T ss_pred eecc--cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE-cc---------cccEEEee
Confidence 9987 99999999999999999999999999999999988888877543 457888887 43 36699999
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
..|..+.|||.-+++...++. +|...|.|+..+
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~-----------------------------------------------GHeNRvScl~~s 324 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLA-----------------------------------------------GHENRVSCLGVS 324 (343)
T ss_pred ecCCceeEeeccccceEEEee-----------------------------------------------ccCCeeEEEEEC
Confidence 999999999998888777765 344479999999
Q ss_pred CCC-cEEEccCCCeEEEEe
Q 000470 1361 PGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1361 p~g-~llTgg~Dg~IrlWD 1378 (1472)
|+| .+.||++|..+|+|.
T Consensus 325 ~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 325 PDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCcEEEecchhHheeecC
Confidence 999 566999999999994
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=262.14 Aligned_cols=199 Identities=17% Similarity=0.144 Sum_probs=154.9
Q ss_pred CCCCcceeeEEEE-----eCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQE-----TDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~-----~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+||||+++++++. .+...|+||||++ ++|.+++. ....+++..++.++.|++.||.|||+++|+||||||
T Consensus 73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 152 (286)
T cd06638 73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKG 152 (286)
T ss_pred cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCH
Confidence 6999999999873 4467999999998 69998875 235688999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.++|+|||.++...... .......|++.|+|||.+.... .....++.++||||+||++|
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvi~~ 220 (286)
T cd06638 153 NNILLTTEGGVKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQ-----QLDSTYDARCDVWSLGITAI 220 (286)
T ss_pred HhEEECCCCCEEEccCCceeecccCC-------CccccccCCCcccChhhhchhh-----hccccccchhhhhhHHHHHH
Confidence 99999999999999999987542111 0113345788999999875221 12345788999999999999
Q ss_pred HHHhCCCCCCchHH-HHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELFLEVPFFELSHL-LAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLltg~~pf~~~~~-~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||++|++||..... ..+...... +....+...+..++++|.+||+.||++||++.|+++|.
T Consensus 221 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 221 ELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 99999888754332 222221111 12223444567899999999999999999999999983
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=258.96 Aligned_cols=190 Identities=22% Similarity=0.249 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||++ ++|.+++.....+++.++..++.||+.||.|||+.|++||||||+||+++.+
T Consensus 54 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~ 133 (260)
T cd05611 54 GESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT 133 (260)
T ss_pred CCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 379999999999999999999999998 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++.... .....++..|+|||.+. +..++.++||||+|+++|+|++|.+|
T Consensus 134 ~~~~l~dfg~~~~~~~-----------~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 134 GHLKLTDFGLSRNGLE-----------NKKFVGTPDYLAPETIL----------GVGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred CcEEEeecccceeccc-----------cccCCCCcCccChhhhc----------CCCCcchhhhHHHHHHHHHHHHCCCC
Confidence 9999999998765321 11233567799999764 22468899999999999999999999
Q ss_pred CCchHHHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 160 FELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
|........ ...............++.+.++|.+||+.||++||++ +|++.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 193 FHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred CCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 965443322 2222222223344567889999999999999999955 788877
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=258.18 Aligned_cols=196 Identities=16% Similarity=0.139 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++......|+||||++ ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~ 138 (261)
T cd05148 59 LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG 138 (261)
T ss_pred CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc
Confidence 589999999999999999999999999 5999999763 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.+...... ........++..|+|||.+. ...++.++|||||||++|+|++ |
T Consensus 139 ~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 139 EDLVCKVADFGLARLIKED-------VYLSSDKKIPYKWTAPEAAS----------HGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred CCceEEEccccchhhcCCc-------cccccCCCCceEecCHHHHc----------cCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999988654211 11112333566799999764 3357789999999999999998 7
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+.||....... +...........+...++.+.+++.+||+.||++|||+.++++.+.
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 202 QVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 88986543221 1111111122234556788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=256.92 Aligned_cols=197 Identities=14% Similarity=0.108 Sum_probs=155.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||||+++++++.. ...|++|||++ ++|.+++..+. .+++..+..++.|++.||+|||++|++||||||+||+++
T Consensus 53 l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~ 131 (257)
T cd05040 53 LDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA 131 (257)
T ss_pred cCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe
Confidence 579999999999988 89999999998 79999997754 589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.+||+|||.++....... .........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 132 ~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Di~slG~~l~el~t~g 197 (257)
T cd05040 132 SDDKVKIGDFGLMRALPQNED----HYVMEEHLKVPFAWCAPESLR----------TRTFSHASDVWMFGVTLWEMFTYG 197 (257)
T ss_pred cCCEEEecccccccccccccc----ceecccCCCCCceecCHHHhc----------ccCcCchhhhHHHHHHHHHHHhCC
Confidence 999999999999876532211 111112334567899999764 3357889999999999999998 9
Q ss_pred CCCCCchHHHHH-HhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||........ .... .......+...+..+.+++.+||+.+|++||++.++++.+
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 198 EEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 989853322211 1111 1111223334567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=258.96 Aligned_cols=197 Identities=14% Similarity=0.145 Sum_probs=155.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.||+.||+|||++|++|+||||+
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ 135 (269)
T cd05044 56 FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAAR 135 (269)
T ss_pred cCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 579999999999999999999999999 699999864 234788999999999999999999999999999999
Q ss_pred CEEEccCC-----cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 73 NVLVTSWN-----WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 73 NILv~~~~-----~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||+++.++ .++|+|||+++........ .......++..|+|||.+. +..++.++||||||
T Consensus 136 nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG 200 (269)
T cd05044 136 NCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-----RKEGEGLLPVRWMAPESLL----------DGKFTTQSDVWSFG 200 (269)
T ss_pred eEEEecCCCCCCcceEECCccccccccccccc-----ccCcccCCCccccCHHHHc----------cCCcccchhHHHHH
Confidence 99999888 8999999998765322110 0112233467799999764 34578899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
|++|||++ |.+||........... ........+...+..+.++|.+||..+|.+||+++++++.+
T Consensus 201 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 267 (269)
T cd05044 201 VLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267 (269)
T ss_pred HHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 99999998 8888864332222111 11112223344567899999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=257.50 Aligned_cols=200 Identities=12% Similarity=0.113 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEE-eCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQE-TDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~-~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++. .++..|++|||+. |+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 53 l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~ 132 (262)
T cd05058 53 FSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD 132 (262)
T ss_pred CCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc
Confidence 58999999999765 4667899999999 7999999764 3467888899999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg- 156 (1472)
+++.+||+|||+++.......... .......++..|+|||.+. ...++.++|||||||++|||++|
T Consensus 133 ~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 133 ESFTVKVADFGLARDIYDKEYYSV---HNHTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred CCCcEEECCccccccccCCcceee---cccccCcCCccccChhHhc----------cCccchHHHHHHHHHHHHHHHcCC
Confidence 999999999999875432110000 0011223456799999764 23578899999999999999995
Q ss_pred CCCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||.............. .....+...++.+.+++.+||+.+|++||++.|+++.+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 200 APPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 788865443332221111 111223345678999999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=259.92 Aligned_cols=188 Identities=17% Similarity=0.110 Sum_probs=149.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..++||||++ ++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.+
T Consensus 56 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~ 131 (279)
T cd06619 56 CDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTR 131 (279)
T ss_pred CCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCC
Confidence 589999999999999999999999999 477544 246889999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++....... .....++..|+|||.+. +..++.++|+||+||++|+|++|..|
T Consensus 132 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~p 192 (279)
T cd06619 132 GQVKLCDFGVSTQLVNSI---------AKTYVGTNAYMAPERIS----------GEQYGIHSDVWSLGISFMELALGRFP 192 (279)
T ss_pred CCEEEeeCCcceeccccc---------ccCCCCChhhcCceeec----------CCCCCCcchHHHHHHHHHHHHhCCCC
Confidence 999999999987542211 12345788899999775 33578899999999999999999888
Q ss_pred CCchH-------HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-------LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-------~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ....... ............++.++++|.+||+.||++||+++|+++|
T Consensus 193 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 193 YPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred chhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 85311 0011111 1111111223456789999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=262.58 Aligned_cols=197 Identities=17% Similarity=0.180 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC------------------------CCCCHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLA 55 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qll~a 55 (1472)
++||||+++++.+..+...|+++||+. |+|.+++... ..+++..+..++.|++.|
T Consensus 60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~ 139 (290)
T cd05045 60 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG 139 (290)
T ss_pred CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999 6999988542 237888999999999999
Q ss_pred HHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCC
Q 000470 56 VKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135 (1472)
Q Consensus 56 L~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~ 135 (1472)
|.|||++||+||||||+|||+++++.++|+|||+++....... .. ......++..|+|||.+. +.
T Consensus 140 l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~----~~-~~~~~~~~~~y~apE~~~----------~~ 204 (290)
T cd05045 140 MQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS----YV-KRSKGRIPVKWMAIESLF----------DH 204 (290)
T ss_pred HHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc----hh-cccCCCCCccccCHHHHc----------cC
Confidence 9999999999999999999999999999999999875432111 00 011223456799999764 33
Q ss_pred CCCccchHHHHHHHHHHHHh-CCCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 136 PLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 136 ~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.++.++|||||||++|||++ |.+||....... ....... ...+...+.++++++.+||+.||++||++.|+++.
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 57889999999999999998 888887544333 2222222 22344566789999999999999999999999998
Q ss_pred hhc
Q 000470 212 YAA 214 (1472)
Q Consensus 212 ~~~ 214 (1472)
+..
T Consensus 283 l~~ 285 (290)
T cd05045 283 LEK 285 (290)
T ss_pred HHH
Confidence 654
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=268.52 Aligned_cols=203 Identities=19% Similarity=0.178 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+|+||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 56 l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~ 135 (328)
T cd08226 56 FRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS 135 (328)
T ss_pred CCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe
Confidence 579999999999999999999999999 6999998763 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++++||+.+.....................++..|+|||.+... ...++.++||||+||++|||++|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~~l~el~~g~ 207 (328)
T cd08226 136 GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD--------LYGYNVKSDIYSVGITACELATGR 207 (328)
T ss_pred CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC--------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999985432221111100000001112345679999987521 234788999999999999999999
Q ss_pred CCCCchHHHH-H---HhcC-CCC------------------------------------------CcccCCCCCHHHHHH
Q 000470 158 PFFELSHLLA-Y---RRGQ-YDP------------------------------------------SQHLEKIPDSGIRKM 190 (1472)
Q Consensus 158 ~pf~~~~~~~-~---~~~~-~~~------------------------------------------~~~l~~~~~~~l~~L 190 (1472)
+||....... + .... +.+ ........++.+.+|
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (328)
T cd08226 208 VPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNL 287 (328)
T ss_pred CCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHH
Confidence 9996432111 1 1000 000 000112235678999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 000470 191 ILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 191 I~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||+.||++|||++|+++|
T Consensus 288 i~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 288 VELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred HHHHccCCcccCCCHHHHhhC
Confidence 999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=257.89 Aligned_cols=197 Identities=17% Similarity=0.126 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.+.+..|+++||++ |+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil 138 (267)
T cd08228 59 LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEE
Confidence 579999999999999999999999999 699988752 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......+++.|+|||.+. +..++.++|+||+||++|||++
T Consensus 139 ~~~~~~~~l~d~g~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~el~~ 201 (267)
T cd08228 139 ITATGVVKLGDLGLGRFFSSKT-------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred EcCCCCEEECccccceeccchh-------HHHhcCCCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHhc
Confidence 9999999999999877542111 1112345678899999764 2356788999999999999999
Q ss_pred CCCCCCchH--HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSH--LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~--~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|..||.... ...+... .....+......+..++++|.+||+.+|++||++.++++.++.
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 202 LQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 977774321 1111111 1111112223456789999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=262.42 Aligned_cols=192 Identities=19% Similarity=0.198 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... .+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 73 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~ 151 (296)
T cd06655 73 LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMD 151 (296)
T ss_pred cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999988764 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. ...++.++|||||||++|+|++|.+|
T Consensus 152 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~~lltg~~p 214 (296)
T cd06655 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (296)
T ss_pred CCEEEccCccchhcccccc-------cCCCcCCCccccCcchhc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998775421110 112334678899999764 23567899999999999999999988
Q ss_pred CCchHHH----HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. ...... .+....+...++.+++||.+||..||++||++.++++|
T Consensus 215 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 215 YLNENPLRALYLIATNG-TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CCCCCHHHHHHHHHhcC-CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 8654321 122221 11222334456789999999999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=262.00 Aligned_cols=193 Identities=17% Similarity=0.205 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++.+..+...|++|||++ ++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 57 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~ 136 (285)
T cd05632 57 VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD 136 (285)
T ss_pred cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC
Confidence 579999999999999999999999999 599888854 33599999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||++...... . ......|+..|+|||.+. +..++.++|+||+||++|||++|.
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~---~-----~~~~~~g~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~g~ 198 (285)
T cd05632 137 DYGHIRISDLGLAVKIPEG---E-----SIRGRVGTVGYMAPEVLN----------NQRYTLSPDYWGLGCLIYEMIEGQ 198 (285)
T ss_pred CCCCEEEecCCcceecCCC---C-----cccCCCCCcCccChHHhc----------CCCCCcccchHHHHHHHHHHHhCC
Confidence 9999999999987643211 0 112345788999999764 345788999999999999999999
Q ss_pred CCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHH
Q 000470 158 PFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 211 (1472)
+||..... ..............+...+..+.+|+.+||+.||++||+ ++++++|
T Consensus 199 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 199 SPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 99964322 122222222223344456678999999999999999999 7888877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=262.93 Aligned_cols=197 Identities=22% Similarity=0.201 Sum_probs=149.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++......++|+||++ |+|.++|... ..+++.++..|+.||+.||.|||+++|+||||+++||+++
T Consensus 58 l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~ 137 (259)
T PF07714_consen 58 LRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD 137 (259)
T ss_dssp HSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999998888999999999 7999999876 6799999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.+||+|||+++..... ..............|+|||.+. ...++.++||||||+++|||++ |
T Consensus 138 ~~~~~Kl~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~aPE~~~----------~~~~~~ksDVysfG~~l~ei~~~~ 202 (259)
T PF07714_consen 138 SNGQVKLSDFGLSRPISEK-----SKYKNDSSQQLPLRYLAPEVLK----------DGEYTKKSDVYSFGMLLYEILTLG 202 (259)
T ss_dssp TTTEEEEESTTTGEETTTS-----SSEEESTTSESGGGGS-HHHHH----------HSEESHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccccccccccc-----cccccccccccccccccccccc----------cccccccccccccccccccccccc
Confidence 9999999999998765211 1111223334567799999775 2347899999999999999999 5
Q ss_pred CCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+.||.......+.... .......+...+..+.++|.+||..||++||++.++++.|
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 203 KFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 7888643332221111 1111223445678899999999999999999999999763
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=259.42 Aligned_cols=193 Identities=20% Similarity=0.161 Sum_probs=157.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... .+++.+++.++.|++.||.|||++|++||||+|+||+++++
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~ 134 (274)
T cd06609 56 CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEE 134 (274)
T ss_pred cCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999999876 68999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ .....++..|+|||.+. +..++.++||||+||++|+|++|.+|
T Consensus 135 ~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~sDv~slG~il~~l~tg~~p 197 (274)
T cd06609 135 GDVKLADFGVSGQLTSTMSK-------RNTFVGTPFWMAPEVIK----------QSGYDEKADIWSLGITAIELAKGEPP 197 (274)
T ss_pred CCEEEcccccceeecccccc-------cccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998765332111 12234577899999875 23478999999999999999999999
Q ss_pred CCchHHHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|......... .......+.+... .++.+.+++.+||..||++||+++++++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 198 LSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred cccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 9654322211 1111112222222 56789999999999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=257.57 Aligned_cols=195 Identities=14% Similarity=0.072 Sum_probs=154.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|++|||++ ++|.+++.. ...+++.....++.|++.||+|||+.|++||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~ 137 (261)
T cd05072 58 LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS 137 (261)
T ss_pred CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec
Confidence 579999999999999999999999998 699999965 34588899999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.+....... ........++..|+|||.+. ...++.++|||||||++|+|++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 138 ESLMCKIADFGLARVIEDNE------YTAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred CCCcEEECCCccceecCCCc------eeccCCCccceecCCHHHhc----------cCCCChhhhhhhhHHHHHHHHccC
Confidence 99999999999987542111 00112223456799999764 3357889999999999999998 8
Q ss_pred CCCCCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||....... ........ ......+..+.+++.+||..+|++||+++++++.++
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 202 KIPYPGMSNSDVMSALQRGYRM--PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 88986432221 11222211 122345678999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=264.61 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|+||||++ ++|.+++... .+++.++..++.|++.||.|||+.||+||||||+|||++.+
T Consensus 73 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~ 151 (297)
T cd06656 73 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMD 151 (297)
T ss_pred CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999998764 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. +..++.++|+||+||++|+|++|.+|
T Consensus 152 ~~~~l~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slGvil~~l~tg~~p 214 (297)
T cd06656 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (297)
T ss_pred CCEEECcCccceEccCCcc-------CcCcccCCccccCHHHHc----------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999998765421110 112335678899999764 33567899999999999999999999
Q ss_pred CCchHHHHH-Hh-c-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAY-RR-G-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~-~~-~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........ .. . ...+....+...+..+++||.+||..||++||+++++++|
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 215 YLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 865432111 11 0 1111222334556789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=261.66 Aligned_cols=195 Identities=25% Similarity=0.283 Sum_probs=152.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+||||+++ .|..++.....+++.+++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 57 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~ 136 (286)
T cd07847 57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ 136 (286)
T ss_pred CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCC
Confidence 5799999999999999999999999996 555555555669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 137 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~i~~~l~~g~~p 200 (286)
T cd07847 137 GQIKLCDFGFARILTGPGD-------DYTDYVATRWYRAPELLVG---------DTQYGPPVDVWAIGCVFAELLTGQPL 200 (286)
T ss_pred CcEEECccccceecCCCcc-------cccCcccccccCCHHHHhC---------CCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 9999999999876532211 0112335778999997642 23568899999999999999999999
Q ss_pred CCchHH----HHHHhc--------------------CCCCCc-c------cCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHL----LAYRRG--------------------QYDPSQ-H------LEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~----~~~~~~--------------------~~~~~~-~------l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|..... ...... ...+.. . .....+..+.+||.+||+.||++||++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei 280 (286)
T cd07847 201 WPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL 280 (286)
T ss_pred CCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence 964321 111110 000000 0 011235779999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
+.|
T Consensus 281 l~~ 283 (286)
T cd07847 281 LEH 283 (286)
T ss_pred hcC
Confidence 988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-26 Score=260.13 Aligned_cols=193 Identities=18% Similarity=0.220 Sum_probs=160.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||+. ++|.+++.....+++.++..++.||+.||.|||++|++|+||||+||+++++
T Consensus 57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 136 (258)
T cd05578 57 LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ 136 (258)
T ss_pred CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC
Confidence 589999999999999999999999999 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+....... ......++..|+|||.+. ...++.++|+||+||++|+|++|..|
T Consensus 137 ~~~~l~d~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p 198 (258)
T cd05578 137 GHVHITDFNIATKVTPDT--------LTTSTSGTPGYMAPEVLC----------RQGYSVAVDWWSLGVTAYECLRGKRP 198 (258)
T ss_pred CCEEEeecccccccCCCc--------cccccCCChhhcCHHHHc----------ccCCCCcccchhhHHHHHHHHhCCCC
Confidence 999999999876543221 112344677899999775 22478899999999999999999888
Q ss_pred CCchH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH--HHHHHH
Q 000470 160 FELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA--ESYLQN 211 (1472)
Q Consensus 160 f~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa--~elL~~ 211 (1472)
|.... ...+...........+...+..+.++|.+||+.||.+||++ .|+++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 199 YRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred CCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 87543 23333222223334455566889999999999999999999 998877
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=259.00 Aligned_cols=198 Identities=17% Similarity=0.151 Sum_probs=151.9
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. +...|++|||+. ++|.+++... .+++.+++.++.|++.||.|||++||+||||||+|||++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~ 141 (283)
T cd05080 63 LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141 (283)
T ss_pred CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc
Confidence 589999999998765 346899999999 6999999765 489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||+++....... .........++..|+|||.+. ...++.++|||||||++|||++|.
T Consensus 142 ~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 142 NDRLVKIGDFGLAKAVPEGHE----YYRVREDGDSPVFWYAVECLK----------ENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred CCCcEEEeecccccccCCcch----hhccCCCCCCCceeeCHhHhc----------ccCCCcccccHHHHHHHHHHHhCC
Confidence 999999999999876532111 000112233456799999764 235788999999999999999998
Q ss_pred CCCCchH--HHHHHhcCC--------------CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSH--LLAYRRGQY--------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~--~~~~~~~~~--------------~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||.... ......... ......+...+..+++++.+||+.||++||+++++++.+.
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred CCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 7775321 111110000 0011123345678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-26 Score=273.06 Aligned_cols=191 Identities=22% Similarity=0.330 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+ ...|+||||+.++|.+.+... +++.++..++.|++.||+|||++||+||||||+||
T Consensus 72 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Ni 149 (353)
T cd07850 72 VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 149 (353)
T ss_pred cCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 5899999999988654 357999999999999998765 89999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.++...... ......++..|+|||.+. +..++.++||||+||++|+|+
T Consensus 150 l~~~~~~~kL~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~ 211 (353)
T cd07850 150 VVKSDCTLKILDFGLARTAGTSF--------MMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMI 211 (353)
T ss_pred EECCCCCEEEccCccceeCCCCC--------CCCCCcccccccCHHHHh----------CCCCCCchhhHhHHHHHHHHH
Confidence 99999999999999987542211 112334678899999875 346788999999999999999
Q ss_pred hCCCCCCchHHH----HH----------------------HhcCC--CCC---ccc------------CCCCCHHHHHHH
Q 000470 155 LEVPFFELSHLL----AY----------------------RRGQY--DPS---QHL------------EKIPDSGIRKMI 191 (1472)
Q Consensus 155 tg~~pf~~~~~~----~~----------------------~~~~~--~~~---~~l------------~~~~~~~l~~LI 191 (1472)
+|+.||...+.. .+ ..... ... ... ....++.+++||
T Consensus 212 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 291 (353)
T cd07850 212 RGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL 291 (353)
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHH
Confidence 999888643211 00 00000 000 000 112345689999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 000470 192 LHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 192 ~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||+.||++||++.|+|+|
T Consensus 292 ~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 292 SKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999988
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=260.30 Aligned_cols=193 Identities=18% Similarity=0.108 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++..+ .+++..++.++.|++.||.|||++|++|+||||+||+++.+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~ 137 (277)
T cd06642 59 CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 137 (277)
T ss_pred CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC
Confidence 579999999999999999999999999 5999988754 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++|+||+||++|||++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06642 138 GDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIK----------QSAYDFKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEccccccccccCcch-------hhhcccCcccccCHHHhC----------cCCCchhhhHHHHHHHHHHHHhCCCC
Confidence 9999999998865422110 112234677899999764 23567899999999999999999988
Q ss_pred CCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|............ ......+....+..+.++|.+||+.+|++||++.++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 201 NSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 8643222111111 111223344556789999999999999999999999998
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=271.37 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------------------------------------------
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------------------------- 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------- 37 (1472)
.||||+++++++......|||||||+ |+|.+++..+
T Consensus 99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (400)
T cd05105 99 PHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYM 178 (400)
T ss_pred CCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccc
Confidence 39999999999999999999999999 7999987542
Q ss_pred -----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 38 -----------------------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 38 -----------------------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
..+++.++..++.||+.||+|||+.||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 258 (400)
T cd05105 179 DMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNC 258 (400)
T ss_pred ccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 137788889999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||+++........ .......++..|+|||.+. +..++.++|||
T Consensus 259 vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diw 323 (400)
T cd05105 259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIF----------DNLYTTLSDVW 323 (400)
T ss_pred eCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhc----------CCCCCchhhHH
Confidence 99999999999999999999999998754221110 1112233567799999764 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 145 AVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||++|||++ |..||.... .......... ...+...+..+.+++.+||+.||++||++.++.+.+..
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 99999999997 777775321 1111222211 22334556789999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=265.66 Aligned_cols=199 Identities=22% Similarity=0.317 Sum_probs=153.7
Q ss_pred CCCCCcceeeEEEEeCC--------eEEEEecccCCcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETDK--------AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~--------~~~lV~Ey~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
++||||+++++++.... ..|+||||+.++|.+.+.... .+++.+++.++.||+.||+|||++|++|+||||
T Consensus 68 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p 147 (310)
T cd07865 68 LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKA 147 (310)
T ss_pred CCCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 57999999999987654 459999999999999887653 689999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.+||+|||.+.......... ........++..|+|||.+.. ...++.++||||+||++|
T Consensus 148 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 148 ANILITKDGILKLADFGLARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDMWGAGCIMA 215 (310)
T ss_pred HHEEECCCCcEEECcCCCcccccCCcccC---CCCccCcccCccccCcHHhcC---------CcccCchhhhHHHHHHHH
Confidence 99999999999999999987664333221 111223346788999997642 224678999999999999
Q ss_pred HHHhCCCCCCchHHHHH----H--hcCCCC------------------C-------c-ccCCCCCHHHHHHHHHhcccCc
Q 000470 152 ELFLEVPFFELSHLLAY----R--RGQYDP------------------S-------Q-HLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 152 eLltg~~pf~~~~~~~~----~--~~~~~~------------------~-------~-~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
||++|.+||........ . .+...+ . . ....+.+..+++||.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 99999999864432110 0 010000 0 0 0112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++||+++|+++|
T Consensus 296 ~~R~t~~e~l~h 307 (310)
T cd07865 296 AKRIDADTALNH 307 (310)
T ss_pred hhccCHHHHhcC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=262.76 Aligned_cols=193 Identities=20% Similarity=0.227 Sum_probs=154.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||++ ++|.+++.. ..+++.+++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 75 l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~ 153 (297)
T cd06659 75 YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD 153 (297)
T ss_pred CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC
Confidence 579999999999999999999999999 589887765 458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++||||+||++|||++|++|
T Consensus 154 ~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p 216 (297)
T cd06659 154 GRVKLSDFGFCAQISKDVP-------KRKSLVGTPYWMAPEVIS----------RTPYGTEVDIWSLGIMVIEMVDGEPP 216 (297)
T ss_pred CcEEEeechhHhhcccccc-------cccceecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421111 012344678899999874 23568899999999999999999888
Q ss_pred CCchH-HHHHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+... ............+..+.++|.+||+.+|++||+++++++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 217 YFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 75332 2222221 1111112223456789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=262.01 Aligned_cols=195 Identities=23% Similarity=0.327 Sum_probs=153.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.++..|+||||+.++|.+++.. ...+++..++.++.|++.||+|||++|++||||||+||+++.
T Consensus 56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~ 135 (284)
T cd07860 56 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 135 (284)
T ss_pred cCCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence 579999999999999999999999999999998865 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.++....... ......++..|+|||.+.. ...++.++|||||||++|||++|++
T Consensus 136 ~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~ 199 (284)
T cd07860 136 EGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRA 199 (284)
T ss_pred CCCEEEeeccchhhcccCcc-------ccccccccccccCCeEEec---------CCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 99999999998765422211 0122345778999997742 2245788999999999999999998
Q ss_pred CCCchHH----HHHHhcCCCC-------------------------CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHL----LAYRRGQYDP-------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~----~~~~~~~~~~-------------------------~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||..... ....+....+ ........++.++++|.+||+.||++||++++++
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 200 LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 8854321 1111100000 0011223467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 280 ~~ 281 (284)
T cd07860 280 AH 281 (284)
T ss_pred cC
Confidence 88
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=261.14 Aligned_cols=195 Identities=23% Similarity=0.323 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.++...|++|||++++|.+++...+ .+++..+..++.|++.||+|||++|++||||+|+||+++.
T Consensus 55 l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~ 134 (283)
T cd07835 55 LNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR 134 (283)
T ss_pred cCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC
Confidence 57999999999999999999999999999999998765 6899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.++....+... .....++..|+|||.+.. ...++.++||||+||++|+|++|++
T Consensus 135 ~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~ 198 (283)
T cd07835 135 EGALKLADFGLARAFGVPVRT-------YTHEVVTLWYRAPEILLG---------SRQYSTPVDIWSIGCIFAEMVNRRP 198 (283)
T ss_pred CCcEEEeecccccccCCCccc-------cCccccccCCCCCceeec---------CcccCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999998654322111 122245778999997642 2346788999999999999999999
Q ss_pred CCCchHH----HHHHhcCC-------------------------CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 159 FFELSHL----LAYRRGQY-------------------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 pf~~~~~----~~~~~~~~-------------------------~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
||..... ..+.+... ..........+..+.++|.+||+.||++||+++|++
T Consensus 199 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 199 LFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 9864321 11111000 000111223457899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 279 ~~ 280 (283)
T cd07835 279 QH 280 (283)
T ss_pred cC
Confidence 88
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=260.27 Aligned_cols=198 Identities=19% Similarity=0.152 Sum_probs=157.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
++||||+++++.+..++..|+||||++ ++|.+++... ..+++..+++++.||+.||.|||+ .||+||||||+||+
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil 135 (286)
T cd06622 56 AVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVL 135 (286)
T ss_pred cCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEE
Confidence 579999999999999999999999999 5998888763 368999999999999999999997 59999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+...... ...+..++..|+|||.+..... .....++.++||||+||++|+|++
T Consensus 136 ~~~~~~~~l~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~~l~~ 202 (286)
T cd06622 136 VNGNGQVKLCDFGVSGNLVAS---------LAKTNIGCQSYMAPERIKSGGP----NQNPTYTVQSDVWSLGLSILEMAL 202 (286)
T ss_pred ECCCCCEEEeecCCcccccCC---------ccccCCCccCccCcchhcCCCC----CccCCCCcccchHhHHHHHHHHHh
Confidence 999999999999987654211 1123446778999998753321 123457889999999999999999
Q ss_pred CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+.||....... +..........++...+++++++|.+||+.+|++||+++++++|
T Consensus 203 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 203 GRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 999985432211 11111122233444577899999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=260.82 Aligned_cols=198 Identities=15% Similarity=0.144 Sum_probs=153.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++..+...|+||||++ ++|.+++... +.+++.++..++.|++.||+|||++|++||
T Consensus 74 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~ 153 (295)
T cd05097 74 LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHR 153 (295)
T ss_pred CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 589999999999999999999999999 6999998643 236888999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||+++.++.+||+|||++....... .........++..|+|||.+. ...++.++||||||
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG 218 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFG 218 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCc-----ceeccCcCcCceeecChhhhc----------cCCcCchhhHHHHH
Confidence 999999999999999999999887542111 111112233466899999764 33578899999999
Q ss_pred HHHHHHHh--CCCCCCchHHHHHH-------h-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 148 CVIAELFL--EVPFFELSHLLAYR-------R-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 148 ~il~eLlt--g~~pf~~~~~~~~~-------~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++|||++ +..||......... . .........+...++.+.+|+.+||+.||++||+++++++.++
T Consensus 219 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 99999998 56777643222111 1 1111111233445678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-25 Score=256.13 Aligned_cols=196 Identities=23% Similarity=0.272 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++..+...|+|+||++ ++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||++
T Consensus 62 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~ 141 (268)
T cd06624 62 LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLV 141 (268)
T ss_pred cCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE
Confidence 589999999999999999999999999 6999999764 345 888899999999999999999999999999999999
Q ss_pred cc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 77 TS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 77 ~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
+. .+.++|+|||.+...... +.. .....++..|+|||.+... ...++.++|+||+|+++|+|++
T Consensus 142 ~~~~~~~~l~dfg~~~~~~~~--~~~-----~~~~~~~~~~~aPE~~~~~--------~~~~~~~~Dv~slGvvl~~l~~ 206 (268)
T cd06624 142 NTYSGVVKISDFGTSKRLAGI--NPC-----TETFTGTLQYMAPEVIDKG--------PRGYGAPADIWSLGCTIVEMAT 206 (268)
T ss_pred cCCCCeEEEecchhheecccC--CCc-----cccCCCCccccChhhhccc--------cccCCchhhhHHHHHHHHHHHh
Confidence 76 679999999987654211 111 1122467889999987421 2346789999999999999999
Q ss_pred CCCCCCchH---HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||.... ...+........+.++...++.+++|+.+||+.+|++||++.|+++|
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 207 GKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 988885322 11222222222334555667889999999999999999999999998
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=256.69 Aligned_cols=203 Identities=18% Similarity=0.162 Sum_probs=152.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++.+....|+||||++ |+|.+++... ..+++..++.++.|++.||+|||++|++||||||+||
T Consensus 52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~ni 131 (269)
T cd05087 52 LQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNC 131 (269)
T ss_pred CCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceE
Confidence 579999999999999999999999999 7999998642 2356778889999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.++..... ..........++..|+|||.+...... .....++.++||||+||++|||+
T Consensus 132 l~~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05087 132 LLTADLTVKIGDYGLSHNKYKE-----DYYVTPDQLWVPLRWIAPELVDEVHGN---LLVVDQTKESNVWSLGVTIWELF 203 (269)
T ss_pred EEcCCCcEEECCccccccccCc-----ceeecCCCcCCcccccCHhHhcccccc---ccccCCCccchhHHHHHHHHHHH
Confidence 9999999999999988643211 111111233457789999987532110 11234688999999999999999
Q ss_pred h-CCCCCCchHHH---HHH--hcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 L-EVPFFELSHLL---AYR--RGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 t-g~~pf~~~~~~---~~~--~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+ |.+||...... .+. ..... +.+.+....++.+++++.+|+ .+|++|||++|++..|
T Consensus 204 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 204 ELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred hCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 6 98888543211 111 11111 222233345678999999998 6899999999999764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=252.73 Aligned_cols=196 Identities=15% Similarity=0.064 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.|++.||.|||++|++||||||+||+++.
T Consensus 49 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~ 128 (250)
T cd05085 49 YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE 128 (250)
T ss_pred CCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC
Confidence 579999999999999999999999998 699999875 345899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||++........ .......++..|+|||.+. ...++.++||||+||++|++++ |.
T Consensus 129 ~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~~~~~g~ 192 (250)
T cd05085 129 NNVLKISDFGMSRQEDDGIY------SSSGLKQIPIKWTAPEALN----------YGRYSSESDVWSYGILLWETFSLGV 192 (250)
T ss_pred CCeEEECCCccceecccccc------ccCCCCCCcccccCHHHhc----------cCCCCchhHHHHHHHHHHHHhcCCC
Confidence 99999999998764321100 0011223356699999764 3356889999999999999998 88
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.||.......... .........+...+..+.+++.+||..+|++||++.|+++.+
T Consensus 193 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 193 CPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 8886443322211 111112223344568899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=258.42 Aligned_cols=195 Identities=23% Similarity=0.345 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.++|.+++.. ...+++.+++.++.||+.||.|||++||+|+||||+|||++.+
T Consensus 60 l~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~ 139 (291)
T cd07870 60 LKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYL 139 (291)
T ss_pred cCCCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCC
Confidence 579999999999999999999999999999888765 3458899999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||+++....+... .....++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 140 ~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~ 203 (291)
T cd07870 140 GELKLADFGLARAKSIPSQT-------YSSEVVTLWYRPPDVLLG---------ATDYSSALDIWGAGCIFIEMLQGQPA 203 (291)
T ss_pred CcEEEeccccccccCCCCCC-------CCCccccccccCCceeec---------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988754322111 122345788999997742 22467789999999999999999999
Q ss_pred CCchHH-----HHHHh--c--------------CCCC-------Cccc----CC-CCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 160 FELSHL-----LAYRR--G--------------QYDP-------SQHL----EK-IPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 160 f~~~~~-----~~~~~--~--------------~~~~-------~~~l----~~-~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
|..... .+... + .+.. ...+ .. ..+..+.+++.+||+.||++|||++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~ 283 (291)
T cd07870 204 FPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ 283 (291)
T ss_pred CCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHH
Confidence 863221 11000 0 0000 0000 00 1246789999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|++.|
T Consensus 284 ~~l~h 288 (291)
T cd07870 284 DALLH 288 (291)
T ss_pred HHhcC
Confidence 99988
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=254.74 Aligned_cols=200 Identities=18% Similarity=0.211 Sum_probs=160.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......|+|+||++ ++|.+++...+.+++.+++.++.|++.||.|||+.||+||||||+||+++.+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~ 135 (264)
T cd06626 56 LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN 135 (264)
T ss_pred CCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 6999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.......... ...+....++..|+|||.+.... ...++.++||||+||++|+|++|.+|
T Consensus 136 ~~~kl~d~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~-------~~~~~~~~Dv~s~G~il~~l~~g~~p 205 (264)
T cd06626 136 GVIKLGDFGCAVKLKNNTTTM---GEEVQSLAGTPAYMAPEVITGGK-------GKGHGRAADIWSLGCVVLEMATGKRP 205 (264)
T ss_pred CCEEEcccccccccCCCCCcc---cccccCCcCCcCccChhhccCCC-------CCCCCcccchHHHHHHHHHHHhCCCC
Confidence 999999999987653322211 11123455678899999875221 13478899999999999999999989
Q ss_pred CCch-HH--HHHHhcCCCCCcccCCC--CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS-HL--LAYRRGQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~-~~--~~~~~~~~~~~~~l~~~--~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... .. ..+.... .....++.. .++.+.++|.+||+.+|++||++++++.|
T Consensus 206 f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 206 WSELDNEFQIMFHVGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ccCCcchHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 8533 11 1122221 222233333 37789999999999999999999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=253.27 Aligned_cols=198 Identities=16% Similarity=0.110 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus 49 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~ 128 (251)
T cd05041 49 YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE 128 (251)
T ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC
Confidence 579999999999999999999999998 699999965 345889999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++...... +.........+..|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 129 ~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~i~~~l~t~~~ 193 (251)
T cd05041 129 NNVLKISDFGMSREEEGGI-----YTVSDGLKQIPIKWTAPEALN----------YGRYTSESDVWSYGILLWETFSLGD 193 (251)
T ss_pred CCcEEEeeccccccccCCc-----ceeccccCcceeccCChHhhc----------cCCCCcchhHHHHHHHHHHHHhccC
Confidence 9999999999887542110 000001122345699999764 3357889999999999999999 68
Q ss_pred CCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+||............ .......+...+..+.+++.+||..+|++||+++|+++.+.
T Consensus 194 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 194 TPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 888654322222111 11122234455678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=255.00 Aligned_cols=194 Identities=21% Similarity=0.253 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||++ ++|.+++...+.+++.++..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~ 138 (258)
T cd06632 59 LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN 138 (258)
T ss_pred cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 579999999999999999999999999 5999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||+|||.+....... ......++..|+|||.+.. ...++.++|+||+||++|+|++|.+|
T Consensus 139 ~~~kl~d~~~~~~~~~~~--------~~~~~~~~~~y~~pe~~~~---------~~~~~~~~D~~slG~~l~~l~~g~~p 201 (258)
T cd06632 139 GVVKLADFGMAKQVVEFS--------FAKSFKGSPYWMAPEVIAQ---------QGGYGLAADIWSLGCTVLEMATGKPP 201 (258)
T ss_pred CCEEEccCccceeccccc--------cccccCCCcceeCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 999999999876542211 1234456788999997642 11378899999999999999999999
Q ss_pred CCchHH-HHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..... ... ...........+...++.+++++.+||+.+|++||+++++++|
T Consensus 202 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 202 WSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 864332 111 1111122233455667889999999999999999999999988
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=258.13 Aligned_cols=201 Identities=21% Similarity=0.241 Sum_probs=157.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.++..|+++||++ ++|.+++...+.+++.++..++.||+.||.|||++|++||||+|+||+++.+
T Consensus 50 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~ 129 (265)
T cd05579 50 AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN 129 (265)
T ss_pred CCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC
Confidence 479999999999999999999999998 5999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCC-CCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDP-SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~-~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
+.++|+|||++.......... ...........++..|+|||.+. ...++.++|+|||||++|+|++|.+
T Consensus 130 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~ 199 (265)
T cd05579 130 GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL----------GQGHSKTVDWWSLGCILYEFLVGIP 199 (265)
T ss_pred CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhc----------CCCCCcchhhHHHHHHHHHHHhCCC
Confidence 999999999877543321100 00000112234567899999764 2246789999999999999999999
Q ss_pred CCCchHHHHHHhcCCCCCcccCCC--CCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~~~~~~~~~~~~l~~~--~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
||...................+.. .+..+.+++.+||+.+|++||++ .++++|
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 200 PFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 987554333221111111112222 36789999999999999999999 999987
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=265.88 Aligned_cols=199 Identities=16% Similarity=0.141 Sum_probs=156.1
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
+||||+++++++..+...|+++||++ |+|.+++..+. .++..++..++.|++.||.|||++||
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 155 (334)
T cd05100 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC 155 (334)
T ss_pred CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 69999999999999999999999998 69999997532 37788899999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHH
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.++|+|||.++....... ........++..|+|||.+. ...++.++|||
T Consensus 156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~ 220 (334)
T cd05100 156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVW 220 (334)
T ss_pred eccccccceEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhc----------cCCcCchhhhH
Confidence 9999999999999999999999998875421110 00111222345799999774 34578899999
Q ss_pred HHHHHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 145 SlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
||||++|||++ |.+||............ .......+...+..+.+++.+||+.+|++||++.|++++++..
T Consensus 221 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 221 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 99999999998 78888654433332211 1111223345567899999999999999999999999997544
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=258.28 Aligned_cols=198 Identities=18% Similarity=0.092 Sum_probs=153.9
Q ss_pred CCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 2 SSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
+||||+++++++.... ..|+||||++ ++|.+++.. +..+++.+++.++.|++.||.|||++|++||||+
T Consensus 61 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~ 140 (275)
T cd06608 61 NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIK 140 (275)
T ss_pred CCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 6999999999997644 5899999999 599998864 3468999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.+........ ......++..|+|||.+.... .....++.++|||||||++
T Consensus 141 p~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il 208 (275)
T cd06608 141 GQNILLTKNAEVKLVDFGVSAQLDSTLG-------RRNTFIGTPYWMAPEVIACDE-----QPDASYDARSDVWSLGITA 208 (275)
T ss_pred HHHEEEccCCeEEECCCccceecccchh-------hhcCccccccccCHhHhcccc-----cccCCccccccHHHhHHHH
Confidence 9999999999999999998765422111 112344678899999875332 1234678899999999999
Q ss_pred HHHHhCCCCCCchH-HHHHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 151 AELFLEVPFFELSH-LLAYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 151 ~eLltg~~pf~~~~-~~~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+|++|.+||.... .............. .+...+..+++||.+||..||++|||++|+++|
T Consensus 209 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 209 IELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 99999999986332 12222211111111 122245689999999999999999999999988
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=262.34 Aligned_cols=195 Identities=24% Similarity=0.295 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ...|+||||+.++|.+++.. +..+++.+++.++.||+.||.|||++|++||||||+||+++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~ 142 (309)
T cd07845 63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT 142 (309)
T ss_pred CCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 5799999999999765 56899999999999998875 45689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++........ .....++..|+|||.+.+ ...++.++||||+||++|||++|.
T Consensus 143 ~~~~~kL~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~ 206 (309)
T cd07845 143 DKGCLKIADFGLARTYGLPAKP-------MTPKVVTLWYRAPELLLG---------CTTYTTAIDMWAVGCILAELLAHK 206 (309)
T ss_pred CCCCEEECccceeeecCCccCC-------CCcccccccccChhhhcC---------CCCcCchHHHHHHHHHHHHHHhCC
Confidence 9999999999998765322110 112234677999997742 235688999999999999999999
Q ss_pred CCCCchHHHH----HHhcCC-------------------CCC-cc------cCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 158 PFFELSHLLA----YRRGQY-------------------DPS-QH------LEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~-------------------~~~-~~------l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
+||....... +..... ... .. .....++.+.+||.+||+.||++|||++|
T Consensus 207 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~ 286 (309)
T cd07845 207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE 286 (309)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence 9996443221 111000 000 00 01124678899999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+++|
T Consensus 287 il~h 290 (309)
T cd07845 287 ALES 290 (309)
T ss_pred HhcC
Confidence 9998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=255.32 Aligned_cols=197 Identities=15% Similarity=0.120 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.+++..|+||||++ ++|.+++... +.+++.++..++.|++.||.|||++|++||||||+|||++.
T Consensus 62 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 141 (267)
T cd05066 62 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS 141 (267)
T ss_pred CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC
Confidence 579999999999999999999999998 6999999764 45899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... .........++..|+|||.+. ...++.++|+||+||++||+++ |.
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~ell~~g~ 207 (267)
T cd05066 142 NLVCKVSDFGLSRVLEDDPE----AAYTTRGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGE 207 (267)
T ss_pred CCeEEeCCCCcccccccccc----eeeecCCCccceeecCHhHhc----------cCccCchhhhHHHHHHHHHHhcCCC
Confidence 99999999998875532111 111111222356799999774 3457889999999999999886 88
Q ss_pred CCCCchHHH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||...... ......+. ...+...++.+.+++.+||+.+|.+||++.++++.+.
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 208 RPYWEMSNQDVIKAIEEGYR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCcccCCHHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 888543221 11111111 1223345678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=259.94 Aligned_cols=198 Identities=19% Similarity=0.097 Sum_probs=153.7
Q ss_pred CCCCcceeeEEEEe------CCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 2 SSTPCVHKKFWQET------DKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~------~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
+||||+++++++.. +...|++|||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+
T Consensus 71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ 150 (282)
T cd06636 71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQ 150 (282)
T ss_pred CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 69999999999853 467899999999 5999998753 34888899999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+++.++.++|+|||.+......... .....++..|+|||.+.... .....++.++|+|||||++||
T Consensus 151 nili~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~l~~~~-----~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 151 NVLLTENAEVKLVDFGVSAQLDRTVGR-------RNTFIGTPYWMAPEVIACDE-----NPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred HEEECCCCCEEEeeCcchhhhhccccC-------CCcccccccccCHhhcCccc-----CcCcCCCcccchhHHHHHHHH
Confidence 999999999999999987654221111 12344678899999875321 124567889999999999999
Q ss_pred HHhCCCCCCch-HHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFELS-HLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~~~-~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++|.+||... ....+...... .........+..+.+||.+||+.||.+||++.|+++|
T Consensus 219 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 219 MAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 99998888533 22222111111 1111223456789999999999999999999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-25 Score=257.55 Aligned_cols=193 Identities=18% Similarity=0.114 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.++...|+||||++ ++|.+++... .+++.++..++.|++.||+|||+.|++|+||+|+||+++.+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~ 137 (277)
T cd06640 59 CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 137 (277)
T ss_pred CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC
Confidence 579999999999999999999999999 5999999765 48999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ ......++..|+|||.+. +..++.++|+|||||++|||++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~apE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06640 138 GDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIQ----------QSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEcccccceeccCCcc-------ccccccCcccccCHhHhc----------cCCCccHHHHHHHHHHHHHHHHCCCC
Confidence 9999999998865422110 112234577799999764 33568899999999999999999999
Q ss_pred CCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|........... .....+.+....+..+.++|.+||+.+|++||+++++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 201 NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 864432221111 1111223444456789999999999999999999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=255.30 Aligned_cols=191 Identities=20% Similarity=0.186 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...|+||||++ |+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.
T Consensus 58 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~ 136 (259)
T cd05037 58 LSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVAR 136 (259)
T ss_pred CCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEec
Confidence 579999999999888 77899999999 69999998765 6899999999999999999999999999999999999998
Q ss_pred CC-------cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 79 WN-------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 79 ~~-------~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
++ .++|+|||.+...... ....++..|+|||.+... ...++.++||||+||++|
T Consensus 137 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~--------~~~~~~~~Di~slG~~~~ 197 (259)
T cd05037 137 YGLNEGYVPFIKLSDPGIPITVLSR-----------EERVERIPWIAPECIRNG--------QASLTIAADKWSFGTTLL 197 (259)
T ss_pred CccccCCceeEEeCCCCcccccccc-----------cccccCCCccChhhhcCC--------CCCcchhhHHHHHHHHHH
Confidence 87 7999999988754220 122345679999987521 136788999999999999
Q ss_pred HHHhC-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 152 ELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 152 eLltg-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||++| .+||........... +......+......+.++|.+||..+|++||++.++++.+
T Consensus 198 ~l~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 198 EICSNGEEPLSTLSSSEKERF-YQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHhCCCCCcccCCchhHHHH-HhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 99995 777754322111110 0011112222236899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=260.04 Aligned_cols=197 Identities=16% Similarity=0.099 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNIL 75 (1472)
++||||+++++++..+...|++|||++|+|.+++.. ...+++..++.++.||+.||+|||++ +++||||||+||+
T Consensus 57 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil 136 (283)
T cd06617 57 VDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136 (283)
T ss_pred cCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence 479999999999999999999999999999888753 34689999999999999999999997 9999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.+||+|||.+....... ......++..|+|||.+.... ....++.++|+||+||++|+|++
T Consensus 137 ~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~~l~~l~~ 202 (283)
T cd06617 137 INRNGQVKLCDFGISGYLVDSV--------AKTIDAGCKPYMAPERINPEL------NQKGYDVKSDVWSLGITMIELAT 202 (283)
T ss_pred ECCCCCEEEeeccccccccccc--------ccccccCCccccChhhcCCcc------cccccCccccchhhHHHHHHHHh
Confidence 9999999999999886542110 011234577899999875321 12457889999999999999999
Q ss_pred CCCCCCch--HHHHHHhcCCCCCcccC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELS--HLLAYRRGQYDPSQHLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~--~~~~~~~~~~~~~~~l~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|+.||... ....+..........++ ...+..++++|.+||..+|++||+++++++|
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 203 GRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 98888531 12222221111111122 2356789999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=255.36 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=157.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.....|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||||+||+++.+
T Consensus 65 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~ 144 (272)
T cd06629 65 LDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD 144 (272)
T ss_pred cCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC
Confidence 579999999999999999999999998 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++........ .......++..|+|||.+... ...++.++|+|||||++|+|++|.+|
T Consensus 145 ~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~--------~~~~~~~~Dv~slG~~l~~l~~g~~p 211 (272)
T cd06629 145 GICKISDFGISKKSDDIYDN-----DQNMSMQGSVFWMAPEVIHSY--------SQGYSAKVDIWSLGCVVLEMFAGRRP 211 (272)
T ss_pred CeEEEeeccccccccccccc-----cccccccCCccccCHHHhccc--------cCCCCccchhHHHHHHHHHHHhCCCC
Confidence 99999999988754211110 011234467889999987522 12478899999999999999999888
Q ss_pred CCchHH-HHHHh---cCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHL-LAYRR---GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~-~~~~~---~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+. ..+.. .... .........+..++++|.+||..+|++||+++++++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 212 WSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 864332 22211 1111 1112223346789999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=258.22 Aligned_cols=192 Identities=20% Similarity=0.140 Sum_probs=156.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+++||++ ++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~ 135 (265)
T cd06605 56 CNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN 135 (265)
T ss_pred CCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC
Confidence 479999999999999999999999999 6999999865 678999999999999999999999 9999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+.....+.. ....++..|+|||.+. +..++.++||||+||++|+|++|.
T Consensus 136 ~~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~ 196 (265)
T cd06605 136 SRGQIKLCDFGVSGQLVNSLA---------KTFVGTSSYMAPERIQ----------GNDYSVKSDIWSLGLSLIELATGR 196 (265)
T ss_pred CCCCEEEeecccchhhHHHHh---------hcccCChhccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999998765422111 1144677899999764 236788999999999999999998
Q ss_pred CCCCch-----HHHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELS-----HLLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~-----~~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||... ...... .........++.. .+..++++|.+||..||++||++.|++.|
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 197 FPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 888543 222221 1111122223322 67789999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=258.13 Aligned_cols=196 Identities=16% Similarity=0.186 Sum_probs=155.7
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP--------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~--------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++.. +...++++||+. ++|.+++... ..+++.++..++.|++.||+|||++|++|||||
T Consensus 65 l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 65 LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 589999999998765 567899999998 7999998652 358999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.+||+|||+++..... +.........++..|+|||.+. ...++.++|||||||++
T Consensus 145 p~nil~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l 209 (280)
T cd05043 145 ARNCVIDEELQVKITDNALSRDLFPM-----DYHCLGDNENRPVKWMALESLV----------NKEYSSASDVWSFGVLL 209 (280)
T ss_pred HhhEEEcCCCcEEECCCCCcccccCC-----ceEEeCCCCCcchhccCHHHHh----------cCCCCchhhHHHhHHHH
Confidence 99999999999999999998755321 1111122334566799999774 33578899999999999
Q ss_pred HHHHh-CCCCCCchHHHHHH---hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 151 AELFL-EVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
||+++ |++||.......+. ...+.. ..+...++.+.+++.+||..||++||++.++++.+.
T Consensus 210 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 210 WELMTLGQTPYVEIDPFEMAAYLKDGYRL--AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHhcCCCCCcCcCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 99998 89999654333322 222222 123345678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=255.14 Aligned_cols=196 Identities=20% Similarity=0.215 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+.||||+++++++.++ ...|++|||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~ 140 (265)
T cd06652 61 LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD 140 (265)
T ss_pred cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec
Confidence 5799999999998763 57889999998 69999998777789999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+............ .....++..|+|||.+. +..++.++|||||||++|||++|+
T Consensus 141 ~~~~~~l~Dfg~~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~ 206 (265)
T cd06652 141 SVGNVKLGDFGASKRLQTICLSGTG----MKSVTGTPYWMSPEVIS----------GEGYGRKADIWSVGCTVVEMLTEK 206 (265)
T ss_pred CCCCEEECcCccccccccccccccc----cccCCCCccccChhhhc----------CCCCCcchhHHHHHHHHHHHhhCC
Confidence 9999999999988754322111111 12234678899999764 235688999999999999999999
Q ss_pred CCCCchH-HHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... ...+...... .....+...+..+.++|.+|+. +|++||+++|+++|
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 207 PPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 8886432 2222222222 2233444556789999999994 99999999999988
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=273.94 Aligned_cols=198 Identities=16% Similarity=0.169 Sum_probs=160.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGIC 65 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIv 65 (1472)
|+|||||+|++++..++..|||+|||. |||.++|..+ +.|+..+...|+.||+.|++||-++.+|
T Consensus 546 l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FV 625 (774)
T KOG1026|consen 546 LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFV 625 (774)
T ss_pred ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCccc
Confidence 689999999999999999999999999 9999999542 2388999999999999999999999999
Q ss_pred ecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 66 H~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
||||-..|+||.+.-.|||+|||+++.+|..+ +-.......-...|||||-+. .++++.++||||
T Consensus 626 HRDLATRNCLVge~l~VKIsDfGLsRdiYssD-----YYk~~~~t~lPIRWMppEsIl----------y~kFTteSDVWs 690 (774)
T KOG1026|consen 626 HRDLATRNCLVGENLVVKISDFGLSRDIYSSD-----YYKVRGNTLLPIRWMPPESIL----------YGKFTTESDVWS 690 (774)
T ss_pred ccchhhhhceeccceEEEecccccchhhhhhh-----hhcccCCceeeeecCCHHHhh----------cCcccchhhhhh
Confidence 99999999999999999999999999876432 111111112246799999876 458999999999
Q ss_pred HHHHHHHHHh-C-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 146 VGCVIAELFL-E-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 146 lG~il~eLlt-g-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+|++|||+|+ | +|.|..++.+.+..........-+...+.++.+|+..||+.+|++||++.||-..++
T Consensus 691 ~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 691 FGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 9999999998 5 455555543332221111113456778899999999999999999999999987754
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=253.51 Aligned_cols=315 Identities=19% Similarity=0.274 Sum_probs=233.3
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCC--EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~--~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
-..|+- .|.+.++|+||.+.|.++.|+|+-. .|++|+.|++|++||..+... +..+...|.+.|++++|.++
T Consensus 129 v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t-----cl~~~~~H~S~vtsL~~~~d 203 (775)
T KOG0319|consen 129 VKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT-----CLHTMILHKSAVTSLAFSED 203 (775)
T ss_pred EEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch-----HHHHHHhhhhheeeeeeccC
Confidence 357995 6789999999999999999999765 689999999999999986432 34566678889999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccccc-----------------C----C----------Cc----------------------
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISR-----------------G----L----------GN---------------------- 1144 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~-----------------~----~----------~~---------------------- 1144 (1472)
++.++++|.|..+.|||...... . . |.
T Consensus 204 ~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e 283 (775)
T KOG0319|consen 204 SLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEE 283 (775)
T ss_pred CceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchh
Confidence 99999999999999999852100 0 0 00
Q ss_pred -----------------------------------cccccC--------------------cccceeec---------CC
Q 000470 1145 -----------------------------------VEKYSG--------------------ISDIKKKD---------TK 1160 (1472)
Q Consensus 1145 -----------------------------------~~~~~~--------------------~~~~~~~~---------~~ 1160 (1472)
..+|+. ...+|.+. ..
T Consensus 284 ~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~G 363 (775)
T KOG0319|consen 284 IDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPG 363 (775)
T ss_pred hhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeC
Confidence 000000 00011111 11
Q ss_pred CCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc--cceeecCCCccceEEEEEcCCC-CEEEEEeCCCcEEEEE
Q 000470 1161 EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN--TWTLKAIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWD 1237 (1472)
Q Consensus 1161 ~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~--~~~l~~~~h~g~Itsl~~sp~g-~~LvsGssdG~I~lWD 1237 (1472)
|.+.|..+.... +|..|++|+.|.++++|-+..+.. ...-...+|.+.|.+++++..+ ..|+++|.|+++++|+
T Consensus 364 H~e~vlSL~~~~---~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~ 440 (775)
T KOG0319|consen 364 HTEAVLSLDVWS---SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWD 440 (775)
T ss_pred chhheeeeeecc---cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEec
Confidence 122222222111 256999999999999998843322 1122334589999999997755 7899999999999999
Q ss_pred CCCCccc--------ceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1238 LRFLVPV--------NSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1238 lr~~~~i--------~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
++..+.. ......|...|+++.. .|+.. ++++|+.|.+.++|+++.+....+++
T Consensus 441 l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vai-a~ndk---------LiAT~SqDktaKiW~le~~~l~~vLs-------- 502 (775)
T KOG0319|consen 441 LPKSKETAFPIVLTCRYTERAHDKDINCVAI-APNDK---------LIATGSQDKTAKIWDLEQLRLLGVLS-------- 502 (775)
T ss_pred CCCcccccccceehhhHHHHhhcccccceEe-cCCCc---------eEEecccccceeeecccCceEEEEee--------
Confidence 9862211 1123346667888888 76654 89999999999999999777766665
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
+|..+|+|+.|++.. .++|++.|++|++|.+.+.++...+
T Consensus 503 ---------------------------------------GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~ 543 (775)
T KOG0319|consen 503 ---------------------------------------GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTF 543 (775)
T ss_pred ---------------------------------------CCccceEEEEeccccceeEeccCCceEEEEEeccceeeeee
Confidence 456699999999987 6669999999999999988887766
Q ss_pred eCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1389 CGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1389 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
.| |..+|.-+. |-.+|..|+||+.||.|
T Consensus 544 eG---------------------------------------------------H~~aVlra~-F~~~~~qliS~~adGli 571 (775)
T KOG0319|consen 544 EG---------------------------------------------------HTSAVLRAS-FIRNGKQLISAGADGLI 571 (775)
T ss_pred cC---------------------------------------------------ccceeEeee-eeeCCcEEEeccCCCcE
Confidence 65 889999885 87889999999999999
Q ss_pred EEcC
Q 000470 1469 KVWK 1472 (1472)
Q Consensus 1469 kVWk 1472 (1472)
|||+
T Consensus 572 KlWn 575 (775)
T KOG0319|consen 572 KLWN 575 (775)
T ss_pred EEEe
Confidence 9995
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=252.71 Aligned_cols=195 Identities=18% Similarity=0.159 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+++..|++|||++ ++|.+++..... +++.++..++.|++.||.+||+.|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~ 137 (258)
T smart00219 58 LDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG 137 (258)
T ss_pred cCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc
Confidence 479999999999999999999999998 599999976443 89999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++....... + ......++..|+|||.+. ...++.++||||+||++|+|++ |
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~----~--~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~i~~~l~~~g 201 (258)
T smart00219 138 ENLVVKISDFGLSRDLYDDDY----Y--KKKGGKLPIRWMAPESLK----------DGKFTSKSDVWSFGVLLWEIFTLG 201 (258)
T ss_pred cCCeEEEcccCCceecccccc----c--ccccCCCcccccChHHhc----------cCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999999876532211 0 001122567899999763 3457889999999999999998 6
Q ss_pred CCCCCchHHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.......+. ..........+...+..+.+++.+||..||++|||+.|+++.
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 202 ESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 8888654333221 111111222344467889999999999999999999999975
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=254.48 Aligned_cols=194 Identities=23% Similarity=0.201 Sum_probs=159.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.....+++..+..++.|++.||+|||+ .|++||||+|+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~ 135 (264)
T cd06623 56 CESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS 135 (264)
T ss_pred cCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC
Confidence 579999999999999999999999999 6999999887789999999999999999999999 99999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. ...++.++|+|||||++|+|++|.+
T Consensus 136 ~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~tg~~ 198 (264)
T cd06623 136 KGEVKIADFGISKVLENTLDQ-------CNTFVGTVTYMSPERIQ----------GESYSYAADIWSLGLTLLECALGKF 198 (264)
T ss_pred CCCEEEccCccceecccCCCc-------ccceeecccccCHhhhC----------CCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999988765322111 12334678899999764 2367889999999999999999998
Q ss_pred CCCchH---HHHHH-hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSH---LLAYR-RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~---~~~~~-~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||.... ..... .........++.. .+..+.++|.+||..+|++||++.|+++|
T Consensus 199 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 199 PFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 886542 22211 1112222233444 67789999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-25 Score=259.07 Aligned_cols=198 Identities=13% Similarity=0.085 Sum_probs=152.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++..+...|++|||+. ++|.+++.... .+++.++..++.|++.||+|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 589999999999999999999999998 69999987632 366788999999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+|||++.++.++|+|||+++....... ........++..|+|||... ...++.++|||||||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~DiwSlG~ 220 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESIL----------LGKFTTASDVWAFGV 220 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHh----------cCCccchhhhhHHHH
Confidence 999999999999999999999875422110 01112223356799999654 346788999999999
Q ss_pred HHHHHHh--CCCCCCchHHHHHHh--------cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 149 VIAELFL--EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 149 il~eLlt--g~~pf~~~~~~~~~~--------~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++|||++ |..||......+... .........+...++.+++|+.+||+.||++||++.|+++.++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9999998 567775332222111 1111111223345678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-24 Score=220.62 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=202.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
....|..|+++|..+.|+-||+|.+||+.|.+||+|+..++. ...+|.+|+..|.+++.+.+...|++|+.|..
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~------liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA------LIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc------eeeeecCCCceeeeccccccccccccCCCCce
Confidence 356788999999999999999999999999999999998876 56799999999999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC--ccceeecCC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKAIP 1207 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~--~~~~l~~~~ 1207 (1472)
|.+||+.+ |+ ..|++ ..|...|+.+.|+.+ ..++++|+-|.++++||.|+.. +++.+..
T Consensus 83 v~vwDV~T-----Gk--------v~Rr~-rgH~aqVNtV~fNee---sSVv~SgsfD~s~r~wDCRS~s~ePiQilde-- 143 (307)
T KOG0316|consen 83 VQVWDVNT-----GK--------VDRRF-RGHLAQVNTVRFNEE---SSVVASGSFDSSVRLWDCRSRSFEPIQILDE-- 143 (307)
T ss_pred EEEEEccc-----Ce--------eeeec-ccccceeeEEEecCc---ceEEEeccccceeEEEEcccCCCCccchhhh--
Confidence 99999985 21 12332 356778899999987 4599999999999999999864 5566654
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
..+.|.++.+. ++-+++|+.||+++.||+|.+.....+- ..||+++++ +++++ ..++++-++.++
T Consensus 144 a~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~---g~pit~vs~-s~d~n---------c~La~~l~stlr 208 (307)
T KOG0316|consen 144 AKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF---GHPITSVSF-SKDGN---------CSLASSLDSTLR 208 (307)
T ss_pred hcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc---CCcceeEEe-cCCCC---------EEEEeeccceee
Confidence 56778888876 6789999999999999999988765432 348999999 77665 788899999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLT 1367 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llT 1367 (1472)
+.|-++|+..+.+..+... .| .+.|..-..+..+++
T Consensus 209 LlDk~tGklL~sYkGhkn~-------------------------------ey-------------kldc~l~qsdthV~s 244 (307)
T KOG0316|consen 209 LLDKETGKLLKSYKGHKNM-------------------------------EY-------------KLDCCLNQSDTHVFS 244 (307)
T ss_pred ecccchhHHHHHhcccccc-------------------------------ee-------------eeeeeecccceeEEe
Confidence 9999999988777643220 01 123332223447889
Q ss_pred ccCCCeEEEEeCCCCCC
Q 000470 1368 GGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~ 1384 (1472)
|++||.|.+||+.+...
T Consensus 245 gSEDG~Vy~wdLvd~~~ 261 (307)
T KOG0316|consen 245 GSEDGKVYFWDLVDETQ 261 (307)
T ss_pred ccCCceEEEEEecccee
Confidence 99999999999976543
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=268.00 Aligned_cols=197 Identities=21% Similarity=0.306 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+++||+.++|.+++..+ .+++..++.++.|++.||+|||++||+||||||+||+
T Consensus 60 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nil 138 (336)
T cd07849 60 FKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLL 138 (336)
T ss_pred CCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 5799999999887654 358999999999999988664 5899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..+.++|+|||+++.......... ......++..|+|||.+.. ...++.++||||+||++|+|++
T Consensus 139 l~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGvil~el~~ 205 (336)
T cd07849 139 LNTNCDLKICDFGLARIADPEHDHTG----FLTEYVATRWYRAPEIMLN---------SKGYTKAIDIWSVGCILAEMLS 205 (336)
T ss_pred ECCCCCEEECcccceeeccccccccC----CcCCcCcCCCccChHHhhC---------CCCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999876533221111 2233457888999997642 2356889999999999999999
Q ss_pred CCCCCCchHHHH----HHh------------------------cCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLA----YRR------------------------GQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~----~~~------------------------~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||....... +.. ....... ......++.+.++|.+||+.||++||+
T Consensus 206 G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 285 (336)
T cd07849 206 NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT 285 (336)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC
Confidence 999996432211 000 0000000 011223567999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
+.|+++|
T Consensus 286 ~~e~l~h 292 (336)
T cd07849 286 VEEALAH 292 (336)
T ss_pred HHHHhcC
Confidence 9999999
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-25 Score=259.78 Aligned_cols=193 Identities=21% Similarity=0.203 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||+.|+|.+.+.. ...+++.++..++.||+.||.|||+.||+||||+|+||+++.+
T Consensus 72 l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~ 151 (307)
T cd06607 72 LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEP 151 (307)
T ss_pred CCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCC
Confidence 579999999999999999999999999998888754 4568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++...... ....++..|+|||.+... ....++.++||||+||++|||++|.+|
T Consensus 152 ~~~kL~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~s~G~il~el~tg~~p 213 (307)
T cd06607 152 GTVKLADFGSASLVSPA-----------NSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 213 (307)
T ss_pred CCEEEeecCcceecCCC-----------CCccCCccccCceeeecc-------CCCCCCcccchHHHHHHHHHHHcCCCC
Confidence 99999999987643211 123457789999987421 134578899999999999999999888
Q ss_pred CCchHHHH-HHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA-YRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~-~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... ... .............+..++++|.+||..||++||++.+++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 214 LFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 86443222 111 11111111122346789999999999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-25 Score=253.95 Aligned_cols=200 Identities=15% Similarity=0.063 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++.+++......|+||||++ ++|.+++.. .+.+++.++..++.|++.||+|||+.|++||||||+||+++.
T Consensus 63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~ 142 (268)
T cd05063 63 FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS 142 (268)
T ss_pred CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC
Confidence 579999999999999999999999999 699999975 356899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||++........ .. ........+..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~--~~--~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~il~ell~~g~ 208 (268)
T cd05063 143 NLECKVSDFGLSRVLEDDPE--GT--YTTSGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSFGE 208 (268)
T ss_pred CCcEEECCCccceecccccc--cc--eeccCCCcCceecCHHHhh----------cCCcChHhHHHHHHHHHHHHHhCCC
Confidence 99999999998865432111 11 1111112245699999764 2356889999999999999997 88
Q ss_pred CCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||............ ...........+..+.+++.+||+.+|++||++.++++.+..
T Consensus 209 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 209 RPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 888533222221111 111111223346789999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-23 Score=236.07 Aligned_cols=365 Identities=14% Similarity=0.138 Sum_probs=248.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
.-.++.+|..-|+++.|+|||.+|||+|.||+|.++|-.++|+...+.. -.+|.+.|.+++|+|++..|++++.|.+
T Consensus 182 Fk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfalsWsPDs~~~~T~SaDkt 258 (603)
T KOG0318|consen 182 FKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFALSWSPDSTQFLTVSADKT 258 (603)
T ss_pred eeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEEEECCCCceEEEecCCce
Confidence 4567889999999999999999999999999999999999986544332 3478889999999999999999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCC---CCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTK---EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
++|||+.+. +.++.+... +...+-|+ |-.+ .|++.+.+|.|..++...+.....+.+
T Consensus 259 ~KIWdVs~~-------------slv~t~~~~~~v~dqqvG~l-Wqkd-----~lItVSl~G~in~ln~~d~~~~~~i~G- 318 (603)
T KOG0318|consen 259 IKIWDVSTN-------------SLVSTWPMGSTVEDQQVGCL-WQKD-----HLITVSLSGTINYLNPSDPSVLKVISG- 318 (603)
T ss_pred EEEEEeecc-------------ceEEEeecCCchhceEEEEE-EeCC-----eEEEEEcCcEEEEecccCCChhheecc-
Confidence 999999841 122222221 22344455 4443 899999999999999999998888877
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
|...|++++.+|++.+|++|+.||.|.-||...+..-+.....|...|.++.. +..+ .+++.+.|+.+
T Consensus 319 -HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~-~~~~----------~~~t~g~Dd~l 386 (603)
T KOG0318|consen 319 -HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA-SESG----------ELFTIGWDDTL 386 (603)
T ss_pred -cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee-cCCC----------cEEEEecCCeE
Confidence 99999999999999999999999999999999888776665667778888876 3222 47889999999
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccc--ccccccc-cccCCC--CCCcCCceEeccCC
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRN--VNQKYRV-DELNEP--PPRLLGIRSLLPLP 1361 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~-~~l~~~--~~~~~~V~sl~~~p 1361 (1472)
++.++....+-..... .... ||........+...- ...+..+ ...... ........+++++|
T Consensus 387 ~~~~~~~~~~t~~~~~-~lg~------------QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~ 453 (603)
T KOG0318|consen 387 RVISLKDNGYTKSEVV-KLGS------------QPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP 453 (603)
T ss_pred EEEecccCccccccee-ecCC------------CceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC
Confidence 9998865433221110 0000 111100000000000 0000000 000000 01122467888999
Q ss_pred CC-cEEEccCCCeEEEEeCCCCCCceE-EeCCCCCCCCCCcceEEeecCceEEEEeeecCCcc--hhhhhHHHHhhhhcC
Q 000470 1362 GG-DLLTGGTDLKIRRWDHCSPGRSYC-ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLT--SKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1362 ~g-~llTgg~Dg~IrlWDl~~~~~s~v-v~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~ 1437 (1472)
++ .++.||.|++|+++.+...+.... ..- .+....++...+.++..+......+-.. ...++. ....
T Consensus 454 ~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~----~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~-----~~~~ 524 (603)
T KOG0318|consen 454 DGSEVAVGGQDGKVHVYSLSGDELKEEAKLL----EHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASRE-----VKTN 524 (603)
T ss_pred CCCEEEEecccceEEEEEecCCcccceeeee----cccCCceEEEECCCCcEEEEeccCCcEEEEEcccCc-----eecc
Confidence 98 677999999999999987553211 111 1223556666666665554332111000 000000 0122
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
....|+..|++|| |+|+..+++|||-|-.|.||.
T Consensus 525 ~w~FHtakI~~~a-WsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 525 RWAFHTAKINCVA-WSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred eeeeeeeeEEEEE-eCCCceEEEeccccceEEEEE
Confidence 3345999999997 999999999999999999994
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=258.24 Aligned_cols=198 Identities=17% Similarity=0.096 Sum_probs=152.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----------------------CCCCHHHHHHHHHHHHHHHH
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------------PFLSLVEKKWLAFQLLLAVK 57 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----------------------~~l~~~~~~~i~~Qll~aL~ 57 (1472)
++||||+++++++..+...|++|||++ |+|.+++... ..+++.++..++.||+.||.
T Consensus 65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~ 144 (288)
T cd05050 65 FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMA 144 (288)
T ss_pred cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999 6999999642 23778889999999999999
Q ss_pred HHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 58 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 58 ~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
|||++|++||||||+||+++.++.++|+|||.+.......... .......+..|+|||.+. ...+
T Consensus 145 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~ 209 (288)
T cd05050 145 YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-----ASENDAIPIRWMPPESIF----------YNRY 209 (288)
T ss_pred HHHhCCeecccccHhheEecCCCceEECccccceecccCcccc-----ccCCCccChhhcCHHHHh----------cCCC
Confidence 9999999999999999999999999999999887543221100 011222345699999764 3467
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 138 KPSMDIFAVGCVIAELFL-EVPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
+.++|||||||++|||++ |..||....... ............+...+..+.+||.+||+.||++||++.|+++.++
T Consensus 210 ~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 210 TTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 889999999999999997 766664322112 1111111111223445678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=264.02 Aligned_cols=198 Identities=23% Similarity=0.280 Sum_probs=152.6
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++... ...|+||||++++|.+.+.. ...+++.+++.++.||+.||.|||++||+||||||+|
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~N 138 (316)
T cd07842 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPAN 138 (316)
T ss_pred cCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHH
Confidence 5899999999999988 88999999999988887743 2368999999999999999999999999999999999
Q ss_pred EEEcc----CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 74 VLVTS----WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 74 ILv~~----~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
|+++. .+.+||+|||+++........ ........++..|+|||.+.. ...++.++|||||||+
T Consensus 139 il~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~ 205 (316)
T cd07842 139 ILVMGEGPERGVVKIGDLGLARLFNAPLKP----LADLDPVVVTIWYRAPELLLG---------ARHYTKAIDIWAIGCI 205 (316)
T ss_pred EEEcCCCCccceEEECCCccccccCCCccc----ccccCCccccccccCHHHHhC---------CCCCCcHHHHHHHHHH
Confidence 99999 899999999988765332211 111123456788999997642 2356889999999999
Q ss_pred HHHHHhCCCCCCchHHHH-------------H---------------------Hh---cCCCCC---cc----cC--CCC
Q 000470 150 IAELFLEVPFFELSHLLA-------------Y---------------------RR---GQYDPS---QH----LE--KIP 183 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~-------------~---------------------~~---~~~~~~---~~----l~--~~~ 183 (1472)
+|+|++|.+||....... . .. ...... .. .. ...
T Consensus 206 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd07842 206 FAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKP 285 (316)
T ss_pred HHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCC
Confidence 999999999986322110 0 00 000000 00 00 134
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 184 DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 184 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+..+.++|.+||+.||++|||+.|+++|
T Consensus 286 ~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 286 DSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 5679999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=257.13 Aligned_cols=198 Identities=16% Similarity=0.175 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++... ...|+||||++ ++|.+++... ..+++.++..++.||+.||+|||++||+||||||+||++
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~ 142 (284)
T cd05079 63 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 142 (284)
T ss_pred CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE
Confidence 5799999999998875 57899999998 6999999664 358999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.++....... .........++..|+|||.+. +..++.++|||||||++|||+++
T Consensus 143 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~ellt~ 208 (284)
T cd05079 143 ESEHQVKIGDFGLTKAIETDKE----YYTVKDDLDSPVFWYAPECLI----------QSKFYIASDVWSFGVTLYELLTY 208 (284)
T ss_pred cCCCCEEECCCccccccccCcc----ceeecCCCCCCccccCHHHhc----------cCCCCccccchhhhhhhhhhhcC
Confidence 9999999999999876532211 111223455677899999764 33578899999999999999998
Q ss_pred CCCCCchH--H----------------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSH--L----------------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~--~----------------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..++.... . ....... .....+...+..+.+|+.+||+.||++||++++++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 209 CDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG--KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred CCCCccccchhhhhcccccccccHHHHHHHHHcC--ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 55442110 0 0000100 1111233456789999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=258.38 Aligned_cols=196 Identities=20% Similarity=0.223 Sum_probs=158.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||++++.+++.+...|+||||++ ++|.+++..+..+++.++..++.||+.||.|||++|++||||||+|||++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 63 QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG 142 (290)
T ss_pred cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence 58999999999999999999999999 69999998877899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........ ......++..|+|||.+... ...++.++||||+||++|+|++|.+||
T Consensus 143 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~~l~~ll~g~~p~ 208 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEVE------RAYSFCGTIEYMAPDIVRGG--------DGGHDKAVDWWSMGVLMYELLTGASPF 208 (290)
T ss_pred CEEEeeCccceeccccccc------ccccccCCcccCChhhccCC--------CCCCCccccHHHHHHHHHHHhcCCCCC
Confidence 9999999988754211110 11234467889999987521 234678899999999999999999888
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 211 (1472)
... ....+...........+...++.+.+++.+||+.||++|| +++++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 209 TVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 532 2223322222222234555678899999999999999997 88999988
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=265.94 Aligned_cols=202 Identities=17% Similarity=0.209 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
++||||+++++++..+...|+||||+.|+|.+++..+..+++..+..++.||+.||+|||++||+||||||+||+++..+
T Consensus 77 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~ 156 (335)
T PTZ00024 77 IKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG 156 (335)
T ss_pred CCCcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC
Confidence 57999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCC-------CCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 81 WLYLSDFASFKPTYIPYDDPS-------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~-------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
.++|+|||.++....+..... ..........++..|+|||.+.+ ...++.++||||+||++|||
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---------AEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc---------CCCCCcHHHHHHHHHHHHHH
Confidence 999999998875531110000 00111122345778999997742 22468899999999999999
Q ss_pred HhCCCCCCchHHHH----HHh--c-CCCC------------------Cc---ccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 154 FLEVPFFELSHLLA----YRR--G-QYDP------------------SQ---HLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 154 ltg~~pf~~~~~~~----~~~--~-~~~~------------------~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
++|.+||....... ... + .... .. ......+..+.++|.+||+.||++||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 99999996433111 110 0 0000 00 0112335779999999999999999999
Q ss_pred HHHHHH
Q 000470 206 ESYLQN 211 (1472)
Q Consensus 206 ~elL~~ 211 (1472)
+|++.|
T Consensus 308 ~~~l~~ 313 (335)
T PTZ00024 308 KEALKH 313 (335)
T ss_pred HHHhcC
Confidence 999998
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-25 Score=256.24 Aligned_cols=197 Identities=18% Similarity=0.152 Sum_probs=155.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP---------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~---------~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
++||||+++++++..+...|+||||++ |+|.+++.... .+++.++..++.||+.||+|||++||+|||||
T Consensus 65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlk 144 (275)
T cd05046 65 LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLA 144 (275)
T ss_pred cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCc
Confidence 579999999999999999999999999 79999997654 68999999999999999999999999999999
Q ss_pred CCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 71 peNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+||+++.++.++|+|||.++...... ........++..|+|||.+. +...+.++|||||||++
T Consensus 145 p~Nili~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l 208 (275)
T cd05046 145 ARNCLVSSQREVKVSLLSLSKDVYNSE------YYKLRNALIPLRWLAPEAVQ----------EDDFSTKSDVWSFGVLM 208 (275)
T ss_pred cceEEEeCCCcEEEcccccccccCccc------ccccCCceeEEeecChhhhc----------cCCCCchhhHHHHHHHH
Confidence 999999999999999999876442111 11122333466799999764 23467889999999999
Q ss_pred HHHHh-CCCCCCchHHHHHHhcCC--CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 151 AELFL-EVPFFELSHLLAYRRGQY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|+|++ |.+||.......+..... ......+...+..+.+++.+||+.||++||++.|+++.+.
T Consensus 209 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 209 WEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 99998 677885322222111111 1111223445678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-25 Score=255.11 Aligned_cols=198 Identities=14% Similarity=0.121 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++.. ...|+||||++ |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 66 l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~ 144 (279)
T cd05057 66 VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT 144 (279)
T ss_pred CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC
Confidence 579999999999987 78899999998 7999999763 46899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.++....... ........++..|+|||.+. ...++.++|+||+||++||+++ |.
T Consensus 145 ~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~~~g~ 209 (279)
T cd05057 145 PQHVKITDFGLAKLLDVDEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHKSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred CCeEEECCCcccccccCccc-----ceecCCCcccccccCHHHhh----------cCCcCchhhHHHHHHHHHHHhcCCC
Confidence 99999999999876532111 11112223356799999764 3357889999999999999998 89
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
+||.......+...... .....+...+..+.+++.+||..||.+||++.++++.+..
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~ 267 (279)
T cd05057 210 KPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSK 267 (279)
T ss_pred CCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 99975443332221111 1122344566789999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-25 Score=253.80 Aligned_cols=193 Identities=18% Similarity=0.185 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++++ ...|+||||++ |+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.
T Consensus 64 ~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~ 142 (270)
T cd05056 64 FDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS 142 (270)
T ss_pred CCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec
Confidence 579999999999876 45789999998 6999999764 35899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeec-cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
++.++|+|||.++..... ..+.. ...++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 143 ~~~~~l~d~g~~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 143 PDCVKLGDFGLSRYLEDE-------SYYKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred CCCeEEccCceeeecccc-------cceecCCCCccccccChhhhc----------cCCCCchhhhHHHHHHHHHHHHcC
Confidence 999999999988755221 11111 222345799999764 3357889999999999999986 8
Q ss_pred CCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+||....... +..+.. ...+...+..++++|.+|+..+|++||++.++++.+..
T Consensus 206 ~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 206 VKPFQGVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred CCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 88886443222 222221 12344556789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-25 Score=253.23 Aligned_cols=196 Identities=15% Similarity=0.086 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+||||++ ++|.+++.... .+++.++..++.|++.||.|||++||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~ 137 (261)
T cd05034 58 LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG 137 (261)
T ss_pred CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc
Confidence 579999999999999899999999998 69999997643 589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++........ .......+..|+|||.+. +..++.++||||+||++|+|++ |
T Consensus 138 ~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 138 ENLVCKIADFGLARLIEDDEYT------AREGAKFPIKWTAPEAAN----------YGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCCCEEECccccceeccchhhh------hhhccCCCccccCHHHhc----------cCCcCchhHHHHHHHHHHHHHhCC
Confidence 9999999999988755321100 001122346799999764 3457889999999999999998 8
Q ss_pred CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
++||........ ...........+...+..+++++.+||..+|++||+++++++-+
T Consensus 202 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 202 RVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 999965432221 11111111222334467899999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=266.56 Aligned_cols=195 Identities=22% Similarity=0.319 Sum_probs=154.9
Q ss_pred CCCCCcceeeEEEEeC-----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETD-----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++... ...|+++||+.++|.+++...+.+++.+++.++.|++.||.|||++|++||||||+||+
T Consensus 61 l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil 140 (337)
T cd07858 61 LDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL 140 (337)
T ss_pred cCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 5799999999988654 35899999999999999988888999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||+++...... .......++..|+|||.+.. ...++.++|||||||++|+|++
T Consensus 141 ~~~~~~~kL~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~ 204 (337)
T cd07858 141 LNANCDLKICDFGLARTTSEKG-------DFMTEYVVTRWYRAPELLLN---------CSEYTTAIDVWSVGCIFAELLG 204 (337)
T ss_pred EcCCCCEEECcCccccccCCCc-------ccccccccccCccChHHHhc---------CCCCCCcccHHHHHHHHHHHHc
Confidence 9999999999999987653221 11223446788999998752 1247789999999999999999
Q ss_pred CCCCCCchHHHH---------------------------HHhcC-CCCC---cccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLA---------------------------YRRGQ-YDPS---QHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~---------------------------~~~~~-~~~~---~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|++||...+... +.+.. .... .......++.+++||.+||+.||++||+
T Consensus 205 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps 284 (337)
T cd07858 205 RKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT 284 (337)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC
Confidence 999996432110 00000 0000 1112235678999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++|+++|
T Consensus 285 ~~ell~h 291 (337)
T cd07858 285 VEEALAH 291 (337)
T ss_pred HHHHHcC
Confidence 9999999
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-25 Score=281.61 Aligned_cols=203 Identities=16% Similarity=0.188 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~D 68 (1472)
++||||+++++++.+++..|++|||++ |+|.+++... ..++...+..++.||+.||+|||++||+|||
T Consensus 59 L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRD 138 (932)
T PRK13184 59 LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRD 138 (932)
T ss_pred CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 579999999999999999999999999 5999988631 2245677889999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCC-----------ceeeccCCCCccccCcccccccCCccccccCCCC
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF-----------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~-----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
|||+|||++.+|.++|+|||+++......+..... ........||+.|+|||++. +..+
T Consensus 139 LKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~----------g~~~ 208 (932)
T PRK13184 139 LKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL----------GVPA 208 (932)
T ss_pred CchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc----------CCCC
Confidence 99999999999999999999987652221111100 00112345899999999764 3467
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCchHHHHHHh--cCCCCCcc-cCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHHhh
Q 000470 138 KPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--GQYDPSQH-LEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQNYA 213 (1472)
Q Consensus 138 t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--~~~~~~~~-l~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~~~ 213 (1472)
+.++||||+||++|||++|.+||.......... ....+... .....++.+.+++.+||+.||++|++. +++++.+.
T Consensus 209 S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 209 SESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred CcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 889999999999999999999997544322211 11111111 112345789999999999999999854 55555443
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=259.22 Aligned_cols=199 Identities=20% Similarity=0.261 Sum_probs=159.8
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
||||++++++++.+...|+||||++ ++|.+++.+.+.+++.++..++.|++.||.+||+.|++|+||||+||+++.++.
T Consensus 61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~ 140 (280)
T cd05581 61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH 140 (280)
T ss_pred CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC
Confidence 9999999999999999999999996 799999998888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCC-------------CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 82 LYLSDFASFKPTYIPYDDPSD-------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~-------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
++|+|||.+............ .........++..|+|||.+. ...++.++|||||||
T Consensus 141 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~ 210 (280)
T cd05581 141 IKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN----------EKPAGKSSDLWALGC 210 (280)
T ss_pred EEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC----------CCCCChhhhHHHHHH
Confidence 999999988755332211000 001122334678899999764 234788999999999
Q ss_pred HHHHHHhCCCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 000470 149 VIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 211 (1472)
Q Consensus 149 il~eLltg~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 211 (1472)
+++++++|.+||..................++...++.+.++|.+||+.||++||++ +++++|
T Consensus 211 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 211 IIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 999999999999755432222111122223444557889999999999999999999 999988
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-25 Score=253.30 Aligned_cols=194 Identities=22% Similarity=0.264 Sum_probs=156.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++.+...|+|+||+. ++|.+++... ..+++.++..++.|++.||.|||++|++|+||+|+||+++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~ 135 (256)
T cd08218 56 MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT 135 (256)
T ss_pred CCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 579999999999999999999999998 5999998753 2478999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+........ ......+++.|+|||.+. +..++.++|+||+||++++|++|.
T Consensus 136 ~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 136 KDGTIKLGDFGIARVLNSTVE-------LARTCIGTPYYLSPEICE----------NRPYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred CCCCEEEeeccceeecCcchh-------hhhhccCCccccCHHHhC----------CCCCCCccchhHHHHHHHHHHcCC
Confidence 999999999998875422111 112234677899999764 335678999999999999999998
Q ss_pred CCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||.......... .........+...+..++++|.+||+.+|++||++.++++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 199 HAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 8886544332221 11111122344557789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-25 Score=251.93 Aligned_cols=192 Identities=15% Similarity=0.154 Sum_probs=152.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+ ..|++|||+. ++|.+++...+ .+++..+..++.|++.||.|||+.|++||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~ 134 (254)
T cd05083 56 LHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS 134 (254)
T ss_pred CCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc
Confidence 5799999999998765 4799999999 69999997643 488999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++...... .....+..|+|||.+. ...++.++|+|||||++|||++ |
T Consensus 135 ~~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 135 EDGVAKVSDFGLARVGSMGV----------DNSKLPVKWTAPEALK----------HKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred CCCcEEECCCccceeccccC----------CCCCCCceecCHHHhc----------cCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999887542111 1122345799999764 3357889999999999999997 8
Q ss_pred CCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||............. ......+...++.+++++.+||+.+|++||+++++++.++
T Consensus 195 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 195 RAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 99986554333221111 1112233445678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-25 Score=253.41 Aligned_cols=196 Identities=16% Similarity=0.130 Sum_probs=154.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++..++..|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+
T Consensus 59 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nil 138 (267)
T cd08229 59 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 579999999999999999999999999 599998863 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......++..|+|||.+. ...++.++|+||+||++|+|++
T Consensus 139 i~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~ 201 (267)
T cd08229 139 ITATGVVKLGDLGLGRFFSSKT-------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred EcCCCCEEECcchhhhccccCC-------cccccccCCcCccCHHHhc----------CCCccchhhHHHHHHHHHHHHh
Confidence 9999999999999876442111 0112345678899999764 3356789999999999999999
Q ss_pred CCCCCCchHH--HHHHhc-C-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHL--LAYRRG-Q-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~--~~~~~~-~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|..||..... ....+. . ...........++.++++|.+||..||++|||+.++++-++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 202 LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 9888853321 111111 1 11111122346678999999999999999999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=255.91 Aligned_cols=197 Identities=18% Similarity=0.120 Sum_probs=152.3
Q ss_pred CCCCcceeeEEEEeC-----CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQETD-----KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~-----~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
+||||+++++++... ...|+||||++ ++|.+++.. ...+++..++.++.|++.||+|||++||+||||||
T Consensus 77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp 156 (291)
T cd06639 77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKG 156 (291)
T ss_pred CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 799999999998754 36899999998 599998753 35689999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 151 (1472)
+||+++.++.++|+|||.++....... ......++..|+|||.+.... .....++.++||||+||++|
T Consensus 157 ~nili~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 157 NNILLTTEGGVKLVDFGVSAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQ-----QYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred HHEEEcCCCCEEEeecccchhcccccc-------cccCccCCccccChhhhcCCC-----CcccccCCccchHHHHHHHH
Confidence 999999999999999998775421111 112234678899999875321 11234688999999999999
Q ss_pred HHHhCCCCCCchH----HHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 152 ELFLEVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 152 eLltg~~pf~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||++|++||.... +..+.+.... ....+......+.+||.+||+.||++||++.|+++|
T Consensus 225 el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 225 ELGDGDPPLFDMHPVKTLFKIPRNPPP-TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHhhCCCCCCCCcHHHHHHHHhcCCCC-CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 9999988885432 2222222111 111122344679999999999999999999999998
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-25 Score=251.89 Aligned_cols=194 Identities=21% Similarity=0.250 Sum_probs=160.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.++.+...|+||||++ ++|.+++.....+++.++..++.|++.||.|||+.|++|+||||+||+++.+
T Consensus 50 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~ 129 (250)
T cd05123 50 INHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD 129 (250)
T ss_pred cCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC
Confidence 579999999999999999999999996 7999999887779999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......++..|+|||.+. +...+.++|+|||||++|+|++|..|
T Consensus 130 ~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p 192 (250)
T cd05123 130 GHIKLTDFGLAKELSSEGS-------RTNTFCGTPEYLAPEVLL----------GKGYGKAVDWWSLGVLLYEMLTGKPP 192 (250)
T ss_pred CcEEEeecCcceecccCCC-------cccCCcCCccccChHHhC----------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999998875532110 112344677899999764 23467889999999999999999988
Q ss_pred CCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
|..................++...+..+.++|.+||..||++||++ +++++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 193 FYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 8655433322222223334555667889999999999999999999 899887
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-25 Score=258.17 Aligned_cols=195 Identities=24% Similarity=0.349 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++++|.+++...+. +++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~ 137 (294)
T PLN00009 58 MQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR 137 (294)
T ss_pred ccCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC
Confidence 579999999999999999999999999999998866443 578888899999999999999999999999999999985
Q ss_pred -CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 79 -WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 79 -~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.+.+||+|||.+........ ......+++.|+|||.+.. ...++.++||||+||++|+|++|.
T Consensus 138 ~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~i~~~l~tg~ 201 (294)
T PLN00009 138 RTNALKLADFGLARAFGIPVR-------TFTHEVVTLWYRAPEILLG---------SRHYSTPVDIWSVGCIFAEMVNQK 201 (294)
T ss_pred CCCEEEEcccccccccCCCcc-------ccccCceeecccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 45799999998865422111 1123345788999997642 235788999999999999999999
Q ss_pred CCCCchHH-HHHHh---cCCCC---------------------C-c---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHL-LAYRR---GQYDP---------------------S-Q---HLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~-~~~~~---~~~~~---------------------~-~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||..... ..+.+ ....+ . . ......++.++++|.+||+.||++||+++++
T Consensus 202 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~ 281 (294)
T PLN00009 202 PLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA 281 (294)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence 99964321 11110 00000 0 0 0112345779999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 282 l~~ 284 (294)
T PLN00009 282 LEH 284 (294)
T ss_pred hcC
Confidence 998
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-25 Score=254.21 Aligned_cols=193 Identities=21% Similarity=0.182 Sum_probs=156.2
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
.||||+++++++..+...|+||||++ ++|.+++... .+++..+..++.|++.||.|||+.||+||||+|+||+++.++
T Consensus 60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~ 138 (277)
T cd06917 60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG 138 (277)
T ss_pred CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC
Confidence 59999999999999999999999998 5999998765 689999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.+......... .....|+..|+|||.+.. +..++.++|+||+||++|+|++|.+||
T Consensus 139 ~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~ll~g~~p~ 202 (277)
T cd06917 139 NVKLCDFGVAALLNQNSSK-------RSTFVGTPYWMAPEVITE---------GKYYDTKADIWSLGITIYEMATGNPPY 202 (277)
T ss_pred CEEEccCCceeecCCCccc-------cccccCCcceeCHHHhcc---------CCccccchhHHHHHHHHHHHHhCCCCC
Confidence 9999999988765322110 122346778999997642 235678999999999999999999999
Q ss_pred CchHHHHHHhcCC-CCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 161 ELSHLLAYRRGQY-DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
............. ...+.+.. ..+.++.+++.+||+.||++||++.|+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 203 SDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 7654433222111 11122222 256789999999999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=251.27 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=155.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||++++++++.....|++|||+. ++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++.
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 56 LSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE 135 (256)
T ss_pred CCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC
Confidence 579999999999999999999999999 6999998763 45899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.++|+|||.+....... .. ......++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 136 ~~~~~l~d~g~~~~~~~~~-----~~-~~~~~~~~~~~~aPe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~ 199 (256)
T cd05112 136 NQVVKVSDFGMTRFVLDDQ-----YT-SSTGTKFPVKWSSPEVFS----------FSKYSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCeEEECCCcceeecccCc-----cc-ccCCCccchhhcCHhHhc----------cCCcChHHHHHHHHHHHHHHHcCCC
Confidence 9999999999876542111 00 001122346799999764 2357789999999999999998 89
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+||.............. .....+...+..+.+|+.+||+.+|++||++.|+++++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 200 TPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 99975443322211111 11123445678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-25 Score=253.82 Aligned_cols=199 Identities=21% Similarity=0.171 Sum_probs=157.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++.+..++..|++|||++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~ 135 (267)
T cd06610 56 CNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL 135 (267)
T ss_pred cCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE
Confidence 579999999999999999999999999 5999999753 458999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
++++.++|+|||.+.....+..... .......++..|+|||.+.. ...++.++|+|||||++|+|++|
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~---------~~~~~~~~Dv~slG~i~~~l~~g 203 (267)
T cd06610 136 GEDGSVKIADFGVSASLADGGDRTR---KVRKTFVGTPCWMAPEVMEQ---------VHGYDFKADIWSFGITAIELATG 203 (267)
T ss_pred cCCCCEEEcccchHHHhccCccccc---cccccccCChhhcChHHHcc---------ccCcCcccchHhHhHHHHHHHhC
Confidence 9999999999998876543322210 11123346788999998752 12568899999999999999999
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccC-----CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLE-----KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~-----~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.||......+ +..........+. ...++.+++++.+||+.||++||+++++++|
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 98886443221 1111111111111 2345789999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=234.62 Aligned_cols=263 Identities=21% Similarity=0.286 Sum_probs=215.2
Q ss_pred CCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+ .+|+|..+|.||...|..++||+-+.|+.+|+.|+.||.||+...+ -...|++|-+.|.|++.+|.-+
T Consensus 175 ikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk------vIR~YhGHlS~V~~L~lhPTld 248 (460)
T KOG0285|consen 175 IKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK------VIRHYHGHLSGVYCLDLHPTLD 248 (460)
T ss_pred eEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh------hHHHhccccceeEEEeccccce
Confidence 35799 5799999999999999999999999999999999999999998755 4557889988999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.|++|+.|.+++|||+++.. . ......|...|..+.+.|. ...+++|+.|++|++||++.++.
T Consensus 249 vl~t~grDst~RvWDiRtr~-------------~-V~~l~GH~~~V~~V~~~~~---dpqvit~S~D~tvrlWDl~agkt 311 (460)
T KOG0285|consen 249 VLVTGGRDSTIRVWDIRTRA-------------S-VHVLSGHTNPVASVMCQPT---DPQVITGSHDSTVRLWDLRAGKT 311 (460)
T ss_pred eEEecCCcceEEEeeecccc-------------e-EEEecCCCCcceeEEeecC---CCceEEecCCceEEEeeeccCce
Confidence 99999999999999998521 1 1223346666777777776 45899999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
..++.+ |...+.+++.+|....+++++.| .++.|++..+..+..+. .+..-|+.+.. ..++ .+++
T Consensus 312 ~~tlt~--hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nls-gh~~iintl~~-nsD~----------v~~~ 376 (460)
T KOG0285|consen 312 MITLTH--HKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLS-GHNAIINTLSV-NSDG----------VLVS 376 (460)
T ss_pred eEeeec--ccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccc-cccceeeeeee-ccCc----------eEEE
Confidence 999987 88899999999999999998887 59999999988887744 36667777776 3322 5788
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
|+.+|.+..||.++|.+-|....... |.+ -....+|.+.+|
T Consensus 377 G~dng~~~fwdwksg~nyQ~~~t~vq---------------pGS------------------------l~sEagI~as~f 417 (460)
T KOG0285|consen 377 GGDNGSIMFWDWKSGHNYQRGQTIVQ---------------PGS------------------------LESEAGIFASCF 417 (460)
T ss_pred cCCceEEEEEecCcCccccccccccc---------------CCc------------------------cccccceeEEee
Confidence 88889999999999987666542221 111 112348999999
Q ss_pred CCCC-cEEEccCCCeEEEEeCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
...| +|+||+.|.+|++|.-+
T Consensus 418 Dktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 418 DKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred cccCceEEeccCCcceEEEecc
Confidence 8888 89999999999999754
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=253.52 Aligned_cols=194 Identities=23% Similarity=0.280 Sum_probs=156.8
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecC
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCH-----EKGICHGD 68 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH-----~~gIvH~D 68 (1472)
++||||+++++++.. +...|++|||++ ++|.+++.. ...+++.+++.++.||+.||.||| +.+|+|||
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~d 135 (265)
T cd08217 56 LKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRD 135 (265)
T ss_pred cCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecC
Confidence 579999999997754 457899999998 699999864 356899999999999999999999 89999999
Q ss_pred CCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHH
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 LKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+||+++.++.++|+|||.++...... .......++..|+|||.+. ...++.++|+||||+
T Consensus 136 l~p~nili~~~~~~kl~d~g~~~~~~~~~-------~~~~~~~~~~~~~~pE~~~----------~~~~~~~~Dv~slG~ 198 (265)
T cd08217 136 LKPANIFLDANNNVKLGDFGLAKILGHDS-------SFAKTYVGTPYYMSPEQLN----------HMSYDEKSDIWSLGC 198 (265)
T ss_pred CCHHHEEEecCCCEEEecccccccccCCc-------ccccccccCCCccChhhhc----------CCCCCchhHHHHHHH
Confidence 99999999999999999999987653211 1123345788899999874 234778999999999
Q ss_pred HHHHHHhCCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 149 VIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 149 il~eLltg~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++++|++|..||.......+..... .....++...+..+.+++.+||+.+|++||++.++++|
T Consensus 199 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 199 LIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 9999999999997654333222111 12223455567889999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.6e-25 Score=251.87 Aligned_cols=193 Identities=24% Similarity=0.293 Sum_probs=156.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.+..++..|+||||++ ++|.+++..+ ..+++.++..++.|++.||+|||++||+||||||+||+++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~ 135 (256)
T cd08220 56 LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD 135 (256)
T ss_pred CCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 579999999999999999999999998 5999999763 3489999999999999999999999999999999999998
Q ss_pred cCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
.++ .++|+|||.++....... .....++..|+|||.+. ...++.++|+||+||++|+|++|
T Consensus 136 ~~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 136 KHKMVVKIGDFGISKILSSKSK--------AYTVVGTPCYISPELCE----------GKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred CCCCEEEEccCCCceecCCCcc--------ccccccCCcccCchhcc----------CCCCCcccchHHHHHHHHHHHhC
Confidence 654 689999999876532211 11234677899999764 33567899999999999999999
Q ss_pred CCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
..||...+....... .......++...++.+++++.+||..||++||++.|+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 198 KRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 989976543332211 1112223444567789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=252.09 Aligned_cols=195 Identities=15% Similarity=0.088 Sum_probs=151.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. ...|++|||++ ++|.+++... ..+++.+++.++.|++.||.|||++||+||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~ 136 (260)
T cd05070 58 LRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG 136 (260)
T ss_pred cCCCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe
Confidence 589999999998854 56899999998 6999999753 3489999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.+........ . ......++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~-----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~~g 200 (260)
T cd05070 137 DGLVCKIADFGLARLIEDNEY-----T-ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred CCceEEeCCceeeeeccCccc-----c-cccCCCCCccccChHHHh----------cCCCcchhhhHHHHHHHHHHHhcC
Confidence 999999999999865421110 0 011222355699999764 3357889999999999999999 7
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||.......... .........+...+..+++|+.+||..||++|||+.++.+-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 257 (260)
T cd05070 201 RVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257 (260)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 88886543222111 111112223445677899999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=259.69 Aligned_cols=195 Identities=23% Similarity=0.298 Sum_probs=152.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++++++.++..|+|+||+++ .|.++......+++.+++.++.||+.||.|||+.||+||||||+||+++++
T Consensus 57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~ 136 (286)
T cd07846 57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS 136 (286)
T ss_pred cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC
Confidence 5799999999999999999999999995 677666665568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++........ . .....++.+|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 137 ~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~~g~~~ 200 (286)
T cd07846 137 GVVKLCDFGFARTLAAPGE---V----YTDYVATRWYRAPELLVG---------DTKYGRAVDIWAVGCLVTEMLTGEPL 200 (286)
T ss_pred CcEEEEeeeeeeeccCCcc---c----cCcccceeeccCcHHhcc---------ccccCchHhHHHHHHHHHHHHcCCCC
Confidence 9999999998875432211 1 122345788999998742 23467889999999999999999999
Q ss_pred CCchHHHH----HHhc--------------------CCCCC-------cccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLLA----YRRG--------------------QYDPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~~----~~~~--------------------~~~~~-------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|....... +... ...+. .......+..+.+|+.+||+.+|++||++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 280 (286)
T cd07846 201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL 280 (286)
T ss_pred CCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence 86433211 1100 00000 00112345679999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 281 l~~ 283 (286)
T cd07846 281 LHH 283 (286)
T ss_pred hcC
Confidence 988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=250.87 Aligned_cols=195 Identities=15% Similarity=0.090 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||++++++++. ...|+||||++ |+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~ 136 (262)
T cd05071 58 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 136 (262)
T ss_pred CCCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc
Confidence 579999999998754 45899999999 6999999753 3578999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
.++.++|+|||.++........ ......++..|+|||... ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~ellt~g 200 (262)
T cd05071 137 ENLVCKVADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKG 200 (262)
T ss_pred CCCcEEeccCCceeeccccccc------cccCCcccceecCHhHhc----------cCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999988755321110 112233466799999653 3467889999999999999999 6
Q ss_pred CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||........ ...............+..+.+++.+||+.||++||++.++++-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l 257 (262)
T cd05071 201 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 257 (262)
T ss_pred CCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 888864432221 11111111122334567899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=257.33 Aligned_cols=193 Identities=20% Similarity=0.215 Sum_probs=154.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||+++++++++++...|+||||+.|+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~ 157 (313)
T cd06633 78 LKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 157 (313)
T ss_pred CCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC
Confidence 579999999999999999999999999999998865 3458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+..... .....++..|+|||.+... ....++.++||||+||++|+|++|.+|
T Consensus 158 ~~~kL~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~slGvil~el~~g~~p 219 (313)
T cd06633 158 GQVKLADFGSASKSSP-----------ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 219 (313)
T ss_pred CCEEEeecCCCcccCC-----------CCCccccccccChhhcccc-------CCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998753210 1233467889999987521 123578899999999999999999877
Q ss_pred CCchH-HHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+ ...... .............+..+++|+.+||+.+|.+||++.+++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 220 LFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 75432 222111 11111122233455679999999999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-25 Score=253.57 Aligned_cols=199 Identities=14% Similarity=0.125 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. .+.+++.+++.++.|++.||+|||++|++||||||+||+++.
T Consensus 62 l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~ 141 (269)
T cd05065 62 FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS 141 (269)
T ss_pred CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC
Confidence 579999999999999999999999999 599999875 456899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
++.++|+|||.++........+ . +..... .+..|+|||.+. ...++.++||||+||++|||++
T Consensus 142 ~~~~kl~dfg~~~~~~~~~~~~---~-~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~e~l~~ 207 (269)
T cd05065 142 NLVCKVSDFGLSRFLEDDTSDP---T-YTSSLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSY 207 (269)
T ss_pred CCcEEECCCccccccccCcccc---c-cccccCCCcceeecCHhHhc----------cCcccchhhhhhhHHHHHHHhcC
Confidence 9999999999876543221111 1 111111 134699999764 3457889999999999999886
Q ss_pred CCCCCCchHHHHHHhc-CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|.+||........... ........+...+..+.+++.+||+.+|++||++++++..+.
T Consensus 208 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 208 GERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 8888854332222211 111111122344678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=250.68 Aligned_cols=196 Identities=14% Similarity=0.071 Sum_probs=151.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.. ...|++|||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~ 136 (260)
T cd05069 58 LRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG 136 (260)
T ss_pred CCCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 579999999998854 56899999999 5999999753 3478999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.++........ ......++..|+|||... +..++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 137 DNLVCKIADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred CCCeEEECCCccceEccCCccc------ccCCCccchhhCCHHHhc----------cCCcChHHHHHHHHHHHHHHHhCC
Confidence 9999999999988654221110 011223456799999653 3457889999999999999999 7
Q ss_pred CCCCCchHHHH-HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+||....... +...........+...+..+++++.+||..||++||+++++++-++
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 201 RVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 88886432221 1111111112233445678999999999999999999999997643
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=255.55 Aligned_cols=193 Identities=20% Similarity=0.239 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||+. ++|.+++.. ..+++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 73 ~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~ 151 (285)
T cd06648 73 YQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD 151 (285)
T ss_pred cCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC
Confidence 479999999999999999999999998 599999887 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... .+ ......|+..|+|||.+. +..++.++||||+||++|||++|.+|
T Consensus 152 ~~~~l~d~g~~~~~~~~--~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGv~l~ell~g~~p 214 (285)
T cd06648 152 GRVKLSDFGFCAQVSKE--VP-----RRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMVDGEPP 214 (285)
T ss_pred CcEEEcccccchhhccC--Cc-----ccccccCCccccCHHHhc----------CCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 99999999987644211 11 012234678899999764 23577899999999999999999888
Q ss_pred CCchHHH-HHHhc--CCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLL-AYRRG--QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~-~~~~~--~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+.. .+... ...+....+...+..+.++|.+||..+|++||++.++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 215 YFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 7543322 22111 1111111122256789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-25 Score=258.90 Aligned_cols=191 Identities=19% Similarity=0.200 Sum_probs=154.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++++++++..+...|+||||+.|+|.+.+.. ...+++.++..++.|++.||.|||++||+||||||+||+++.+
T Consensus 82 l~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~ 161 (317)
T cd06635 82 IKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 161 (317)
T ss_pred CCCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC
Confidence 579999999999999999999999999999888754 4558999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||++..... .....++..|+|||.+... ....++.++||||+||++|||++|.+|
T Consensus 162 ~~~kl~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Dv~slGvil~el~~g~~p 223 (317)
T cd06635 162 GQVKLADFGSASIASP-----------ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 223 (317)
T ss_pred CCEEEecCCCccccCC-----------cccccCCccccChhhhhcC-------CCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999999998764311 1223467789999987421 123578899999999999999999877
Q ss_pred CCchH-HH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .. ........ .......++.++++|.+||+.+|.+||++.++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 224 LFNMNAMSALYHIAQNESP--TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CCCccHHHHHHHHHhccCC--CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 74332 22 12222211 11223456789999999999999999999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-26 Score=250.00 Aligned_cols=186 Identities=18% Similarity=0.179 Sum_probs=164.9
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
-|.+++++.+|++-..+|+||||+. |+|--.|+.-+.+.+..+.+++.+|+-||-+||++||+.||||.+|||++.+|+
T Consensus 409 ppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH 488 (683)
T KOG0696|consen 409 PPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH 488 (683)
T ss_pred CchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc
Confidence 3677889999999999999999999 699888988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 161 (1472)
+||+|||+++.-..+. ....|.|||+.|+|||++. ..+|+.++|.||+|++||||+.|+|||+
T Consensus 489 iKi~DFGmcKEni~~~-------~TTkTFCGTPdYiAPEIi~----------YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 489 IKIADFGMCKENIFDG-------VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred eEeeecccccccccCC-------cceeeecCCCcccccceEE----------ecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 9999999998543222 2346789999999999886 3488999999999999999999999999
Q ss_pred chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 162 LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+.+..++.+.........++..+.++.+++...|.+.|.+|..+
T Consensus 552 GeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 552 GEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred CCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCC
Confidence 88877776666665666788888999999999999999999854
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-25 Score=256.38 Aligned_cols=192 Identities=19% Similarity=0.158 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++......|+||||++ ++|.+++...+.+++..+..++.|++.||.|||+ .|++||||||+||+++.
T Consensus 60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~ 139 (284)
T cd06620 60 CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS 139 (284)
T ss_pred cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC
Confidence 579999999999999999999999999 6999999887789999999999999999999997 69999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||++....... .....++..|+|||.+. ...++.++||||+||++|+|++|.+
T Consensus 140 ~~~~~l~d~gl~~~~~~~~---------~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~tg~~ 200 (284)
T cd06620 140 RGQIKLCDFGVSGELINSI---------ADTFVGTSTYMSPERIQ----------GGKYTVKSDVWSLGISIIELALGKF 200 (284)
T ss_pred CCcEEEccCCcccchhhhc---------cCccccCcccCCHHHHc----------cCCCCccchHHHHHHHHHHHHhCCC
Confidence 9999999999876431111 12345788899999764 2366789999999999999999999
Q ss_pred CCCchHH-----------HHH-HhcCCCCCcccCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-----------LAY-RRGQYDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-----------~~~-~~~~~~~~~~l~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ... ..........++. ..+..+.+||.+||+.||++||+++|++++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 201 PFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 9864321 111 1111111112222 245689999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-25 Score=262.50 Aligned_cols=198 Identities=23% Similarity=0.353 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+||||+++++++... ...|+||||++++|.+++..+ .+++..++.++.||+.||.|||+.||+||||||+||+++.+
T Consensus 65 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~ 143 (337)
T cd07852 65 DHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD 143 (337)
T ss_pred CCCCccceeeeeccCCCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence 899999999998653 468999999999999999876 68999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++.......... ........++..|+|||.+.. ...++.++||||+||++|+|++|++|
T Consensus 144 ~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~~l~el~tg~~p 212 (337)
T cd07852 144 CRVKLADFGLARSLSELEENPE--NPVLTDYVATRWYRAPEILLG---------STRYTKGVDMWSVGCILGEMLLGKPL 212 (337)
T ss_pred CcEEEeeccchhcccccccccc--CcchhcccccccccCceeeec---------cccccccchHHHHHHHHHHHHhCCCC
Confidence 9999999998876533221100 011123346888999998742 23567899999999999999999999
Q ss_pred CCchHHH----HHHh---------------------------cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLL----AYRR---------------------------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~----~~~~---------------------------~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|...... .+.. .............+..+.++|.+||+.||++|||+.++
T Consensus 213 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~i 292 (337)
T cd07852 213 FPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEA 292 (337)
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHH
Confidence 8532211 0000 00011111122256789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 293 l~~ 295 (337)
T cd07852 293 LEH 295 (337)
T ss_pred hhC
Confidence 998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-25 Score=257.78 Aligned_cols=194 Identities=24% Similarity=0.346 Sum_probs=150.1
Q ss_pred CCCCcceeeEEEEeCCe-----EEEEecccCCcHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 2 SSTPCVHKKFWQETDKA-----AYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~-----~~lV~Ey~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
.||||+++++++..+.. .|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||
T Consensus 59 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~ 138 (295)
T cd07837 59 ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKP 138 (295)
T ss_pred CCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCh
Confidence 46999999999987665 8999999999999988542 3479999999999999999999999999999999
Q ss_pred CCEEEcc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 72 ENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 72 eNILv~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
+||+++. .+.++|+|||.++....+... .....+++.|+|||.+.. ...++.++||||+||++
T Consensus 139 ~nil~~~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l 202 (295)
T cd07837 139 QNLLVDKQKGLLKIADLGLGRAFSIPVKS-------YTHEIVTLWYRAPEVLLG---------STHYSTPVDIWSVGCIF 202 (295)
T ss_pred HHEEEecCCCeEEEeecccceecCCCccc-------cCCcccccCCCChHHhhC---------CCCCCchHHHHHHHHHH
Confidence 9999998 889999999988755322111 012235678999997742 23568899999999999
Q ss_pred HHHHhCCCCCCchH-HH---HHHhcCCCCC------------------------cccCCCCCHHHHHHHHHhcccCcCCC
Q 000470 151 AELFLEVPFFELSH-LL---AYRRGQYDPS------------------------QHLEKIPDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 151 ~eLltg~~pf~~~~-~~---~~~~~~~~~~------------------------~~l~~~~~~~l~~LI~~mL~~dP~~R 202 (1472)
|+|++|.+||.... .. .+......+. .......++.+.+||.+||+.||.+|
T Consensus 203 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 282 (295)
T cd07837 203 AEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKR 282 (295)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhc
Confidence 99999998885432 11 1111100000 00112346789999999999999999
Q ss_pred CCHHHHHHH
Q 000470 203 FSAESYLQN 211 (1472)
Q Consensus 203 psa~elL~~ 211 (1472)
|+++|++.|
T Consensus 283 ~~~~eil~~ 291 (295)
T cd07837 283 ISAKAALTH 291 (295)
T ss_pred CCHHHHhcC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=258.83 Aligned_cols=193 Identities=21% Similarity=0.225 Sum_probs=163.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||-||.+...||+.+.+++|||-+.|+..+.|- .+++|++...++++.||+.||+|||-+||+|+||||||||+.+
T Consensus 620 l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas 699 (888)
T KOG4236|consen 620 LHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLAS 699 (888)
T ss_pred cCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeecc
Confidence 47999999999999999999999999999888874 4678999999999999999999999999999999999999976
Q ss_pred CC---cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 79 WN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 79 ~~---~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
.. ++||||||.++.+.. ..+..+..||+.|+|||++. ...|+..-|+||.|+|+|--+.
T Consensus 700 ~~~FPQvKlCDFGfARiIgE--------ksFRrsVVGTPAYLaPEVLr----------nkGyNrSLDMWSVGVIiYVsLS 761 (888)
T KOG4236|consen 700 ASPFPQVKLCDFGFARIIGE--------KSFRRSVVGTPAYLAPEVLR----------NKGYNRSLDMWSVGVIIYVSLS 761 (888)
T ss_pred CCCCCceeeccccceeecch--------hhhhhhhcCCccccCHHHHh----------hccccccccceeeeEEEEEEec
Confidence 53 799999999997632 12346778999999999886 3467888999999999999999
Q ss_pred CCCCCCchH-H-HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH-L-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~-~-~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||+..+ + .++....+-..+..++..++.+.|||..+|+..=.+|+|.++.|.|
T Consensus 762 GTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 762 GTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 988886543 2 2344444444444444556789999999999999999999999998
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=254.95 Aligned_cols=200 Identities=16% Similarity=0.089 Sum_probs=151.3
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
+.|+||++++++..... ..|+++|++..++.+.+......++..++.++.|++.||+|||++||+||||||+|||+
T Consensus 80 ~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill 159 (294)
T PHA02882 80 IDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159 (294)
T ss_pred CCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 47999999998765543 45788999888888887765557888999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||+++....................||+.|+|||.+. +..++.++||||+||++|||++|
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~----------~~~~~~~~DiwSlG~~l~el~~g 229 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN----------GACVTRRGDLESLGYCMLKWAGI 229 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC----------CCCCCcHHHHHHHHHHHHHHHhC
Confidence 99999999999998765322111100001112345899999999764 44678999999999999999999
Q ss_pred CCCCCchH----HH-----HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSH----LL-----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~----~~-----~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||.... .. .+.......... ....++.+.+++..|+..+|++||+++++++-
T Consensus 230 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~ 292 (294)
T PHA02882 230 KLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIKI 292 (294)
T ss_pred CCCCCccccchHHHHHhHHHHHHHhhhhhhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHh
Confidence 99996431 11 111111111111 22345789999999999999999999999875
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-25 Score=258.03 Aligned_cols=196 Identities=15% Similarity=0.090 Sum_probs=154.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+ ..++++||++ |+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 66 l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~ 144 (303)
T cd05110 66 MDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 144 (303)
T ss_pred CCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC
Confidence 5899999999998764 4679999999 79999997654 5899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
++.+||+|||.++....... ........++..|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 145 ~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DiwslG~~l~el~t~g~ 209 (303)
T cd05110 145 PNHVKITDFGLARLLEGDEK-----EYNADGGKMPIKWMALECIH----------YRKFTHQSDVWSYGVTIWELMTFGG 209 (303)
T ss_pred CCceEEccccccccccCccc-----ccccCCCccccccCCHHHhc----------cCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999875532111 11112233466799999764 3467889999999999999997 78
Q ss_pred CCCCch---HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.||... ....+....... ..+...+..+++++.+||..+|++||+++++++.++.
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 210 KPYDGIPTREIPDLLEKGERL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred CCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 888543 233333222211 2234556789999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=257.31 Aligned_cols=195 Identities=27% Similarity=0.366 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++..+...|+||||++++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~ 134 (284)
T cd07836 55 LKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN 134 (284)
T ss_pred hcCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC
Confidence 5799999999999999999999999999999988653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+.....+.. ......++..|+|||.+.. ...++.++||||+||++|+|++|+
T Consensus 135 ~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 135 KRGELKLADFGLARAFGIPVN-------TFSNEVVTLWYRAPDVLLG---------SRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred CCCcEEEeecchhhhhcCCcc-------ccccccccccccChHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999998864422211 1122345778999998742 234678999999999999999999
Q ss_pred CCCCchHHHH----HHhcC--------------CCCCc-----------ccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 158 PFFELSHLLA----YRRGQ--------------YDPSQ-----------HLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~--------------~~~~~-----------~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
+||......+ ..... ..... .+....+..++++|.+||+.||.+||++.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 278 (284)
T cd07836 199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA 278 (284)
T ss_pred CCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH
Confidence 9986432111 10000 00000 0112235678999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
++|
T Consensus 279 l~~ 281 (284)
T cd07836 279 LQH 281 (284)
T ss_pred hcC
Confidence 988
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-24 Score=223.29 Aligned_cols=296 Identities=17% Similarity=0.256 Sum_probs=223.9
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEE
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~v 1132 (1472)
-|+||+.+++.|.++.+|.+|.||+.|.++.||-...+| ..-+|.+|.+.|+|+...-+++.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe------rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE------RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc------eeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 368999999999999999999999999999999988887 45688999999999999999999999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeC-----CCeEEEEeCCCC-------Ccc
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ-----NCGIHLWDTRSN-------SNT 1200 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~-----dg~I~iwDlrt~-------~~~ 1200 (1472)
||+.+.+ .....+.+.+|..+.|+.+ ++++++.+. .+.|.++|+|.. ++.
T Consensus 79 WDv~tGk---------------~la~~k~~~~Vk~~~F~~~---gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~ 140 (327)
T KOG0643|consen 79 WDVETGK---------------QLATWKTNSPVKRVDFSFG---GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY 140 (327)
T ss_pred EEcCCCc---------------EEEEeecCCeeEEEeeccC---CcEEEEEehhhcCcceEEEEEEccCChhhhcccCce
Confidence 9998521 1223345778899999998 667777665 357999999943 334
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
..+.. +...++++.|+|.+.+|++|..+|.|..||++++..+..-...|...|+.+++ +++.. +++++
T Consensus 141 ~kI~t--~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~-s~d~T---------~FiT~ 208 (327)
T KOG0643|consen 141 LKIPT--PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQF-SRDRT---------YFITG 208 (327)
T ss_pred EEecC--CccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccc-cCCcc---------eEEec
Confidence 44443 56889999999999999999999999999999986544433346678999998 77654 89999
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
+.|.+.++||+.+.++++++.... +|++.+++
T Consensus 209 s~Dttakl~D~~tl~v~Kty~te~------------------------------------------------PvN~aais 240 (327)
T KOG0643|consen 209 SKDTTAKLVDVRTLEVLKTYTTER------------------------------------------------PVNTAAIS 240 (327)
T ss_pred ccCccceeeeccceeeEEEeeecc------------------------------------------------cccceecc
Confidence 999999999999999999987322 46777777
Q ss_pred CCC-cEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCC
Q 000470 1361 PGG-DLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1438 (1472)
Q Consensus 1361 p~g-~ll-Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1438 (1472)
|.. .++ -||.+-+ |+.+ -.+ ..+.=..-|| ...-......
T Consensus 241 P~~d~VilgGGqeA~----dVTT------T~~--r~GKFEArFy--------------------------h~i~eEEigr 282 (327)
T KOG0643|consen 241 PLLDHVILGGGQEAM----DVTT------TST--RAGKFEARFY--------------------------HLIFEEEIGR 282 (327)
T ss_pred cccceEEecCCceee----eeee------ecc--cccchhhhHH--------------------------HHHHHHHhcc
Confidence 754 444 4443311 1000 000 0000000111 0011112335
Q ss_pred CCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1439 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1439 ~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
.++|-++|++|| |+|+|+..+||+.||.|+|.
T Consensus 283 vkGHFGPINsvA-fhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 283 VKGHFGPINSVA-FHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ccccccCcceeE-ECCCCcccccCCCCceEEEE
Confidence 678999999997 99999999999999999973
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=250.05 Aligned_cols=195 Identities=18% Similarity=0.173 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|+||+++++++..++..|+||||++ |+|.+++.. ...+++.+++.++.||+.||.|||+.||+||||||+||+
T Consensus 59 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil 138 (267)
T cd08224 59 LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVF 138 (267)
T ss_pred CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEE
Confidence 579999999999999999999999999 699998853 345899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.++........ .....++..|+|||.+. +..++.++|+||+||++|+|++
T Consensus 139 ~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~~l~~ 201 (267)
T cd08224 139 ITATGVVKLGDLGLGRFFSSKTTA-------AHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ECCCCcEEEeccceeeeccCCCcc-------cceecCCccccCHHHhc----------cCCCCchhcHHHHHHHHHHHHH
Confidence 999999999999987654221110 11234677899999764 3357889999999999999999
Q ss_pred CCCCCCchH--HHHH----HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSH--LLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~--~~~~----~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|..||.... .... ..+...+. .....+..++++|.+||..+|++||++.++++.++.
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 202 LQSPFYGDKMNLYSLCKKIEKCDYPPL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred CCCCcccCCccHHHHHhhhhcCCCCCC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 988885432 1111 12222111 122456789999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=255.44 Aligned_cols=193 Identities=24% Similarity=0.233 Sum_probs=151.8
Q ss_pred CCCCCcceeeEEEEeCCe-----EEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKA-----AYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~-----~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++..... .|++|||+.++|.+++...+ .+++.+++.++.|++.||.|||+.|++|+||||+|
T Consensus 58 ~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~n 137 (287)
T cd07838 58 FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQN 137 (287)
T ss_pred cCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh
Confidence 369999999999988776 99999999999999887643 48999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
|+++.++.++|+|||.+........ .....++..|+|||.+. +..++.++|+||+||++|||
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 138 ILVTSDGQVKIADFGLARIYSFEMA--------LTSVVVTLWYRAPEVLL----------QSSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred EEEccCCCEEEeccCcceeccCCcc--------cccccccccccChHHhc----------cCCCCCcchhhhHHHHHHHH
Confidence 9999999999999998876532211 12223577899999774 33567889999999999999
Q ss_pred HhCCCCCCchHHHH----HHhc-CC-----------------CC--C---cccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 154 FLEVPFFELSHLLA----YRRG-QY-----------------DP--S---QHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ltg~~pf~~~~~~~----~~~~-~~-----------------~~--~---~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
++|.+||......+ +... .. .. . .......++.+.++|.+||+.||++||+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~ 279 (287)
T cd07838 200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF 279 (287)
T ss_pred HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH
Confidence 99999996543221 1110 00 00 0 000011245788999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|++.|
T Consensus 280 ~il~~ 284 (287)
T cd07838 280 EALQH 284 (287)
T ss_pred HHhcC
Confidence 99988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=254.32 Aligned_cols=195 Identities=14% Similarity=0.036 Sum_probs=151.5
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHH---h--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRL---S--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l---~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
+||||+++++++..+...|++|||+.++|.++. . ....+++..+..++.|++.||+|||+ .||+||||||+||+
T Consensus 61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 61 DCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred CCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence 499999999999999999999999997665543 2 23568999999999999999999997 49999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..+.++|+|||+++....+.. .....++..|+|||.+.... ...++.++||||+||++|||++
T Consensus 141 ~~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~-------~~~~~~~~Di~slG~il~el~~ 205 (288)
T cd06616 141 LDRNGNIKLCDFGISGQLVDSIA--------KTRDAGCRPYMAPERIDPSA-------RDGYDVRSDVWSLGITLYEVAT 205 (288)
T ss_pred EccCCcEEEeecchhHHhccCCc--------cccccCccCccCHHHhcccc-------ccCCcchhhhhHHHHHHHHHHh
Confidence 99999999999999875432111 12234677899999875221 2367889999999999999999
Q ss_pred CCCCCCchH-H-HHHHhcCCCCCcc----cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSH-L-LAYRRGQYDPSQH----LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~-~-~~~~~~~~~~~~~----l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||.... . ....+......+. .+...+..+.+||.+||+.||++||+++++++|
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 206 GKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 999986432 1 2222211111111 112356789999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-25 Score=255.77 Aligned_cols=193 Identities=18% Similarity=0.234 Sum_probs=154.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++.+..+...|++|||++ ++|.+++... .+++..++.++.|++.||+|||++|++||||||+||+++.+
T Consensus 74 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~ 152 (292)
T cd06657 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD 152 (292)
T ss_pred cCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 579999999999999999999999999 5898887554 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ . .....++..|+|||.+. ...++.++|+||+||++|+|++|.+|
T Consensus 153 ~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slGvil~el~tg~~p 215 (292)
T cd06657 153 GRVKLSDFGFCAQVSKEVP---R----RKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPP 215 (292)
T ss_pred CCEEEcccccceecccccc---c----ccccccCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998765422111 0 12234678899999764 23567899999999999999999888
Q ss_pred CCchHHHH---HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|....... ................+..+.+++.+||+.||.+||++.++++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 216 YFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 86543222 11111221111223356789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=252.55 Aligned_cols=193 Identities=19% Similarity=0.154 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||++ ++|.+++... .+++.++..++.|++.|+.+||+.|++|+||||+||+++.+
T Consensus 59 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~ 137 (277)
T cd06641 59 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH 137 (277)
T ss_pred cCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC
Confidence 579999999999999999999999999 5999988754 58999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++...... .......++..|+|||.+. ....+.++|+||+||++|+|++|.+|
T Consensus 138 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p 200 (277)
T cd06641 138 GEVKLADFGVAGQLTDTQ-------IKRNTFVGTPFWMAPEVIK----------QSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEeecccceecccch-------hhhccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 999999999876542111 0112234677899999764 23567789999999999999999999
Q ss_pred CCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|............ ....+.+....+..+.++|.+||+.+|++||++.++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 201 HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 8644322221111 112223445567889999999999999999999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=255.81 Aligned_cols=196 Identities=23% Similarity=0.314 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSL-RDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL-~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..++..|++|||+++++ ..+......+++.++..++.||+.||.|||++|++||||||+||+++.+
T Consensus 57 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~ 136 (288)
T cd07833 57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES 136 (288)
T ss_pred cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 479999999999999999999999999654 4445555669999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... ......++..|+|||.+.. ...++.++||||+||++|+|++|.+|
T Consensus 137 ~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~ 201 (288)
T cd07833 137 GVLKLCDFGFARALRARPAS------PLTDYVATRWYRAPELLVG---------DTNYGKPVDVWAIGCIMAELLDGEPL 201 (288)
T ss_pred CCEEEEeeecccccCCCccc------cccCcccccCCcCCchhcC---------CCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999998765332210 1123346778999998752 12568899999999999999999999
Q ss_pred CCchHHHH----HHh----------------cCCCC----C--------cccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 160 FELSHLLA----YRR----------------GQYDP----S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 160 f~~~~~~~----~~~----------------~~~~~----~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
|....... ... ..+.. . ...+...+..+++||.+||..+|++||++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 281 (288)
T cd07833 202 FPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE 281 (288)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHH
Confidence 86432111 100 00000 0 0122234678999999999999999999999
Q ss_pred HHHH
Q 000470 208 YLQN 211 (1472)
Q Consensus 208 lL~~ 211 (1472)
+++|
T Consensus 282 il~~ 285 (288)
T cd07833 282 LLQH 285 (288)
T ss_pred HhcC
Confidence 9988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=264.43 Aligned_cols=198 Identities=21% Similarity=0.303 Sum_probs=157.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.... ..|++|||++++|.+++..+..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nil 135 (330)
T cd07834 56 LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNIL 135 (330)
T ss_pred cCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 57999999999998775 8999999999999999988778999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+........... ......++..|+|||.+... ..++.++|+||+||++|+|++
T Consensus 136 i~~~~~~~L~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~---------~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 136 VNSNCDLKICDFGLARGVDPDEDEKG----FLTEYVVTRWYRAPELLLSS---------SRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred EcCCCCEEEcccCceEeecccccccc----cccccccccCcCCceeeecc---------cCCCcchhHHHHHHHHHHHHc
Confidence 99999999999999876543321111 12233467889999987521 257889999999999999999
Q ss_pred CCCCCCchHHHHH----HhcCCCCC---------------------------cccCCCCCHHHHHHHHHhcccCcCCCCC
Q 000470 156 EVPFFELSHLLAY----RRGQYDPS---------------------------QHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~pf~~~~~~~~----~~~~~~~~---------------------------~~l~~~~~~~l~~LI~~mL~~dP~~Rps 204 (1472)
|.+||........ ......+. .......+..+.++|.+||+.||++||+
T Consensus 203 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 282 (330)
T cd07834 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT 282 (330)
T ss_pred CCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC
Confidence 9999964432211 11000000 0011224578999999999999999999
Q ss_pred HHHHHHH
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~elL~~ 211 (1472)
++++++|
T Consensus 283 ~~~ll~~ 289 (330)
T cd07834 283 ADEALAH 289 (330)
T ss_pred HHHHHhC
Confidence 9999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-25 Score=250.08 Aligned_cols=194 Identities=22% Similarity=0.246 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.++.+...|+|+||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|+||||+||+++
T Consensus 56 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~ 135 (257)
T cd08225 56 MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS 135 (257)
T ss_pred CCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc
Confidence 579999999999999999999999998 59999987643 479999999999999999999999999999999999999
Q ss_pred cCC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+++ .++|+|||.+........ ......|++.|+|||.+. ...++.++|+||+||+++||++|
T Consensus 136 ~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 136 KNGMVAKLGDFGIARQLNDSME-------LAYTCVGTPYYLSPEICQ----------NRPYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred CCCCeEEecccccchhccCCcc-------cccccCCCccccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhC
Confidence 886 469999998865422111 112334678899999764 33578899999999999999999
Q ss_pred CCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 VPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+||......+...... ..........+..++++|.+||..+|++||++.|+++|
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 199 KHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 99987554333222111 11222334456789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=247.13 Aligned_cols=196 Identities=19% Similarity=0.190 Sum_probs=160.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++.+... ...|+++||++ ++|.+++...+.+++.++..++.|++.||.|||+.|++||||+|+||+++
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~ 135 (260)
T cd06606 56 LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD 135 (260)
T ss_pred cCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc
Confidence 5799999999999988 89999999997 69999998877899999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.+......... .......++..|+|||.+. ....+.++|||||||++|+|++|.
T Consensus 136 ~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~ 200 (260)
T cd06606 136 SDGVVKLADFGCAKRLGDIETG-----EGTGSVRGTPYWMAPEVIR----------GEEYGRAADIWSLGCTVIEMATGK 200 (260)
T ss_pred CCCCEEEcccccEEeccccccc-----ccccCCCCCccccCHhhhc----------CCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999999999988765332210 1123345678899999764 234788999999999999999998
Q ss_pred CCCCchH--HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH--LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~--~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.||.... ........ ......++...+..++++|.+||+.||++||++.|+++|
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 201 PPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 8886543 11111111 122233455557899999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=255.71 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=153.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|||++++++++..+...|+||||+.|+|.+.+.. ...+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 72 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~ 151 (308)
T cd06634 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151 (308)
T ss_pred CCCCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC
Confidence 579999999999999999999999999999888754 4458999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... ....++..|+|||.+... ....++.++|||||||++|+|++|.+|
T Consensus 152 ~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Di~slG~il~el~~g~~p 213 (308)
T cd06634 152 GLVKLGDFGSASIMAPA-----------NXFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 213 (308)
T ss_pred CcEEECCcccceeecCc-----------ccccCCccccCHHHHhhc-------ccCCCCcccchHHHHHHHHHHHcCCCC
Confidence 99999999987644211 123457789999987421 123567899999999999999999877
Q ss_pred CCchH-HH---HHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH-LL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~-~~---~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... .. .+..... ........+..+++||.+||+.+|++||+++++++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 214 LFNMNAMSALYHIAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CccccHHHHHHHHhhcCC--CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 74322 11 1222211 111233456789999999999999999999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=246.67 Aligned_cols=194 Identities=23% Similarity=0.255 Sum_probs=158.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+.||||+++++++.++...|++|||++ ++|.+++.....+++..+..++.|++.||.+||+.||+||||||+||+++.+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 56 LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD 135 (254)
T ss_pred CCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC
Confidence 479999999999999999999999999 5999999887889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+......... .....++..|+|||.+. ...++.++||||+|+++|+|++|.+|
T Consensus 136 ~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~~lG~~l~~l~~g~~p 198 (254)
T cd06627 136 GVVKLADFGVATKLNDVSKD-------DASVVGTPYWMAPEVIE----------MSGASTASDIWSLGCTVIELLTGNPP 198 (254)
T ss_pred CCEEEeccccceecCCCccc-------ccccccchhhcCHhhhc----------CCCCCcchhHHHHHHHHHHHHhCCCC
Confidence 99999999988765322111 12234677899999764 22367899999999999999999888
Q ss_pred CCch-HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELS-HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|... ....+..........++...+..+++++.+||..+|++||++.+++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 199 YYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 8532 222222222222233455667889999999999999999999999987
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=246.70 Aligned_cols=192 Identities=22% Similarity=0.226 Sum_probs=155.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++++..+...|+++||++ ++|.+++... ..+++.++..++.|++.||.+||++|++||||+|+||+++.
T Consensus 54 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~ 133 (253)
T cd05122 54 CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS 133 (253)
T ss_pred CCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc
Confidence 579999999999999999999999999 6999999876 57999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+........ .....++..|+|||.+. ...++.++|+||+||++|+|++|.+
T Consensus 134 ~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~ 195 (253)
T cd05122 134 DGEVKLIDFGLSAQLSDTKA--------RNTMVGTPYWMAPEVIN----------GKPYDYKADIWSLGITAIELAEGKP 195 (253)
T ss_pred CCeEEEeecccccccccccc--------ccceecCCcccCHHHHc----------CCCCCccccHHHHHHHHHHHHhCCC
Confidence 99999999998765532211 12334677899999764 2346889999999999999999988
Q ss_pred CCCchHH-HHH-HhcCCCCCcccCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHL-LAY-RRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~-~~~-~~~~~~~~~~l~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||..... ... .... .....+.. ..+..+.++|.+||+.||++||++.|+++|
T Consensus 196 p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 196 PYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred CCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 8865421 111 1111 11111222 226789999999999999999999999988
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=252.67 Aligned_cols=193 Identities=18% Similarity=0.186 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
++||||+++++.+..+...|+++||++ ++|.+++...+ .+++.++..++.|++.||.|||+.||+|+||||+||+++.
T Consensus 72 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~ 151 (286)
T cd06614 72 CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK 151 (286)
T ss_pred CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC
Confidence 579999999999999999999999999 69999998876 7999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
++.++|+|||.+......... .....++..|+|||.+. +..++.++|+||+||++|+|++|.+
T Consensus 152 ~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slGvil~~l~~g~~ 214 (286)
T cd06614 152 DGSVKLADFGFAAQLTKEKSK-------RNSVVGTPYWMAPEVIK----------RKDYGPKVDIWSLGIMCIEMAEGEP 214 (286)
T ss_pred CCCEEECccchhhhhccchhh-------hccccCCcccCCHhHhc----------CCCCCCccccHHHHHHHHHHHhCCC
Confidence 999999999987644222110 12223577899999764 2356889999999999999999998
Q ss_pred CCCchHHHH-H---HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA-Y---RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~-~---~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
||....... . ...... ........+..++++|.+||+.+|.+||++.++++|
T Consensus 215 p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 215 PYLREPPLRALFLITTKGIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 886543221 1 111111 111222356789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=252.02 Aligned_cols=197 Identities=19% Similarity=0.146 Sum_probs=149.2
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.. ....|+||||++ |+|.+++.. +..+++..+..++.|++.||.|||++||+||||||+||++
T Consensus 62 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili 141 (284)
T cd05081 62 LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV 141 (284)
T ss_pred CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE
Confidence 579999999997643 357899999998 699999965 4568999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||+++....... .........++..|+|||.+. +..++.++|||||||++|||++|
T Consensus 142 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~ 207 (284)
T cd05081 142 ESENRVKIGDFGLTKVLPQDKE----YYKVREPGESPIFWYAPESLT----------ESKFSVASDVWSFGVVLYELFTY 207 (284)
T ss_pred CCCCeEEECCCcccccccCCCc----ceeecCCCCCceEeeCHHHhc----------cCCcChHHHHHHHHHHHHHHhhc
Confidence 9999999999999875522111 100111122345699999764 33578899999999999999998
Q ss_pred CCCCCchHHHH-------------------HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLA-------------------YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
..++....... ..... .....+...+..+.+||.+||..+|++|||+.|+++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 208 SDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN--GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred CCcCCCcchhhhhhcccccccccchHHHHHHHhcC--CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 55543221110 01111 111123345678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=230.19 Aligned_cols=282 Identities=18% Similarity=0.249 Sum_probs=217.8
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC---CCEEEEEeCCCcEEEE
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH---SAQVVVGACDGIIHMF 1133 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~---~~~las~s~DG~I~vw 1133 (1472)
|.+.|.++... +++++||+.||++++||... +...++.+|+++|.+++|.-- ...|++||.|.++++|
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G-------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw 174 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG-------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLW 174 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCC-------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEE
Confidence 88899998887 78999999999999999864 266788999999999888643 3369999999999999
Q ss_pred EccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC----------------
Q 000470 1134 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---------------- 1197 (1472)
Q Consensus 1134 dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~---------------- 1197 (1472)
.++... .....+ ....+|...|.++...++ +..+++|+.|.+|.+|+..+.
T Consensus 175 ~~~~~~---------~~~~~~-~~~~GHk~~V~sVsv~~s---gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 175 KWNVGE---------NKVKAL-KVCRGHKRSVDSVSVDSS---GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred EecCch---------hhhhHH-hHhcccccceeEEEecCC---CCeEEeecccceeeecccCCCccccccccchhhhhhh
Confidence 987311 011111 111267778888888887 779999999999999993210
Q ss_pred ---------CccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCc
Q 000470 1198 ---------SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1268 (1472)
Q Consensus 1198 ---------~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~ 1268 (1472)
..+-++. +|.+.|.++.|++ ...+.+++.|.+|+.||+.++..+..... ...+.++.+ +|..
T Consensus 242 ~~~~~~~~r~P~vtl~--GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~-~~~~--- 312 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLE--GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISY-SPLS--- 312 (423)
T ss_pred hhhhcccccCceEEec--ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeec-cccc---
Confidence 1122333 4899999999998 67899999999999999999988877654 346778877 6644
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000470 1269 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1269 ~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
.++++|+.|..+++||-+++.-..+-. ...
T Consensus 313 ------~Ll~~gssdr~irl~DPR~~~gs~v~~--------------------------------------------s~~ 342 (423)
T KOG0313|consen 313 ------KLLASGSSDRHIRLWDPRTGDGSVVSQ--------------------------------------------SLI 342 (423)
T ss_pred ------ceeeecCCCCceeecCCCCCCCceeEE--------------------------------------------eee
Confidence 489999999999999988763221111 114
Q ss_pred CCcCCceEeccCCCC--cEEEccCCCeEEEEeCCCCC-CceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhh
Q 000470 1349 PRLLGIRSLLPLPGG--DLLTGGTDLKIRRWDHCSPG-RSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1425 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g--~llTgg~Dg~IrlWDl~~~~-~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1425 (1472)
+|...|.++.|+|.. .|++|+.|+++++||+++.+ ..|.+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------ 386 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------ 386 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec------------------------------------
Confidence 566689999999987 67799999999999998776 334333
Q ss_pred hhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1426 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1426 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+|.|.|.++. |+ .+.+|+|||.|..|+|++
T Consensus 387 ---------------~h~DKvl~vd-W~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 387 ---------------GHNDKVLSVD-WN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred ---------------cCCceEEEEe-cc-CCceEEeccCcceEEEec
Confidence 3999999995 64 456899999999999985
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=263.81 Aligned_cols=195 Identities=15% Similarity=0.161 Sum_probs=153.4
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--------------------------------------------
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------------------------------- 37 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------------------------------------------- 37 (1472)
||||+++++++..++..|+||||+. |+|.+++...
T Consensus 100 H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T cd05107 100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYM 179 (401)
T ss_pred CCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcccc
Confidence 9999999999999999999999999 7999998542
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 000470 38 ------------------------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 38 ------------------------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~g 63 (1472)
+.++...+..++.||+.||+|||+.|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 259 (401)
T cd05107 180 DMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN 259 (401)
T ss_pred ccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 23567788899999999999999999
Q ss_pred CeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+|||++..+.++|+|||+++......... ......++..|+|||.+. ...++.++||
T Consensus 260 ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv 324 (401)
T cd05107 260 CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI-----SKGSTFLPLKWMAPESIF----------NNLYTTLSDV 324 (401)
T ss_pred cCcccCCcceEEEeCCCEEEEEecCcceecccccccc-----cCCCcCCCCceeChHHhc----------CCCCCcHhHH
Confidence 9999999999999999999999999987542211100 011223567799999764 2356889999
Q ss_pred HHHHHHHHHHHh-CCCCCCchHH----HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 144 FAVGCVIAELFL-EVPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 144 wSlG~il~eLlt-g~~pf~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||+||++|||++ |.+||..... ......... ...+...+..+.+|+.+||..+|.+||++.|+++.++.
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 999999999998 7888854221 122222221 22344567899999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=259.72 Aligned_cols=198 Identities=19% Similarity=0.234 Sum_probs=153.6
Q ss_pred CCCCcceeeEEEEeC----CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 2 SSTPCVHKKFWQETD----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~----~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
+||||+++++..... ...|+++||++++|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~ 139 (332)
T cd07857 60 GHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN 139 (332)
T ss_pred CCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc
Confidence 599999999875432 4689999999999999998877899999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++......... ........|+..|+|||.+.. ...++.++||||+||++|+|++|.
T Consensus 140 ~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~~l~~g~ 207 (332)
T cd07857 140 ADCELKICDFGLARGFSENPGEN---AGFMTEYVATRWYRAPEIMLS---------FQSYTKAIDVWSVGCILAELLGRK 207 (332)
T ss_pred CCCCEEeCcCCCceecccccccc---cccccCcccCccccCcHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999987653221111 111223457888999997641 235788999999999999999999
Q ss_pred CCCCchHHHHH----Hh-----------------------c--CC--CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 158 PFFELSHLLAY----RR-----------------------G--QY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 158 ~pf~~~~~~~~----~~-----------------------~--~~--~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
+||...+.... .. . .. ..........+..+++|+.+||+.||++||+++
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ 287 (332)
T cd07857 208 PVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE 287 (332)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 99964321110 00 0 00 000111223467899999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
|+++|
T Consensus 288 ~ll~~ 292 (332)
T cd07857 288 EALEH 292 (332)
T ss_pred HHhcC
Confidence 99987
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=249.62 Aligned_cols=192 Identities=21% Similarity=0.284 Sum_probs=159.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++..+...|+||||++ ++|.+++.. ...+++.++..++.|++.||.|||+.|++||||||+||+
T Consensus 56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~ 135 (256)
T cd08530 56 VNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANIL 135 (256)
T ss_pred CCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEE
Confidence 579999999999999999999999998 599998865 356899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||+++..... ......++..|+|||.+. +..++.++|+||+|+++|+|++
T Consensus 136 ~~~~~~~kl~d~g~~~~~~~~---------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 136 LVANDLVKIGDLGISKVLKKN---------MAKTQIGTPHYMAPEVWK----------GRPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred EecCCcEEEeeccchhhhccC---------CcccccCCccccCHHHHC----------CCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999998765322 112344678899999874 3356789999999999999999
Q ss_pred CCCCCCchHHHHHHhcCC-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|++||.......+..... .....++...+.++++++.+||..+|++||++.|+++|
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 197 FAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 999997665544332211 11223444567889999999999999999999999988
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=248.13 Aligned_cols=194 Identities=24% Similarity=0.238 Sum_probs=160.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++|||++++.+.+..+...|+|+||++ ++|.+++... ..+++.++..++.|++.||.+||++|++|+||+|+||+
T Consensus 56 l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil 135 (258)
T cd08215 56 LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIF 135 (258)
T ss_pred cCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeE
Confidence 579999999999999999999999999 5999999764 66999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++.++.++|+|||.+....... .......+++.|+|||.+. ...++.++|+||+|+++++|++
T Consensus 136 ~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~ 198 (258)
T cd08215 136 LTSNGLVKLGDFGISKVLSSTV-------DLAKTVVGTPYYLSPELCQ----------NKPYNYKSDIWSLGCVLYELCT 198 (258)
T ss_pred EcCCCcEEECCccceeecccCc-------ceecceeeeecccChhHhc----------cCCCCccccHHHHHHHHHHHHc
Confidence 9999999999999887543221 1223345778899999764 3357789999999999999999
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.+||.......+.... ......++...+..+.+++.+||..+|++||++.|+++|
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 199 LKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 99999765443332211 112233455667889999999999999999999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=248.83 Aligned_cols=196 Identities=15% Similarity=0.092 Sum_probs=152.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++. +...|++|||+. ++|.+++... ..+++.++..++.|++.||+|||+.|++||||||+||+++
T Consensus 58 l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 136 (260)
T cd05067 58 LQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS 136 (260)
T ss_pred cCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc
Confidence 57999999999874 457899999998 6999998653 3589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
+++.++|+|||.+......... ......++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 137 ETLCCKIADFGLARLIEDNEYT------AREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred CCCCEEEccCcceeecCCCCcc------cccCCcccccccCHHHhc----------cCCcCcccchHHHHHHHHHHHhCC
Confidence 9999999999988654311110 011223456799999764 3357889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
++||.......... .........+...+..+.++|.+||..+|++||+++++++.++
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 201 RIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 99996443222211 1111112234456678999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=249.66 Aligned_cols=192 Identities=17% Similarity=0.226 Sum_probs=156.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+...|++|||++ ++|.+++. ....+++..++.++.|++.||.|||+ .|++||||||+||
T Consensus 66 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ni 145 (269)
T cd08528 66 LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNI 145 (269)
T ss_pred CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHE
Confidence 479999999999999999999999999 59988873 23468999999999999999999996 7899999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
++++++.++|+|||.+....... ......++..|+|||.+. ...++.++|+||||+++|||+
T Consensus 146 l~~~~~~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~ll~~l~ 207 (269)
T cd08528 146 MLGEDDKVTITDFGLAKQKQPES--------KLTSVVGTILYSCPEIVK----------NEPYGEKADVWAFGCILYQMC 207 (269)
T ss_pred EECCCCcEEEecccceeeccccc--------ccccccCcccCcChhhhc----------CCCCchHHHHHHHHHHHHHHH
Confidence 99999999999999987542211 123345678899999774 235788999999999999999
Q ss_pred hCCCCCCchHHHHHH----hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 155 LEVPFFELSHLLAYR----RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 155 tg~~pf~~~~~~~~~----~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
+|++||......... ...+.+ ......++.+.++|.+||+.||++||++.|+..++
T Consensus 208 ~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 208 TLQPPFYSTNMLSLATKIVEAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred hCCCcccccCHHHHHHHHhhccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 999999765443222 222221 12224567899999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=253.92 Aligned_cols=196 Identities=27% Similarity=0.388 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|||++++++++..+ +..|+|+||++++|.+++... ..+++.+++.++.||+.||+|||++|++|+||||+||+++
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~ 134 (287)
T cd07840 55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN 134 (287)
T ss_pred ccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc
Confidence 4799999999999988 899999999999999998775 5689999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
+++.++|+|||.+......... ......++..|+|||.+.+ ...++.++|||||||++|||++|+
T Consensus 135 ~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~t~~ 199 (287)
T cd07840 135 NDGVLKLADFGLARPYTKRNSA------DYTNRVITLWYRPPELLLG---------ATRYGPEVDMWSVGCILAELFLGK 199 (287)
T ss_pred CCCCEEEccccceeeccCCCcc------cccccccccccCCceeeEc---------cccCChHHHHHHHHHHHHHHHhCC
Confidence 9999999999998765433211 1122335678999997642 224688999999999999999999
Q ss_pred CCCCchHHHH----HHhcCCCC-------------------C--------cccCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 000470 158 PFFELSHLLA----YRRGQYDP-------------------S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 158 ~pf~~~~~~~----~~~~~~~~-------------------~--------~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~ 206 (1472)
+||....... .......+ . ..+....++.+.++|.+||..||++||+++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~ 279 (287)
T cd07840 200 PIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD 279 (287)
T ss_pred CCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 9986433211 11100000 0 001112367899999999999999999999
Q ss_pred HHHHH
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 elL~~ 211 (1472)
++++|
T Consensus 280 ~~l~~ 284 (287)
T cd07840 280 QALQH 284 (287)
T ss_pred HHhhC
Confidence 99987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=263.89 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=159.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|+|||||+||++...+..+|+|||+|. |+|.++|.+.+ .++..++.+++++.++||+|||+++++||||-.+|+|++.
T Consensus 218 l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~ 297 (474)
T KOG0194|consen 218 LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK 297 (474)
T ss_pred CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC
Confidence 689999999999999999999999999 69999999877 4999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
.+.+||+|||+++... .+..--....-...|+|||.+. ...|+.++||||+||++||+++ |.
T Consensus 298 ~~~vKISDFGLs~~~~-------~~~~~~~~~klPirWLAPEtl~----------~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGS-------QYVMKKFLKKLPIRWLAPETLN----------TGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred CCeEEeCccccccCCc-------ceeeccccccCcceecChhhhc----------cCccccccchhheeeeEEeeeccCC
Confidence 9999999999977542 0100000112356799999764 4488999999999999999999 66
Q ss_pred CCCCchHHHHHHhcC-C-CCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 158 PFFELSHLLAYRRGQ-Y-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~-~-~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.||..-+....+... . ......+...+..+..++.+|+..||++||++.++.+.+.
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 688765544443322 1 1122344466778999999999999999999999998743
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=224.71 Aligned_cols=303 Identities=15% Similarity=0.181 Sum_probs=229.3
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc---------cccc---cccceEEeccCCceEEEEEecCC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE---------KDIS---FRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e---------~~~~---~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
-..+..|++++.+-+|||||.++||||.|-+|||.|+.++- .+.+ ..-..++-.|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 45788999999999999999999999999999999998421 1111 11234555678889999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec-CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD-TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
+.|++|+.|++|++||..... ..+.+. ..+-..+.++.|+|. |.+|++|+....+++||+.+-
T Consensus 185 ~ILiS~srD~tvKlFDfsK~s-------------aKrA~K~~qd~~~vrsiSfHPs---GefllvgTdHp~~rlYdv~T~ 248 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTS-------------AKRAFKVFQDTEPVRSISFHPS---GEFLLVGTDHPTLRLYDVNTY 248 (430)
T ss_pred heEEeccCCCeEEEEecccHH-------------HHHHHHHhhccceeeeEeecCC---CceEEEecCCCceeEEeccce
Confidence 999999999999999986210 001111 134467889999998 889999999999999999998
Q ss_pred Cccc-eeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccC-CceeEEeecCCCCCccccCCCC
Q 000470 1198 SNTW-TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1198 ~~~~-~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~-~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
++.- ......|.+.|+++.+++.|+..++|+.||.|++||=-.+.|+.++...|.+ .|.+..| . .+++
T Consensus 249 QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~F-t---------kn~k 318 (430)
T KOG0640|consen 249 QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVF-T---------KNGK 318 (430)
T ss_pred eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEE-c---------cCCe
Confidence 7743 2344568999999999999999999999999999999999999999876654 5666666 3 3467
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++.+.|..|++|++.+|.+++.+......+... --+
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~------------------------------------------~rt 356 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK------------------------------------------HRT 356 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEEecCCcccchh------------------------------------------hhh
Confidence 99999999999999999999999987433211000 001
Q ss_pred EeccCCC-CcEEEcc-CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhh
Q 000470 1356 SLLPLPG-GDLLTGG-TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1433 (1472)
Q Consensus 1356 sl~~~p~-g~llTgg-~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1433 (1472)
...|... .+++.-. ..+.+.-||-++..+...+
T Consensus 357 qAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~--------------------------------------------- 391 (430)
T KOG0640|consen 357 QAVFNHTEDYVLFPDEASNSLCSWDARTADRVALL--------------------------------------------- 391 (430)
T ss_pred hhhhcCccceEEccccccCceeeccccchhhhhhc---------------------------------------------
Confidence 1112222 2444333 3677888997766553211
Q ss_pred hhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1434 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1434 ~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.-+|.+++..+ .-+|.++.++|||.|-.+++|.
T Consensus 392 -----slgHn~a~R~i-~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 392 -----SLGHNGAVRWI-VHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred -----ccCCCCCceEE-EeCCCCCceeeecccceeeeee
Confidence 12599999999 4678899999999999999995
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=253.88 Aligned_cols=196 Identities=15% Similarity=0.124 Sum_probs=153.4
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNILv~~~ 79 (1472)
+||||+++++++.++...|++|||+.++|.+.+.. ...+++..+..++.||+.||.|||+ .||+||||||+||+++.+
T Consensus 72 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~ 151 (296)
T cd06618 72 DCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS 151 (296)
T ss_pred CCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC
Confidence 59999999999999999999999999888777655 4468999999999999999999997 699999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ .....++..|+|||.+.... ....++.++|||||||++|+|++|++|
T Consensus 152 ~~~kL~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 152 GNVKLCDFGISGRLVDSKA--------KTRSAGCAAYMAPERIDPPD------PNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred CCEEECccccchhccCCCc--------ccCCCCCccccCHhhcCCCC------CccccccchhHHHHHHHHHHHHhCCCC
Confidence 9999999998765421111 11223567899999875221 124578899999999999999999999
Q ss_pred CCchH--HHHHHhcCCC--CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSH--LLAYRRGQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~--~~~~~~~~~~--~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.... ...+.+.... +........+.++++||.+||..||++||+++++++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 218 YKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 86521 1222211111 1111122356789999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-25 Score=258.13 Aligned_cols=202 Identities=22% Similarity=0.301 Sum_probs=151.4
Q ss_pred CCCCCcceeeEEEEeC--------CeEEEEecccCCcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000470 1 MSSTPCVHKKFWQETD--------KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------~~~~lV~Ey~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKp 71 (1472)
++||||+++++++... ..+|+|+||+.++|.+.+.. ...+++.+++.++.||++||+|||++||+||||||
T Consensus 64 l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p 143 (311)
T cd07866 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKA 143 (311)
T ss_pred cCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 5899999999987543 35799999999999888865 44699999999999999999999999999999999
Q ss_pred CCEEEccCCcEEEEeccccccccCCCCCCCC----CceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSD----FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~a~~~~~~~~~~~~----~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
+||++++++.++|+|||+++........... ....+....+++.|+|||.+.. ...++.++||||+|
T Consensus 144 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG 214 (311)
T cd07866 144 ANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---------ERRYTTAVDIWGIG 214 (311)
T ss_pred HHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC---------CCccCchhHhHHHH
Confidence 9999999999999999988755332221110 0111123345778999997642 23578899999999
Q ss_pred HHHHHHHhCCCCCCchHHHH----HHh--cCCCC---------------------Cccc---CCCCCHHHHHHHHHhccc
Q 000470 148 CVIAELFLEVPFFELSHLLA----YRR--GQYDP---------------------SQHL---EKIPDSGIRKMILHMIQL 197 (1472)
Q Consensus 148 ~il~eLltg~~pf~~~~~~~----~~~--~~~~~---------------------~~~l---~~~~~~~l~~LI~~mL~~ 197 (1472)
|++|||++|++||....... +.. +...+ ...+ .....+.+.++|.+||+.
T Consensus 215 ~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 294 (311)
T cd07866 215 CVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL 294 (311)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc
Confidence 99999999999996433211 100 00000 0000 011235788999999999
Q ss_pred CcCCCCCHHHHHHH
Q 000470 198 EPELRFSAESYLQN 211 (1472)
Q Consensus 198 dP~~Rpsa~elL~~ 211 (1472)
||++|||+.|++.|
T Consensus 295 ~p~~R~t~~ell~~ 308 (311)
T cd07866 295 DPYKRLTASDALEH 308 (311)
T ss_pred CcccCcCHHHHhcC
Confidence 99999999999988
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-24 Score=231.96 Aligned_cols=256 Identities=18% Similarity=0.268 Sum_probs=218.4
Q ss_pred CCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+ -+|.+++.|+||+++|..|+|+..|+++||||.|-.+++||..+. ++++....+|...|.+++|.|.|+
T Consensus 132 ikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-----~~c~ks~~gh~h~vS~V~f~P~gd 206 (406)
T KOG0295|consen 132 IKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF-----FRCIKSLIGHEHGVSSVFFLPLGD 206 (406)
T ss_pred EEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH-----HHHHHHhcCcccceeeEEEEecCC
Confidence 34688 579999999999999999999999999999999999999998753 345556678888899999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
++++|+.|.+|+.|++++. -.......+...+.++..+.| |.++++++.|.+|++|-+.++++
T Consensus 207 ~ilS~srD~tik~We~~tg--------------~cv~t~~~h~ewvr~v~v~~D---Gti~As~s~dqtl~vW~~~t~~~ 269 (406)
T KOG0295|consen 207 HILSCSRDNTIKAWECDTG--------------YCVKTFPGHSEWVRMVRVNQD---GTIIASCSNDQTLRVWVVATKQC 269 (406)
T ss_pred eeeecccccceeEEecccc--------------eeEEeccCchHhEEEEEecCC---eeEEEecCCCceEEEEEeccchh
Confidence 9999999999999999841 112223356668888888888 88999999999999999999998
Q ss_pred cceeecCCCccceEEEEEcCC----------C-----CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCC
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPC----------G-----NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPP 1264 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~----------g-----~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~ 1264 (1472)
...+.. |..+|.|++|.|. + ..+.+|+.|++|++||+.++.++-++.. |...|..+.| +|.
T Consensus 270 k~~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af-~p~ 345 (406)
T KOG0295|consen 270 KAELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAF-SPG 345 (406)
T ss_pred hhhhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEE-cCC
Confidence 888877 7889999999764 2 4899999999999999999999988775 7778999998 776
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccccc
Q 000470 1265 PNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1265 ~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
++ +|++++.|++++|||+.+++|..++..
T Consensus 346 Gk---------yi~ScaDDktlrvwdl~~~~cmk~~~a------------------------------------------ 374 (406)
T KOG0295|consen 346 GK---------YILSCADDKTLRVWDLKNLQCMKTLEA------------------------------------------ 374 (406)
T ss_pred Ce---------EEEEEecCCcEEEEEeccceeeeccCC------------------------------------------
Confidence 54 999999999999999999999887752
Q ss_pred CCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEe
Q 000470 1345 NEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1345 ~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWD 1378 (1472)
|..-|+++.++.+. +++||+-|.++++|.
T Consensus 375 -----h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 375 -----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -----CcceeEEEecCCCCceEEeccccceeeeee
Confidence 22257888887665 788999999999996
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=269.29 Aligned_cols=195 Identities=25% Similarity=0.313 Sum_probs=156.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC--C--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP--P--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~--~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
.||||++||+.-.++...||..|.|..+|.|++... . .....+.+.+..|++.||++||+.+||||||||.||||+
T Consensus 561 ~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~ 640 (903)
T KOG1027|consen 561 EHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILIS 640 (903)
T ss_pred CCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEE
Confidence 599999999999999999999999999999999873 1 123356788899999999999999999999999999998
Q ss_pred c---C--CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 78 S---W--NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 78 ~---~--~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
. + ..++|+|||++|.... +...+.. ..+..||-+|+|||++... .-+.++|||||||++|+
T Consensus 641 ~~~~~~~~ra~iSDfglsKkl~~---~~sS~~r-~s~~sGt~GW~APE~L~~~----------~~~~avDiFslGCvfyY 706 (903)
T KOG1027|consen 641 VPSADGTLRAKISDFGLSKKLAG---GKSSFSR-LSGGSGTSGWQAPEQLRED----------RKTQAVDIFSLGCVFYY 706 (903)
T ss_pred ccCCCcceeEEecccccccccCC---Ccchhhc-ccCCCCcccccCHHHHhcc----------ccCcccchhhcCceEEE
Confidence 6 3 3699999999997732 2333443 4566789999999988633 23458999999999999
Q ss_pred HHhC-CCCCCchHH--HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLE-VPFFELSHL--LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg-~~pf~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.++| .+||...-. ..+..+.+... .+....+.++++||.+||..||..||+|.++|.|
T Consensus 707 vltgG~HpFGd~~~R~~NIl~~~~~L~-~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 707 VLTGGSHPFGDSLERQANILTGNYTLV-HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred EecCCccCCCchHHhhhhhhcCcccee-eeccCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 9998 999975432 23444554422 2333333389999999999999999999999999
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=250.57 Aligned_cols=193 Identities=23% Similarity=0.300 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
++||||+++++++.++...|+|+||++ ++|.+++.. ...+++.+++.++.|++.||.|||++|++|+||||+||+
T Consensus 59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nil 138 (260)
T cd08222 59 LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIF 138 (260)
T ss_pred CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheE
Confidence 579999999999999999999999999 599888753 456899999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++. +.++|+|||.++....... ......+++.|+|||.+. ...++.++|+||+|+++|+|++
T Consensus 139 i~~-~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~ 200 (260)
T cd08222 139 LKN-NLLKIGDFGVSRLLMGSCD-------LATTFTGTPYYMSPEALK----------HQGYDSKSDIWSLGCILYEMCC 200 (260)
T ss_pred eec-CCEeecccCceeecCCCcc-------cccCCCCCcCccCHHHHc----------cCCCCchhhHHHHHHHHHHHHh
Confidence 975 6799999998876532211 122345678899999764 2346778999999999999999
Q ss_pred CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||............ ....+.++...+..+.++|.+||..||++||++.|+++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 201 LAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 99888755443332221 122333455667889999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=254.12 Aligned_cols=193 Identities=19% Similarity=0.159 Sum_probs=154.5
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++ ++|.+++.+. .+++.++..++.|++.||.|||++|++||||||+||+++.+
T Consensus 73 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~ 151 (293)
T cd06647 73 NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 151 (293)
T ss_pred cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC
Confidence 479999999999999999999999999 6999998764 47899999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+........ ......+++.|+|||.+. ...++.++|+||+||++|++++|.+|
T Consensus 152 ~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~ll~~ll~g~~p 214 (293)
T cd06647 152 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPP 214 (293)
T ss_pred CCEEEccCcceeccccccc-------ccccccCChhhcCchhhc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998764421110 112234678899999764 23568899999999999999999999
Q ss_pred CCchHHHHHHhcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FELSHLLAYRRGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|...+........ ..+....+...+..++++|.+||..+|++||++++++.|
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 215 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 9754432211111 111111223345689999999999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=250.15 Aligned_cols=198 Identities=19% Similarity=0.185 Sum_probs=153.5
Q ss_pred CCCCCcceeeEEEEe--CCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~--~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.. +...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 63 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~ 142 (284)
T cd05038 63 LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV 142 (284)
T ss_pred CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE
Confidence 579999999999887 568999999998 69999997654 68999999999999999999999999999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++.++|+|||.+........ .........++..|+|||.+. ...++.++|||||||++|||++|
T Consensus 143 ~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~el~tg 208 (284)
T cd05038 143 ESEDLVKISDFGLAKVLPEDKD----YYYVKEPGESPIFWYAPECLR----------TSKFSSASDVWSFGVTLYELFTY 208 (284)
T ss_pred cCCCCEEEcccccccccccCCc----ceeccCCCCCcccccCcHHHc----------cCCCCcccchHHHhhhhheeecc
Confidence 9999999999998876531111 111111223455699999764 23678899999999999999999
Q ss_pred CCCCCchHH------------------HHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 157 VPFFELSHL------------------LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 157 ~~pf~~~~~------------------~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..||..... ........ ....+...+..+.+++.+||+.+|++||++.|+++.+..
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 209 GDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE--RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred CCCcccccchhccccccccccccHHHHHHHHHcCC--cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 777643211 11111111 111233445789999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=251.49 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=154.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
+||||+++++.++.+...|+||||+. |+|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++
T Consensus 63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 63 RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG 142 (288)
T ss_pred CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 59999999999999999999999999 69999998777799999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||+++........ ......++..|+|||.+... ....+.++||||+|+++|||++|..||
T Consensus 143 ~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~il~el~tg~~p~ 208 (288)
T cd05583 143 HVVLTDFGLSKEFLAEEEE------RAYSFCGTIEYMAPEVIRGG--------SGGHDKAVDWWSLGVLTFELLTGASPF 208 (288)
T ss_pred CEEEEECcccccccccccc------ccccccCCccccCHHHhcCC--------CCCCcchhhhHHHHHHHHHHHhCCCCc
Confidence 9999999987654322110 01123467889999976421 123578899999999999999999888
Q ss_pred Cch----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH---HHHHHH
Q 000470 161 ELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA---ESYLQN 211 (1472)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 211 (1472)
... ....+.+.........+...+..++++|.+||+.||++|||+ .++|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 209 TVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 532 122222222222223445567889999999999999999985 555665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=250.01 Aligned_cols=192 Identities=20% Similarity=0.166 Sum_probs=150.2
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeN 73 (1472)
++||||+++++++... ...|+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+|
T Consensus 56 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~n 135 (287)
T cd06621 56 CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSN 135 (287)
T ss_pred CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence 5899999999988553 47899999999 599887642 3458999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
|+++.++.++|+|||++........ ....++..|+|||.+. +..++.++|||||||++|+|
T Consensus 136 il~~~~~~~~l~dfg~~~~~~~~~~---------~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l 196 (287)
T cd06621 136 ILLTRKGQVKLCDFGVSGELVNSLA---------GTFTGTSFYMAPERIQ----------GKPYSITSDVWSLGLTLLEV 196 (287)
T ss_pred EEEecCCeEEEeecccccccccccc---------ccccCCccccCHHHhc----------CCCCCchhhHHHHHHHHHHH
Confidence 9999999999999998765432111 1234577899999764 34678899999999999999
Q ss_pred HhCCCCCCch--------HHHHHHhcCCCCC--cccC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELS--------HLLAYRRGQYDPS--QHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~--------~~~~~~~~~~~~~--~~l~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
++|..||... +...+......+. .... ...++.++++|.+||..||.+|||+.|+++|
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 9999888644 1222222211111 0011 1234679999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=255.57 Aligned_cols=196 Identities=22% Similarity=0.236 Sum_probs=153.1
Q ss_pred CCCCCcceeeEEEEeCC-eEEEEecccC-CcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCC
Q 000470 1 MSSTPCVHKKFWQETDK-AAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKG---ICHGDIKCEN 73 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-~~~lV~Ey~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~g---IvH~DLKpeN 73 (1472)
+.|||+|++++|+.+++ ..+||+|||+ |+|.++|..+. .|+|.....|+.++++||+|||... |+||||||+|
T Consensus 128 l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssN 207 (361)
T KOG1187|consen 128 LRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSN 207 (361)
T ss_pred CCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHH
Confidence 57999999999999888 5999999999 89999998765 7999999999999999999999854 9999999999
Q ss_pred EEEccCCcEEEEeccccccccCCCCCCCCCceeeccC-CCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
||+|++..+||+|||+++... .. ... ..+. .||..|+|||.+. .+.++.++||||||+++.|
T Consensus 208 ILLD~~~~aKlsDFGLa~~~~--~~---~~~--~~~~~~gt~gY~~PEy~~----------~g~lt~KsDVySFGVvllE 270 (361)
T KOG1187|consen 208 ILLDEDFNAKLSDFGLAKLGP--EG---DTS--VSTTVMGTFGYLAPEYAS----------TGKLTEKSDVYSFGVVLLE 270 (361)
T ss_pred eeECCCCCEEccCccCcccCC--cc---ccc--eeeecCCCCccCChhhhc----------cCCcCcccccccchHHHHH
Confidence 999999999999999996431 10 111 1122 7899999999664 3578999999999999999
Q ss_pred HHhCCCCCCchH------HHHH-----HhcCCC--CCcccC-CCCC-----HHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 153 LFLEVPFFELSH------LLAY-----RRGQYD--PSQHLE-KIPD-----SGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 153 Lltg~~pf~~~~------~~~~-----~~~~~~--~~~~l~-~~~~-----~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
|++|+++.+... +..+ ..+... ..+.+. ...+ ..+..+..+|++.+|.+||++.|+++.++
T Consensus 271 litgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 271 LITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 999987776321 2222 111111 122222 1111 23567788999999999999999988864
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=245.64 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=151.9
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|+||+++++++.. ...|++|||++ ++|.+++... ..+++.++..++.||+.||.|||+.|++||||||+||+++
T Consensus 58 l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~ 136 (260)
T cd05073 58 LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 136 (260)
T ss_pred cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc
Confidence 579999999999887 77899999998 6999999763 3578889999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
..+.++|+|||.+........ . ......++..|+|||.+. ...++.++|+|||||++|++++ |
T Consensus 137 ~~~~~~l~d~~~~~~~~~~~~-----~-~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 137 ASLVCKIADFGLARVIEDNEY-----T-AREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred CCCcEEECCCcceeeccCCCc-----c-cccCCcccccccCHhHhc----------cCCcCccccchHHHHHHHHHHhcC
Confidence 999999999998865421110 0 011122345699999764 2357889999999999999998 8
Q ss_pred CCCCCchHHHHHHh-cCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
.+||.......... .........+...+..+.+++.+||+.+|++||++.++++-+
T Consensus 201 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L 257 (260)
T cd05073 201 RIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257 (260)
T ss_pred CCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 98986543222111 111111123345567899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=259.72 Aligned_cols=197 Identities=20% Similarity=0.302 Sum_probs=149.1
Q ss_pred CCCCCcceeeEEEEeC--------------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000470 1 MSSTPCVHKKFWQETD--------------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--------------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH 66 (1472)
++||||+++++++... ...|+||||++++|.+++... .+++..++.++.||+.||+|||++||+|
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH 137 (342)
T cd07854 59 LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLH 137 (342)
T ss_pred cCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5799999999877654 358999999999999988754 5899999999999999999999999999
Q ss_pred cCCCCCCEEEccC-CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHH
Q 000470 67 GDIKCENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 145 (1472)
Q Consensus 67 ~DLKpeNILv~~~-~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 145 (1472)
|||||+||+++.. +.++|+|||.++........ ........++..|+|||.+.. ...++.++||||
T Consensus 138 ~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwS 204 (342)
T cd07854 138 RDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLS---------PNNYTKAIDMWA 204 (342)
T ss_pred CCCCHHHEEEcCCCceEEECCcccceecCCcccc----ccccccccccccccCHHHHhC---------ccccCchhhHHH
Confidence 9999999999854 57899999988754221111 111122346788999997642 235678999999
Q ss_pred HHHHHHHHHhCCCCCCchHH-HH---HHhc-----------------------CCCC---CcccCCCCCHHHHHHHHHhc
Q 000470 146 VGCVIAELFLEVPFFELSHL-LA---YRRG-----------------------QYDP---SQHLEKIPDSGIRKMILHMI 195 (1472)
Q Consensus 146 lG~il~eLltg~~pf~~~~~-~~---~~~~-----------------------~~~~---~~~l~~~~~~~l~~LI~~mL 195 (1472)
|||++|+|++|.+||..... .. .... .... ...+....+.++++||.+||
T Consensus 205 lGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 284 (342)
T cd07854 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQIL 284 (342)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHh
Confidence 99999999999988853221 11 0000 0000 00112235678999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 000470 196 QLEPELRFSAESYLQN 211 (1472)
Q Consensus 196 ~~dP~~Rpsa~elL~~ 211 (1472)
+.||++||+++|+++|
T Consensus 285 ~~dP~~R~t~~ell~h 300 (342)
T cd07854 285 TFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCchhccCHHHHhCC
Confidence 9999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=251.99 Aligned_cols=192 Identities=22% Similarity=0.288 Sum_probs=153.1
Q ss_pred CCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
||||++++++++.+...|+||||+.|+|++++.... .+++.++..++.|++.||.|||++|++|+||||+||+++..+
T Consensus 57 h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~ 136 (283)
T cd07830 57 HPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE 136 (283)
T ss_pred CCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 999999999999999999999999999999997754 689999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
.++|+|||.++....... .....++..|+|||.+.. ...++.++|+||+|++++||++|++||
T Consensus 137 ~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~s~G~~l~el~~g~~~~ 199 (283)
T cd07830 137 VVKIADFGLAREIRSRPP--------YTDYVSTRWYRAPEILLR---------STSYSSPVDIWALGCIMAELYTLRPLF 199 (283)
T ss_pred CEEEeecccceeccCCCC--------cCCCCCcccccCceeeec---------CcCcCCccchhhHHHHHHHHHhCCCcc
Confidence 999999998875422111 122346778999998742 234688999999999999999999999
Q ss_pred CchHHHH----HHhcCC-------------------C----C---CcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000470 161 ELSHLLA----YRRGQY-------------------D----P---SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210 (1472)
Q Consensus 161 ~~~~~~~----~~~~~~-------------------~----~---~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 210 (1472)
....... ...... . . ........+..++++|.+||+.||++||+++|++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 200 PGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 6432211 110000 0 0 00011122568999999999999999999999998
Q ss_pred H
Q 000470 211 N 211 (1472)
Q Consensus 211 ~ 211 (1472)
|
T Consensus 280 ~ 280 (283)
T cd07830 280 H 280 (283)
T ss_pred C
Confidence 8
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=251.97 Aligned_cols=195 Identities=24% Similarity=0.308 Sum_probs=155.0
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+|+||++++|.+++..+ ..+++.++..++.||+.||.|||++||+||||||+||+++.+
T Consensus 55 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~ 134 (283)
T cd05118 55 LNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE 134 (283)
T ss_pred hcCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC
Confidence 4799999999999999999999999999999998774 568999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+.....+. . ......++..|+|||.+.. ...++.++|+||+||++|+|++|++|
T Consensus 135 ~~~~l~df~~~~~~~~~~---~----~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~ 198 (283)
T cd05118 135 GVLKLADFGLARSFGSPV---R----PYTHYVVTRWYRAPELLLG---------DKGYSTPVDIWSVGCIFAELLSRRPL 198 (283)
T ss_pred CcEEEeeeeeeEecCCCc---c----cccCccCcccccCcHHHhc---------CCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 999999999887553221 0 1112335678999997642 22578899999999999999999999
Q ss_pred CCchHHHH----HHhcCCC--------------------------CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLA----YRRGQYD--------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~--------------------------~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|...+... ....... .........+..++++|.+||+.||.+||++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 199 FPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred CCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 96433211 1000000 00011123467899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
.|
T Consensus 279 ~~ 280 (283)
T cd05118 279 AH 280 (283)
T ss_pred hC
Confidence 88
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-24 Score=256.75 Aligned_cols=196 Identities=15% Similarity=0.187 Sum_probs=150.6
Q ss_pred CCCCcceeeEEEEe-CCeEEEEecccC-CcHHHHHhCC------------------------------------------
Q 000470 2 SSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP------------------------------------------ 37 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~-~~~~~lV~Ey~~-gsL~d~l~~~------------------------------------------ 37 (1472)
.||||+++++++.. +...|++|||++ |+|.+++..+
T Consensus 69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (343)
T cd05103 69 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSA 148 (343)
T ss_pred CCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccc
Confidence 58999999998765 457899999999 6999998642
Q ss_pred -------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccccc
Q 000470 38 -------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 92 (1472)
Q Consensus 38 -------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~ 92 (1472)
..++......++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~ 228 (343)
T cd05103 149 SSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARD 228 (343)
T ss_pred cccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccc
Confidence 1367778889999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCchH----HHH
Q 000470 93 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLA 167 (1472)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~ 167 (1472)
...... .....+..++..|+|||.+. ...++.++|||||||++|+|++ |.+||.... ...
T Consensus 229 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 293 (343)
T cd05103 229 IYKDPD-----YVRKGDARLPLKWMAPETIF----------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 293 (343)
T ss_pred cccCcc-----hhhcCCCCCCcceECcHHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH
Confidence 421110 01112233456799999764 3357889999999999999997 788885432 111
Q ss_pred HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 168 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
..... .....+...++.+.+++.+||+.||++||++.|+++++..
T Consensus 294 ~~~~~--~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 294 RLKEG--TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred HHhcc--CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 1122334456789999999999999999999999999653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=252.88 Aligned_cols=196 Identities=27% Similarity=0.401 Sum_probs=152.3
Q ss_pred CCCCCcceeeEEEEeCC----------eEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 000470 1 MSSTPCVHKKFWQETDK----------AAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----------~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DL 69 (1472)
++||||+++++++.++. ..|+|+||++++|.+.+... ..+++.+++.++.||+.||.|||+.||+||||
T Consensus 63 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl 142 (302)
T cd07864 63 LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDI 142 (302)
T ss_pred CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 57999999999987655 89999999999998888764 45899999999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHH
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~i 149 (1472)
||+||++++++.+||+|||.+.........+ .....++..|+|||.+.. ...++.++||||+||+
T Consensus 143 ~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~ 207 (302)
T cd07864 143 KCSNILLNNKGQIKLADFGLARLYNSEESRP------YTNKVITLWYRPPELLLG---------EERYGPAIDVWSCGCI 207 (302)
T ss_pred CHHHEEECCCCcEEeCcccccccccCCcccc------cccceeccCccChHHhcC---------CCCCCchhHHHHHHHH
Confidence 9999999999999999999887543221111 112234667999997642 2246789999999999
Q ss_pred HHHHHhCCCCCCchHHHH----HHhc--CCCCC------------------------cccCCCCCHHHHHHHHHhcccCc
Q 000470 150 IAELFLEVPFFELSHLLA----YRRG--QYDPS------------------------QHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 150 l~eLltg~~pf~~~~~~~----~~~~--~~~~~------------------------~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
+|||++|++||...+... +... ...+. .......+..+.++|.+||+.||
T Consensus 208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 287 (302)
T cd07864 208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287 (302)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence 999999999996443211 1111 00000 00112346789999999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++||+++++++|
T Consensus 288 ~~Rp~~~~il~~ 299 (302)
T cd07864 288 SKRCTAEEALNS 299 (302)
T ss_pred hhCCCHHHHhcC
Confidence 999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=239.37 Aligned_cols=249 Identities=16% Similarity=0.288 Sum_probs=209.8
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..+..|.+.|-++.|+|.-..++++=..|.|.||+.++.. -...++....+|.+..|...-+++++|++|+.|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt------mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT------MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIR 80 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce------eeeeeeecccchhhheeeeccceEEEecCCceEE
Confidence 4566689999999999999999999999999999998754 2234555567899999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC-CccceeecCCCcc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEG 1210 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~-~~~~~l~~~~h~g 1210 (1472)
||+..+.. .+. ....|.+-+.+++.+|. .+++++++.|-.|++||-..+ .+.+++++ |..
T Consensus 81 Vfnynt~e-------------kV~-~FeAH~DyIR~iavHPt---~P~vLtsSDDm~iKlW~we~~wa~~qtfeG--H~H 141 (794)
T KOG0276|consen 81 VFNYNTGE-------------KVK-TFEAHSDYIRSIAVHPT---LPYVLTSSDDMTIKLWDWENEWACEQTFEG--HEH 141 (794)
T ss_pred EEecccce-------------eeE-EeeccccceeeeeecCC---CCeEEecCCccEEEEeeccCceeeeeEEcC--cce
Confidence 99987421 122 23357778899999998 779999999999999998764 56778877 888
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000470 1211 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VW 1289 (1472)
.|.+++|.| |.+.+++|+-|++|++|.+....+..++. +|..+|++++++ +.+ +.|++++|+.|..|+||
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vdyy-~~g-------dkpylIsgaDD~tiKvW 212 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVDYY-TGG-------DKPYLISGADDLTIKVW 212 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee-ccccCcceEEec-cCC-------CcceEEecCCCceEEEe
Confidence 999999999 67999999999999999999999988888 588899999994 333 36899999999999999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEc
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTg 1368 (1472)
|..+..|++++. +|...|.+++|+|.- .++||
T Consensus 213 DyQtk~CV~TLe-----------------------------------------------GHt~Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 213 DYQTKSCVQTLE-----------------------------------------------GHTNNVSFVFFHPELPIIISG 245 (794)
T ss_pred ecchHHHHHHhh-----------------------------------------------cccccceEEEecCCCcEEEEe
Confidence 999999988875 334468899999876 77799
Q ss_pred cCCCeEEEEeCCC
Q 000470 1369 GTDLKIRRWDHCS 1381 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~ 1381 (1472)
|+||+||+|+-.+
T Consensus 246 sEDGTvriWhs~T 258 (794)
T KOG0276|consen 246 SEDGTVRIWNSKT 258 (794)
T ss_pred cCCccEEEecCcc
Confidence 9999999998654
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=251.59 Aligned_cols=194 Identities=26% Similarity=0.349 Sum_probs=155.2
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCCcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++......|+|+||++++|.+++... ..+++.+++.++.|++.||+|||++||+||||+|+||+++.+
T Consensus 55 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~ 134 (282)
T cd07829 55 LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD 134 (282)
T ss_pred cCCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC
Confidence 4799999999999999999999999999999999876 569999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.++....... ......++..|+|||.+.. ...++.++||||+||++|||++|.+|
T Consensus 135 ~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~ 198 (282)
T cd07829 135 GVLKLADFGLARAFGIPLR-------TYTHEVVTLWYRAPEILLG---------SKHYSTAVDIWSVGCIFAEMITGKPL 198 (282)
T ss_pred CCEEEecCCcccccCCCcc-------ccCccccCcCcCChHHhcC---------CcCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999999998875532211 1122334677999997742 22568899999999999999999999
Q ss_pred CCchHHHHH----Hh--------------------cCCCC-----C-cccCCCCCHHHHHHHHHhcccCcCCCCCHHHHH
Q 000470 160 FELSHLLAY----RR--------------------GQYDP-----S-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 160 f~~~~~~~~----~~--------------------~~~~~-----~-~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL 209 (1472)
|........ .. ..+.. . ..++. .+..+.++|.+||..||++||++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 199 FPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPR-LDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred CCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccc-ccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 965432111 00 00000 0 01112 256899999999999999999999999
Q ss_pred HH
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 278 ~~ 279 (282)
T cd07829 278 KH 279 (282)
T ss_pred hC
Confidence 98
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-24 Score=234.09 Aligned_cols=283 Identities=18% Similarity=0.295 Sum_probs=215.2
Q ss_pred eeeeccccccceeEEEEcCCC-CEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~-~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.|+.|.||++.|.+++=+|.. ..++|||.||.|+|||+..-+ +..++.+|.+.|..+++.. ..++++|.|.
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~------~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE------CIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh------hhheeecccCceeeEEecc--cceEEecCCc
Confidence 788999999999999999976 689999999999999998765 5667888999999999876 7789999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+|+.|.++. . ..+.+.. ...+..+.-+.. ...+++++. .|.+||.....++..+.- .
T Consensus 130 tvK~wk~~~------~--------p~~tilg--~s~~~gIdh~~~---~~~FaTcGe--~i~IWD~~R~~Pv~smsw--G 186 (433)
T KOG0268|consen 130 TVKQWKIDG------P--------PLHTILG--KSVYLGIDHHRK---NSVFATCGE--QIDIWDEQRDNPVSSMSW--G 186 (433)
T ss_pred ceeeeeccC------C--------cceeeec--cccccccccccc---cccccccCc--eeeecccccCCccceeec--C
Confidence 999999872 1 1111111 112222222221 235555544 699999998888888875 5
Q ss_pred ccceEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1209 EGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g-~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
.+.|.|+.|+|-. ..|++|.+|+.|.|||+|...+++..... -..+.|+| .|... .+++|..|..+.
T Consensus 187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~Isw-nPeaf---------nF~~a~ED~nlY 254 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICW-NPEAF---------NFVAANEDHNLY 254 (433)
T ss_pred CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee--ccccceec-Ccccc---------ceeeccccccce
Confidence 6789999999954 67788889999999999999999887653 35678888 88432 467777888999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll 1366 (1472)
.+|++..+.. +....+|...|.++.|+|.| .++
T Consensus 255 ~~DmR~l~~p----------------------------------------------~~v~~dhvsAV~dVdfsptG~Efv 288 (433)
T KOG0268|consen 255 TYDMRNLSRP----------------------------------------------LNVHKDHVSAVMDVDFSPTGQEFV 288 (433)
T ss_pred ehhhhhhccc----------------------------------------------chhhcccceeEEEeccCCCcchhc
Confidence 9998864321 11124677789999999999 799
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccce
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
|||-|++||+|....+.. ++.|.++ --..|
T Consensus 289 sgsyDksIRIf~~~~~~S--------------RdiYhtk------------------------------------RMq~V 318 (433)
T KOG0268|consen 289 SGSYDKSIRIFPVNHGHS--------------RDIYHTK------------------------------------RMQHV 318 (433)
T ss_pred cccccceEEEeecCCCcc--------------hhhhhHh------------------------------------hhhee
Confidence 999999999999865432 2222110 12357
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.+|. |+.|.++|+|||+||.|++||
T Consensus 319 ~~Vk-~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 319 FCVK-YSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred eEEE-EeccccEEEecCCCcceeeee
Confidence 8885 999999999999999999997
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=257.43 Aligned_cols=190 Identities=22% Similarity=0.279 Sum_probs=148.2
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++.... .+|+|+||+.++|.+++. ..+++.++.+++.|++.||+|||++||+||||||+||
T Consensus 71 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NI 148 (342)
T cd07879 71 MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL 148 (342)
T ss_pred cCCCCccchhheecccccCCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 57999999999987653 469999999988888764 3489999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||+++..... . ....++..|+|||.+.. ...++.++|||||||++|||+
T Consensus 149 ll~~~~~~kL~dfg~~~~~~~~------~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 149 AVNEDCELKILDFGLARHADAE------M----TGYVVTRWYRAPEVILN---------WMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred EECCCCCEEEeeCCCCcCCCCC------C----CCceeeecccChhhhcC---------ccccCchHHHHHHHHHHHHHH
Confidence 9999999999999998754211 0 12235678999997642 235788999999999999999
Q ss_pred hCCCCCCchHHHH----HHhcC------------------------CCCCcc---cCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLLA----YRRGQ------------------------YDPSQH---LEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~~~------------------------~~~~~~---l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|+.||....... +.... ..+... .....++.+.+||.+||+.||++||
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 289 (342)
T cd07879 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL 289 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc
Confidence 9999996543211 11000 000000 1123456789999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
+++|++.|
T Consensus 290 ~~~e~l~h 297 (342)
T cd07879 290 TATEALEH 297 (342)
T ss_pred CHHHHhcC
Confidence 99999988
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=241.88 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=164.8
Q ss_pred CCCCCcceeeEEEEeC-CeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETD-KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--GICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~-~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--gIvH~DLKpeNILv 76 (1472)
|.||-||++|++|.-+ ..+|-|+|||+| +|.-||+....+++.|++.|+.||+.||.||.+. -|||-||||.|||+
T Consensus 524 LDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILL 603 (775)
T KOG1151|consen 524 LDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILL 603 (775)
T ss_pred cCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEE
Confidence 6899999999999665 578999999997 8888999988899999999999999999999986 59999999999999
Q ss_pred cc---CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHH
Q 000470 77 TS---WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 77 ~~---~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 153 (1472)
.+ .|.+||+|||+++.......+..+-........||-+|++||.|.-.. ....++.++||||+|+|+|..
T Consensus 604 v~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk------ePPKIsnKVDVWSvGVIFyQC 677 (775)
T KOG1151|consen 604 VNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK------EPPKISNKVDVWSVGVIFYQC 677 (775)
T ss_pred ecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCC------CCCccccceeeEeeehhhhhh
Confidence 54 478999999999988655555444444556677999999999986321 134688999999999999999
Q ss_pred HhCCCCCCchHHH----HHHhcCCCCCcc--cCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 154 FLEVPFFELSHLL----AYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 154 ltg~~pf~~~~~~----~~~~~~~~~~~~--l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.|+.||...+.. .+.......... ..+..+.++++||++||++.-++|..+.++..+
T Consensus 678 lYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 678 LYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred hccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 9999999654321 111111111112 223567889999999999999999999999887
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-24 Score=246.28 Aligned_cols=196 Identities=20% Similarity=0.211 Sum_probs=156.5
Q ss_pred CCCCCcceeeEEEEeC--CeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~--~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++||||+++++++.+. ..+|+++||++ ++|.+++...+.+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 140 (264)
T cd06653 61 LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD 140 (264)
T ss_pred cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 5899999999998764 46899999998 59999998877789999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 157 (1472)
.++.++|+|||.++........... .....++..|+|||.+. +..++.++|+|||||++|+|++|+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~ 206 (264)
T cd06653 141 SAGNVKLGDFGASKRIQTICMSGTG----IKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVACTVVEMLTEK 206 (264)
T ss_pred CCCCEEECccccccccccccccCcc----ccccCCcccccCHhhhc----------CCCCCccccHHHHHHHHHHHHhCC
Confidence 9999999999998754321111111 12234678899999764 234678899999999999999999
Q ss_pred CCCCchH-HHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 158 PFFELSH-LLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 158 ~pf~~~~-~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+||.... .....+.. ....+.++...++.+.++|.+||+ +|.+||++.+++.|
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 207 PPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 9996443 22222222 222344566677889999999999 57999999999988
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=238.22 Aligned_cols=287 Identities=17% Similarity=0.281 Sum_probs=231.7
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC-CcE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-GII 1130 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D-G~I 1130 (1472)
..|.+....|++.+|++....+|+|=..|...++++.... ..........+|..++|+..|+++|.|+.. |.+
T Consensus 259 ~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~------lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQL 332 (893)
T KOG0291|consen 259 HYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFN------LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQL 332 (893)
T ss_pred eeecccccceeeeeccCCceEEEEEecCCeeEEEecCCce------EEEEeecccceeeEEEecccCCEEEEcCCccceE
Confidence 4455555889999999999999999999999999998754 222333344679999999999999997754 899
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
-||++..... ..-...|-..+.+++++|| |+.+++|+.||.|++||.+++-|..++.. |..
T Consensus 333 lVweWqsEsY--------------VlKQQgH~~~i~~l~YSpD---gq~iaTG~eDgKVKvWn~~SgfC~vTFte--Hts 393 (893)
T KOG0291|consen 333 LVWEWQSESY--------------VLKQQGHSDRITSLAYSPD---GQLIATGAEDGKVKVWNTQSGFCFVTFTE--HTS 393 (893)
T ss_pred EEEEeeccce--------------eeeccccccceeeEEECCC---CcEEEeccCCCcEEEEeccCceEEEEecc--CCC
Confidence 9999974211 1112345667889999999 88999999999999999999999999987 899
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC-eEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN-EVSLW 1289 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg-~V~VW 1289 (1472)
.|+.++|+..|+.+++.+-||+|+.||+......+++..|....-.++.. .|.+. .+++|+.|. +|.||
T Consensus 394 ~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfscvav-D~sGe---------lV~AG~~d~F~IfvW 463 (893)
T KOG0291|consen 394 GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAV-DPSGE---------LVCAGAQDSFEIFVW 463 (893)
T ss_pred ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEE-cCCCC---------EEEeeccceEEEEEE
Confidence 99999999999999999999999999999999999999877655566666 55543 566666554 69999
Q ss_pred EcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEc
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1368 (1472)
Q Consensus 1290 Dl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTg 1368 (1472)
++++|+...++. +|.++|.+++|+|.| .|+||
T Consensus 464 S~qTGqllDiLs-----------------------------------------------GHEgPVs~l~f~~~~~~LaS~ 496 (893)
T KOG0291|consen 464 SVQTGQLLDILS-----------------------------------------------GHEGPVSGLSFSPDGSLLASG 496 (893)
T ss_pred EeecCeeeehhc-----------------------------------------------CCCCcceeeEEccccCeEEec
Confidence 999999887775 344579999999988 67799
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeE
Q 000470 1369 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1448 (1472)
Q Consensus 1369 g~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1448 (1472)
++|++||+||+-.... .+.. + .+..-+++
T Consensus 497 SWDkTVRiW~if~s~~--~vEt------------------------------------------------l-~i~sdvl~ 525 (893)
T KOG0291|consen 497 SWDKTVRIWDIFSSSG--TVET------------------------------------------------L-EIRSDVLA 525 (893)
T ss_pred cccceEEEEEeeccCc--eeee------------------------------------------------E-eeccceeE
Confidence 9999999999753211 0110 0 14556889
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000470 1449 LGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1449 va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++ |.|+|+-|+.+.-||.|.+|+
T Consensus 526 vs-frPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 526 VS-FRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred EE-EcCCCCeEEEEEecceEEEEE
Confidence 95 999999999999999999996
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=260.39 Aligned_cols=191 Identities=23% Similarity=0.257 Sum_probs=151.6
Q ss_pred CCCCCcceeeEEEEeCCe------EEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDKA------AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~------~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
+.||||+++++++..+.. .|+|+||+.++|.+++... .+++.++..++.||+.||+|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07851 71 MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI 149 (343)
T ss_pred ccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 479999999998876654 8999999999999998764 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.+...... .....++..|+|||.+.. ...++.++||||+||++|||+
T Consensus 150 ll~~~~~~kL~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 150 AVNEDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred EECCCCCEEEcccccccccccc----------ccCCcccccccCHHHHhC---------CCCCCchHhHHHHHHHHHHHH
Confidence 9999999999999998754211 122345778999997642 225688999999999999999
Q ss_pred hCCCCCCchHHHH----HHhcCCCC------------------------C---cccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHLLA----YRRGQYDP------------------------S---QHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~~~----~~~~~~~~------------------------~---~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||....... +......+ . .......++.+.+||.+||+.||++||
T Consensus 211 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 211 TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 9999986432211 11100000 0 011123467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
|+.|+++|
T Consensus 291 t~~ell~h 298 (343)
T cd07851 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=246.48 Aligned_cols=199 Identities=12% Similarity=0.045 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLSTP------PFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~~------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~ 67 (1472)
++||||+++++++...+ ..++++||+. |+|.+++... ..++...++.++.|++.||+|||++||+||
T Consensus 58 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~ 137 (273)
T cd05074 58 FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHR 137 (273)
T ss_pred CCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 58999999999886532 3478999998 7998887421 147899999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+||+++.++.++|+|||.++....... ........+++.|++||.+. ...++.++||||||
T Consensus 138 dikp~nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~sDi~slG 202 (273)
T cd05074 138 DLAARNCMLNENMTVCVADFGLSKKIYSGDY-----YRQGCASKLPVKWLALESLA----------DNVYTTHSDVWAFG 202 (273)
T ss_pred ccchhhEEEcCCCCEEECcccccccccCCcc-----eecCCCccCchhhcCHhHHh----------cCccchhhhhHHHH
Confidence 9999999999999999999998875532110 00111233456799999764 33567899999999
Q ss_pred HHHHHHHh-CCCCCCchHHHHHHhcC-CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 148 CVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 148 ~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
|++|||++ |.+||............ .......+...+..+.+++.+||+.+|++||++.|+++++..
T Consensus 203 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 203 VTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999999 78888654332221111 111111223445789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-23 Score=217.27 Aligned_cols=254 Identities=18% Similarity=0.249 Sum_probs=195.8
Q ss_pred eeeecc-ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1050 LVAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~-~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
++.+|. +|+.+|.+++|+|.|++||+||.|+++.||.-..++ +....+..+|...|.|++|+++|++||+|+.|.
T Consensus 52 ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 52 CKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE----FECVATLEGHENEVKCVAWSASGNYLATCSRDK 127 (312)
T ss_pred EEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCc----eeEEeeeeccccceeEEEEcCCCCEEEEeeCCC
Confidence 566665 599999999999999999999999999999866544 556778899999999999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCC---CCccceeec
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS---NSNTWTLKA 1205 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt---~~~~~~l~~ 1205 (1472)
+|.||.++. . ... .+......|-.-|..+.|+|. ..+|++++.|.+|++|+-.. ..+..++.+
T Consensus 128 SVWiWe~de-d---------dEf-ec~aVL~~HtqDVK~V~WHPt---~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g 193 (312)
T KOG0645|consen 128 SVWIWEIDE-D---------DEF-ECIAVLQEHTQDVKHVIWHPT---EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG 193 (312)
T ss_pred eEEEEEecC-C---------CcE-EEEeeeccccccccEEEEcCC---cceeEEeccCCeEEEEeecCCCCeeEEEEecC
Confidence 999999972 1 011 223334456666788889997 56999999999999998773 245666665
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|.+.|.+++|++.|..|++++.||++++|-++. .+..-+...+..+.++ ++ .|+++++|+.
T Consensus 194 --~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~v~W~--~~----------~IaS~ggD~~ 254 (312)
T KOG0645|consen 194 --HENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYDVPWD--NG----------VIASGGGDDA 254 (312)
T ss_pred --ccceEEEEEecCCCceEEEecCCcceEeeeecc-----CcchhcccceEeeeec--cc----------ceEeccCCCE
Confidence 888999999999999999999999999999873 3344455567777772 22 5899999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC--CC
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GG 1363 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p--~g 1363 (1472)
|+++.-..+- ..+. +.+ ..+....|...|+++.|.| .+
T Consensus 255 i~lf~~s~~~-----------d~p~-----~~l------------------------~~~~~~aHe~dVNsV~w~p~~~~ 294 (312)
T KOG0645|consen 255 IRLFKESDSP-----------DEPS-----WNL------------------------LAKKEGAHEVDVNSVQWNPKVSN 294 (312)
T ss_pred EEEEEecCCC-----------CCch-----HHH------------------------HHhhhcccccccceEEEcCCCCC
Confidence 9998754210 0000 000 0001133555799999999 45
Q ss_pred cEEEccCCCeEEEEeCC
Q 000470 1364 DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~ 1380 (1472)
.|++||.||.|++|.+.
T Consensus 295 ~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 295 RLASGGDDGIVNFWELE 311 (312)
T ss_pred ceeecCCCceEEEEEec
Confidence 89999999999999874
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-25 Score=236.44 Aligned_cols=194 Identities=15% Similarity=0.064 Sum_probs=151.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcH---HHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSL---RDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVL 75 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL---~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvH~DLKpeNIL 75 (1472)
++||||+||+..-.++..|+.||+|+-+| |.++. .+..++|.-.-.|....+.||+||-. .+|+|||+||+|||
T Consensus 121 ~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 121 NCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNIL 200 (361)
T ss_pred CCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheE
Confidence 58999999999999999999999999655 44443 24568999999999999999999996 69999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++..|.+||||||++..... ++....-.|...|||||++... +..|+-++|+||||++|||+.|
T Consensus 201 ldr~G~vKLCDFGIcGqLv~--------SiAkT~daGCrpYmAPERi~p~--------~~gyDiRSDvWSLGITL~EvAt 264 (361)
T KOG1006|consen 201 LDRHGDVKLCDFGICGQLVD--------SIAKTVDAGCRPYMAPERIDPS--------DKGYDIRSDVWSLGITLYEVAT 264 (361)
T ss_pred EecCCCEeeecccchHhHHH--------HHHhhhccCCccccChhccCCc--------cCCcchhhhhhhhcceEeeeec
Confidence 99999999999998765421 1122233466779999998632 3368899999999999999999
Q ss_pred CCCCCCc--hHHHHHHhcCCCCCcc--cCC---CCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 156 EVPFFEL--SHLLAYRRGQYDPSQH--LEK---IPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~pf~~--~~~~~~~~~~~~~~~~--l~~---~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|..||.. +.+..+........+. .+. ..+..++.+|.-||.+|-..||...+++++
T Consensus 265 G~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 265 GNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 9888853 2233333333322111 111 356789999999999999999999999976
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-25 Score=245.54 Aligned_cols=186 Identities=22% Similarity=0.353 Sum_probs=143.7
Q ss_pred cceeeEEEEeCCeEEEEecccCCcHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC----
Q 000470 6 CVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---- 79 (1472)
Q Consensus 6 Iv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~---- 79 (1472)
|+.+.++|+-.++.|||+|.++-+++|++..+.. ++...++.|++||++++++||+.+++|-||||||||+.+.
T Consensus 153 cv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred EEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence 6778889999999999999999999999998654 7889999999999999999999999999999999998532
Q ss_pred ----------------CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchH
Q 000470 80 ----------------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 80 ----------------~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
-.++|+|||.+...... -.+...|..|.|||+++ +-.++..+||
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----------hs~iVsTRHYRAPEViL----------gLGwS~pCDv 292 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----------HSTIVSTRHYRAPEVIL----------GLGWSQPCDV 292 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceeccC----------cceeeeccccCCchhee----------ccCcCCccCc
Confidence 24899999998743211 12334578899999987 4467889999
Q ss_pred HHHHHHHHHHHhCCCCCCchH----HHHHH---------------------hcCCCC---------------CcccC---
Q 000470 144 FAVGCVIAELFLEVPFFELSH----LLAYR---------------------RGQYDP---------------SQHLE--- 180 (1472)
Q Consensus 144 wSlG~il~eLltg~~pf~~~~----~~~~~---------------------~~~~~~---------------~~~l~--- 180 (1472)
||+||||+||++|..+|...+ +..+. ++..+. ...+.
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~ 372 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYM 372 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHh
Confidence 999999999999988884221 11110 011110 00000
Q ss_pred ---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 181 ---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 181 ---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
......+.|||++||.+||.+|+|+.|+|.|
T Consensus 373 ~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 373 LQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred ccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 0112367899999999999999999999988
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=254.31 Aligned_cols=191 Identities=20% Similarity=0.263 Sum_probs=150.4
Q ss_pred CCCCCcceeeEEEEe-CCeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-~~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||+++++++.. +...|+++||+.++|.+++...+ +++..+..++.||++||+|||++||+||||||.||+++..
T Consensus 66 l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~ 144 (328)
T cd07856 66 LRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN 144 (328)
T ss_pred cCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC
Confidence 579999999999876 56889999999999999887644 7889999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+...... .....++..|+|||.+.. ...++.++||||+||++|+|++|++|
T Consensus 145 ~~~~l~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~tg~~~ 205 (328)
T cd07856 145 CDLKICDFGLARIQDPQ----------MTGYVSTRYYRAPEIMLT---------WQKYDVEVDIWSAGCIFAEMLEGKPL 205 (328)
T ss_pred CCEEeCccccccccCCC----------cCCCcccccccCceeeec---------cCCcCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988643211 122345778999997642 23578899999999999999999999
Q ss_pred CCchHHHH---------------HH-------------hcC---CCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000470 160 FELSHLLA---------------YR-------------RGQ---YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 208 (1472)
Q Consensus 160 f~~~~~~~---------------~~-------------~~~---~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 208 (1472)
|....... .. ... ..+........++.++++|.+||+.+|++||+++++
T Consensus 206 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el 285 (328)
T cd07856 206 FPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA 285 (328)
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 96432110 00 000 000011112345789999999999999999999999
Q ss_pred HHH
Q 000470 209 LQN 211 (1472)
Q Consensus 209 L~~ 211 (1472)
+.|
T Consensus 286 l~~ 288 (328)
T cd07856 286 LAH 288 (328)
T ss_pred hcC
Confidence 988
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-22 Score=226.83 Aligned_cols=292 Identities=15% Similarity=0.202 Sum_probs=231.6
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC--
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-- 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D-- 1127 (1472)
.+-.+.||..+++-..+||.|.++|||...|+|||||+..-+.. -+.++..-.++|.++.|..+++.|++.++.
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hi----LKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHI----LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCccee----eeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 36778999999999999999999999999999999998764432 233455567889999999999999988753
Q ss_pred --CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1128 --GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1128 --G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
|.+.+||-.+. .|. ...|...+..++|-|..+- .+++|+.|++|.+|+=.--+-..++
T Consensus 127 rfg~~F~~DSG~S---vGe-------------i~GhSr~ins~~~KpsRPf--Ri~T~sdDn~v~ffeGPPFKFk~s~-- 186 (603)
T KOG0318|consen 127 RFGHVFLWDSGNS---VGE-------------ITGHSRRINSVDFKPSRPF--RIATGSDDNTVAFFEGPPFKFKSSF-- 186 (603)
T ss_pred ceeEEEEecCCCc---cce-------------eeccceeEeeeeccCCCce--EEEeccCCCeEEEeeCCCeeeeecc--
Confidence 44555655421 111 1245667889999998543 8999999999999974322222233
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEe--ccccCCceeEEeecCCCCCccccCCCCEEEEEEcC
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1283 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~--~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~d 1283 (1472)
..|...|+|+.|+|||..+++.++||.+.+||=.+++.+..+. .+|.+.|..+.| +|+.. .++++++|
T Consensus 187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsW-sPDs~---------~~~T~SaD 256 (603)
T KOG0318|consen 187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSW-SPDST---------QFLTVSAD 256 (603)
T ss_pred cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEE-CCCCc---------eEEEecCC
Confidence 3388899999999999999999999999999999999888776 357889999999 88776 89999999
Q ss_pred CeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC
Q 000470 1284 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1363 (1472)
Q Consensus 1284 g~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g 1363 (1472)
.+++|||+.+.++.+.+....... + .-..+.| +++
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~-------------------------------------------d-qqvG~lW-qkd 291 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVE-------------------------------------------D-QQVGCLW-QKD 291 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchh-------------------------------------------c-eEEEEEE-eCC
Confidence 999999999999988876322100 0 1224445 367
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCc
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1443 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1443 (1472)
.|+|.+.+|.|.+++...++...++.| |.
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~G---------------------------------------------------Hn 320 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISG---------------------------------------------------HN 320 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecc---------------------------------------------------cc
Confidence 899999999999999988876555554 99
Q ss_pred cceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1444 DSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1444 d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
..|++++ .++++.+|.|||.||.|.=|+
T Consensus 321 K~ITaLt-v~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 321 KSITALT-VSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred cceeEEE-EcCCCCEEEeeccCceEEEEe
Confidence 9999996 899999999999999999995
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=255.06 Aligned_cols=191 Identities=21% Similarity=0.215 Sum_probs=149.8
Q ss_pred CCCCCcceeeEEEEeC------CeEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~------~~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++... ...|++++++.++|.+++..+ .+++..++.++.||+.||+|||++||+||||||+||
T Consensus 73 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NI 151 (345)
T cd07877 73 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 151 (345)
T ss_pred cCCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHE
Confidence 5899999999988653 357999999989999888765 489999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||+++..... .....++..|+|||.+.. ...++.++||||+||++|||+
T Consensus 152 ll~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 152 AVNEDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred EEcCCCCEEEeccccccccccc----------ccccccCCCccCHHHHhC---------ccCCCchhhHHHHHHHHHHHH
Confidence 9999999999999988754211 122346788999997642 235678999999999999999
Q ss_pred hCCCCCCchHH----HHHHhcC------------------------CCCCc---ccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHL----LAYRRGQ------------------------YDPSQ---HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~----~~~~~~~------------------------~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|++||..... ..+.... ..+.. ......++.+++||.+||+.||.+||
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 292 (345)
T cd07877 213 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 292 (345)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC
Confidence 99999853321 1111100 00000 01113467899999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
++.++++|
T Consensus 293 t~~e~l~h 300 (345)
T cd07877 293 TAAQALAH 300 (345)
T ss_pred CHHHHhcC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-24 Score=255.50 Aligned_cols=191 Identities=23% Similarity=0.244 Sum_probs=150.6
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNI 74 (1472)
++||||+++++++..+. .+|+||||+.++|.+++... .+++..++.++.||+.||+|||++||+||||||+||
T Consensus 71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07880 71 MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL 149 (343)
T ss_pred cCCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 57999999999997654 46999999988999888754 589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHH
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 154 (1472)
+++.++.++|+|||.+...... .....+++.|+|||.+.. ...++.++|+||+||++|+|+
T Consensus 150 ll~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 150 AVNEDCELKILDFGLARQTDSE----------MTGYVVTRWYRAPEVILN---------WMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred EEcCCCCEEEeecccccccccC----------ccccccCCcccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999988754211 112345778999998742 124688999999999999999
Q ss_pred hCCCCCCchHH----HHHHhcCCC-----------------------C----CcccCCCCCHHHHHHHHHhcccCcCCCC
Q 000470 155 LEVPFFELSHL----LAYRRGQYD-----------------------P----SQHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~pf~~~~~----~~~~~~~~~-----------------------~----~~~l~~~~~~~l~~LI~~mL~~dP~~Rp 203 (1472)
+|.+||..... ..+...... . ...+....++.+.++|.+||+.||++||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 290 (343)
T cd07880 211 TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI 290 (343)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC
Confidence 99999964321 111110000 0 0011234566799999999999999999
Q ss_pred CHHHHHHH
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~elL~~ 211 (1472)
++.++++|
T Consensus 291 t~~~~l~~ 298 (343)
T cd07880 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99999987
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-23 Score=252.00 Aligned_cols=261 Identities=24% Similarity=0.396 Sum_probs=205.5
Q ss_pred Cccc-ccc--eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1043 GWRP-RGI--LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1043 ~W~p-~G~--lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
.|.. .+. +...+.+|...|++++|+||++++++|+.|+++||||+.... +...++.+|...|++++|+|.++
T Consensus 185 ~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-----~~~~~l~gH~~~v~~~~f~p~g~ 259 (456)
T KOG0266|consen 185 IWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-----RNLKTLKGHSTYVTSVAFSPDGN 259 (456)
T ss_pred EeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-----eEEEEecCCCCceEEEEecCCCC
Confidence 4654 344 778889999999999999999999999999999999994322 25567889999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC-
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS- 1198 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~- 1198 (1472)
.+++|+.|++|+|||+++ + ...+ ....|...+..++|+++ ++.|++++.||.|++||+.++.
T Consensus 260 ~i~Sgs~D~tvriWd~~~-----~--------~~~~-~l~~hs~~is~~~f~~d---~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 260 LLVSGSDDGTVRIWDVRT-----G--------ECVR-KLKGHSDGISGLAFSPD---GNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred EEEEecCCCcEEEEeccC-----C--------eEEE-eeeccCCceEEEEECCC---CCEEEEcCCCccEEEEECCCCce
Confidence 999999999999999984 1 1222 23345667888899999 7899999999999999999998
Q ss_pred -ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEE
Q 000470 1199 -NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1199 -~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l 1277 (1472)
+...+....+...+++++|+|++.++++++.|+.+++||++.+..+..+...... + .+++++.. ...+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~i 394 (456)
T KOG0266|consen 323 LCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL-V--RCIFSPTL-----STGGKLI 394 (456)
T ss_pred eeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc-c--eeEecccc-----cCCCCeE
Confidence 4555554222226999999999999999999999999999999988887764433 2 22223322 3457799
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCC-cCCceE
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPR-LLGIRS 1356 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V~s 1356 (1472)
++++.|+.|.+||..++..++.+. +| ...+..
T Consensus 395 ~sg~~d~~v~~~~~~s~~~~~~l~-----------------------------------------------~h~~~~~~~ 427 (456)
T KOG0266|consen 395 YSGSEDGSVYVWDSSSGGILQRLE-----------------------------------------------GHSKAAVSD 427 (456)
T ss_pred EEEeCCceEEEEeCCccchhhhhc-----------------------------------------------CCCCCceec
Confidence 999999999999999865544443 12 336788
Q ss_pred eccCCCC-cEEEcc--CCCeEEEEeCC
Q 000470 1357 LLPLPGG-DLLTGG--TDLKIRRWDHC 1380 (1472)
Q Consensus 1357 l~~~p~g-~llTgg--~Dg~IrlWDl~ 1380 (1472)
+.+++.. .+++++ .|+.|++|..+
T Consensus 428 ~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 428 LSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cccCCCcCeeeecCcCCCceEEEecCC
Confidence 8888877 455666 69999999743
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=216.81 Aligned_cols=282 Identities=17% Similarity=0.252 Sum_probs=227.2
Q ss_pred eccccccceeEEEEcC---CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISH---DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafsp---d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~ 1129 (1472)
+-+||+.+|-.++||| +|-||+|++.||.=-+-+-+++. -.-++.+|.+.|++.+...|...-|+++.|=+
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgd------wigtfeghkgavw~~~l~~na~~aasaaadft 82 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGD------WIGTFEGHKGAVWSATLNKNATRAASAAADFT 82 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCC------cEEeeeccCcceeeeecCchhhhhhhhcccch
Confidence 3468999999999986 88899999999987666655554 56689999999999999888888899999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc-ceeecCCC
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPE 1208 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~-~~l~~~~h 1208 (1472)
-+|||.-+.. ......|..+|..++|+.| .+.|++|+.+.-++++|+...+.. ..+. +|
T Consensus 83 akvw~a~tgd---------------elhsf~hkhivk~~af~~d---s~~lltgg~ekllrvfdln~p~App~E~~--gh 142 (334)
T KOG0278|consen 83 AKVWDAVTGD---------------ELHSFEHKHIVKAVAFSQD---SNYLLTGGQEKLLRVFDLNRPKAPPKEIS--GH 142 (334)
T ss_pred hhhhhhhhhh---------------hhhhhhhhheeeeEEeccc---chhhhccchHHHhhhhhccCCCCCchhhc--CC
Confidence 9999986311 1123457789999999998 679999999999999999876532 3333 48
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
.+.|..+.|....+.+++.+.|++|++||.|++..++++..+ .+++++.+ ++++. +++.+..+.|.+
T Consensus 143 tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~--s~VtSlEv-s~dG~----------ilTia~gssV~F 209 (334)
T KOG0278|consen 143 TGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFN--SPVTSLEV-SQDGR----------ILTIAYGSSVKF 209 (334)
T ss_pred CCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecC--CCCcceee-ccCCC----------EEEEecCceeEE
Confidence 999999999988888999999999999999999999999875 47888888 66553 556666778999
Q ss_pred EEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEE
Q 000470 1289 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLT 1367 (1472)
Q Consensus 1289 WDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llT 1367 (1472)
||..+...++.+... ..|.+...+|+. ++++
T Consensus 210 wdaksf~~lKs~k~P------------------------------------------------~nV~SASL~P~k~~fVa 241 (334)
T KOG0278|consen 210 WDAKSFGLLKSYKMP------------------------------------------------CNVESASLHPKKEFFVA 241 (334)
T ss_pred eccccccceeeccCc------------------------------------------------cccccccccCCCceEEe
Confidence 999887666555411 135555666654 8999
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcccee
Q 000470 1368 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1447 (1472)
||+|+.++.||..+++..-.. .++|.++|.
T Consensus 242 Gged~~~~kfDy~TgeEi~~~--------------------------------------------------nkgh~gpVh 271 (334)
T KOG0278|consen 242 GGEDFKVYKFDYNTGEEIGSY--------------------------------------------------NKGHFGPVH 271 (334)
T ss_pred cCcceEEEEEeccCCceeeec--------------------------------------------------ccCCCCceE
Confidence 999999999999887653211 135999999
Q ss_pred EEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1448 SLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1448 ~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+| .|+|+|..-+|||.||+|++|.
T Consensus 272 cV-rFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 272 CV-RFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred EE-EECCCCceeeccCCCceEEEEE
Confidence 99 5999999999999999999993
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-23 Score=216.18 Aligned_cols=290 Identities=16% Similarity=0.215 Sum_probs=214.8
Q ss_pred CCCCCCCccccccCCCCCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEe
Q 000470 1025 ADLTGLPSFVRTSSIPDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1103 (1472)
Q Consensus 1025 ~~~~g~~~~~~~~~~~~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~ 1103 (1472)
++.+|.-.|..++...+..|.. .|..+.++.||+++|+++..+.+.+.++|||.|.++++||+.+++. ..++.
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~------la~~k 91 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQ------LATWK 91 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcE------EEEee
Confidence 4445555555555567789995 8999999999999999999999999999999999999999999873 33444
Q ss_pred ccCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCce
Q 000470 1104 LEGSRALCTMMLRHSAQVVVGACD-----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASH 1178 (1472)
Q Consensus 1104 ~~~~~I~~v~f~~~~~~las~s~D-----G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~ 1178 (1472)
. +.+|..+.|+.+|+.++.++++ +.|.++|++.... ......+..+....+ ..++..-|.|- ++
T Consensus 92 ~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~------~~~s~ep~~kI~t~~-skit~a~Wg~l---~~ 160 (327)
T KOG0643|consen 92 T-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSS------DIDSEEPYLKIPTPD-SKITSALWGPL---GE 160 (327)
T ss_pred c-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChh------hhcccCceEEecCCc-cceeeeeeccc---CC
Confidence 3 3459999999999998887754 6799999983211 111122333333333 45566669987 77
Q ss_pred EEEEEeCCCeEEEEeCCCCCc-cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCcee
Q 000470 1179 MFMYSTQNCGIHLWDTRSNSN-TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEK 1257 (1472)
Q Consensus 1179 ~L~~at~dg~I~iwDlrt~~~-~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~ 1257 (1472)
.|++|..+|.|..||++++.. +..-+. |...|+.++++++..++++|+.|.+-++||.++...++++.- ..|+++
T Consensus 161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~--h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--e~PvN~ 236 (327)
T KOG0643|consen 161 TIIAGHEDGSISIYDARTGKELVDSDEE--HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--ERPVNT 236 (327)
T ss_pred EEEEecCCCcEEEEEcccCceeeechhh--hccccccccccCCcceEEecccCccceeeeccceeeEEEeee--cccccc
Confidence 999999999999999999854 333333 778999999999999999999999999999999999998874 457888
Q ss_pred EEeecCCCCCccccCCCCEEEEEEcCC--eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccc
Q 000470 1258 MCLFVPPPNAAVSTTARPLIYVAAGCN--EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV 1335 (1472)
Q Consensus 1258 l~~~~p~~~~~~~~~~~~~l~vas~dg--~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1335 (1472)
..+ .|... .++.|+|.. .|+.=+.+.|+--..|-
T Consensus 237 aai-sP~~d---------~VilgGGqeA~dVTTT~~r~GKFEArFy---------------------------------- 272 (327)
T KOG0643|consen 237 AAI-SPLLD---------HVILGGGQEAMDVTTTSTRAGKFEARFY---------------------------------- 272 (327)
T ss_pred eec-ccccc---------eEEecCCceeeeeeeecccccchhhhHH----------------------------------
Confidence 877 77654 566665542 23333322221100000
Q ss_pred cccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCC
Q 000470 1336 NQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1336 ~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
...-.+++....+|..+|++++++|+| .+.+||+||.||+.-++
T Consensus 273 -h~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 273 -HLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred -HHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 001124556668899999999999999 56699999999998654
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=229.31 Aligned_cols=264 Identities=18% Similarity=0.192 Sum_probs=208.8
Q ss_pred CCCCcccc-cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~p~-G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.-..|+-. -.++..|.||+|+|.|+.| |.+.++|||.|.||+|||+++++ ...++-+|...|..+.|+.
T Consensus 218 TikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge------~l~tlihHceaVLhlrf~n-- 287 (499)
T KOG0281|consen 218 TIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE------PLNTLIHHCEAVLHLRFSN-- 287 (499)
T ss_pred ceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCc------hhhHHhhhcceeEEEEEeC--
Confidence 45679854 5788999999999999999 56799999999999999999988 5667788888999999964
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..+++++.|.+|.|||+... ....++....+|.+.|+++.|+.. ++++++.|.+|++||+.+++
T Consensus 288 g~mvtcSkDrsiaVWdm~sp-----------s~it~rrVLvGHrAaVNvVdfd~k-----yIVsASgDRTikvW~~st~e 351 (499)
T KOG0281|consen 288 GYMVTCSKDRSIAVWDMASP-----------TDITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWSTSTCE 351 (499)
T ss_pred CEEEEecCCceeEEEeccCc-----------hHHHHHHHHhhhhhheeeeccccc-----eEEEecCCceEEEEecccee
Confidence 58999999999999999731 123456667788889999988754 99999999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++.+ |...|-|+.+. |+.+++|++|.+|++||+..|.+++.++. |..-|.++.| +.+.++
T Consensus 352 fvRtl~g--HkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLRvLeG-HEeLvRciRF------------d~krIV 414 (499)
T KOG0281|consen 352 FVRTLNG--HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF------------DNKRIV 414 (499)
T ss_pred eehhhhc--ccccceehhcc--CeEEEecCCCceEEEEeccccHHHHHHhc-hHHhhhheee------------cCceee
Confidence 9999977 88888888775 78999999999999999999999988774 6677888888 234689
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.||.|+|||+.++.-..... +..-+..+ ..|.+.|-.+-
T Consensus 415 SGaYDGkikvWdl~aaldpra~~-----------------------------------~~~Cl~~l---v~hsgRVFrLQ 456 (499)
T KOG0281|consen 415 SGAYDGKIKVWDLQAALDPRAPA-----------------------------------STLCLRTL---VEHSGRVFRLQ 456 (499)
T ss_pred eccccceEEEEecccccCCcccc-----------------------------------cchHHHhh---hhccceeEEEe
Confidence 99999999999998653211110 00000000 11233455555
Q ss_pred cCCCCcEEEccCCCeEEEEeCCCCCCc
Q 000470 1359 PLPGGDLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1359 ~~p~g~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
|. +-.+++++.|.+|-+||+.++-.+
T Consensus 457 FD-~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 457 FD-EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred ec-ceEEEeccCCCeEEEEEcCCCCcc
Confidence 52 237889999999999999877655
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-24 Score=246.11 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=151.5
Q ss_pred CCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCc
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~ 81 (1472)
.+=||++|..|+++..+|+||+|++ |++-.+|-+.+-+.|..+++++.+|.+|+++.|+.|+|||||||+|||||.+|+
T Consensus 688 n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH 767 (1034)
T KOG0608|consen 688 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH 767 (1034)
T ss_pred CcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc
Confidence 3568999999999999999999999 699999988888999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccCC--------CCCCCCCc---------------------------eeeccCCCCccccCcccccccC
Q 000470 82 LYLSDFASFKPTYIP--------YDDPSDFS---------------------------FFFDTGGKRLCYLAPERFYEHG 126 (1472)
Q Consensus 82 vkL~DFg~a~~~~~~--------~~~~~~~~---------------------------~~~~~~~gt~~Y~APE~~~~~~ 126 (1472)
+||+|||++...... .+-...-+ .......||+.|+|||++..
T Consensus 768 IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-- 845 (1034)
T KOG0608|consen 768 IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-- 845 (1034)
T ss_pred eeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--
Confidence 999999987533211 11000000 00113468999999998863
Q ss_pred CccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchHHHH--HHhcCCCCC--cccCCCCCHHHHHHHHHhcccCcCCC
Q 000470 127 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--YRRGQYDPS--QHLEKIPDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 127 ~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--~~~~~~~~~--~~l~~~~~~~l~~LI~~mL~~dP~~R 202 (1472)
..|+..+|.||.|+|||||+.|++||....... ++....... .......++++.+||.+++ .+++.|
T Consensus 846 --------~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~R 916 (1034)
T KOG0608|consen 846 --------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSR 916 (1034)
T ss_pred --------cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhh
Confidence 357888999999999999999999996443221 111111111 1122356788999999876 568888
Q ss_pred C---CHHHHHHH
Q 000470 203 F---SAESYLQN 211 (1472)
Q Consensus 203 p---sa~elL~~ 211 (1472)
. .++|+-.|
T Consensus 917 LGkng~d~vKaH 928 (1034)
T KOG0608|consen 917 LGKNGADQVKAH 928 (1034)
T ss_pred hcccchhhhhcC
Confidence 8 46667776
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-24 Score=263.45 Aligned_cols=185 Identities=21% Similarity=0.261 Sum_probs=138.8
Q ss_pred CeEEEEecccCC-cHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEecccccccc
Q 000470 17 KAAYLLRQYFFN-SLRDRLSTPPFL-SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 94 (1472)
Q Consensus 17 ~~~~lV~Ey~~g-sL~d~l~~~~~l-~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~ 94 (1472)
..+||-||||+. .|.+++..+.+. ...+.+.+++||++||.|+|++|||||||||.||++++.+.|||+|||+++...
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 468999999995 667777766654 478899999999999999999999999999999999999999999999987621
Q ss_pred ----------CCC-CCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCch
Q 000470 95 ----------IPY-DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS 163 (1472)
Q Consensus 95 ----------~~~-~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~ 163 (1472)
.+. ..............||.-|+|||++.... ...|+.|+|+||||+|++||+. ||.-+
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~-------~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts 818 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS-------SNKYNSKIDMYSLGIVLFEMLY---PFGTS 818 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc-------cccccchhhhHHHHHHHHHHhc---cCCch
Confidence 000 01111111234566899999999986432 2579999999999999999984 35422
Q ss_pred -----HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 164 -----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 164 -----~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.+..++.+..+....+....-+.-..+|++||+.||.+||||.|+|++
T Consensus 819 MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 819 MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 233344444443322333333456899999999999999999999987
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-24 Score=268.00 Aligned_cols=192 Identities=16% Similarity=0.212 Sum_probs=160.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
++|||||+++++.-+....+|++|||+ |+|..+|++. ..|+..+...++.||++|++||+++++|||||...
T Consensus 752 f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaR 831 (1025)
T KOG1095|consen 752 FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAAR 831 (1025)
T ss_pred CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhh
Confidence 589999999999999999999999999 7999999874 24899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCC--CCccccCcccccccCCccccccCCCCCccchHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 150 (1472)
|+|++....|||+|||+|+.++.. .+|..... -...|||||.|. +..++.|+||||||+++
T Consensus 832 NCLL~~~r~VKIaDFGlArDiy~~-------~yyr~~~~a~lPvkWm~PEsl~----------d~iFtskSDvWsFGVll 894 (1025)
T KOG1095|consen 832 NCLLDERRVVKIADFGLARDIYDK-------DYYRKHGEAMLPVKWMPPESLK----------DGIFTSKSDVWSFGVLL 894 (1025)
T ss_pred heeecccCcEEEcccchhHhhhhc-------hheeccCccccceecCCHHHHh----------hcccccccchhhhHHHH
Confidence 999999999999999999965422 12222222 235699999886 45899999999999999
Q ss_pred HHHHh-CCCCCCchHHHH----HHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 151 AELFL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 151 ~eLlt-g~~pf~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
||+|+ |.+||......+ +..+. .-..+..++..+.+++..||+.+|++||++..++++.
T Consensus 895 WEifslG~~PY~~~~n~~v~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 895 WEIFSLGATPYPSRSNFEVLLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred HHHHhCCCCCCCCcchHHHHHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 99999 589996544333 22332 3334566778899999999999999999999999863
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=238.20 Aligned_cols=270 Identities=17% Similarity=0.268 Sum_probs=220.7
Q ss_pred CCCCCcccc-cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC
Q 000470 1039 IPDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1039 ~~~~~W~p~-G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
..-..|+-+ |.|+..|.||.|+|..++|+|++.+||||++|-.||||+...- |+..+..+|-..|..+.|++.
T Consensus 31 G~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r------rclftL~GHlDYVRt~~FHhe 104 (1202)
T KOG0292|consen 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR------RCLFTLLGHLDYVRTVFFHHE 104 (1202)
T ss_pred ceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc------eehhhhccccceeEEeeccCC
Confidence 345689965 9999999999999999999999999999999999999998764 366677788889999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC
Q 000470 1118 SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1197 (1472)
Q Consensus 1118 ~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~ 1197 (1472)
--++++||+|.+|+||+..+ ..+.....+|..-|.|..|+|. ...+++|+-|-+|++||+..-
T Consensus 105 yPWIlSASDDQTIrIWNwqs--------------r~~iavltGHnHYVMcAqFhpt---EDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 105 YPWILSASDDQTIRIWNWQS--------------RKCIAVLTGHNHYVMCAQFHPT---EDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred CceEEEccCCCeEEEEeccC--------------CceEEEEecCceEEEeeccCCc---cceEEEecccceEEEEeecch
Confidence 99999999999999999973 1334455678888999999997 569999999999999998531
Q ss_pred Cc---------------------------cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEec-
Q 000470 1198 SN---------------------------TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY- 1249 (1472)
Q Consensus 1198 ~~---------------------------~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~- 1249 (1472)
+. +-+.-..+|...|+-++|+|.-..+++|+.|..|++|.+.- .+.|..
T Consensus 168 Rkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne---tKaWEvD 244 (1202)
T KOG0292|consen 168 RKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE---TKAWEVD 244 (1202)
T ss_pred hccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc---ccceeeh
Confidence 10 00111134778899999999999999999999999999863 345553
Q ss_pred ---cccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCC
Q 000470 1250 ---SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1326 (1472)
Q Consensus 1250 ---~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 1326 (1472)
+|...|.++.| ||... +|++.+.|+.|+|||+.+..++++|+..+.
T Consensus 245 tcrgH~nnVssvlf-hp~q~---------lIlSnsEDksirVwDm~kRt~v~tfrrend--------------------- 293 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLF-HPHQD---------LILSNSEDKSIRVWDMTKRTSVQTFRREND--------------------- 293 (1202)
T ss_pred hhhcccCCcceEEe-cCccc---------eeEecCCCccEEEEecccccceeeeeccCC---------------------
Confidence 46667888888 88765 889999999999999999999999973222
Q ss_pred CCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000470 1327 PKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGP 1391 (1472)
Q Consensus 1327 ~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~ 1391 (1472)
..+.++.+|...|+.+|.|+-+.+|.++.....+.+.|.
T Consensus 294 --------------------------RFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n 332 (1202)
T KOG0292|consen 294 --------------------------RFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGN 332 (1202)
T ss_pred --------------------------eEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCC
Confidence 367788888888888888888888888877777777664
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=236.93 Aligned_cols=281 Identities=21% Similarity=0.347 Sum_probs=227.4
Q ss_pred eccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEE
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1132 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~v 1132 (1472)
.+.||+..|.+++||.++..++||+. ++++||+..++. +..+... +.+.+.+|.|+++++++|...|.+.+
T Consensus 368 ~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k------ciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~v 438 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK------CIRTITC--GYILASKFVPGDRYIVLGTKNGELQV 438 (888)
T ss_pred eeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc------eeEEecc--ccEEEEEecCCCceEEEeccCCceEE
Confidence 45699999999999999888888766 689999999876 3344433 36999999999999999999999999
Q ss_pred EEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc-----c-------
Q 000470 1133 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN-----T------- 1200 (1472)
Q Consensus 1133 wdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~-----~------- 1200 (1472)
||+.... .+.. ...|...+..++..|+ +..+++|+.|.+|++||..-... .
T Consensus 439 fdlaS~~-------------l~Et-i~AHdgaIWsi~~~pD---~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~ 501 (888)
T KOG0306|consen 439 FDLASAS-------------LVET-IRAHDGAIWSISLSPD---NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKH 501 (888)
T ss_pred EEeehhh-------------hhhh-hhccccceeeeeecCC---CCceEEecCCcEEEEEeEEEEeccCcccceeeeecc
Confidence 9997311 1111 2256667888889998 77899999999999999863211 1
Q ss_pred -ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1201 -WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1201 -~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
.+++. ...|.|+.++|+|.+|++|=-|.++++|-+.+.+-.-++. +|.-||.++.. +|+.. ++++
T Consensus 502 ~rtLel---~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDI-S~DSk---------livT 567 (888)
T KOG0306|consen 502 TRTLEL---EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDI-SPDSK---------LIVT 567 (888)
T ss_pred ceEEec---cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEec-cCCcC---------eEEe
Confidence 22222 4679999999999999999999999999988776666655 47889999999 77765 8999
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
|+.|..|+||-+.=|.|.+.+-. |+-.|.++.|
T Consensus 568 gSADKnVKiWGLdFGDCHKS~fA-----------------------------------------------HdDSvm~V~F 600 (888)
T KOG0306|consen 568 GSADKNVKIWGLDFGDCHKSFFA-----------------------------------------------HDDSVMSVQF 600 (888)
T ss_pred ccCCCceEEeccccchhhhhhhc-----------------------------------------------ccCceeEEEE
Confidence 99999999999999999877653 3337899999
Q ss_pred CCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1438 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1438 (1472)
.|.. .+.|+|-|+.|+.||-..-+..+.
T Consensus 601 ~P~~~~FFt~gKD~kvKqWDg~kFe~iq~--------------------------------------------------- 629 (888)
T KOG0306|consen 601 LPKTHLFFTCGKDGKVKQWDGEKFEEIQK--------------------------------------------------- 629 (888)
T ss_pred cccceeEEEecCcceEEeechhhhhhhee---------------------------------------------------
Confidence 9977 677999999999999765544332
Q ss_pred CCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1439 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1439 ~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+.+|+.-|+++| ..++|.+++|+|+|-.|++|.
T Consensus 630 L~~H~~ev~cLa-v~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 630 LDGHHSEVWCLA-VSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred eccchheeeeeE-EcCCCCeEEeccCCceeEeee
Confidence 335999999997 889999999999999999994
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-24 Score=229.12 Aligned_cols=187 Identities=19% Similarity=0.247 Sum_probs=155.8
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~ 80 (1472)
|||.+|.++.+|+++..+++|.||++ |+|--.+..+..|+++.++++..+|+.||.|||++||+.||||.+|+|++..|
T Consensus 309 n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 309 NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC
Confidence 79999999999999999999999999 69888788777899999999999999999999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 160 (1472)
++||+|+|++|.-..+.+. ..+.|||+.|+|||++. +..|+..+|.|+||++++||+.|+.||
T Consensus 389 hikltdygmcke~l~~gd~-------tstfcgtpnyiapeilr----------geeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGPGDT-------TSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ceeecccchhhcCCCCCcc-------cccccCCCcccchhhhc----------ccccCceehHHHHHHHHHHHHcCCCCc
Confidence 9999999999876544442 35778999999999876 557899999999999999999999999
Q ss_pred Cch-------HHHHHH-hcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000470 161 ELS-------HLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 161 ~~~-------~~~~~~-~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa 205 (1472)
+.- +...|. +........++...+-.+..++...|.+||++|...
T Consensus 452 divgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc 504 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGC 504 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCC
Confidence 621 112221 111222223455556677889999999999999853
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=223.45 Aligned_cols=252 Identities=18% Similarity=0.225 Sum_probs=201.9
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEec-cCCceEEEEEecCCCEEEEEeCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~-~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
+++.++.+|..+|.-|.||||.+++++|+.|..+++||+.+++.. ..|.. ++..+.+++|+|+|..|++|+.|
T Consensus 260 kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~------~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 260 KLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLR------HLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred eeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhh------hhcccCcCCCcceeEEccCCceeEecCCC
Confidence 578999999999999999999999999999999999999999843 33332 35679999999999999999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
++|..||.+. +. ...+.......+..++..+| |..+++.+.|..|++++..+........
T Consensus 334 r~i~~wdlDg------n~--------~~~W~gvr~~~v~dlait~D---gk~vl~v~~d~~i~l~~~e~~~dr~lis--- 393 (519)
T KOG0293|consen 334 RTIIMWDLDG------NI--------LGNWEGVRDPKVHDLAITYD---GKYVLLVTVDKKIRLYNREARVDRGLIS--- 393 (519)
T ss_pred CcEEEecCCc------ch--------hhcccccccceeEEEEEcCC---CcEEEEEecccceeeechhhhhhhcccc---
Confidence 9999999982 11 12222333356788888998 7889999999999999998766654444
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc-cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V 1286 (1472)
.+.+|++++++.+|+++++-=.+..+++||+.....+..+.... ..-|-+-|| .. .+..++++|+.|+.|
T Consensus 394 e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF-gg--------~~~~fiaSGSED~kv 464 (519)
T KOG0293|consen 394 EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF-GG--------GNDKFIASGSEDSKV 464 (519)
T ss_pred ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc-CC--------CCcceEEecCCCceE
Confidence 36789999999999999999999999999999776666554322 223334444 21 123589999999999
Q ss_pred EEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--c
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--D 1364 (1472)
Q Consensus 1287 ~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~ 1364 (1472)
.||+..+|+.+.++. ||...|+|++|.|.. .
T Consensus 465 yIWhr~sgkll~~Ls-----------------------------------------------GHs~~vNcVswNP~~p~m 497 (519)
T KOG0293|consen 465 YIWHRISGKLLAVLS-----------------------------------------------GHSKTVNCVSWNPADPEM 497 (519)
T ss_pred EEEEccCCceeEeec-----------------------------------------------CCcceeeEEecCCCCHHH
Confidence 999999999888875 344479999999987 6
Q ss_pred EEEccCCCeEEEEeCCCC
Q 000470 1365 LLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~~~ 1382 (1472)
+++||+||+||+|.....
T Consensus 498 ~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 498 FASASDDGTIRIWGPSDN 515 (519)
T ss_pred hhccCCCCeEEEecCCcc
Confidence 889999999999987644
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=244.14 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=156.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+.||||+++++++.+ ...|||||+++ |.|..|+..++ .|+......+++||+.||.|||+.+.|||||...||||.+
T Consensus 448 fdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS 526 (974)
T KOG4257|consen 448 FDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS 526 (974)
T ss_pred CCCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC
Confidence 479999999999976 46899999999 99999998754 5899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCC-CCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG-KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~-gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
...|||+|||+++... +..+|..+.+ -..-|||||.+. -..++.++|||-||+++||++. |
T Consensus 527 p~CVKLaDFGLSR~~e-------d~~yYkaS~~kLPIKWmaPESIN----------fRrFTtASDVWMFgVCmWEIl~lG 589 (974)
T KOG4257|consen 527 PQCVKLADFGLSRYLE-------DDAYYKASRGKLPIKWMAPESIN----------FRRFTTASDVWMFGVCMWEILSLG 589 (974)
T ss_pred cceeeecccchhhhcc-------ccchhhccccccceeecCccccc----------hhcccchhhHHHHHHHHHHHHHhc
Confidence 9999999999998662 2233333322 244599999653 4578999999999999999876 6
Q ss_pred CCCCCc-hHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFEL-SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
..||.+ .+-.-+.+.+.......|+.+++.+..|+.+||.+||.+||.+.|+...+
T Consensus 590 vkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 590 VKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred CCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 555543 22222222222334456778889999999999999999999998887654
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-22 Score=208.66 Aligned_cols=283 Identities=19% Similarity=0.249 Sum_probs=210.0
Q ss_pred eeEEEEcC--CCCE-EEEEe-----CCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC-CCEEEEEeCCCcEE
Q 000470 1061 VNEIAISH--DHSF-FVSAS-----DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIH 1131 (1472)
Q Consensus 1061 V~~lafsp--d~~~-laSgS-----~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~s~DG~I~ 1131 (1472)
-.++.||| ++++ +||+. ..|++.|-|+.+..... ..+.|....+ ..+++|+++ .+.+++|+.||+++
T Consensus 11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~---e~~s~d~~D~-LfdV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ---ECQSYDTEDG-LFDVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred cceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE---EEEeeecccc-eeEeeecCCCcceEEEEecCceEE
Confidence 35788888 4443 33332 46889999987544322 3345555554 999999995 67888999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+||..... .++..+ .+|...|..+.|++.. +..++++++||+|++||...+.-+.++.+ |...
T Consensus 87 l~d~~~~s------------~Pi~~~-kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~ 149 (311)
T KOG0277|consen 87 LFDLTMPS------------KPIHKF-KEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSC 149 (311)
T ss_pred EeccCCCC------------cchhHH-HhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecC--CccE
Confidence 99965211 123333 3456667888888864 55888889999999999999988999887 8999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1212 VSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1212 Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
|....|+| .++.+++++.||++++||+|..-....+.. |...|.++.|..- +.+.+++|+.|+.|++||
T Consensus 150 Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw~ky---------~~~vl~Tg~vd~~vr~wD 219 (311)
T KOG0277|consen 150 IYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDWSKY---------NHNVLATGGVDNLVRGWD 219 (311)
T ss_pred EEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeeccccc---------CCcEEEecCCCceEEEEe
Confidence 99999999 679999999999999999997644444444 5567888877322 345889999999999999
Q ss_pred cCCCeEE-EEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--cEEE
Q 000470 1291 AENGSCH-QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLT 1367 (1472)
Q Consensus 1291 l~t~~~~-~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~llT 1367 (1472)
+++.... .+ ..+|.-.|+.+.|+|.. .|+|
T Consensus 220 ir~~r~pl~e-----------------------------------------------L~gh~~AVRkvk~Sph~~~lLaS 252 (311)
T KOG0277|consen 220 IRNLRTPLFE-----------------------------------------------LNGHGLAVRKVKFSPHHASLLAS 252 (311)
T ss_pred hhhcccccee-----------------------------------------------ecCCceEEEEEecCcchhhHhhh
Confidence 9875311 11 12455579999999976 6779
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcccee
Q 000470 1368 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1447 (1472)
Q Consensus 1368 gg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1447 (1472)
++-|.++|+||...+.... +...-|++-|-
T Consensus 253 asYDmT~riw~~~~~ds~~--------------------------------------------------e~~~~HtEFv~ 282 (311)
T KOG0277|consen 253 ASYDMTVRIWDPERQDSAI--------------------------------------------------ETVDHHTEFVC 282 (311)
T ss_pred ccccceEEecccccchhhh--------------------------------------------------hhhhccceEEe
Confidence 9999999999987554321 01112888898
Q ss_pred EEeeeec-CCcEEEEEcCCceEEEcC
Q 000470 1448 SLGSVKL-NQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1448 ~va~~~~-~~~~LvS~s~DG~IkVWk 1472 (1472)
.+ .|+. +...+++++.|+.++||+
T Consensus 283 g~-Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 283 GL-DWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cc-ccccccCceeeecccccceeeec
Confidence 88 4765 478899999999999995
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=222.41 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=204.3
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCE
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
..|+. .+.....+.+|...|..+.|+|+++++++++.||.|++||+.+.+ ....+..|...|.++.|.++++.
T Consensus 34 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~ 107 (289)
T cd00200 34 KVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE------CVRTLTGHTSYVSSVAFSPDGRI 107 (289)
T ss_pred EEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc------ceEEEeccCCcEEEEEEcCCCCE
Confidence 35764 456778889999999999999999999999999999999998754 33455567778999999999888
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
+++++.||.|++|++.... ...... .+...+..+.|+|+ +.++++++.+|.|++||+++++..
T Consensus 108 ~~~~~~~~~i~~~~~~~~~-------------~~~~~~-~~~~~i~~~~~~~~---~~~l~~~~~~~~i~i~d~~~~~~~ 170 (289)
T cd00200 108 LSSSSRDKTIKVWDVETGK-------------CLTTLR-GHTDWVNSVAFSPD---GTFVASSSQDGTIKLWDLRTGKCV 170 (289)
T ss_pred EEEecCCCeEEEEECCCcE-------------EEEEec-cCCCcEEEEEEcCc---CCEEEEEcCCCcEEEEEccccccc
Confidence 8888889999999997210 111112 34556888889997 568888888999999999988888
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEE
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~va 1280 (1472)
..+.. |.+.+++++|+|+++.+++|+.+|.|.+||++.+..+..+.. +..++..+.+ +|+. .+++++
T Consensus 171 ~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~~---------~~~~~~ 237 (289)
T cd00200 171 ATLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-HENGVNSVAF-SPDG---------YLLASG 237 (289)
T ss_pred eeEec--CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh-cCCceEEEEE-cCCC---------cEEEEE
Confidence 87775 777999999999999999999999999999998888777643 4557888888 6653 366666
Q ss_pred EcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC
Q 000470 1281 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360 (1472)
Q Consensus 1281 s~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~ 1360 (1472)
+.++.+.+||+.+++....+.. +...|.++.|+
T Consensus 238 ~~~~~i~i~~~~~~~~~~~~~~-----------------------------------------------~~~~i~~~~~~ 270 (289)
T cd00200 238 SEDGTIRVWDLRTGECVQTLSG-----------------------------------------------HTNSVTSLAWS 270 (289)
T ss_pred cCCCcEEEEEcCCceeEEEccc-----------------------------------------------cCCcEEEEEEC
Confidence 6699999999998776655541 12268899999
Q ss_pred CCC-cEEEccCCCeEEEEe
Q 000470 1361 PGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1361 p~g-~llTgg~Dg~IrlWD 1378 (1472)
+++ .+++++.|+.|++||
T Consensus 271 ~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 271 PDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCCEEEEecCCCeEEecC
Confidence 986 788999999999996
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-23 Score=266.03 Aligned_cols=91 Identities=23% Similarity=0.330 Sum_probs=86.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++||||++++.++......||||||+. ++|.+++...+.+++..++.|+.||+.||+|||.+||+||||||+|||++.+
T Consensus 61 l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~ 140 (669)
T cd05610 61 SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNE 140 (669)
T ss_pred cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCC
Confidence 579999999999999999999999998 6999999887789999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccc
Q 000470 80 NWLYLSDFASFK 91 (1472)
Q Consensus 80 ~~vkL~DFg~a~ 91 (1472)
+.++|+|||+++
T Consensus 141 g~vkL~DFGls~ 152 (669)
T cd05610 141 GHIKLTDFGLSK 152 (669)
T ss_pred CCEEEEeCCCCc
Confidence 999999999876
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-22 Score=236.24 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=203.2
Q ss_pred ccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEE
Q 000470 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1133 (1472)
Q Consensus 1054 l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vw 1133 (1472)
|+.-+..|-+++|+|....++|+=..|.|++||.+-+. ....|..|.++|..++|+|....|++||+|-.|+||
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 44456789999999999999999999999999997654 344677899999999999999999999999999999
Q ss_pred EccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceE
Q 000470 1134 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1213 (1472)
Q Consensus 1134 dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1213 (1472)
+... . .+.-....|-+-|..+.|++. -+++++++.|-+|++|+..+..++..+.+ |...|.
T Consensus 79 nYk~-r-------------rclftL~GHlDYVRt~~FHhe---yPWIlSASDDQTIrIWNwqsr~~iavltG--HnHYVM 139 (1202)
T KOG0292|consen 79 NYKT-R-------------RCLFTLLGHLDYVRTVFFHHE---YPWILSASDDQTIRIWNWQSRKCIAVLTG--HNHYVM 139 (1202)
T ss_pred eccc-c-------------eehhhhccccceeEEeeccCC---CceEEEccCCCeEEEEeccCCceEEEEec--CceEEE
Confidence 9873 1 111112355667788889998 77999999999999999999999999988 788999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCcc----------------------------cceEeccccCCceeEEeecCCC
Q 000470 1214 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----------------------------VNSWQYSQVCPIEKMCLFVPPP 1265 (1472)
Q Consensus 1214 sl~~sp~g~~LvsGssdG~I~lWDlr~~~~----------------------------i~s~~~~~~~~I~~l~~~~p~~ 1265 (1472)
|..|+|....+++||-|.+|++||+.-... ++-.-.+|..+|+-+.| ||.
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAf-hpT- 217 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAF-HPT- 217 (1202)
T ss_pred eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEe-cCC-
Confidence 999999999999999999999999743111 11122234445555555 553
Q ss_pred CCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccC
Q 000470 1266 NAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELN 1345 (1472)
Q Consensus 1266 ~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 1345 (1472)
-+++++|+.|..|++|.+...+ .|+..
T Consensus 218 --------lpliVSG~DDRqVKlWrmnetK---------------------------------------------aWEvD 244 (1202)
T KOG0292|consen 218 --------LPLIVSGADDRQVKLWRMNETK---------------------------------------------AWEVD 244 (1202)
T ss_pred --------cceEEecCCcceeeEEEecccc---------------------------------------------ceeeh
Confidence 3588889999999999976432 23344
Q ss_pred CCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1346 EPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1346 ~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
...+|...|.++.|+|.. .++|.|+|+.||+||+...+..+++
T Consensus 245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred hhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeee
Confidence 456788899999999965 7779999999999999887766544
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=215.20 Aligned_cols=255 Identities=15% Similarity=0.207 Sum_probs=199.9
Q ss_pred Ccc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEE
Q 000470 1043 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1043 ~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~l 1121 (1472)
.|+ .+|.....+.||+++|+++.||.||.++|||.-+|.|+||+..++. ....+......|.-+.|+|.++.|
T Consensus 90 lW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~------~~~~~~~e~~dieWl~WHp~a~il 163 (399)
T KOG0296|consen 90 LWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG------EQWKLDQEVEDIEWLKWHPRAHIL 163 (399)
T ss_pred EEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc------eEEEeecccCceEEEEecccccEE
Confidence 588 4688999999999999999999999999999999999999999866 233333344558889999999999
Q ss_pred EEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccc
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1122 as~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~ 1201 (1472)
++|+.||++.+|.+... ...+....++..+++=.|.|+ |+.++++..||+|++||+.+++...
T Consensus 164 lAG~~DGsvWmw~ip~~--------------~~~kv~~Gh~~~ct~G~f~pd---GKr~~tgy~dgti~~Wn~ktg~p~~ 226 (399)
T KOG0296|consen 164 LAGSTDGSVWMWQIPSQ--------------ALCKVMSGHNSPCTCGEFIPD---GKRILTGYDDGTIIVWNPKTGQPLH 226 (399)
T ss_pred EeecCCCcEEEEECCCc--------------ceeeEecCCCCCcccccccCC---CceEEEEecCceEEEEecCCCceeE
Confidence 99999999999999731 122333356777788889999 8899999999999999999998776
Q ss_pred eeecCC-------------------------------------------------CccceEEEEEcCCC---CEEEEEeC
Q 000470 1202 TLKAIP-------------------------------------------------EEGYVSSLVTGPCG---NWFVSGSS 1229 (1472)
Q Consensus 1202 ~l~~~~-------------------------------------------------h~g~Itsl~~sp~g---~~LvsGss 1229 (1472)
++.... +...+.|+.+.|.. ...++|+-
T Consensus 227 ~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v 306 (399)
T KOG0296|consen 227 KITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV 306 (399)
T ss_pred EecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc
Confidence 665210 00112233333322 35678888
Q ss_pred CCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCC
Q 000470 1230 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1309 (1472)
Q Consensus 1230 dG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~ 1309 (1472)
||+|.+||+......+...+ ..+|.++.| .+. +++++++.+|.|+.||.++|+++.++.
T Consensus 307 dG~i~iyD~a~~~~R~~c~h--e~~V~~l~w-~~t----------~~l~t~c~~g~v~~wDaRtG~l~~~y~-------- 365 (399)
T KOG0296|consen 307 DGTIAIYDLAASTLRHICEH--EDGVTKLKW-LNT----------DYLLTACANGKVRQWDARTGQLKFTYT-------- 365 (399)
T ss_pred cceEEEEecccchhheeccC--CCceEEEEE-cCc----------chheeeccCceEEeeeccccceEEEEe--------
Confidence 99999999887777666554 456888888 442 368999999999999999999988886
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCC
Q 000470 1310 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1310 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
+|..+|.+++.+|++ +++|+|.|++.++|+..
T Consensus 366 ---------------------------------------GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 366 ---------------------------------------GHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ---------------------------------------cCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 344479999999998 67799999999999864
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=226.39 Aligned_cols=289 Identities=13% Similarity=0.199 Sum_probs=230.1
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
..+..|.+.|+.+.|-++...|+||+.|..|++|++.... .....++.+..+.|+++.|.++++++++++.|+.++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR 244 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch----hhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence 3467799999999999998999999999999999987543 112334556667899999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccc
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1211 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1211 (1472)
+|+++.. ..+.....|...|+++.|.-. ...+++|+.|.+|+.||+....|..++-. ...
T Consensus 245 ~Wnvd~~--------------r~~~TLsGHtdkVt~ak~~~~---~~~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~ 304 (459)
T KOG0288|consen 245 LWNVDSL--------------RLRHTLSGHTDKVTAAKFKLS---HSRVVSGSADRTIKLWDLQKAYCSKTVLP---GSQ 304 (459)
T ss_pred eeeccch--------------hhhhhhcccccceeeehhhcc---ccceeeccccchhhhhhhhhhheeccccc---ccc
Confidence 9999831 112222346777888888765 23599999999999999999888776543 345
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000470 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1291 (1472)
Q Consensus 1212 Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl 1291 (1472)
+..++.. +..+++|-.|+.|++||.|...+..+...+ +.|+++.. .+++ ..+.+.+-|+.+.+.|+
T Consensus 305 cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~l-s~~g---------~~lLsssRDdtl~viDl 370 (459)
T KOG0288|consen 305 CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLG--GRVTSLDL-SMDG---------LELLSSSRDDTLKVIDL 370 (459)
T ss_pred ccceEec--ceeeeecccccceEEEeccCCceeeEeecC--cceeeEee-ccCC---------eEEeeecCCCceeeeec
Confidence 6666665 567899999999999999999888876653 47888887 5544 36788888999999999
Q ss_pred CCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccC
Q 000470 1292 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGT 1370 (1472)
Q Consensus 1292 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~ 1370 (1472)
++.+.+++++..... .++ -.+.+.|+|++ ++++||.
T Consensus 371 Rt~eI~~~~sA~g~k-----------------------------------------~as--DwtrvvfSpd~~YvaAGS~ 407 (459)
T KOG0288|consen 371 RTKEIRQTFSAEGFK-----------------------------------------CAS--DWTRVVFSPDGSYVAAGSA 407 (459)
T ss_pred ccccEEEEeeccccc-----------------------------------------ccc--ccceeEECCCCceeeeccC
Confidence 999998888754331 112 26788899999 6779999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcc-ceeEE
Q 000470 1371 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD-SILSL 1449 (1472)
Q Consensus 1371 Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d-~I~~v 1449 (1472)
||.|++|++.+++.-.+++++ |.+ .|+++
T Consensus 408 dgsv~iW~v~tgKlE~~l~~s--------------------------------------------------~s~~aI~s~ 437 (459)
T KOG0288|consen 408 DGSVYIWSVFTGKLEKVLSLS--------------------------------------------------TSNAAITSL 437 (459)
T ss_pred CCcEEEEEccCceEEEEeccC--------------------------------------------------CCCcceEEE
Confidence 999999999998887766653 223 79999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000470 1450 GSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+ |++.|..|+++|+++.+.+|.
T Consensus 438 ~-W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 438 S-WNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred E-EcCCCchhhcccCCcceEecC
Confidence 5 999999999999999999995
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=241.38 Aligned_cols=199 Identities=15% Similarity=0.114 Sum_probs=158.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|+||||+.+.+++..++.+++|+|||+ |+|.+++... +.+.......|+.||+.|++||.+.++|||||.+.|+|++
T Consensus 592 LkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~ 671 (807)
T KOG1094|consen 592 LKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD 671 (807)
T ss_pred cCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec
Confidence 689999999999999999999999999 9999999886 4445666778999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh--
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-- 155 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-- 155 (1472)
.++++||+|||+++..+... +-..-....-...|||||.+. .++++.++|+|++|+++||+++
T Consensus 672 ~e~~iKiadfgmsR~lysg~-----yy~vqgr~vlpiRwmawEsil----------lgkFttaSDvWafgvTlwE~~~~C 736 (807)
T KOG1094|consen 672 GEFTIKIADFGMSRNLYSGD-----YYRVQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEVFMLC 736 (807)
T ss_pred CcccEEecCcccccccccCC-----ceeeecceeeeeeehhHHHHH----------hccccchhhhhhhHHHHHHHHHHH
Confidence 99999999999998765432 111112222356799999876 4578999999999999999976
Q ss_pred CCCCCCchHHH---HHHhcCCC-----CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 156 EVPFFELSHLL---AYRRGQYD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 156 g~~pf~~~~~~---~~~~~~~~-----~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.+.||..-.-. +....... .....|..++..+.+|+.+||.+|-++||+++++..++..
T Consensus 737 ~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 737 REQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred hhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 36777532222 21111111 1223566788899999999999999999999999887543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-23 Score=231.27 Aligned_cols=193 Identities=26% Similarity=0.297 Sum_probs=156.6
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
++|+||+++++++..+...++++||+++ +|.+++.....++...+..++.|++.++.+||+.||+|+||+|.||+++.+
T Consensus 44 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~ 123 (244)
T smart00220 44 LKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED 123 (244)
T ss_pred CCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC
Confidence 4799999999999999999999999995 999999876668999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.++|+|||.+....... ......++..|++||.+. ...++.++||||+|+++++|++|.+|
T Consensus 124 ~~~~l~d~~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~p 185 (244)
T smart00220 124 GHVKLADFGLARQLDPGG--------LLTTFVGTPEYMAPEVLL----------GKGYGKAVDVWSLGVILYELLTGKPP 185 (244)
T ss_pred CcEEEccccceeeecccc--------ccccccCCcCCCCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999999887653221 122344677899999764 33567899999999999999999888
Q ss_pred CCc-hHHHHHHhcCCCCCc---ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 160 FEL-SHLLAYRRGQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~-~~~~~~~~~~~~~~~---~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.. ............... ......+..+.+++.+||..+|++||++.++++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 186 FPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 865 333222221111111 1111155789999999999999999999999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-24 Score=230.68 Aligned_cols=196 Identities=26% Similarity=0.344 Sum_probs=153.0
Q ss_pred CCCCCcceeeEEEEeCC-----eEEEEecccCCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~-----~~~lV~Ey~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNIL 75 (1472)
.+|.||+...++.+-.. .+|+++|.|..+|...|-....|+...++.+++||++||+|||+.||.||||||.|+|
T Consensus 109 FkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLL 188 (449)
T KOG0664|consen 109 FRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLL 188 (449)
T ss_pred hccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEE
Confidence 37999999988886653 5799999999999999988888999999999999999999999999999999999999
Q ss_pred EccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 155 (1472)
++++..+||||||+++.....+ ...+....-|-.|.|||++++. ..|+.+.||||.|||+.||+.
T Consensus 189 VNSNCvLKICDFGLARvee~d~------~~hMTqEVVTQYYRAPEiLMGa---------RhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 189 VNSNCILKICDFGLARTWDQRD------RLNMTHEVVTQYYRAPELLMGA---------RRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred eccCceEEecccccccccchhh------hhhhHHHHHHHHhccHHHhhcc---------hhhcCccceehhhHHHHHHHh
Confidence 9999999999999998653221 1122333447789999998743 478999999999999999998
Q ss_pred CCCCCCchH----H------------HHH------------HhcCCCCC-cccCCC-----CCHHHHHHHHHhcccCcCC
Q 000470 156 EVPFFELSH----L------------LAY------------RRGQYDPS-QHLEKI-----PDSGIRKMILHMIQLEPEL 201 (1472)
Q Consensus 156 g~~pf~~~~----~------------~~~------------~~~~~~~~-~~l~~~-----~~~~l~~LI~~mL~~dP~~ 201 (1472)
.+..|.... + +.+ +.+...+. +.+-.+ ...+...++.+||..||++
T Consensus 254 RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dk 333 (449)
T KOG0664|consen 254 RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDK 333 (449)
T ss_pred hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcc
Confidence 888885321 1 111 11111111 111111 2246778999999999999
Q ss_pred CCCHHHHHHH
Q 000470 202 RFSAESYLQN 211 (1472)
Q Consensus 202 Rpsa~elL~~ 211 (1472)
|.+.++++.|
T Consensus 334 ris~~~A~~~ 343 (449)
T KOG0664|consen 334 RISVEEALQH 343 (449)
T ss_pred cccHhhhccc
Confidence 9999999988
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-22 Score=216.94 Aligned_cols=275 Identities=19% Similarity=0.224 Sum_probs=209.1
Q ss_pred CCCCcccccceeeeccccccceeEEEEcCCC---CEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec
Q 000470 1040 PDSGWRPRGILVAHLQEHCSAVNEIAISHDH---SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1116 (1472)
Q Consensus 1040 ~~~~W~p~G~lV~~l~~H~~~V~~lafspd~---~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~ 1116 (1472)
....|+..|+....+.||.++|.++++.-.. ..|+|||.|.++++|-+..++..... .....+|...|-++...+
T Consensus 126 ~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~--~~~~~GHk~~V~sVsv~~ 203 (423)
T KOG0313|consen 126 TSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKA--LKVCRGHKRSVDSVSVDS 203 (423)
T ss_pred eeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhH--HhHhcccccceeEEEecC
Confidence 4467999999999999999999998874322 36999999999999999877643322 222338999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccccc-CC----------CccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeC
Q 000470 1117 HSAQVVVGACDGIIHMFSVDHISR-GL----------GNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ 1185 (1472)
Q Consensus 1117 ~~~~las~s~DG~I~vwdv~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~ 1185 (1472)
++..|++|+.|.+|.+|+...... .. ....+..+..........|..+|..+.|++. ..++++++
T Consensus 204 sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~----~v~yS~Sw 279 (423)
T KOG0313|consen 204 SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA----TVIYSVSW 279 (423)
T ss_pred CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC----CceEeecc
Confidence 999999999999999999431100 00 0001111111122233456778888888874 28999999
Q ss_pred CCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcc--cceEeccccCCceeEEeecC
Q 000470 1186 NCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP--VNSWQYSQVCPIEKMCLFVP 1263 (1472)
Q Consensus 1186 dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~--i~s~~~~~~~~I~~l~~~~p 1263 (1472)
|.+|+.||+.++++..++.. ...++|+.++|..+.|++|++|..++|||.|.+.- +..--.+|...|..+.+ +|
T Consensus 280 DHTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkw-sp 355 (423)
T KOG0313|consen 280 DHTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKW-SP 355 (423)
T ss_pred cceEEEEEeecccceeeeec---CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheec-CC
Confidence 99999999999999988875 56799999999999999999999999999997632 22222246678889888 77
Q ss_pred CCCCccccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccccc
Q 000470 1264 PPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVD 1342 (1472)
Q Consensus 1264 ~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 1342 (1472)
... ..+++++.||.+++||+++.+ .+..+.
T Consensus 356 ~~~--------~~~~S~S~D~t~klWDvRS~k~plydI~----------------------------------------- 386 (423)
T KOG0313|consen 356 TNE--------FQLVSGSYDNTVKLWDVRSTKAPLYDIA----------------------------------------- 386 (423)
T ss_pred CCc--------eEEEEEecCCeEEEEEeccCCCcceeec-----------------------------------------
Confidence 643 478899999999999998754 333332
Q ss_pred ccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeC
Q 000470 1343 ELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1343 ~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl 1379 (1472)
+|.-.|-++.|...+.++|||.|++||++.-
T Consensus 387 ------~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 387 ------GHNDKVLSVDWNEGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred ------cCCceEEEEeccCCceEEeccCcceEEEecc
Confidence 2333689999988779999999999999864
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=258.79 Aligned_cols=278 Identities=14% Similarity=0.158 Sum_probs=202.4
Q ss_pred CCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeec
Q 000470 1079 DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD 1158 (1472)
Q Consensus 1079 DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1472)
+|-+++|+..+.......+ ......|.+.|.+++|+++++.+|+|+.||.|+||+...... .+....+ ....
T Consensus 457 ~gl~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~-~~~~~~~----~~~~-- 528 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLK-QGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK-DGRDIHY----PVVE-- 528 (793)
T ss_pred hhhhhhhcccceEEEEeec-cccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccc-ccccccc----ceEE--
Confidence 5778888887654221111 112344778899999999999999999999999999863110 0000000 0111
Q ss_pred CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcC-CCCEEEEEeCCCcEEEEE
Q 000470 1159 TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWD 1237 (1472)
Q Consensus 1159 ~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp-~g~~LvsGssdG~I~lWD 1237 (1472)
......+..++|++.. +..|++++.||.|++||+.+++.+..+.. |.+.|++++|+| ++.+|++|+.||.|++||
T Consensus 529 ~~~~~~v~~l~~~~~~--~~~las~~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 529 LASRSKLSGICWNSYI--KSQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred ecccCceeeEEeccCC--CCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 1223456777888753 45899999999999999999888877765 889999999997 789999999999999999
Q ss_pred CCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeE-EEEEecccCCCCCccCCCcc
Q 000470 1238 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC-HQVLRTANYDGDTEMSDLPW 1316 (1472)
Q Consensus 1238 lr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~-~~~l~~~~~~~~~~~~~~~~ 1316 (1472)
++.+..+..+.. ...+.++.| .+. ++.++++|+.|+.|.+||++++.. ...+
T Consensus 605 ~~~~~~~~~~~~--~~~v~~v~~-~~~--------~g~~latgs~dg~I~iwD~~~~~~~~~~~---------------- 657 (793)
T PLN00181 605 INQGVSIGTIKT--KANICCVQF-PSE--------SGRSLAFGSADHKVYYYDLRNPKLPLCTM---------------- 657 (793)
T ss_pred CCCCcEEEEEec--CCCeEEEEE-eCC--------CCCEEEEEeCCCeEEEEECCCCCccceEe----------------
Confidence 999888877764 346777777 332 245899999999999999986542 2221
Q ss_pred cccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCC
Q 000470 1317 AFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGV 1396 (1472)
Q Consensus 1317 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~ 1396 (1472)
.+|...|.++.|.+++.++||+.|+.|++||+..+.. +.. .
T Consensus 658 -------------------------------~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~-----~~~--~- 698 (793)
T PLN00181 658 -------------------------------IGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS-----GIN--E- 698 (793)
T ss_pred -------------------------------cCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc-----ccC--C-
Confidence 1344478899997666899999999999999875321 000 0
Q ss_pred CCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1397 GNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1397 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
. ....+.+|...|+.++ +++++.+|++|+.||.|+||+
T Consensus 699 --~-----------------------------------~l~~~~gh~~~i~~v~-~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 699 --T-----------------------------------PLHSFMGHTNVKNFVG-LSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred --c-----------------------------------ceEEEcCCCCCeeEEE-EcCCCCEEEEEeCCCEEEEEE
Confidence 0 0011235888999995 899999999999999999995
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=211.90 Aligned_cols=261 Identities=17% Similarity=0.248 Sum_probs=203.3
Q ss_pred CCCCcc-cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1040 PDSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1040 ~~~~W~-p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
.|.+.+ .+|..|.+|.||+++|++.....+...-|||+.|=+.||||.-++... .++ .|..-|.+++|+.++
T Consensus 40 ~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdel------hsf-~hkhivk~~af~~ds 112 (334)
T KOG0278|consen 40 KPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDEL------HSF-EHKHIVKAVAFSQDS 112 (334)
T ss_pred CchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhh------hhh-hhhheeeeEEecccc
Confidence 344444 468899999999999999999888889999999999999999887632 222 355568999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.|++|+.+..+||||++.... +...+..+.+.+-..+.++.+ +.+++++.|++|++||.|+|.
T Consensus 113 ~~lltgg~ekllrvfdln~p~A------------pp~E~~ghtg~Ir~v~wc~eD----~~iLSSadd~tVRLWD~rTgt 176 (334)
T KOG0278|consen 113 NYLLTGGQEKLLRVFDLNRPKA------------PPKEISGHTGGIRTVLWCHED----KCILSSADDKTVRLWDHRTGT 176 (334)
T ss_pred hhhhccchHHHhhhhhccCCCC------------CchhhcCCCCcceeEEEeccC----ceEEeeccCCceEEEEeccCc
Confidence 9999999999999999973211 122233344555455544444 467777999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++.. ...|+++.++++|++|.++ ..+.|..||......++++..|. .|.+..+ +|... .++
T Consensus 177 ~v~sL~~---~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~--nV~SASL-~P~k~---------~fV 240 (334)
T KOG0278|consen 177 EVQSLEF---NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC--NVESASL-HPKKE---------FFV 240 (334)
T ss_pred EEEEEec---CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc--ccccccc-cCCCc---------eEE
Confidence 9999986 5679999999999887665 45679999999999999888754 4666666 77654 567
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.|..+..||..+|.-+..+. .+|..+|.|+.
T Consensus 241 aGged~~~~kfDy~TgeEi~~~n----------------------------------------------kgh~gpVhcVr 274 (334)
T KOG0278|consen 241 AGGEDFKVYKFDYNTGEEIGSYN----------------------------------------------KGHFGPVHCVR 274 (334)
T ss_pred ecCcceEEEEEeccCCceeeecc----------------------------------------------cCCCCceEEEE
Confidence 77778999999999987654431 35666899999
Q ss_pred cCCCC-cEEEccCCCeEEEEeCCCCCCc
Q 000470 1359 PLPGG-DLLTGGTDLKIRRWDHCSPGRS 1385 (1472)
Q Consensus 1359 ~~p~g-~llTgg~Dg~IrlWDl~~~~~s 1385 (1472)
|+|+| ..++|++||+||+|-+.-++..
T Consensus 275 FSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 275 FSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred ECCCCceeeccCCCceEEEEEecCCCch
Confidence 99999 5669999999999998655443
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=240.36 Aligned_cols=287 Identities=19% Similarity=0.279 Sum_probs=228.2
Q ss_pred CCcccccce-eeeccc-cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceE-EeccCCceEEEEEecCC
Q 000470 1042 SGWRPRGIL-VAHLQE-HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLT-YHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p~G~l-V~~l~~-H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t-~~~~~~~I~~v~f~~~~ 1118 (1472)
..|++.... ...+.+ |...|++..|. ..++++++.|+++++||...+. ...+ +.+|.+.|.+++|...+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~------~i~~~l~GH~g~V~~l~~~~~~ 261 (537)
T KOG0274|consen 190 KNWRKLFRRGYKVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGY------LILTRLVGHFGGVWGLAFPSGG 261 (537)
T ss_pred ccccccccccceeecccCcchhhhheee--cCeEEecCCCceeEEeecccce------EEEeeccCCCCCceeEEEecCC
Confidence 456644332 233444 45678888887 5689999999999999998765 3334 78999999999999989
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.+++|+.|.+++|||..+ | .+......|...+.++...+. .+++|+.|.+|++||+.++.
T Consensus 262 ~~lvsgS~D~t~rvWd~~s-----g---------~C~~~l~gh~stv~~~~~~~~-----~~~sgs~D~tVkVW~v~n~~ 322 (537)
T KOG0274|consen 262 DKLVSGSTDKTERVWDCST-----G---------ECTHSLQGHTSSVRCLTIDPF-----LLVSGSRDNTVKVWDVTNGA 322 (537)
T ss_pred CEEEEEecCCcEEeEecCC-----C---------cEEEEecCCCceEEEEEccCc-----eEeeccCCceEEEEeccCcc
Confidence 9999999999999999763 1 222333356677777766554 88889999999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
++.++.+ |.+.|+++.++ +..+++|+.||+|++||.+.+++++++.. |..+|.++.+ .+. ..++
T Consensus 323 ~l~l~~~--h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~-~~~----------~~~~ 386 (537)
T KOG0274|consen 323 CLNLLRG--HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIV-DSE----------NRLL 386 (537)
T ss_pred eEEEecc--ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-CcceEEEEEe-cCc----------ceEE
Confidence 9998887 89999999998 88999999999999999999999999987 8889999866 321 3789
Q ss_pred EEEcCCeEEEEEcCCC-eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEe
Q 000470 1279 VAAGCNEVSLWNAENG-SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
.|+.|+.|++||++++ +|..++..+.. .|.++
T Consensus 387 Sgs~D~~IkvWdl~~~~~c~~tl~~h~~-----------------------------------------------~v~~l 419 (537)
T KOG0274|consen 387 SGSLDTTIKVWDLRTKRKCIHTLQGHTS-----------------------------------------------LVSSL 419 (537)
T ss_pred eeeeccceEeecCCchhhhhhhhcCCcc-----------------------------------------------ccccc
Confidence 9999999999999999 88887763221 23333
Q ss_pred ccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcC
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1358 ~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1437 (1472)
.+ .+..|++++.|+.|++||..+++..+++.++
T Consensus 420 ~~-~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~---------------------------------------------- 452 (537)
T KOG0274|consen 420 LL-RDNFLVSSSADGTIKLWDAEEGECLRTLEGR---------------------------------------------- 452 (537)
T ss_pred cc-ccceeEeccccccEEEeecccCceeeeeccC----------------------------------------------
Confidence 33 2447889999999999999998887766542
Q ss_pred CCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1438 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|...|++++ +. ...++++++||.+++|+
T Consensus 453 ----~~~~v~~l~-~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 453 ----HVGGVSALA-LG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ----CcccEEEee-cC--cceEEEEecCCeeEEEe
Confidence 556777775 22 57899999999999996
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-22 Score=223.40 Aligned_cols=276 Identities=20% Similarity=0.314 Sum_probs=206.9
Q ss_pred ccceeEEEEcCCCC--EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1058 CSAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1058 ~~~V~~lafspd~~--~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.++|++++|||... +.+|+|. .|.|++..+.+. ..++..-...+.+++|..+|..+|+|...|.|+|||.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~------~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~ 97 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSV------RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDM 97 (487)
T ss_pred cCcceeEecCCCCCCceEEeccc--EEEEEecchhhh------hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecc
Confidence 46799999999654 5555554 699999887552 2222222345999999999999999999999999996
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.+ ..+......|..++....|+|.. +.++++|+.|+.+++||+.+......+. .|.+.|.|.
T Consensus 98 k~--------------r~iLR~~~ah~apv~~~~f~~~d--~t~l~s~sDd~v~k~~d~s~a~v~~~l~--~htDYVR~g 159 (487)
T KOG0310|consen 98 KS--------------RVILRQLYAHQAPVHVTKFSPQD--NTMLVSGSDDKVVKYWDLSTAYVQAELS--GHTDYVRCG 159 (487)
T ss_pred cc--------------HHHHHHHhhccCceeEEEecccC--CeEEEecCCCceEEEEEcCCcEEEEEec--CCcceeEee
Confidence 42 01222233577889999999985 5689999999999999999887533444 599999999
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000470 1216 VTGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1216 ~~sp~-g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~ 1294 (1472)
+|+|. ++.+++|+.||.|++||+|... -......|..||..+++ .|.+. .|+ .++.+.|+|||+-+|
T Consensus 160 ~~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pVe~vl~-lpsgs---------~ia-sAgGn~vkVWDl~~G 227 (487)
T KOG0310|consen 160 DISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPVESVLA-LPSGS---------LIA-SAGGNSVKVWDLTTG 227 (487)
T ss_pred ccccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCceeeEEE-cCCCC---------EEE-EcCCCeEEEEEecCC
Confidence 99994 5689999999999999999884 33444556779999999 77654 444 445667999999866
Q ss_pred eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCe
Q 000470 1295 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1373 (1472)
Q Consensus 1295 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~ 1373 (1472)
...-.. ...|...|+|+.+..++ .|+|||-||.
T Consensus 228 ~qll~~----------------------------------------------~~~H~KtVTcL~l~s~~~rLlS~sLD~~ 261 (487)
T KOG0310|consen 228 GQLLTS----------------------------------------------MFNHNKTVTCLRLASDSTRLLSGSLDRH 261 (487)
T ss_pred ceehhh----------------------------------------------hhcccceEEEEEeecCCceEeecccccc
Confidence 321111 12355689999998777 8999999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee
Q 000470 1374 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1453 (1472)
Q Consensus 1374 IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1453 (1472)
|++||+.+-+ ++.+-. -.++|.+++ ++
T Consensus 262 VKVfd~t~~K---vv~s~~-------------------------------------------------~~~pvLsia-vs 288 (487)
T KOG0310|consen 262 VKVFDTTNYK---VVHSWK-------------------------------------------------YPGPVLSIA-VS 288 (487)
T ss_pred eEEEEccceE---EEEeee-------------------------------------------------cccceeeEE-ec
Confidence 9999965432 222211 346899996 78
Q ss_pred cCCcEEEEEcCCceEEE
Q 000470 1454 LNQRLLISSSRDGAIKV 1470 (1472)
Q Consensus 1454 ~~~~~LvS~s~DG~IkV 1470 (1472)
+++..++.|-.||.+-+
T Consensus 289 ~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 289 PDDQTVVIGMSNGLVSI 305 (487)
T ss_pred CCCceEEEecccceeee
Confidence 88889999999998754
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-21 Score=203.63 Aligned_cols=284 Identities=19% Similarity=0.236 Sum_probs=225.0
Q ss_pred eeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec-CCCEEEEEeCCCcE
Q 000470 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGII 1130 (1472)
Q Consensus 1052 ~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~I 1130 (1472)
+.+++|.+.|.+|+|+.+|..+++||.|++|++|++.... ......+.+|++.|-.++|.| +.+.|++++.|.+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh----hhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 5678999999999999999999999999999999998763 334567788998899999987 68899999999999
Q ss_pred EEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCcc
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
++||++..+ ++...... +.-+. +.|+|+ +++++++..|..|...|.|+.+.....+. .-
T Consensus 90 r~wd~r~~k-------------~~~~i~~~-~eni~-i~wsp~---g~~~~~~~kdD~it~id~r~~~~~~~~~~---~~ 148 (313)
T KOG1407|consen 90 RIWDIRSGK-------------CTARIETK-GENIN-ITWSPD---GEYIAVGNKDDRITFIDARTYKIVNEEQF---KF 148 (313)
T ss_pred EEEEeccCc-------------EEEEeecc-CcceE-EEEcCC---CCEEEEecCcccEEEEEecccceeehhcc---cc
Confidence 999998411 12222222 22233 358888 78999999999999999999887766554 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWD 1290 (1472)
.++-++|+-+++.++..+.-|+|.+-.....+++.+++. |.....++.| .|. |+++++|+.|..+.+||
T Consensus 149 e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-H~snCicI~f-~p~---------GryfA~GsADAlvSLWD 217 (313)
T KOG1407|consen 149 EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-HPSNCICIEF-DPD---------GRYFATGSADALVSLWD 217 (313)
T ss_pred eeeeeeecCCCCEEEEecCCceEEEEecccccccccccc-CCcceEEEEE-CCC---------CceEeeccccceeeccC
Confidence 577889998888888878889999999888888888875 4444444555 554 56999999999999999
Q ss_pred cCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEcc
Q 000470 1291 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGG 1369 (1472)
Q Consensus 1291 l~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg 1369 (1472)
++..-|.+.+.... -+|+.+.|+.+| .|++|+
T Consensus 218 ~~ELiC~R~isRld-----------------------------------------------wpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 218 VDELICERCISRLD-----------------------------------------------WPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred hhHhhhheeecccc-----------------------------------------------CceEEEEeccCcceeeccC
Confidence 99998888875222 279999999999 566999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEE
Q 000470 1370 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1449 (1472)
Q Consensus 1370 ~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1449 (1472)
+|.-|-+=+++++.+..-+. |.++-..|
T Consensus 251 EDh~IDIA~vetGd~~~eI~----------------------------------------------------~~~~t~tV 278 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP----------------------------------------------------CEGPTFTV 278 (313)
T ss_pred ccceEEeEecccCCeEEEee----------------------------------------------------ccCCceeE
Confidence 99999999998887654332 56667788
Q ss_pred eeeecCCcEEEEEcCC---------ceEEEc
Q 000470 1450 GSVKLNQRLLISSSRD---------GAIKVW 1471 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~D---------G~IkVW 1471 (1472)
| |+|...+|+-+..| |+||+|
T Consensus 279 A-WHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 279 A-WHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred E-ecCCCceeeEEecCCCCccccccceeEEe
Confidence 6 99999998877654 688876
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=249.25 Aligned_cols=199 Identities=19% Similarity=0.117 Sum_probs=163.6
Q ss_pred CCCCCcceeeEEEEe-----CCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~-----~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
..|||++.||++|.. ++.+|||||||. |+.-|+++. ...+.|+.+..|++.++.|+.+||...++|||||-.
T Consensus 73 ~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~ 152 (953)
T KOG0587|consen 73 SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQ 152 (953)
T ss_pred cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCc
Confidence 369999999999854 358999999999 799998875 456899999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHH
Q 000470 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 73 NILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 152 (1472)
|||++.++.|||+|||.+....... .-..|+.||++|||||++.+.. .....|+..+|+||||++..|
T Consensus 153 NiLLT~e~~VKLvDFGvSaQldsT~-------grRnT~iGtP~WMAPEViac~e-----~~d~tyd~R~D~WsLGITaIE 220 (953)
T KOG0587|consen 153 NVLLTENAEVKLVDFGVSAQLDSTV-------GRRNTFIGTPYWMAPEVIACDE-----SPDATYDYRSDLWSLGITAIE 220 (953)
T ss_pred eEEEeccCcEEEeeeeeeeeeeccc-------ccccCcCCCcccccceeeeccc-----CCCCCcccccchhhccceeeh
Confidence 9999999999999999876553221 1235778999999999997442 346678999999999999999
Q ss_pred HHhCCCCCC-chHHHHHHhcCCCCCccc--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 153 LFLEVPFFE-LSHLLAYRRGQYDPSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 Lltg~~pf~-~~~~~~~~~~~~~~~~~l--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
|.-|.||+- ......+......|++.+ ++..++.+.++|..||.+|-++||+..++|+|
T Consensus 221 ladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 221 MAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 999977764 444444444444444433 34557889999999999999999999999988
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=209.80 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=194.4
Q ss_pred cceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCc
Q 000470 1098 SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1177 (1472)
Q Consensus 1098 ~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~ 1177 (1472)
+.....+|.+.|..+.|+|+|.+||+||.|..|.+|++. +..+.+..+ ..|...|..++|.++ +
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~------gdceN~~~l-------kgHsgAVM~l~~~~d---~ 102 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVY------GDCENFWVL-------KGHSGAVMELHGMRD---G 102 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecc------ccccceeee-------ccccceeEeeeeccC---C
Confidence 344567889999999999999999999999999999986 222222221 256777888899999 6
Q ss_pred eEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcccceEeccccCCce
Q 000470 1178 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIE 1256 (1472)
Q Consensus 1178 ~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g-~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~ 1256 (1472)
+.+++++.|.+|++||+++|++++.++. |.+.+++++...-| ..+.+|+.||+++|||+|.+.+++.+.. ...++
T Consensus 103 s~i~S~gtDk~v~~wD~~tG~~~rk~k~--h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~--kyqlt 178 (338)
T KOG0265|consen 103 SHILSCGTDKTVRGWDAETGKRIRKHKG--HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN--KYQLT 178 (338)
T ss_pred CEEEEecCCceEEEEecccceeeehhcc--ccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc--ceeEE
Confidence 7999999999999999999999998887 89999999855555 4667899999999999999999988753 33577
Q ss_pred eEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccc
Q 000470 1257 KMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVN 1336 (1472)
Q Consensus 1257 ~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1336 (1472)
.+.| ... +..+++|+-|+.|++||++..++..+++.+
T Consensus 179 Av~f-~d~---------s~qv~sggIdn~ikvWd~r~~d~~~~lsGh--------------------------------- 215 (338)
T KOG0265|consen 179 AVGF-KDT---------SDQVISGGIDNDIKVWDLRKNDGLYTLSGH--------------------------------- 215 (338)
T ss_pred EEEe-ccc---------ccceeeccccCceeeeccccCcceEEeecc---------------------------------
Confidence 7777 322 336899999999999999999988887633
Q ss_pred ccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCCCC----ceEEeCCCCCCCCCCcceEEeecCceE
Q 000470 1337 QKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGR----SYCICGPNLKGVGNDEFYETRSSSGVQ 1411 (1472)
Q Consensus 1337 ~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~----s~vv~g~~~~~~~~~~~~~~~~~~~~~ 1411 (1472)
.-.|+.+..++.| ++++-+.|.++|+||++---. ..+..|.
T Consensus 216 --------------~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~-------------------- 261 (338)
T KOG0265|consen 216 --------------ADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGH-------------------- 261 (338)
T ss_pred --------------cCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecc--------------------
Confidence 2368899999988 788999999999999863211 1111111
Q ss_pred EEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEe-eeecCCcEEEEEcCCceEEEcC
Q 000470 1412 VVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG-SVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1412 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va-~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
-|.-.++-+. .|++++..+..|+.|..+.||+
T Consensus 262 -----------------------------~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd 294 (338)
T KOG0265|consen 262 -----------------------------IHNFEKNLLKCSWSPNGTKITAGSADRFVYVWD 294 (338)
T ss_pred -----------------------------hhhhhhhcceeeccCCCCccccccccceEEEee
Confidence 0333333321 3788999999999999999996
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-24 Score=243.60 Aligned_cols=189 Identities=28% Similarity=0.404 Sum_probs=148.4
Q ss_pred CCcceeeEEEEeCCeEEEEecccCCcHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-
Q 000470 4 TPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW- 79 (1472)
Q Consensus 4 pNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~- 79 (1472)
.||++|+..|...+++|||+|-+.-+|.+.|++-+ .|....++.++.||+-||..|-..||+|.||||+||||+..
T Consensus 494 ~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 494 FHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK 573 (752)
T ss_pred hHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence 58999999999999999999999999999998743 48889999999999999999999999999999999999865
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
+.+||||||.|...... +.+-|+ -+..|.|||+++ +.+|+...|+||+||+||||+||+..
T Consensus 574 ~iLKLCDfGSA~~~~en-----eitPYL----VSRFYRaPEIiL----------G~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN-----EITPYL----VSRFYRAPEIIL----------GLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ceeeeccCccccccccc-----cccHHH----HHHhccCcceee----------cCcccCCccceeeceeeEEeecccee
Confidence 57999999998765322 222222 245699999987 55788899999999999999999999
Q ss_pred CCchH---HHH-------------HHhcCCC-------------------------------CCcc----cCC---CC--
Q 000470 160 FELSH---LLA-------------YRRGQYD-------------------------------PSQH----LEK---IP-- 183 (1472)
Q Consensus 160 f~~~~---~~~-------------~~~~~~~-------------------------------~~~~----l~~---~~-- 183 (1472)
|.+.. +.. ++++.+. |... +.. .+
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 96432 111 1111111 0000 000 00
Q ss_pred ----CHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 184 ----DSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 184 ----~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
-..+++|+.+||..||++|.+..|+|.|
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 1368899999999999999999999998
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=256.15 Aligned_cols=192 Identities=18% Similarity=0.260 Sum_probs=133.2
Q ss_pred EeCCeEEEEecccC-CcHHHHHhCCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000470 14 ETDKAAYLLRQYFF-NSLRDRLSTPPF--------------------LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72 (1472)
Q Consensus 14 ~~~~~~~lV~Ey~~-gsL~d~l~~~~~--------------------l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpe 72 (1472)
..+...|+|+||++ ++|++++..+.. ..+..++.++.||+.||.|||++||+||||||+
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~ 284 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence 35568999999999 699999875431 123446789999999999999999999999999
Q ss_pred CEEEcc-CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc------------cccCCCCCc
Q 000470 73 NVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ------------VAQDAPLKP 139 (1472)
Q Consensus 73 NILv~~-~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~------------~~~~~~~t~ 139 (1472)
|||++. .+.+||+|||+++...... .+......+++.|+|||.+........ ......++.
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred HEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999986 5789999999987542211 112234567889999997753321100 001124567
Q ss_pred cchHHHHHHHHHHHHhCCCCCCchHHHH---HHhcCCC---------C--Cc------ccCCCCCHHHHHHHHHhcccCc
Q 000470 140 SMDIFAVGCVIAELFLEVPFFELSHLLA---YRRGQYD---------P--SQ------HLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 140 ~~DIwSlG~il~eLltg~~pf~~~~~~~---~~~~~~~---------~--~~------~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
++||||+||++|||+++..+++...... +....+. . .. ......+...++||.+||++||
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 7899999999999999765554322111 1111110 0 00 0111223356699999999999
Q ss_pred CCCCCHHHHHHH
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~Rpsa~elL~~ 211 (1472)
++|||+.|+|+|
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999999
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-23 Score=213.09 Aligned_cols=197 Identities=21% Similarity=0.392 Sum_probs=148.8
Q ss_pred CCCCcceeeEEEEeC--CeEEEEecccCC-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 2 SSTPCVHKKFWQETD--KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~--~~~~lV~Ey~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
+||||++++++..+. +..-||+||+.. +...+. +.|+.-+++.+++||+.||.|||++||.|||+||.|++++.
T Consensus 91 gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh 167 (338)
T KOG0668|consen 91 GGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH 167 (338)
T ss_pred CCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech
Confidence 699999999999764 567899999994 555544 34889999999999999999999999999999999999997
Q ss_pred CC-cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC-
Q 000470 79 WN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 79 ~~-~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg- 156 (1472)
.. .++|+|+|++.... |.. + ......+..|-.||.+... ..|+.+-|+|||||+++.|+..
T Consensus 168 ~~rkLrlIDWGLAEFYH-p~~---e----YnVRVASRyfKGPELLVdy---------~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 168 ELRKLRLIDWGLAEFYH-PGK---E----YNVRVASRYFKGPELLVDY---------QMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred hhceeeeeecchHhhcC-CCc---e----eeeeeehhhcCCchheeec---------hhccccHHHHHHHHHHHHHHhcc
Confidence 65 69999999987552 211 1 2334456779999988632 3678899999999999999998
Q ss_pred CCCCCc----hHHH------------HHHh---cCCCC----------C--------cccCCCCCHHHHHHHHHhcccCc
Q 000470 157 VPFFEL----SHLL------------AYRR---GQYDP----------S--------QHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 157 ~~pf~~----~~~~------------~~~~---~~~~~----------~--------~~l~~~~~~~l~~LI~~mL~~dP 199 (1472)
.|+|.+ .++. .|.. ...++ . ..-....++++.||+.++|..|-
T Consensus 231 epFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDH 310 (338)
T KOG0668|consen 231 EPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDH 310 (338)
T ss_pred CcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcc
Confidence 566642 2221 1111 00000 0 00112346789999999999999
Q ss_pred CCCCCHHHHHHHhhcccCCCCCChhh
Q 000470 200 ELRFSAESYLQNYAAVVFPTYFSPFL 225 (1472)
Q Consensus 200 ~~Rpsa~elL~~~~~~~fp~~f~~~l 225 (1472)
.+|+||.|++.| +||++..
T Consensus 311 qeRlTakEam~H-------pyF~~~~ 329 (338)
T KOG0668|consen 311 QERLTAKEAMAH-------PYFAPVR 329 (338)
T ss_pred ccccchHHHhcC-------chHHHHH
Confidence 999999999999 6776643
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-23 Score=247.10 Aligned_cols=197 Identities=16% Similarity=0.182 Sum_probs=166.1
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
..||||+++.++....+...||.|||+ |+|..+|+.+ +.++..+...+++-|+.|++||-++|+|||||...||||++
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS 766 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc
Confidence 379999999999999999999999999 8999999874 66999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCC--CccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK--RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 155 (1472)
+-..|++|||+++.. ++++. ....+.+| ...|.|||.+. ..++|.++||||+|+++||.++
T Consensus 767 nLvCKVsDFGLSRvl---edd~~---~~ytt~GGKIPiRWTAPEAIa----------~RKFTsASDVWSyGIVmWEVmSy 830 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVL---EDDPE---AAYTTLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSY 830 (996)
T ss_pred ceEEEeccccceeec---ccCCC---ccccccCCccceeecChhHhh----------hcccCchhhccccceEEEEeccc
Confidence 999999999999855 22221 12234444 45699999775 4578999999999999999875
Q ss_pred C-CCCCCchHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 156 E-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g-~~pf~~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
| +|.|+.++..-++..+......-|-.++..+.+|+..||++|-.+||.+.|++..|.
T Consensus 831 GERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 831 GERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred CCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 6 788888877666655544443345567789999999999999999999999998854
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=233.92 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=159.3
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
++|||+|++++++..+-.+|||+|||. |+|.|||+. +..++......++-||..|++||..+++|||||...|.||.
T Consensus 320 ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg 399 (1157)
T KOG4278|consen 320 IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 399 (1157)
T ss_pred hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 589999999999999999999999999 999999986 44588888999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-C
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 156 (1472)
++..||++|||+++..... .+... ....-..-|.|||-+. ...++.++|||+||++|||+.| |
T Consensus 400 EnhiVKvADFGLsRlMtgD-----TYTAH-AGAKFPIKWTAPEsLA----------yNtFSiKSDVWAFGVLLWEIATYG 463 (1157)
T KOG4278|consen 400 ENHIVKVADFGLSRLMTGD-----TYTAH-AGAKFPIKWTAPESLA----------YNTFSIKSDVWAFGVLLWEIATYG 463 (1157)
T ss_pred ccceEEeeccchhhhhcCC-----ceecc-cCccCcccccCccccc----------ccccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999865211 11100 0111145599999764 3467889999999999999988 5
Q ss_pred CCCCC---chHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHh
Q 000470 157 VPFFE---LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~pf~---~~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 212 (1472)
-.||. .++...+....|.-. -+..+++.+.+|++.||++.|.+||++.|+-+.+
T Consensus 464 MsPYPGidlSqVY~LLEkgyRM~--~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqaf 520 (1157)
T KOG4278|consen 464 MSPYPGIDLSQVYGLLEKGYRMD--GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAF 520 (1157)
T ss_pred CCCCCCccHHHHHHHHhcccccc--CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHH
Confidence 66764 556666655555533 4567788999999999999999999999998764
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=237.47 Aligned_cols=257 Identities=22% Similarity=0.347 Sum_probs=211.0
Q ss_pred CCccc-ccceeee-ccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1042 SGWRP-RGILVAH-LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~-l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
..|+. .|..+.. |.||.+.|.++++...+.++++||.|.|++|||+.+++ +..++.+|.+.|.++.. ...
T Consensus 231 ~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~------C~~~l~gh~stv~~~~~--~~~ 302 (537)
T KOG0274|consen 231 HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE------CTHSLQGHTSSVRCLTI--DPF 302 (537)
T ss_pred EEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc------EEEEecCCCceEEEEEc--cCc
Confidence 46884 6888888 99999999999997767899999999999999999988 56677788888888765 445
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++|+.|.+|+||++.+. ........|..+|.++.++.+ ++++|+.||+|.+||++++++
T Consensus 303 ~~~sgs~D~tVkVW~v~n~--------------~~l~l~~~h~~~V~~v~~~~~-----~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNG--------------ACLNLLRGHTGPVNCVQLDEP-----LLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred eEeeccCCceEEEEeccCc--------------ceEEEeccccccEEEEEecCC-----EEEEEecCceEEEEEhhhcee
Confidence 7888999999999999831 122223337888888877743 999999999999999999999
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~-~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
+.++.+ |.+.|+++.++.. ..+++|+.|++|++||++++ .++..+.. +..-+..+.+ .+..++
T Consensus 364 l~sl~g--H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~-h~~~v~~l~~------------~~~~Lv 427 (537)
T KOG0274|consen 364 LKSLSG--HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQG-HTSLVSSLLL------------RDNFLV 427 (537)
T ss_pred eeeecC--CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcC-Cccccccccc------------ccceeE
Confidence 999988 9999999999876 89999999999999999999 88888776 3334444433 245788
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+++.|+.|++||.++++|++++... +..+|.+++
T Consensus 428 s~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------~~~~v~~l~ 461 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------HVGGVSALA 461 (537)
T ss_pred eccccccEEEeecccCceeeeeccC----------------------------------------------CcccEEEee
Confidence 9999999999999999999998632 112566666
Q ss_pred cCCCCcEEEccCCCeEEEEeCCCCCCceEE
Q 000470 1359 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1359 ~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv 1388 (1472)
+. ...+++++.||.+++||+.+++..+.+
T Consensus 462 ~~-~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 462 LG-KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cC-cceEEEEecCCeeEEEecccCchhhhh
Confidence 64 457899999999999999988776644
|
|
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-20 Score=200.34 Aligned_cols=259 Identities=18% Similarity=0.244 Sum_probs=202.4
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeC--CC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC--DG 1128 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~--DG 1128 (1472)
.+.|.+-.+.|+++.|+++|.++++++.|.+++|+|+.++. ...+...+.-.+..++|....+.++.++. |.
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~------~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK------QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDD 80 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc------eeeEeecccccccEEEEecCCceEEEccCCCCC
Confidence 35566777899999999999999999999999999999876 33344455555889999988888888776 88
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+||..++.+. ...++..+|...|..+..+|. +..+++++.|++|++||+|..++...+..
T Consensus 81 tIryLsl~dN--------------kylRYF~GH~~~V~sL~~sP~---~d~FlS~S~D~tvrLWDlR~~~cqg~l~~--- 140 (311)
T KOG1446|consen 81 TIRYLSLHDN--------------KYLRYFPGHKKRVNSLSVSPK---DDTFLSSSLDKTVRLWDLRVKKCQGLLNL--- 140 (311)
T ss_pred ceEEEEeecC--------------ceEEEcCCCCceEEEEEecCC---CCeEEecccCCeEEeeEecCCCCceEEec---
Confidence 9999998741 234566678889999999998 67999999999999999999888776654
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCC--CcccceEecc--ccCCceeEEeecCCCCCccccCCCCEEEEEEcCC
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF--LVPVNSWQYS--QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1284 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~--~~~i~s~~~~--~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg 1284 (1472)
..-...+|||+|-.+++|...+.|+|||+|. +.+..++... .....+.+.| +|+ |+.+++++..+
T Consensus 141 -~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~F-S~d---------GK~iLlsT~~s 209 (311)
T KOG1446|consen 141 -SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEF-SPD---------GKSILLSTNAS 209 (311)
T ss_pred -CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEE-cCC---------CCEEEEEeCCC
Confidence 3345689999999999999888999999995 3455555543 2345666666 555 55899999999
Q ss_pred eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-
Q 000470 1285 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1363 (1472)
Q Consensus 1285 ~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g- 1363 (1472)
.+.+.|.-+|..++.+....... .. . -+..|.|++
T Consensus 210 ~~~~lDAf~G~~~~tfs~~~~~~------------------------------------------~~-~-~~a~ftPds~ 245 (311)
T KOG1446|consen 210 FIYLLDAFDGTVKSTFSGYPNAG------------------------------------------NL-P-LSATFTPDSK 245 (311)
T ss_pred cEEEEEccCCcEeeeEeeccCCC------------------------------------------Cc-c-eeEEECCCCc
Confidence 99999999999887776432210 00 1 355677999
Q ss_pred cEEEccCCCeEEEEeCCCCCCceEEeC
Q 000470 1364 DLLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1364 ~llTgg~Dg~IrlWDl~~~~~s~vv~g 1390 (1472)
++++|+.||+|.+|+++++.......|
T Consensus 246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 246 FVLSGSDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred EEEEecCCCcEEEEEcCCCcEeeEecC
Confidence 667999999999999988877655554
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=226.88 Aligned_cols=243 Identities=15% Similarity=0.301 Sum_probs=200.8
Q ss_pred EeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEE
Q 000470 1102 YHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFM 1181 (1472)
Q Consensus 1102 ~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~ 1181 (1472)
+..++.+|.++.|+|...+++++-.+|.|+||+.++.. .++.+.. ...+|....|-.. .++++
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-------------mVksfeV-~~~PvRa~kfiaR---knWiv 71 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-------------MVKSFEV-SEVPVRAAKFIAR---KNWIV 71 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccce-------------eeeeeee-cccchhhheeeec---cceEE
Confidence 33467889999999999999999999999999998511 1222221 2345666667776 67999
Q ss_pred EEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cccceEeccccCCceeEEe
Q 000470 1182 YSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCL 1260 (1472)
Q Consensus 1182 ~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~-~~i~s~~~~~~~~I~~l~~ 1260 (1472)
+|+.|..|++|+..+++.+..++. |.+.|.|++++|...+++++|.|-.|++||-... .+...+. +|..-|.++++
T Consensus 72 ~GsDD~~IrVfnynt~ekV~~FeA--H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe-GH~HyVMqv~f 148 (794)
T KOG0276|consen 72 TGSDDMQIRVFNYNTGEKVKTFEA--HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFE-GHEHYVMQVAF 148 (794)
T ss_pred EecCCceEEEEecccceeeEEeec--cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEc-CcceEEEEEEe
Confidence 999999999999999999999987 9999999999999999999999999999998754 3344444 46667999999
Q ss_pred ecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccc
Q 000470 1261 FVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1340 (1472)
Q Consensus 1261 ~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1340 (1472)
.|... +.+++++-|++|+||.+.+..+..++.
T Consensus 149 -nPkD~--------ntFaS~sLDrTVKVWslgs~~~nfTl~--------------------------------------- 180 (794)
T KOG0276|consen 149 -NPKDP--------NTFASASLDRTVKVWSLGSPHPNFTLE--------------------------------------- 180 (794)
T ss_pred -cCCCc--------cceeeeeccccEEEEEcCCCCCceeee---------------------------------------
Confidence 77543 578999999999999998776655554
Q ss_pred ccccCCCCCCcCCceEeccCCCC---cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeee
Q 000470 1341 VDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1417 (1472)
Q Consensus 1341 ~~~l~~~~~~~~~V~sl~~~p~g---~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1417 (1472)
+|..+|+|+.+-+.| +|+||++|..|++||.++..+..++.|
T Consensus 181 --------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeG--------------------------- 225 (794)
T KOG0276|consen 181 --------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEG--------------------------- 225 (794)
T ss_pred --------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhc---------------------------
Confidence 455689999998888 899999999999999998777655544
Q ss_pred cCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000470 1418 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1418 ~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|..-|..+ .|++.-++++|||.||+||||.
T Consensus 226 ------------------------Ht~Nvs~v-~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 226 ------------------------HTNNVSFV-FFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred ------------------------ccccceEE-EecCCCcEEEEecCCccEEEec
Confidence 88889988 6999999999999999999994
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-23 Score=209.35 Aligned_cols=165 Identities=16% Similarity=0.124 Sum_probs=131.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccCCcHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEE
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRL----STPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLV 76 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~gsL~d~l----~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvH~DLKpeNILv 76 (1472)
.+|.+|.||+.+..+...++.||.|..+|..+. ...+.++|.-+-+|+..++.||.|||++ .|+|||+||.|||+
T Consensus 103 ~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI 182 (282)
T KOG0984|consen 103 DCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI 182 (282)
T ss_pred CCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE
Confidence 479999999999999999999999998887654 4467799999999999999999999985 99999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+..|+||+||||.+...... .......|...|||||++.... +...|+-++||||||+++.||.++
T Consensus 183 n~~GqVKiCDFGIsG~L~dS--------iAkt~daGCkpYmaPEri~~e~------n~~gY~vksDvWSLGItmiElA~l 248 (282)
T KOG0984|consen 183 NYDGQVKICDFGISGYLVDS--------IAKTMDAGCKPYMAPERINPEL------NQKGYSVKSDVWSLGITMIEMAIL 248 (282)
T ss_pred ccCCcEEEcccccceeehhh--------hHHHHhcCCCccCChhhcCccc------Ccccceeehhhhhhhhhhhhhhhc
Confidence 99999999999987654211 1111123556799999987432 234799999999999999999999
Q ss_pred CCCCCc--hHHHHHHhcCCCCCcccC
Q 000470 157 VPFFEL--SHLLAYRRGQYDPSQHLE 180 (1472)
Q Consensus 157 ~~pf~~--~~~~~~~~~~~~~~~~l~ 180 (1472)
+.||+. ..+..+++....+.+.++
T Consensus 249 r~PY~~w~tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 249 RFPYESWGTPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred cccccccCCHHHHHHHHhcCCCCCCc
Confidence 888863 344555555555555554
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=224.16 Aligned_cols=274 Identities=17% Similarity=0.261 Sum_probs=214.7
Q ss_pred eEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccC
Q 000470 1062 NEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRG 1141 (1472)
Q Consensus 1062 ~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~ 1141 (1472)
+=+.|+. ...+|.|.. ..|.+|+..++. .......+...|+++.|+++|.+||+|..+|.|.|||+...
T Consensus 181 nlldWss-~n~laValg-~~vylW~~~s~~------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~--- 249 (484)
T KOG0305|consen 181 NLLDWSS-ANVLAVALG-QSVYLWSASSGS------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ--- 249 (484)
T ss_pred hHhhccc-CCeEEEEec-ceEEEEecCCCc------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc---
Confidence 3356773 345555443 579999998765 11122223667999999999999999999999999999741
Q ss_pred CCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCC
Q 000470 1142 LGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG 1221 (1472)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g 1221 (1472)
..++.+...|..-|.+++|+.. .+.+|+.+|.|..+|+|..+..-. ....|...|..+.|++++
T Consensus 250 ----------k~~~~~~~~h~~rvg~laW~~~-----~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~ 313 (484)
T KOG0305|consen 250 ----------KKTRTLRGSHASRVGSLAWNSS-----VLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDG 313 (484)
T ss_pred ----------cccccccCCcCceeEEEeccCc-----eEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCC
Confidence 1233444447788899999855 999999999999999999876655 233488899999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc--CCeEEEEEcCCCeEEEE
Q 000470 1222 NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG--CNEVSLWNAENGSCHQV 1299 (1472)
Q Consensus 1222 ~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~--dg~V~VWDl~t~~~~~~ 1299 (1472)
.+|++|+.|+.+.+||.+...+...+.. |.+.|..+.| +|... .+|++|+| |+.|++||+.+|.+...
T Consensus 314 ~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~aw-cP~q~--------~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 314 NQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAW-CPWQS--------GLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred CeeccCCCccceEeccCCCccccEEEec-cceeeeEeee-CCCcc--------CceEEcCCCcccEEEEEEcCCCcEecc
Confidence 9999999999999999987777776664 7788999999 78754 47888876 78899999999887665
Q ss_pred EecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEE-E-ccCCCeEEE
Q 000470 1300 LRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL-T-GGTDLKIRR 1376 (1472)
Q Consensus 1300 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ll-T-gg~Dg~Irl 1376 (1472)
.... ..|.++.|++.. .|+ | |-.++.|.+
T Consensus 384 vdtg------------------------------------------------sQVcsL~Wsk~~kEi~sthG~s~n~i~l 415 (484)
T KOG0305|consen 384 VDTG------------------------------------------------SQVCSLIWSKKYKELLSTHGYSENQITL 415 (484)
T ss_pred cccC------------------------------------------------CceeeEEEcCCCCEEEEecCCCCCcEEE
Confidence 5321 158999999877 444 4 444889999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCC
Q 000470 1377 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1456 (1472)
Q Consensus 1377 WDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1456 (1472)
|+..+.+....+ .+|...|..++ ++++|
T Consensus 416 w~~ps~~~~~~l---------------------------------------------------~gH~~RVl~la-~SPdg 443 (484)
T KOG0305|consen 416 WKYPSMKLVAEL---------------------------------------------------LGHTSRVLYLA-LSPDG 443 (484)
T ss_pred Eeccccceeeee---------------------------------------------------cCCcceeEEEE-ECCCC
Confidence 998765443333 24999999996 99999
Q ss_pred cEEEEEcCCceEEEcC
Q 000470 1457 RLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1457 ~~LvS~s~DG~IkVWk 1472 (1472)
..|+||+.|.++++|+
T Consensus 444 ~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 444 ETIVTGAADETLRFWN 459 (484)
T ss_pred CEEEEecccCcEEecc
Confidence 9999999999999996
|
|
| >KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=202.65 Aligned_cols=253 Identities=17% Similarity=0.240 Sum_probs=186.5
Q ss_pred ccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q 000470 1058 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDH 1137 (1472)
Q Consensus 1058 ~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~ 1137 (1472)
.+.|.++.|+|.+..|+.+|.||+++++|+...+ -++.+ .|+.++++++|.+ ...+++|+-||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~------l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS------LKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchh------hhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecC
Confidence 5789999999988888889999999999998754 22233 3567899999987 55788999999999999984
Q ss_pred cccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEE
Q 000470 1138 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1217 (1472)
.. ......|+.++.++++.+. ...+++|++|++|++||.|......++.. ...|.|+..
T Consensus 85 ~~---------------~~~igth~~~i~ci~~~~~---~~~vIsgsWD~~ik~wD~R~~~~~~~~d~---~kkVy~~~v 143 (323)
T KOG1036|consen 85 GN---------------EDQIGTHDEGIRCIEYSYE---VGCVISGSWDKTIKFWDPRNKVVVGTFDQ---GKKVYCMDV 143 (323)
T ss_pred Cc---------------ceeeccCCCceEEEEeecc---CCeEEEcccCccEEEEecccccccccccc---CceEEEEec
Confidence 11 1122356778889989876 45899999999999999998666666654 346766655
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcccceEe-ccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC--
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ-YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG-- 1294 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~-~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~-- 1294 (1472)
.|+.|++|+.+..+.+||+|......... ..-.-.+.+++. .|... -.++++-+|.|.|=.++..
T Consensus 144 --~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~-~pn~e---------Gy~~sSieGRVavE~~d~s~~ 211 (323)
T KOG1036|consen 144 --SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL-VPNGE---------GYVVSSIEGRVAVEYFDDSEE 211 (323)
T ss_pred --cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE-ecCCC---------ceEEEeecceEEEEccCCchH
Confidence 48899999999999999999765433211 112235777777 66443 3578888999888666654
Q ss_pred --eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC-CcEEEccCC
Q 000470 1295 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1371 (1472)
Q Consensus 1295 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~-g~llTgg~D 1371 (1472)
+...+|+.+..... ......+|++++|+|- |.++|||+|
T Consensus 212 ~~skkyaFkCHr~~~~--------------------------------------~~~~~yPVNai~Fhp~~~tfaTgGsD 253 (323)
T KOG1036|consen 212 AQSKKYAFKCHRLSEK--------------------------------------DTEIIYPVNAIAFHPIHGTFATGGSD 253 (323)
T ss_pred HhhhceeEEeeecccC--------------------------------------CceEEEEeceeEeccccceEEecCCC
Confidence 34455554432110 0112237999999985 689999999
Q ss_pred CeEEEEeCCCCCCceEEe
Q 000470 1372 LKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1372 g~IrlWDl~~~~~s~vv~ 1389 (1472)
|.|-+||+.+.++...+.
T Consensus 254 G~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 254 GIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred ceEEEccCcchhhhhhcc
Confidence 999999999888766444
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-21 Score=205.47 Aligned_cols=307 Identities=16% Similarity=0.196 Sum_probs=226.3
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCC
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~D 1127 (1472)
-+++..|.||++.|+.++.......+.|+|.|.+.+||.+.++. +..+|.+|.+.|.+++|++.+..+++++.|
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~------CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD 211 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGA------CLATYTGHTGSVNSIKFHNSGLLLLTASGD 211 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccc------ceeeecccccceeeEEeccccceEEEccCC
Confidence 35889999999999999998777799999999999999999876 778999999999999999999999999999
Q ss_pred CcEEEEEccc----cc--cCCCc-----c-------------ccccCccccee---ecCCCCcEEEEEEecCCCCCceEE
Q 000470 1128 GIIHMFSVDH----IS--RGLGN-----V-------------EKYSGISDIKK---KDTKEGAIVTLVNYNTDNCASHMF 1180 (1472)
Q Consensus 1128 G~I~vwdv~~----~~--~~~~~-----~-------------~~~~~~~~~~~---~~~~~~~~v~~~~~~~d~~s~~~L 1180 (1472)
++-+||...- .+ ...+. . .+..+ ..+|. -...|..+|.+..|-.. ++.+
T Consensus 212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~-~tiRvPl~~ltgH~~vV~a~dWL~g---g~Q~ 287 (481)
T KOG0300|consen 212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDG-HTIRVPLMRLTGHRAVVSACDWLAG---GQQM 287 (481)
T ss_pred cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCC-ceeeeeeeeeeccccceEehhhhcC---ccee
Confidence 9999998321 00 00000 0 00000 01111 11235556666667665 7799
Q ss_pred EEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEe
Q 000470 1181 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL 1260 (1472)
Q Consensus 1181 ~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~ 1260 (1472)
+++++|.+-.+||+.++..+..+.+ |....+-++-+|..+.+++.+.|-+.++||+|-...--..-.+|...+++..|
T Consensus 288 vTaSWDRTAnlwDVEtge~v~~LtG--Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 288 VTASWDRTANLWDVETGEVVNILTG--HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF 365 (481)
T ss_pred eeeeccccceeeeeccCceeccccC--cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE
Confidence 9999999999999999999999987 78889999999999999999999999999999544333333357778888888
Q ss_pred ecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccc
Q 000470 1261 FVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1339 (1472)
Q Consensus 1261 ~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1339 (1472)
.-+ ..+++|+.|.+|+|||++++. ...+++..
T Consensus 366 -~~d----------d~vVSgSDDrTvKvWdLrNMRsplATIRtd------------------------------------ 398 (481)
T KOG0300|consen 366 -NTD----------DRVVSGSDDRTVKVWDLRNMRSPLATIRTD------------------------------------ 398 (481)
T ss_pred -ecC----------CceeecCCCceEEEeeeccccCcceeeecC------------------------------------
Confidence 333 248889999999999998753 22333311
Q ss_pred cccccCCCCCCcCCceEeccCCCCc-EEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeec
Q 000470 1340 RVDELNEPPPRLLGIRSLLPLPGGD-LLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKR 1418 (1472)
Q Consensus 1340 ~~~~l~~~~~~~~~V~sl~~~p~g~-llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 1418 (1472)
.+++.++.+.++. ++---+.+.||+||+......+.-
T Consensus 399 ------------S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlP------------------------------ 436 (481)
T KOG0300|consen 399 ------------SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLP------------------------------ 436 (481)
T ss_pred ------------CccceeEeecCCceEEeccCCceEEEEecCCCccccCC------------------------------
Confidence 1456667766664 446666789999998743321100
Q ss_pred CCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee-cCCcEEEEEcCCceEEEcC
Q 000470 1419 QPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK-LNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~-~~~~~LvS~s~DG~IkVWk 1472 (1472)
...-.||..-|+++|+.+ .+-.-|.||+.|..+.=|+
T Consensus 437 -----------------rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 437 -----------------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred -----------------cccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 001236999999998333 2356699999999998885
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=233.07 Aligned_cols=257 Identities=15% Similarity=0.221 Sum_probs=197.6
Q ss_pred eeecc-ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCC----------------------------cc----cc---
Q 000470 1051 VAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKL----------------------------EK----DI--- 1094 (1472)
Q Consensus 1051 V~~l~-~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~----------------------------e~----~~--- 1094 (1472)
...+. +|.++|+++.||+||+||||||.||.|+||.+... +. ..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 34566 89999999999999999999999999999987650 00 00
Q ss_pred -------------------ccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccce
Q 000470 1095 -------------------SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIK 1155 (1472)
Q Consensus 1095 -------------------~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~ 1155 (1472)
.-++.+.|.+|.+.|.++.|+.++ .|++++.|.+|++|++.. . .++.
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-~------------~CL~ 404 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-K------------ECLK 404 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCC-c------------ceee
Confidence 012345678899999999998764 788999999999999973 1 0111
Q ss_pred eecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEE
Q 000470 1156 KKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL 1235 (1472)
Q Consensus 1156 ~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~l 1235 (1472)
--.|..-|+|++|+|.+ .+++++|+-||.|++|++-..+.+.-... ...||++||.|+|...++||-+|.+++
T Consensus 405 --~F~HndfVTcVaFnPvD--DryFiSGSLD~KvRiWsI~d~~Vv~W~Dl---~~lITAvcy~PdGk~avIGt~~G~C~f 477 (712)
T KOG0283|consen 405 --VFSHNDFVTCVAFNPVD--DRYFISGSLDGKVRLWSISDKKVVDWNDL---RDLITAVCYSPDGKGAVIGTFNGYCRF 477 (712)
T ss_pred --EEecCCeeEEEEecccC--CCcEeecccccceEEeecCcCeeEeehhh---hhhheeEEeccCCceEEEEEeccEEEE
Confidence 12467889999999986 56999999999999999988777654443 478999999999999999999999999
Q ss_pred EECCCCcccceEeccc-------cCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCC
Q 000470 1236 WDLRFLVPVNSWQYSQ-------VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGD 1308 (1472)
Q Consensus 1236 WDlr~~~~i~s~~~~~-------~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~ 1308 (1472)
|+.+..+....+.... ...|+.+.+ .|... ..|+|.+.|..|+|+|.++.+.+..|......
T Consensus 478 Y~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~-~p~~~--------~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~-- 546 (712)
T KOG0283|consen 478 YDTEGLKLVSDFHIRLHNKKKKQGKRITGLQF-FPGDP--------DEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT-- 546 (712)
T ss_pred EEccCCeEEEeeeEeeccCccccCceeeeeEe-cCCCC--------CeEEEecCCCceEEEeccchhhhhhhcccccC--
Confidence 9999887777665422 226999988 55432 25889999999999999877766666532210
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCCC
Q 000470 1309 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1309 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~ 1382 (1472)
..-....|+.+| .||+|++|..|++|+....
T Consensus 547 -------------------------------------------~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 547 -------------------------------------------SSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred -------------------------------------------CcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 011233445577 8889999999999998543
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=210.12 Aligned_cols=283 Identities=17% Similarity=0.200 Sum_probs=226.7
Q ss_pred cceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q 000470 1059 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1138 (1472)
Q Consensus 1059 ~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~ 1138 (1472)
..|+++...|...+++||+.|.++.++|..+.. -..+|.+|...|+++.|+++...+++++.|..|+||.+...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQ------ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhh------hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 457888888877899999999999999987654 56688999999999999999999999999999999988631
Q ss_pred ccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEc
Q 000470 1139 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1218 (1472)
Q Consensus 1139 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1218 (1472)
. .......|..+|+.+..+|. |.+|+++++||+..+.|++++............-.+++.+|+
T Consensus 294 s--------------~~~~~~~h~~~V~~ls~h~t---geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 294 S--------------EPTSSRPHEEPVTGLSLHPT---GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred c--------------CccccccccccceeeeeccC---CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 1 12223456778888889998 889999999999999999999987665542233458999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEE
Q 000470 1219 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1298 (1472)
Q Consensus 1219 p~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~ 1298 (1472)
|||..|.+|+.||.|++||+..+..+..|.. |.++|..+.| + .+|+|+++++.|++|.+||+++.+..+
T Consensus 357 pDgLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~F-s---------ENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 357 PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISF-S---------ENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred CCceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEe-c---------cCceEEEEEecCCeEEEEEehhhcccc
Confidence 9999999999999999999999988877775 8889999988 3 357799999999999999999876555
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEE
Q 000470 1299 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1299 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
.+.... ..+|.++.|.+.| +|+.+|.|=+|+++
T Consensus 426 t~~l~~----------------------------------------------~~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 426 TIQLDE----------------------------------------------KKEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred eeeccc----------------------------------------------cccceeEEEcCCCCeEEeecceeEEEEE
Confidence 443111 1158899999888 67788999888888
Q ss_pred eCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCc
Q 000470 1378 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1457 (1472)
Q Consensus 1378 Dl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1457 (1472)
+-.+..-..+.. +.-|.+..+.| .|.....
T Consensus 460 ~k~~k~W~~~~~-------------------------------------------------~~~~sg~st~v-~Fg~~aq 489 (506)
T KOG0289|consen 460 KKKTKSWTEIKE-------------------------------------------------LADHSGLSTGV-RFGEHAQ 489 (506)
T ss_pred ecccccceeeeh-------------------------------------------------hhhccccccee-eecccce
Confidence 754433221111 11266677777 4888899
Q ss_pred EEEEEcCCceEEEc
Q 000470 1458 LLISSSRDGAIKVW 1471 (1472)
Q Consensus 1458 ~LvS~s~DG~IkVW 1471 (1472)
+++++|.|...+++
T Consensus 490 ~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 490 YLASTSMDAILRLY 503 (506)
T ss_pred EEeeccchhheEEe
Confidence 99999999999886
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-22 Score=242.40 Aligned_cols=144 Identities=24% Similarity=0.227 Sum_probs=123.0
Q ss_pred CCCCCcceeeEEEEeCC------eEEEEecccC-CcHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~------~~~lV~Ey~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLK 70 (1472)
|+|||||++.++-++.. ...+|||||. |+|+.++... ..|++.+...++..+..||.|||++||+|||||
T Consensus 68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlK 147 (732)
T KOG4250|consen 68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLK 147 (732)
T ss_pred cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Confidence 68999999999887654 5689999999 7999999763 249999999999999999999999999999999
Q ss_pred CCCEEEcc--CC--cEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 71 CENVLVTS--WN--WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 71 peNILv~~--~~--~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
|+||++-. +| ..||+|||.||..... ..+.+..||..|++||.+.. ...|+..+|.||+
T Consensus 148 P~NIvl~~Gedgq~IyKLtDfG~Arel~d~--------s~~~S~vGT~~YLhPel~E~---------q~~y~~tVDLWS~ 210 (732)
T KOG4250|consen 148 PGNIVLQIGEDGQSIYKLTDFGAARELDDN--------SLFTSLVGTEEYLHPELYER---------QKKYTATVDLWSF 210 (732)
T ss_pred CCcEEEeecCCCceEEeeecccccccCCCC--------CeeeeecCchhhcChHHHhh---------ccCcCceeehhhh
Confidence 99999843 23 4899999999976311 14677789999999998742 3578999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 000470 147 GCVIAELFLEVPFFE 161 (1472)
Q Consensus 147 G~il~eLltg~~pf~ 161 (1472)
||++|+..||..||.
T Consensus 211 GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 211 GVTLYECATGELPFI 225 (732)
T ss_pred hhHHHHHhccCCCCC
Confidence 999999999988884
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=233.43 Aligned_cols=301 Identities=15% Similarity=0.210 Sum_probs=219.3
Q ss_pred ccc-cceeEEEEcCCCCEEEEEe--CCCCEEEEeCCCCc-----ccc-ccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1056 EHC-SAVNEIAISHDHSFFVSAS--DDSTVKVWDSRKLE-----KDI-SFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1056 ~H~-~~V~~lafspd~~~laSgS--~DGtVkvWD~~~~e-----~~~-~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
+|. ..|.+|.++|||..||||+ .||.++||.....- ++. ..+..++...|.+.|+|+.|++||.+||+||+
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 444 5799999999999999999 89999999976432 222 23456778889999999999999999999999
Q ss_pred CCcEEEEEccccccCCCccccc-cCc-----ccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcc
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKY-SGI-----SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~ 1200 (1472)
|+.|.||+-... ..+...+. .+. .........|..-|.-++|+|+ +.+|++++.|++|.+||.++.+.+
T Consensus 90 D~~v~iW~~~~~--~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~---~~~lvS~s~DnsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 90 DRLVMIWERAEI--GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD---DSLLVSVSLDNSVIIWNAKTFELL 164 (942)
T ss_pred cceEEEeeeccc--CCcccccccccccccceeeEEEEEecCCCccceeccCCC---ccEEEEecccceEEEEccccceee
Confidence 999999998731 11111111 011 1122223345666667789998 679999999999999999999989
Q ss_pred ceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEecccc-----CCceeEEeecCCCCCccccCCCC
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQV-----CPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~-----~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
.++.. |++.|-.+.|||-|++|++-+.|++|++|++......+++..+.. ....++.| +|++.
T Consensus 165 ~vl~~--H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSW-SPDG~--------- 232 (942)
T KOG0973|consen 165 KVLRG--HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSW-SPDGH--------- 232 (942)
T ss_pred eeeec--ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeeccc-CCCcC---------
Confidence 99987 999999999999999999999999999999777666666655432 24567777 77665
Q ss_pred EEEEEEc----CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc
Q 000470 1276 LIYVAAG----CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351 (1472)
Q Consensus 1276 ~l~vas~----dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1351 (1472)
+++++.+ -..+.|.+-.+.++-.-|.+ |.
T Consensus 233 ~las~nA~n~~~~~~~IieR~tWk~~~~LvG-----------------------------------------------H~ 265 (942)
T KOG0973|consen 233 HLASPNAVNGGKSTIAIIERGTWKVDKDLVG-----------------------------------------------HS 265 (942)
T ss_pred eecchhhccCCcceeEEEecCCceeeeeeec-----------------------------------------------CC
Confidence 6666533 23466666555444444432 22
Q ss_pred CCceEeccCC--------C----------CcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEE
Q 000470 1352 LGIRSLLPLP--------G----------GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVV 1413 (1472)
Q Consensus 1352 ~~V~sl~~~p--------~----------g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~ 1413 (1472)
.++.++.|+| + ..+++||.|+.|-+|....+....++...
T Consensus 266 ~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l---------------------- 323 (942)
T KOG0973|consen 266 APVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL---------------------- 323 (942)
T ss_pred CceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh----------------------
Confidence 3344444432 0 13558999999999998766554433210
Q ss_pred EeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1414 QERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1414 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
-..+|.|+. |+++|..|..||.||+|.+.
T Consensus 324 ----------------------------f~~SI~Dms-WspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 324 ----------------------------FNKSIVDMS-WSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred ----------------------------hcCceeeee-EcCCCCeEEEEecCCeEEEE
Confidence 235799995 99999999999999999875
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-21 Score=197.00 Aligned_cols=223 Identities=19% Similarity=0.248 Sum_probs=178.8
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+| +|.|++++.+|...|..++.+.|+..|++|+.|..|.+||+.+++ ....+.+|.+.|..+.|.+.+.
T Consensus 41 vrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk------v~Rr~rgH~aqVNtV~fNeesS 114 (307)
T KOG0316|consen 41 VRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK------VDRRFRGHLAQVNTVRFNEESS 114 (307)
T ss_pred EEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe------eeeecccccceeeEEEecCcce
Confidence 468997 699999999999999999999999999999999999999999987 3446778999999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++|+.|.++++||.+.. ..+++..++.. ...|..+..+. ..+++|+.||+++.||+|.|+.
T Consensus 115 Vv~SgsfD~s~r~wDCRS~-----------s~ePiQildea-~D~V~Si~v~~-----heIvaGS~DGtvRtydiR~G~l 177 (307)
T KOG0316|consen 115 VVASGSFDSSVRLWDCRSR-----------SFEPIQILDEA-KDGVSSIDVAE-----HEIVAGSVDGTVRTYDIRKGTL 177 (307)
T ss_pred EEEeccccceeEEEEcccC-----------CCCccchhhhh-cCceeEEEecc-----cEEEeeccCCcEEEEEeeccee
Confidence 9999999999999999731 12233333322 23344554543 3899999999999999999887
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeE--EeecCCCCCccccCCCCEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM--CLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l--~~~~p~~~~~~~~~~~~~l 1277 (1472)
....- ..+|+|++|+++++..+.|+-+++|++-|-.+++.++++.. |...-.++ ++ ... ...+
T Consensus 178 ~sDy~----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn~eykldc~l-~qs---------dthV 242 (307)
T KOG0316|consen 178 SSDYF----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKNMEYKLDCCL-NQS---------DTHV 242 (307)
T ss_pred ehhhc----CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-cccceeeeeeee-ccc---------ceeE
Confidence 55443 45899999999999999999999999999999999988775 33222222 22 222 2368
Q ss_pred EEEEcCCeEEEEEcCCCeEEEEEe
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~t~~~~~~l~ 1301 (1472)
+.|+.||.|.+||+........+.
T Consensus 243 ~sgSEDG~Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 243 FSGSEDGKVYFWDLVDETQISKLS 266 (307)
T ss_pred EeccCCceEEEEEeccceeeeeec
Confidence 899999999999999877666555
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-20 Score=229.92 Aligned_cols=226 Identities=12% Similarity=0.161 Sum_probs=166.3
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCC-CCEEEEEeCCCCEEEEeCCCCcccc-c-cccceEEeccCCceEEEEEecC
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd-~~~laSgS~DGtVkvWD~~~~e~~~-~-~~~~~t~~~~~~~I~~v~f~~~ 1117 (1472)
..|+. +...+..+.+|.++|++++|+|+ +.+|||||.||+|+|||+.+..... . ......+.+|...|.+++|+|+
T Consensus 57 ~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~ 136 (568)
T PTZ00420 57 RLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPM 136 (568)
T ss_pred EeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCC
Confidence 35653 45678899999999999999996 7899999999999999997643111 0 1233466788889999999998
Q ss_pred CCE-EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCC
Q 000470 1118 SAQ-VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1196 (1472)
Q Consensus 1118 ~~~-las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt 1196 (1472)
+.. +++|+.||+|+|||+.... ....+ .+...+.++.|+++ |.+|++++.|+.|++||+|+
T Consensus 137 g~~iLaSgS~DgtIrIWDl~tg~-------------~~~~i--~~~~~V~Slswspd---G~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 137 NYYIMCSSGFDSFVNIWDIENEK-------------RAFQI--NMPKKLSSLKWNIK---GNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCeEEEEEeCCCeEEEEECCCCc-------------EEEEE--ecCCcEEEEEECCC---CCEEEEEecCCEEEEEECCC
Confidence 765 5789999999999997311 11111 23456888999998 77999999999999999999
Q ss_pred CCccceeecCCCccceEEE-----EEcCCCCEEEEEeCCC----cEEEEECCC-CcccceEeccccCCceeEEeecCCCC
Q 000470 1197 NSNTWTLKAIPEEGYVSSL-----VTGPCGNWFVSGSSRG----VLTLWDLRF-LVPVNSWQYSQVCPIEKMCLFVPPPN 1266 (1472)
Q Consensus 1197 ~~~~~~l~~~~h~g~Itsl-----~~sp~g~~LvsGssdG----~I~lWDlr~-~~~i~s~~~~~~~~I~~l~~~~p~~~ 1266 (1472)
++.+.++.. |.+.+.+. .|++++.+|++++.++ .|++||+|. ..++..+.......+....+ .++
T Consensus 199 g~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~-D~~-- 273 (568)
T PTZ00420 199 QEIASSFHI--HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY-DES-- 273 (568)
T ss_pred CcEEEEEec--ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee-eCC--
Confidence 998887765 66654433 3458888988877664 799999995 56666654432222111122 221
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCeE
Q 000470 1267 AAVSTTARPLIYVAAGCNEVSLWNAENGSC 1296 (1472)
Q Consensus 1267 ~~~~~~~~~~l~vas~dg~V~VWDl~t~~~ 1296 (1472)
.+.++++|++|+.|++|++..+.+
T Consensus 274 ------tg~l~lsGkGD~tIr~~e~~~~~~ 297 (568)
T PTZ00420 274 ------TGLIYLIGKGDGNCRYYQHSLGSI 297 (568)
T ss_pred ------CCCEEEEEECCCeEEEEEccCCcE
Confidence 245788899999999999987753
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-20 Score=228.15 Aligned_cols=266 Identities=12% Similarity=0.116 Sum_probs=185.9
Q ss_pred cccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccc----c---ccceEEeccCCceEEEEEec-CCCEEEEEeCCC
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDIS----F---RSRLTYHLEGSRALCTMMLR-HSAQVVVGACDG 1128 (1472)
Q Consensus 1057 H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~----~---~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG 1128 (1472)
|-..|+....++|+..+++++.+..+..|+...+..... . .....+.+|.+.|++++|+| +++.|++|+.||
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 344566666777877788888888888888654321110 0 11224678899999999999 789999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+|++||+..... .... ...+. ....|...|.++.|+|+. +++|++++.|++|++||+++++....+.. |
T Consensus 99 tIkIWdi~~~~~----~~~~--~~~l~-~L~gH~~~V~~l~f~P~~--~~iLaSgs~DgtVrIWDl~tg~~~~~l~~--h 167 (493)
T PTZ00421 99 TIMGWGIPEEGL----TQNI--SDPIV-HLQGHTKKVGIVSFHPSA--MNVLASAGADMVVNVWDVERGKAVEVIKC--H 167 (493)
T ss_pred EEEEEecCCCcc----cccc--CcceE-EecCCCCcEEEEEeCcCC--CCEEEEEeCCCEEEEEECCCCeEEEEEcC--C
Confidence 999999973110 0000 01122 223466778899999974 35999999999999999999988777765 7
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE----cCC
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA----GCN 1284 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas----~dg 1284 (1472)
.+.|++++|+|+|.+|++|+.||.|++||+|.+..+..+.......+.++.| .+... .+++++ .++
T Consensus 168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w-~~~~~---------~ivt~G~s~s~Dr 237 (493)
T PTZ00421 168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW-AKRKD---------LIITLGCSKSQQR 237 (493)
T ss_pred CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE-cCCCC---------eEEEEecCCCCCC
Confidence 8899999999999999999999999999999998887765422223344555 55432 455543 368
Q ss_pred eEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-
Q 000470 1285 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1363 (1472)
Q Consensus 1285 ~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g- 1363 (1472)
.|.+||+++......... . .....+....|++++
T Consensus 238 ~VklWDlr~~~~p~~~~~--~-------------------------------------------d~~~~~~~~~~d~d~~ 272 (493)
T PTZ00421 238 QIMLWDTRKMASPYSTVD--L-------------------------------------------DQSSALFIPFFDEDTN 272 (493)
T ss_pred eEEEEeCCCCCCceeEec--c-------------------------------------------CCCCceEEEEEcCCCC
Confidence 999999986542211110 0 011134556677887
Q ss_pred cEEEcc-CCCeEEEEeCCCCCCceEE
Q 000470 1364 DLLTGG-TDLKIRRWDHCSPGRSYCI 1388 (1472)
Q Consensus 1364 ~llTgg-~Dg~IrlWDl~~~~~s~vv 1388 (1472)
.+++|| .|+.||+||+.+++..+..
T Consensus 273 ~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 273 LLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 555666 5999999999987655443
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=270.50 Aligned_cols=190 Identities=17% Similarity=0.229 Sum_probs=145.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEE
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH---EKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH---~~gIvH~DLKpeNILv 76 (1472)
++||||+++++++.++...|+||||++ |+|.++++. +++.++..|+.|++.||+||| +.+|+||||||+||++
T Consensus 740 l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 579999999999999999999999999 799999964 789999999999999999999 6699999999999999
Q ss_pred ccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 77 ~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+.++..++. ||....... .....+++.|+|||.+. ...++.++||||+||++|||++|
T Consensus 817 ~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~----------~~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 817 DGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRE----------TKDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred CCCCceEEE-ecccccccc-----------CCCccccccccCccccc----------CCCCCcccchhhHHHHHHHHHhC
Confidence 998887775 664432210 01224678899999764 34688999999999999999999
Q ss_pred CCCCCch-----HHHHHHhcCCCC-------CcccCC------CCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhcc
Q 000470 157 VPFFELS-----HLLAYRRGQYDP-------SQHLEK------IPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 157 ~~pf~~~-----~~~~~~~~~~~~-------~~~l~~------~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 215 (1472)
++||+.. ...++.+..+.. .+.+.. ....++.+++.+||+.||++||+++|+++.++..
T Consensus 875 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 875 KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9888532 122221111100 001100 1112567899999999999999999999986543
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=206.58 Aligned_cols=259 Identities=18% Similarity=0.304 Sum_probs=199.0
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCC
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG 1128 (1472)
.++++|-.|.+.|+.+.|+|....|+|||.|++||++|..+..-...+ .+-....+|.++.|+|.|..+++|+...
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~----K~~qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAF----KVFQDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHH----HHhhccceeeeEeecCCCceEEEecCCC
Confidence 378999999999999999999999999999999999999864321111 1223445799999999999999999999
Q ss_pred cEEEEEccccccCCCccccccCccccee--ecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKK--KDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
++|+||+.+.. +... .+..|...|+++.+++. +.+.++|+.||.|++||=-+++|+.++.+.
T Consensus 239 ~~rlYdv~T~Q-------------cfvsanPd~qht~ai~~V~Ys~t---~~lYvTaSkDG~IklwDGVS~rCv~t~~~A 302 (430)
T KOG0640|consen 239 TLRLYDVNTYQ-------------CFVSANPDDQHTGAITQVRYSST---GSLYVTASKDGAIKLWDGVSNRCVRTIGNA 302 (430)
T ss_pred ceeEEecccee-------------EeeecCcccccccceeEEEecCC---ccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence 99999998522 1111 23356678899999998 789999999999999999999999999874
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE-cCCe
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-GCNE 1285 (1472)
Q Consensus 1207 ~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas-~dg~ 1285 (1472)
.....|++..|..+|+++++.+-|..++||.+.++.+++.+.......-... - .+ +.|.....+++.-. ..++
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~----r-tq-AvFNhtEdyVl~pDEas~s 376 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKH----R-TQ-AVFNHTEDYVLFPDEASNS 376 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhh----h-hh-hhhcCccceEEccccccCc
Confidence 4455799999999999999999999999999999999998876432211000 0 00 11111222444333 3567
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-c
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~ 1364 (1472)
+--||.+++..+..+. .+|...++.+..+|.+ .
T Consensus 377 lcsWdaRtadr~~l~s----------------------------------------------lgHn~a~R~i~HSP~~p~ 410 (430)
T KOG0640|consen 377 LCSWDARTADRVALLS----------------------------------------------LGHNGAVRWIVHSPVEPA 410 (430)
T ss_pred eeeccccchhhhhhcc----------------------------------------------cCCCCCceEEEeCCCCCc
Confidence 8889988765433322 4566789999999988 7
Q ss_pred EEEccCCCeEEEEeC
Q 000470 1365 LLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl 1379 (1472)
++|||.|.++|||--
T Consensus 411 FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 411 FMTCSDDFRARFWYR 425 (430)
T ss_pred eeeecccceeeeeee
Confidence 889999999999963
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.6e-23 Score=235.73 Aligned_cols=141 Identities=29% Similarity=0.289 Sum_probs=126.3
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-C-cHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-N-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
+|+||++++++||+++.+||+||--+ | +|+++|.-++.++|.+++.|++|++.|+++||++||||||||-||++++++
T Consensus 627 sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 627 SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence 49999999999999999999999887 6 999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 159 (1472)
|.+||+|||.+..+ .+..|++..||..|.|||++.+.. ..+..-|||++|+++|.++....|
T Consensus 707 g~~klidfgsaa~~---------ksgpfd~f~gtv~~aapevl~g~~---------y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYT---------KSGPFDVFVGTVDYAAPEVLGGEK---------YLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred CeEEEeeccchhhh---------cCCCcceeeeeccccchhhhCCCc---------cCCCcchhhhhhheeeEEEeccCC
Confidence 99999999987654 133568888999999999886433 346677999999999999888555
Q ss_pred C
Q 000470 160 F 160 (1472)
Q Consensus 160 f 160 (1472)
|
T Consensus 769 y 769 (772)
T KOG1152|consen 769 Y 769 (772)
T ss_pred C
Confidence 5
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-20 Score=227.64 Aligned_cols=220 Identities=12% Similarity=0.181 Sum_probs=164.6
Q ss_pred eccccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccc-cccccceEEeccCCceEEEEEecCC-CEEEEEeCCCc
Q 000470 1053 HLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKD-ISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGACDGI 1129 (1472)
Q Consensus 1053 ~l~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~-~~~~~~~t~~~~~~~I~~v~f~~~~-~~las~s~DG~ 1129 (1472)
.+.+|.+.|++++|+| ++.+|||||.||+|+|||+.+.... .......++.+|...|.+++|+|++ +.|++|+.||+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4789999999999999 8889999999999999999764311 1112445678899999999999975 79999999999
Q ss_pred EEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCc
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209 (1472)
Q Consensus 1130 I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~ 1209 (1472)
|+|||+.+.. .... ...+...+..+.|+|+ +..|++++.||.|++||+|+++.+.++.. |.
T Consensus 150 VrIWDl~tg~-------------~~~~-l~~h~~~V~sla~spd---G~lLatgs~Dg~IrIwD~rsg~~v~tl~~--H~ 210 (493)
T PTZ00421 150 VNVWDVERGK-------------AVEV-IKCHSDQITSLEWNLD---GSLLCTTSKDKKLNIIDPRDGTIVSSVEA--HA 210 (493)
T ss_pred EEEEECCCCe-------------EEEE-EcCCCCceEEEEEECC---CCEEEEecCCCEEEEEECCCCcEEEEEec--CC
Confidence 9999997311 1111 2245567889999998 77999999999999999999998877765 55
Q ss_pred cc-eEEEEEcCCCCEEEEEe----CCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE-c
Q 000470 1210 GY-VSSLVTGPCGNWFVSGS----SRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G 1282 (1472)
Q Consensus 1210 g~-Itsl~~sp~g~~LvsGs----sdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas-~ 1282 (1472)
+. +..+.|.+++..+++++ .||.|++||+|... ++........ ....+.++++++ .++++++ +
T Consensus 211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~-~~~~~~~~d~d~---------~~L~lggkg 280 (493)
T PTZ00421 211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQS-SALFIPFFDEDT---------NLLYIGSKG 280 (493)
T ss_pred CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCC-CceEEEEEcCCC---------CEEEEEEeC
Confidence 43 45677888877776543 47999999999754 3333332222 222333335544 4777776 6
Q ss_pred CCeEEEEEcCCCeEEEEEe
Q 000470 1283 CNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~ 1301 (1472)
|+.|++||+.+++......
T Consensus 281 Dg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 281 EGNIRCFELMNERLTFCSS 299 (493)
T ss_pred CCeEEEEEeeCCceEEEee
Confidence 9999999999988765543
|
|
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.1e-21 Score=202.05 Aligned_cols=310 Identities=16% Similarity=0.234 Sum_probs=210.8
Q ss_pred cccccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCcc----ccccccce-----EEeccCCceEEEEEec-CCCEEEE
Q 000470 1055 QEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEK----DISFRSRL-----TYHLEGSRALCTMMLR-HSAQVVV 1123 (1472)
Q Consensus 1055 ~~H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~----~~~~~~~~-----t~~~~~~~I~~v~f~~-~~~~las 1123 (1472)
.-|.+.||++.+.+ .|++++||+.||.+.|||++.... ....+..+ .-.+|.-.|.++.|.| +...|.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 34889999999987 689999999999999999986441 11122222 2235666899999999 5667888
Q ss_pred EeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCcccee
Q 000470 1124 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1124 ~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
++.|.+++|||..+.. ..+.......|...+++|-..+.-.+++|+.+-.|++.|+.+|....+|
T Consensus 120 sSFDhtlKVWDtnTlQ---------------~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L 184 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQ---------------EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL 184 (397)
T ss_pred ccccceEEEeecccce---------------eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee
Confidence 9999999999998521 1222333455666677776443347888999999999999999999999
Q ss_pred ecCCCccceEEEEEcCCCCE-EEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1204 KAIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1204 ~~~~h~g~Itsl~~sp~g~~-LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
.+ |.+.|.++.|+|...| |++|+.||.|++||+|..
T Consensus 185 sG--Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra----------------------------------------- 221 (397)
T KOG4283|consen 185 SG--HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA----------------------------------------- 221 (397)
T ss_pred cc--ccCceEEEEeccCceeEEEecCCCceEEEEEeecc-----------------------------------------
Confidence 87 9999999999998887 679999999999999831
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
.|.+.+.|...++....+. ..+.|...|..++|..+
T Consensus 222 sgcf~~lD~hn~k~~p~~~--------------------------------------------~n~ah~gkvngla~tSd 257 (397)
T KOG4283|consen 222 SGCFRVLDQHNTKRPPILK--------------------------------------------TNTAHYGKVNGLAWTSD 257 (397)
T ss_pred cceeEEeecccCccCcccc--------------------------------------------ccccccceeeeeeeccc
Confidence 1112233333322111111 12456668999999999
Q ss_pred C-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCC
Q 000470 1363 G-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGC 1441 (1472)
Q Consensus 1363 g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1441 (1472)
| .++++|.|.++|+|+..+++.+..-.|+-.......+-...+....-.|+--.... .+.--+..+......+..
T Consensus 258 ~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~----~lall~~~sgs~ir~l~~ 333 (397)
T KOG4283|consen 258 ARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDG----SLALLNLLEGSFVRRLST 333 (397)
T ss_pred chhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCC----eEEEEEccCceEEEeeec
Confidence 8 78899999999999999998876666654322111111222222222222111100 000000111223345667
Q ss_pred CccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1442 HRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1442 H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
|...|.+. .+.++..-..++++||.|..|
T Consensus 334 h~k~i~c~-~~~~~fq~~~tg~~d~ni~~w 362 (397)
T KOG4283|consen 334 HLKRINCA-AYRPDFEQCFTGDMNGNIYMW 362 (397)
T ss_pred ccceeeEE-eecCchhhhhccccCCccccc
Confidence 98888877 488888889999999999888
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7e-22 Score=232.25 Aligned_cols=195 Identities=16% Similarity=0.137 Sum_probs=159.7
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~ 77 (1472)
|.|||++++|++..+ ..+.||||+++ |+|.++|.+ ++.|-......++.||+.|+.||.++++|||||...|+|+-
T Consensus 168 L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla 246 (1039)
T KOG0199|consen 168 LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA 246 (1039)
T ss_pred ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec
Confidence 679999999999988 77899999999 899999987 45578888999999999999999999999999999999999
Q ss_pred cCCcEEEEeccccccccCCCCCCCCCceeec-cCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhC
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg 156 (1472)
+...|||+|||+.+.....++ .|.+. ...-...|.|||.+. ...++.++|+|++|++|||||++
T Consensus 247 sprtVKI~DFGLmRaLg~ned-----~Yvm~p~rkvPfAWCaPEsLr----------h~kFShaSDvWmyGVTiWEMFty 311 (1039)
T KOG0199|consen 247 SPRTVKICDFGLMRALGENED-----MYVMAPQRKVPFAWCAPESLR----------HRKFSHASDVWMYGVTIWEMFTY 311 (1039)
T ss_pred ccceeeeecccceeccCCCCc-----ceEecCCCcCcccccCHhHhc----------cccccccchhhhhhhhHHhhhcc
Confidence 999999999999987754333 22222 223355699999765 45789999999999999999996
Q ss_pred -CCCCCchHHHHH-HhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 157 -VPFFELSHLLAY-RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 -~~pf~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
+.||.+-.-..+ .+........-++.+++++.+++.+||..+|.+||++..+.++
T Consensus 312 GEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 312 GEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 888865443333 2322222334566788999999999999999999999999865
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-21 Score=199.66 Aligned_cols=243 Identities=15% Similarity=0.238 Sum_probs=189.4
Q ss_pred cccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEec-CCCEEEEEeCCCcEEEEE
Q 000470 1057 HCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFS 1134 (1472)
Q Consensus 1057 H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~-~~~~las~s~DG~I~vwd 1134 (1472)
-.+.+..++|++... .+++|+.||+++|||....+ .+...++.|...|.++.|.+ ++..++++|.||+|++|+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-----~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~ 133 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-----KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWD 133 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCC-----cchhHHHhhhhheEEeccccccceeEEeeccCCceEeec
Confidence 457899999998664 78899999999999965443 36677888999999999998 567788999999999999
Q ss_pred ccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEE
Q 000470 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214 (1472)
Q Consensus 1135 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1214 (1472)
..... .++. ..++..+|....|+|.. ++.+++++.||.+++||+|.......++. |...|.|
T Consensus 134 ~~r~~-------------Sv~T-f~gh~~~Iy~a~~sp~~--~nlfas~Sgd~~l~lwdvr~~gk~~~i~a--h~~Eil~ 195 (311)
T KOG0277|consen 134 PNRPN-------------SVQT-FNGHNSCIYQAAFSPHI--PNLFASASGDGTLRLWDVRSPGKFMSIEA--HNSEILC 195 (311)
T ss_pred CCCCc-------------ceEe-ecCCccEEEEEecCCCC--CCeEEEccCCceEEEEEecCCCceeEEEe--ccceeEe
Confidence 86211 1122 34578889999999986 45999999999999999998644334544 7789999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEECCCCc-ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000470 1215 LVTGP-CGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1215 l~~sp-~g~~LvsGssdG~I~lWDlr~~~-~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~ 1292 (1472)
+.|+. +.+.|+||+.|+.|++||+|... ++..+ .+|.-.|+++.+ +|... ..+++++.|-++++||.+
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL-~gh~~AVRkvk~-Sph~~--------~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL-NGHGLAVRKVKF-SPHHA--------SLLASASYDMTVRIWDPE 265 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhccccceee-cCCceEEEEEec-Ccchh--------hHhhhccccceEEecccc
Confidence 99998 66889999999999999999754 44444 457778999998 88654 478899999999999988
Q ss_pred CCe-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC--CCcEEEcc
Q 000470 1293 NGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GGDLLTGG 1369 (1472)
Q Consensus 1293 t~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p--~g~llTgg 1369 (1472)
.+. ++++.. .|..-|..+.|++ .+.++++|
T Consensus 266 ~~ds~~e~~~-----------------------------------------------~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 266 RQDSAIETVD-----------------------------------------------HHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred cchhhhhhhh-----------------------------------------------ccceEEeccccccccCceeeecc
Confidence 543 222221 1222466677765 35899999
Q ss_pred CCCeEEEEeC
Q 000470 1370 TDLKIRRWDH 1379 (1472)
Q Consensus 1370 ~Dg~IrlWDl 1379 (1472)
.|..+++|+.
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999983
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=220.50 Aligned_cols=255 Identities=17% Similarity=0.270 Sum_probs=194.7
Q ss_pred CCccc--ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC-
Q 000470 1042 SGWRP--RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS- 1118 (1472)
Q Consensus 1042 ~~W~p--~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~- 1118 (1472)
..|+- .|.+++++.+|..+|..++|+++|..|.|+|.|+++|+||+.++.. ...++. +..++|+.|.|++
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~------~~~f~~-~~~~~cvkf~pd~~ 312 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV------LSRFHL-DKVPTCVKFHPDNQ 312 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE------EEEEec-CCCceeeecCCCCC
Confidence 46873 5899999999999999999999999999999999999999999873 233332 3458999999987
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
+.|++|+.|+.|+.||++... -+..++.+-+ .+..+.|-++ +..+++++.|+++++|+.+.+-
T Consensus 313 n~fl~G~sd~ki~~wDiRs~k-------------vvqeYd~hLg-~i~~i~F~~~---g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 313 NIFLVGGSDKKIRQWDIRSGK-------------VVQEYDRHLG-AILDITFVDE---GRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred cEEEEecCCCcEEEEeccchH-------------HHHHHHhhhh-heeeeEEccC---CceEeeeccCccEEEEEcCCCc
Confidence 889999999999999998411 2333443334 4555668887 7799999999999999999887
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC--cccceEeccccCC--ceeEEeecCCCCCccccCCC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL--VPVNSWQYSQVCP--IEKMCLFVPPPNAAVSTTAR 1274 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~--~~i~s~~~~~~~~--I~~l~~~~p~~~~~~~~~~~ 1274 (1472)
.+.-.. ..+.....|+..+|++.|+++-+-|..|.++.+.-. .-.+..-.+|..+ -.++.| +| +|
T Consensus 376 ~ik~i~-~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f-Sp---------DG 444 (503)
T KOG0282|consen 376 PIKNIA-DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF-SP---------DG 444 (503)
T ss_pred cchhhc-chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE-cC---------CC
Confidence 665333 234557889999999999999999999999986432 1111111122222 223344 55 45
Q ss_pred CEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1275 ~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
.+|++|.++|.+.+||..+.+....+. .|...+
T Consensus 445 ~~l~SGdsdG~v~~wdwkt~kl~~~lk-----------------------------------------------ah~~~c 477 (503)
T KOG0282|consen 445 RTLCSGDSDGKVNFWDWKTTKLVSKLK-----------------------------------------------AHDQPC 477 (503)
T ss_pred CeEEeecCCccEEEeechhhhhhhccc-----------------------------------------------cCCcce
Confidence 699999999999999998866544443 233368
Q ss_pred eEeccCCCC--cEEEccCCCeEEEEe
Q 000470 1355 RSLLPLPGG--DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1355 ~sl~~~p~g--~llTgg~Dg~IrlWD 1378 (1472)
..+.|+|.. .++|||.||.|++||
T Consensus 478 i~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 478 IGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEEEecCCCcceeEecccCceeEecC
Confidence 889999976 899999999999997
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-20 Score=198.73 Aligned_cols=304 Identities=15% Similarity=0.240 Sum_probs=204.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccccccc-ceEEeccCCceEEEEEecCCCEEEE-EeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRALCTMMLRHSAQVVV-GACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~-~~t~~~~~~~I~~v~f~~~~~~las-~s~D 1127 (1472)
.++.|++|.+.|++++||.||++|||++.|++|+|||+++.+... .++ +...... -.+.+.|.|+...+++ +...
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~e-Hr~~R~nve~d--hpT~V~FapDc~s~vv~~~~g 154 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKE-HRCIRQNVEYD--HPTRVVFAPDCKSVVVSVKRG 154 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhh-hhHhhccccCC--CceEEEECCCcceEEEEEccC
Confidence 467899999999999999999999999999999999999865221 121 1222221 3688999999776555 5556
Q ss_pred CcEEEEEccccccCCCccccccCcccceeec-----CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccce
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKD-----TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT 1202 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~ 1202 (1472)
.++++|....... |.. + .....++ ..+...+-.+-...+ +.++++++.|..|.+||++ |+.+.+
T Consensus 155 ~~l~vyk~~K~~d--G~~---~--~~~v~~D~~~f~~kh~v~~i~iGiA~~---~k~imsas~dt~i~lw~lk-Gq~L~~ 223 (420)
T KOG2096|consen 155 NKLCVYKLVKKTD--GSG---S--HHFVHIDNLEFERKHQVDIINIGIAGN---AKYIMSASLDTKICLWDLK-GQLLQS 223 (420)
T ss_pred CEEEEEEeeeccc--CCC---C--cccccccccccchhcccceEEEeecCC---ceEEEEecCCCcEEEEecC-Cceeee
Confidence 6799999873222 211 1 1111112 122322322333333 6799999999999999999 887776
Q ss_pred eecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCC------cccceEec-cccCCceeEEeecCCCCCccccCCCC
Q 000470 1203 LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL------VPVNSWQY-SQVCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1203 l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~------~~i~s~~~-~~~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+.. ....-+..+++|+|+++++++-.--|++|..-|+ +..+.++. +|.+.|+..+| +|+..
T Consensus 224 idt--nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF-sn~S~--------- 291 (420)
T KOG2096|consen 224 IDT--NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF-SNSST--------- 291 (420)
T ss_pred ecc--ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee-CCCcc---------
Confidence 654 3444566789999999999999899999987543 33333332 46678888888 66554
Q ss_pred EEEEEEcCCeEEEEEcCC----CeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCc
Q 000470 1276 LIYVAAGCNEVSLWNAEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t----~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1351 (1472)
.+++++-||..++||+.- ++-...++... .|.... +.
T Consensus 292 r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~---------------~pl~aa-----------------------g~- 332 (420)
T KOG2096|consen 292 RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGS---------------APLHAA-----------------------GS- 332 (420)
T ss_pred eeEEEecCCcEEEeeccceEecCCCchHhhcCC---------------cchhhc-----------------------CC-
Confidence 789999999999999852 11111111110 011110 00
Q ss_pred CCceEeccCCCCcEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHH
Q 000470 1352 LGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431 (1472)
Q Consensus 1352 ~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1431 (1472)
.++ .+..+|+|.+++.+....+.++..++++.-- ++
T Consensus 333 ~p~-RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~--------------~~----------------------------- 368 (420)
T KOG2096|consen 333 EPV-RLELSPSGDSLAVSFGSDLKVFASEDGKDYP--------------EL----------------------------- 368 (420)
T ss_pred Cce-EEEeCCCCcEEEeecCCceEEEEcccCccch--------------hH-----------------------------
Confidence 123 6778899988877777789999877654311 00
Q ss_pred hhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1432 ~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
-+.|.+.|++++ |+++|++++||+ |..++|.
T Consensus 369 -------e~~h~~~Is~is-~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 369 -------EDIHSTTISSIS-YSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred -------HHhhcCceeeEE-ecCCCcEEeeec-ceeeeee
Confidence 012999999995 999999999998 5555553
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-20 Score=198.78 Aligned_cols=255 Identities=13% Similarity=0.176 Sum_probs=182.3
Q ss_pred cccceeEEEEcC-CCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1057 HCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1057 H~~~V~~lafsp-d~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
..+.|.+|+||| ...+++.||.||+||+|+++..... .+ .....|.++|.+++|+.+|..+++|+.|+.+++||+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcc---cc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 357899999999 4557778999999999999864211 12 223457788999999999999999999999999999
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.+. ...++ ..|..++..++|-+... ...|++|++|.+|+.||+|....+.++..+ +.+.
T Consensus 102 ~S~--------------Q~~~v-~~Hd~pvkt~~wv~~~~-~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP---eRvY-- 160 (347)
T KOG0647|consen 102 ASG--------------QVSQV-AAHDAPVKTCHWVPGMN-YQCLVTGSWDKTLKFWDTRSSNPVATLQLP---ERVY-- 160 (347)
T ss_pred cCC--------------Ceeee-eecccceeEEEEecCCC-cceeEecccccceeecccCCCCeeeeeecc---ceee--
Confidence 841 12222 24566677777766521 348999999999999999999999888773 3344
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~ 1294 (1472)
+.|-....+++++.+..|.++.|+.... .+....+-.-.++++.. ..+.. ..+.|+-.|.+.+..+..+
T Consensus 161 a~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~-f~d~~---------~~alGsiEGrv~iq~id~~ 230 (347)
T KOG0647|consen 161 AADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVAC-FQDKD---------GFALGSIEGRVAIQYIDDP 230 (347)
T ss_pred ehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEE-EecCC---------ceEeeeecceEEEEecCCC
Confidence 4444567899999999999999986543 33334344445677766 44433 3488999999999988876
Q ss_pred --eEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC-CcEEEccCC
Q 000470 1295 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1371 (1472)
Q Consensus 1295 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~-g~llTgg~D 1371 (1472)
+.-..|+.+..... ..+....|++++|+|. |.|+|+|+|
T Consensus 231 ~~~~nFtFkCHR~~~~--------------------------------------~~~~VYaVNsi~FhP~hgtlvTaGsD 272 (347)
T KOG0647|consen 231 NPKDNFTFKCHRSTNS--------------------------------------VNDDVYAVNSIAFHPVHGTLVTAGSD 272 (347)
T ss_pred CccCceeEEEeccCCC--------------------------------------CCCceEEecceEeecccceEEEecCC
Confidence 22334443221000 0011236899999995 599999999
Q ss_pred CeEEEEeCCCCCC
Q 000470 1372 LKIRRWDHCSPGR 1384 (1472)
Q Consensus 1372 g~IrlWDl~~~~~ 1384 (1472)
|++.|||-+...+
T Consensus 273 Gtf~FWDkdar~k 285 (347)
T KOG0647|consen 273 GTFSFWDKDARTK 285 (347)
T ss_pred ceEEEecchhhhh
Confidence 9999999765443
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=206.54 Aligned_cols=210 Identities=16% Similarity=0.298 Sum_probs=176.5
Q ss_pred cccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEe
Q 000470 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1046 p~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s 1125 (1472)
|.+++++.|.||.-.|+.+.|+|+...++++|.|..++||...... .......|.++|+.+..+|+|.+|++++
T Consensus 249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s------~~~~~~~h~~~V~~ls~h~tgeYllsAs 322 (506)
T KOG0289|consen 249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS------EPTSSRPHEEPVTGLSLHPTGEYLLSAS 322 (506)
T ss_pred chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc------CccccccccccceeeeeccCCcEEEEec
Confidence 7789999999999999999999999999999999999999987543 3344567889999999999999999999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecC-CCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
.||+.-+.|+.... .+..... ..+..+++..|+|| |.++.+|+.||.|++||+..+..+..+.
T Consensus 323 ~d~~w~Fsd~~~g~-------------~lt~vs~~~s~v~~ts~~fHpD---gLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 323 NDGTWAFSDISSGS-------------QLTVVSDETSDVEYTSAAFHPD---GLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred CCceEEEEEccCCc-------------EEEEEeeccccceeEEeeEcCC---ceEEeccCCCceEEEEEcCCccccccCC
Confidence 99999999987311 1222222 23456788999999 8899999999999999999999888786
Q ss_pred cCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC
Q 000470 1205 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1284 (1472)
Q Consensus 1205 ~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg 1284 (1472)
+ |.++|+++.|+.+|.||++++.||.|++||||..+.++++......++..++| .+.+. ++++++.+
T Consensus 387 g--ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f-D~SGt---------~L~~~g~~- 453 (506)
T KOG0289|consen 387 G--HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF-DQSGT---------YLGIAGSD- 453 (506)
T ss_pred C--CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE-cCCCC---------eEEeecce-
Confidence 5 99999999999999999999999999999999999999998877778999988 55554 67766444
Q ss_pred eEEEEEc
Q 000470 1285 EVSLWNA 1291 (1472)
Q Consensus 1285 ~V~VWDl 1291 (1472)
+.||-.
T Consensus 454 -l~Vy~~ 459 (506)
T KOG0289|consen 454 -LQVYIC 459 (506)
T ss_pred -eEEEEE
Confidence 444443
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-20 Score=210.77 Aligned_cols=229 Identities=19% Similarity=0.222 Sum_probs=169.3
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcc-ccccccceEEeccCCceEEEEEecCCCEEEEEeC
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK-DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~-~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~ 1126 (1472)
+..-..|.+|+..|.++++.|.|..|+|||.|-+|++||...+.. ...++... ...+..|.++.|++.++.|++.+.
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~--P~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQ--PCETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccC--cccccccceeeecCCCCeEEEEec
Confidence 345567889999999999999999999999999999999998763 22333322 234456999999999999999988
Q ss_pred CCcEEEEEccccccCCCccccccCcccceeec--CCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC-cccee
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKD--TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-NTWTL 1203 (1472)
Q Consensus 1127 DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~-~~~~l 1203 (1472)
....+|+|-+... ...-.-|-.-++-+. ..|-..+++-+|+|.+ .+.+++++.||++++||+...+ ....+
T Consensus 235 ~aqakl~DRdG~~----~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~--k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 235 SAQAKLLDRDGFE----IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN--KEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred CcceeEEccCCce----eeeeeccchhhhhhhccCCceeeeeccccccCc--ccceEEecCCCcEEEEecCCchhheeEE
Confidence 8899999876211 001111112222222 2355677888999996 4599999999999999997643 22333
Q ss_pred ec---CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--ccceEeccccC--CceeEEeecCCCCCccccCCCCE
Q 000470 1204 KA---IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC--PIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1204 ~~---~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~--~i~s~~~~~~~--~I~~l~~~~p~~~~~~~~~~~~~ 1276 (1472)
+. .+..-.+++.+|+|+|.|+++|..||.|.+||.+... +...+...|.. .|+++.| ++++ ++
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F-S~dg---------~~ 378 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF-SYDG---------NY 378 (641)
T ss_pred eeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe-cccc---------ch
Confidence 32 2234468999999999999999999999999986543 33334444544 7999988 6655 48
Q ss_pred EEEEEcCCeEEEEEcCCC
Q 000470 1277 IYVAAGCNEVSLWNAENG 1294 (1472)
Q Consensus 1277 l~vas~dg~V~VWDl~t~ 1294 (1472)
+++-+.|+.++|||++..
T Consensus 379 LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 379 LLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred hhhccCCCceeeeecccc
Confidence 999999999999999864
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-20 Score=218.12 Aligned_cols=258 Identities=18% Similarity=0.245 Sum_probs=206.8
Q ss_pred CCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEec-cCCceEEEEEecCCC
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~-~~~~I~~v~f~~~~~ 1119 (1472)
-.|+. .|....-..-++..|+++.|+++|.+||.|-.+|+|.|||.....+. .++.+ |..+|-+++|. +.
T Consensus 200 ylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~------~~~~~~h~~rvg~laW~--~~ 271 (484)
T KOG0305|consen 200 YLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT------RTLRGSHASRVGSLAWN--SS 271 (484)
T ss_pred EEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc------ccccCCcCceeEEEecc--Cc
Confidence 36884 56644444444899999999999999999999999999999876533 34445 88899999997 77
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+.+|+.||.|..+|++... .... ...+|...|+.+.|+++ +..+++|+.|+.+.+||......
T Consensus 272 ~lssGsr~~~I~~~dvR~~~------------~~~~-~~~~H~qeVCgLkws~d---~~~lASGgnDN~~~Iwd~~~~~p 335 (484)
T KOG0305|consen 272 VLSSGSRDGKILNHDVRISQ------------HVVS-TLQGHRQEVCGLKWSPD---GNQLASGGNDNVVFIWDGLSPEP 335 (484)
T ss_pred eEEEecCCCcEEEEEEecch------------hhhh-hhhcccceeeeeEECCC---CCeeccCCCccceEeccCCCccc
Confidence 89999999999999998421 1111 24467788999999999 88999999999999999988888
Q ss_pred cceeecCCCccceEEEEEcC-CCCEEEEE--eCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGP-CGNWFVSG--SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp-~g~~LvsG--ssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~ 1276 (1472)
..++.. |.+.|..++|+| ....|++| +.|++|++||..++..+..... .+.|..|.| ++... -
T Consensus 336 ~~~~~~--H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~W-sk~~k---------E 401 (484)
T KOG0305|consen 336 KFTFTE--HTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIW-SKKYK---------E 401 (484)
T ss_pred cEEEec--cceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEE-cCCCC---------E
Confidence 877776 999999999999 55788876 4699999999999999887664 457999999 66553 4
Q ss_pred EEEEEc--CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCc
Q 000470 1277 IYVAAG--CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1277 l~vas~--dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
++++.| ++.|.||+..+.+....+. +|...|
T Consensus 402 i~sthG~s~n~i~lw~~ps~~~~~~l~-----------------------------------------------gH~~RV 434 (484)
T KOG0305|consen 402 LLSTHGYSENQITLWKYPSMKLVAELL-----------------------------------------------GHTSRV 434 (484)
T ss_pred EEEecCCCCCcEEEEeccccceeeeec-----------------------------------------------CCccee
Confidence 566554 5789999998865544443 455568
Q ss_pred eEeccCCCC-cEEEccCCCeEEEEeCCCCCC
Q 000470 1355 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1355 ~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
..++++|+| .++||+.|.++|||++-....
T Consensus 435 l~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 435 LYLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred EEEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 999999998 888999999999999876533
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-21 Score=206.64 Aligned_cols=156 Identities=20% Similarity=0.152 Sum_probs=120.1
Q ss_pred CcHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCcee
Q 000470 28 NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 106 (1472)
Q Consensus 28 gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~ 106 (1472)
|+|.+++..+ ..+++.+++.|+.||+.||+|||+++ ||+|||++.++.+++ ||.++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 7899999864 45999999999999999999999998 999999999999999 998875421
Q ss_pred eccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCCCCCchH-----HHHHHhcCCCCCc---c
Q 000470 107 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQYDPSQ---H 178 (1472)
Q Consensus 107 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~~~~~---~ 178 (1472)
....|++.|+|||.+. +..++.++||||+||++|||++|++||.... +............ .
T Consensus 62 -~~~~g~~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (176)
T smart00750 62 -EQSRVDPYFMAPEVIQ----------GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS 130 (176)
T ss_pred -ccCCCcccccChHHhc----------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc
Confidence 1124688999999875 3467889999999999999999988885432 1112111111100 0
Q ss_pred cCCCCCH--HHHHHHHHhcccCcCCCCCHHHHHHHhh
Q 000470 179 LEKIPDS--GIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 179 l~~~~~~--~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 213 (1472)
.+...+. .++++|.+||..||++||++.|+++|.+
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 1111122 6999999999999999999999999954
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-19 Score=221.28 Aligned_cols=202 Identities=13% Similarity=0.133 Sum_probs=146.5
Q ss_pred EEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC-CCEEEEEeCCCcEEEEEccccccCCCccccccCccc
Q 000470 1075 SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISD 1153 (1472)
Q Consensus 1075 SgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~ 1153 (1472)
+|+.+|.|++|+..+.. ....+.+|.+.|.+++|+|+ ++.||+|+.||+|+|||+...... ..... ..
T Consensus 49 gGG~~gvI~L~~~~r~~------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~---~~~i~--~p 117 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDES---VKEIK--DP 117 (568)
T ss_pred CCCceeEEEeeecCCCc------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcc---ccccc--cc
Confidence 36778999999986532 44567889999999999996 789999999999999999731100 00000 01
Q ss_pred ceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCCcE
Q 000470 1154 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1233 (1472)
Q Consensus 1154 ~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I 1233 (1472)
+ .....|...|.+++|+|++ ..++++++.||+|++||+++++....+. +.+.|++++|+|+|.+|++|+.||.|
T Consensus 118 ~-~~L~gH~~~V~sVaf~P~g--~~iLaSgS~DgtIrIWDl~tg~~~~~i~---~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 118 Q-CILKGHKKKISIIDWNPMN--YYIMCSSGFDSFVNIWDIENEKRAFQIN---MPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred e-EEeecCCCcEEEEEECCCC--CeEEEEEeCCCeEEEEECCCCcEEEEEe---cCCcEEEEEECCCCCEEEEEecCCEE
Confidence 1 1223456778999999983 2367899999999999999998776664 45789999999999999999999999
Q ss_pred EEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCC----eEEEEEcCC-CeEEEE
Q 000470 1234 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN----EVSLWNAEN-GSCHQV 1299 (1472)
Q Consensus 1234 ~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg----~V~VWDl~t-~~~~~~ 1299 (1472)
++||+|.+..+..+.. |...+....++. . .+++++.++++++.++ +|.+||+++ ++++..
T Consensus 192 rIwD~Rsg~~i~tl~g-H~g~~~s~~v~~-~----~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~ 256 (568)
T PTZ00420 192 HIIDPRKQEIASSFHI-HDGGKNTKNIWI-D----GLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVT 256 (568)
T ss_pred EEEECCCCcEEEEEec-ccCCceeEEEEe-e----eEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEE
Confidence 9999999988877654 444443332211 0 0123345778877663 799999985 444433
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=218.47 Aligned_cols=263 Identities=15% Similarity=0.268 Sum_probs=206.4
Q ss_pred cccccee---EEEEc-CCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEE
Q 000470 1056 EHCSAVN---EIAIS-HDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1131 (1472)
Q Consensus 1056 ~H~~~V~---~lafs-pd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~ 1131 (1472)
.|...|+ .+..+ |.+++|.|||.||++++|+.........-.....+..|..+|.++..+.+++.|++||.|-+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4556666 44444 4677899999999999999876443222223556778999999999999999999999999999
Q ss_pred EEEccccccCCCccccccCcccceeecCCCCcEEEEEEe-cCCCCCceEEEEEeCCCeEEEEeCCCCC--ccceeec---
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY-NTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKA--- 1205 (1472)
Q Consensus 1132 vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~d~~s~~~L~~at~dg~I~iwDlrt~~--~~~~l~~--- 1205 (1472)
+|+... . + .-+......|..-|.|+++ ..+ ...+++|+-|+.|.+||+.++. .+.++.+
T Consensus 99 ~W~~~~-~----------~-~~c~stir~H~DYVkcla~~ak~---~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 99 VWNAHK-D----------N-TFCMSTIRTHKDYVKCLAYIAKN---NELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred Eeeccc-C----------c-chhHhhhhcccchheeeeecccC---ceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 999872 1 0 0112223356677888877 444 5689999999999999999873 3322221
Q ss_pred ---C-CCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEE
Q 000470 1206 ---I-PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1281 (1472)
Q Consensus 1206 ---~-~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas 1281 (1472)
. ++...|.+++..+.|..+++|+..+.|++||.|+...+..++ +|..-|..+.. .++ |..+++++
T Consensus 164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~-~dD---------Gt~~ls~s 232 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLV-NDD---------GTRLLSAS 232 (735)
T ss_pred ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEE-cCC---------CCeEeecC
Confidence 1 466789999999999999999999999999999999988888 67778888877 554 45899999
Q ss_pred cCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCC
Q 000470 1282 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1361 (1472)
Q Consensus 1282 ~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p 1361 (1472)
.||+|++||+...+|+.++..+.. +|+++..+|
T Consensus 233 SDgtIrlWdLgqQrCl~T~~vH~e-----------------------------------------------~VWaL~~~~ 265 (735)
T KOG0308|consen 233 SDGTIRLWDLGQQRCLATYIVHKE-----------------------------------------------GVWALQSSP 265 (735)
T ss_pred CCceEEeeeccccceeeeEEeccC-----------------------------------------------ceEEEeeCC
Confidence 999999999999999999875433 688888887
Q ss_pred CC-cEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000470 1362 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGP 1391 (1472)
Q Consensus 1362 ~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~ 1391 (1472)
+- .+.+||.||.|..=|+.++..+..++..
T Consensus 266 sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~ 296 (735)
T KOG0308|consen 266 SFTHVYSGGRDGNIYRTDLRNPAKSTLICKE 296 (735)
T ss_pred CcceEEecCCCCcEEecccCCchhheEeecC
Confidence 65 7889999999999999998777666654
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=209.67 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=200.9
Q ss_pred CCcccc-c--ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCC
Q 000470 1042 SGWRPR-G--ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p~-G--~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
..|+-- + .++.+|.|--++|+++.|.++++.++++|.|+.+++|++.... .+.++.+|...|+++.|....
T Consensus 200 k~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r------~~~TLsGHtdkVt~ak~~~~~ 273 (459)
T KOG0288|consen 200 KLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR------LRHTLSGHTDKVTAAKFKLSH 273 (459)
T ss_pred hhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchh------hhhhhcccccceeeehhhccc
Confidence 468843 2 3788999999999999999999999999999999999998754 667888999999999998877
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
..+++|+.|.+|++||+.. .. +.+.+.. +..+..+..++ ..++++-.|++|++||+|+..
T Consensus 274 ~~vVsgs~DRtiK~WDl~k-~~------------C~kt~l~--~S~cnDI~~~~-----~~~~SgH~DkkvRfwD~Rs~~ 333 (459)
T KOG0288|consen 274 SRVVSGSADRTIKLWDLQK-AY------------CSKTVLP--GSQCNDIVCSI-----SDVISGHFDKKVRFWDIRSAD 333 (459)
T ss_pred cceeeccccchhhhhhhhh-hh------------eeccccc--cccccceEecc-----eeeeecccccceEEEeccCCc
Confidence 7799999999999999973 11 1111111 11112222222 277888899999999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc---cCCceeEEeecCCCCCccccCCCC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ---VCPIEKMCLFVPPPNAAVSTTARP 1275 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~---~~~I~~l~~~~p~~~~~~~~~~~~ 1275 (1472)
+....+. +|.|+++..+++|..+++++.|.++.+.|+|+......+.... .+..++++| +|+ +.
T Consensus 334 ~~~sv~~---gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf-Spd---------~~ 400 (459)
T KOG0288|consen 334 KTRSVPL---GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF-SPD---------GS 400 (459)
T ss_pred eeeEeec---CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE-CCC---------Cc
Confidence 8888776 6799999999999999999999999999999987766665432 223555555 554 55
Q ss_pred EEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCce
Q 000470 1276 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1355 (1472)
Q Consensus 1276 ~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1355 (1472)
++++|+.||.|.||++.+++|..++..... .++|+
T Consensus 401 YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s---------------------------------------------~~aI~ 435 (459)
T KOG0288|consen 401 YVAAGSADGSVYIWSVFTGKLEKVLSLSTS---------------------------------------------NAAIT 435 (459)
T ss_pred eeeeccCCCcEEEEEccCceEEEEeccCCC---------------------------------------------CcceE
Confidence 999999999999999999999888863221 12699
Q ss_pred EeccCCCC-cEEEccCCCeEEEE
Q 000470 1356 SLLPLPGG-DLLTGGTDLKIRRW 1377 (1472)
Q Consensus 1356 sl~~~p~g-~llTgg~Dg~IrlW 1377 (1472)
+++|+|.| .+++++.++.+++|
T Consensus 436 s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 436 SLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEcCCCchhhcccCCcceEec
Confidence 99999998 78899999999999
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-21 Score=242.00 Aligned_cols=194 Identities=17% Similarity=0.237 Sum_probs=158.9
Q ss_pred CCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gI 64 (1472)
.||||+.+.+++..+...++|+||+. |+|.++++.+. .|+..+...+++||+.|++||++.++
T Consensus 360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~ 439 (609)
T KOG0200|consen 360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC 439 (609)
T ss_pred CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 59999999999999999999999999 89999998754 48899999999999999999999999
Q ss_pred eecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceee-ccCCCCc--cccCcccccccCCccccccCCCCCccc
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF-DTGGKRL--CYLAPERFYEHGGEMQVAQDAPLKPSM 141 (1472)
Q Consensus 65 vH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~-~~~~gt~--~Y~APE~~~~~~~~~~~~~~~~~t~~~ 141 (1472)
+||||-..|||++.+..+||+|||+++..... .++. ....++. .|||||.+. ...|+.++
T Consensus 440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~-------~~y~~~~~~~~LP~kWmApEsl~----------~~~ft~kS 502 (609)
T KOG0200|consen 440 VHRDLAARNVLITKNKVIKIADFGLARDHYNK-------DYYRTKSSAGTLPVKWMAPESLF----------DRVFTSKS 502 (609)
T ss_pred cchhhhhhhEEecCCCEEEEccccceeccCCC-------CceEecCCCCccceeecCHHHhc----------cCcccccc
Confidence 99999999999999999999999999854221 1122 2223323 499999775 35789999
Q ss_pred hHHHHHHHHHHHHhC-CCCCCc----hHHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 142 DIFAVGCVIAELFLE-VPFFEL----SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 142 DIwSlG~il~eLltg-~~pf~~----~~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
||||+|+++||+++. ..||.. ..+.++.+..+. ...|...++++.++++.||+.+|++||++.|+.+.+..
T Consensus 503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r--~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNR--MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 999999999999984 888864 334333333332 23566678899999999999999999999999987443
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-20 Score=207.18 Aligned_cols=278 Identities=15% Similarity=0.207 Sum_probs=206.2
Q ss_pred eeeccccccceeEEEEcCCCC-EEEEEeCCCCEEEEeCCCCccc----cccccceEEeccCCceEEEEEecC-CCEEEEE
Q 000470 1051 VAHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKD----ISFRSRLTYHLEGSRALCTMMLRH-SAQVVVG 1124 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~-~laSgS~DGtVkvWD~~~~e~~----~~~~~~~t~~~~~~~I~~v~f~~~-~~~las~ 1124 (1472)
+.+.-.|.+.|+++..-|... .+||++..|.|.|||..+-... ..+++.+++.+|...-++++|++. .-.+++|
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 344456999999999999665 7778889999999998764421 145666788888877888999985 4579999
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
+.|++|++||+..... ..+....+.+...|..+|.-++|++-. ...+++++.|+.+.+||+|+++......
T Consensus 197 ~~d~~i~lwdi~~~~~-------~~~~~~p~~~~~~h~~~VeDV~~h~~h--~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 197 SDDHTICLWDINAESK-------EDKVVDPKTIFSGHEDVVEDVAWHPLH--EDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred cCCCcEEEEecccccc-------CCccccceEEeecCCcceehhhccccc--hhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 9999999999974221 122233455666788899999999975 4599999999999999999642222233
Q ss_pred cCCCccceEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEc
Q 000470 1205 AIPEEGYVSSLVTGPC-GNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1282 (1472)
Q Consensus 1205 ~~~h~g~Itsl~~sp~-g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~ 1282 (1472)
...|.+.|+|++|+|. +..|++|++|++|.|||+|.... +.++. .|...|.++.| +|... ..+++++.
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-~H~dev~~V~W-SPh~e--------tvLASSg~ 337 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-GHEDEVFQVEW-SPHNE--------TVLASSGT 337 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceecc-CCCcceEEEEe-CCCCC--------ceeEeccc
Confidence 3459999999999994 56788999999999999998654 44444 36778999999 88754 46788888
Q ss_pred CCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCC
Q 000470 1283 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1362 (1472)
Q Consensus 1283 dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~ 1362 (1472)
|+.+.|||+..-.-.+. .... .+...+.+-.+.||...|..+.|+|+
T Consensus 338 D~rl~vWDls~ig~eq~--~eda-------------------------------~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 338 DRRLNVWDLSRIGEEQS--PEDA-------------------------------EDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CCcEEEEeccccccccC--hhhh-------------------------------ccCCcceeEEecCcccccccccCCCC
Confidence 99999999975221111 0000 00111222234688889999999998
Q ss_pred C--cEEEccCCCeEEEEeCC
Q 000470 1363 G--DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1363 g--~llTgg~Dg~IrlWDl~ 1380 (1472)
. .++|..+|+.+.+|.+.
T Consensus 385 ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 385 EPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCeEEEEecCCceEEEeecc
Confidence 7 56699999999999976
|
|
| >KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-20 Score=208.17 Aligned_cols=284 Identities=16% Similarity=0.225 Sum_probs=216.5
Q ss_pred ccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q 000470 1056 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1135 (1472)
Q Consensus 1056 ~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv 1135 (1472)
.|..-|-.+..|...+.+.||+. |+|||||+...+. ....+.+.....+..|.++...|+|+.|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~-k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGN-KSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCC-CCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 58888888999998999999988 8999999986542 111222223334567999999999999999999999999999
Q ss_pred cccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEE
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1215 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1215 (1472)
.... ..+.......+-....++.+|| .++.+++..||.|.|||++....+..|++ |.+.+.|+
T Consensus 495 AapT------------prikaeltssapaCyALa~spD---akvcFsccsdGnI~vwDLhnq~~VrqfqG--htDGascI 557 (705)
T KOG0639|consen 495 AAPT------------PRIKAELTSSAPACYALAISPD---AKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCI 557 (705)
T ss_pred cCCC------------cchhhhcCCcchhhhhhhcCCc---cceeeeeccCCcEEEEEcccceeeecccC--CCCCceeE
Confidence 7311 0111111223345567788999 67999999999999999999999999987 89999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCe
Q 000470 1216 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1295 (1472)
Q Consensus 1216 ~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~ 1295 (1472)
.++++|..|.+|+-|.+|++||+|.+..+....+ .+.|.++.. .|.+. |+++|-.++.|.|......+
T Consensus 558 dis~dGtklWTGGlDntvRcWDlregrqlqqhdF--~SQIfSLg~-cP~~d---------WlavGMens~vevlh~skp~ 625 (705)
T KOG0639|consen 558 DISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF--SSQIFSLGY-CPTGD---------WLAVGMENSNVEVLHTSKPE 625 (705)
T ss_pred EecCCCceeecCCCccceeehhhhhhhhhhhhhh--hhhheeccc-CCCcc---------ceeeecccCcEEEEecCCcc
Confidence 9999999999999999999999999887766554 346777776 66554 99999999888887665432
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeE
Q 000470 1296 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKI 1374 (1472)
Q Consensus 1296 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~I 1374 (1472)
.-+. .-|...|-++.|.+.| ++++.|.|+-+
T Consensus 626 kyql------------------------------------------------hlheScVLSlKFa~cGkwfvStGkDnlL 657 (705)
T KOG0639|consen 626 KYQL------------------------------------------------HLHESCVLSLKFAYCGKWFVSTGKDNLL 657 (705)
T ss_pred ceee------------------------------------------------cccccEEEEEEecccCceeeecCchhhh
Confidence 2111 1233468899999888 88899999999
Q ss_pred EEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeeec
Q 000470 1375 RRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL 1454 (1472)
Q Consensus 1375 rlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~ 1454 (1472)
..|.+-.+...+... -...|++. .++.
T Consensus 658 nawrtPyGasiFqsk----------------------------------------------------E~SsVlsC-DIS~ 684 (705)
T KOG0639|consen 658 NAWRTPYGASIFQSK----------------------------------------------------ESSSVLSC-DISF 684 (705)
T ss_pred hhccCccccceeecc----------------------------------------------------ccCcceee-eecc
Confidence 999765443322110 24568888 5899
Q ss_pred CCcEEEEEcCCceEEEc
Q 000470 1455 NQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1455 ~~~~LvS~s~DG~IkVW 1471 (1472)
+.++|||||-|...-||
T Consensus 685 ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 685 DDKYIVTGSGDKKATVY 701 (705)
T ss_pred CceEEEecCCCcceEEE
Confidence 99999999999776665
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.2e-21 Score=217.77 Aligned_cols=204 Identities=19% Similarity=0.170 Sum_probs=150.9
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCee
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK---------GICH 66 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~---------gIvH 66 (1472)
|.|+||++|+..-+... .++||++|-+ |+|.+||+.+ .+++.+...|+..+++||+|||+. .|+|
T Consensus 261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaH 339 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAH 339 (534)
T ss_pred ccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccc
Confidence 68999999999887655 8999999999 9999999886 489999999999999999999973 5999
Q ss_pred cCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHH
Q 000470 67 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146 (1472)
Q Consensus 67 ~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 146 (1472)
||||..||||.+++...|+|||++.... +.....+. ....||..|||||++.+.-. .. +..--.++||||+
T Consensus 340 RDlkSkNVLvK~DlTccIaDFGLAl~~~-p~~~~~d~----~~qVGT~RYMAPEvLEgain---l~-d~~Afkr~DvYam 410 (534)
T KOG3653|consen 340 RDLKSKNVLVKNDLTCCIADFGLALRLE-PGKPQGDT----HGQVGTRRYMAPEVLEGAIN---LQ-DRDAFKRIDVYAM 410 (534)
T ss_pred ccccccceEEccCCcEEeeccceeEEec-CCCCCcch----hhhhhhhhhcCHHHHhhhcc---cc-cHHHHHHHHHHHH
Confidence 9999999999999999999999998764 22222221 23678999999999864311 01 1222357999999
Q ss_pred HHHHHHHHhCCC--------CCC------------chHHHHHH---hcCCCCCcccCCC-CCHHHHHHHHHhcccCcCCC
Q 000470 147 GCVIAELFLEVP--------FFE------------LSHLLAYR---RGQYDPSQHLEKI-PDSGIRKMILHMIQLEPELR 202 (1472)
Q Consensus 147 G~il~eLltg~~--------pf~------------~~~~~~~~---~~~~~~~~~l~~~-~~~~l~~LI~~mL~~dP~~R 202 (1472)
|.|+|||++... +|. ..++..+. +........+.+. .-.-+++.+..||..||+.|
T Consensus 411 gLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeAR 490 (534)
T KOG3653|consen 411 GLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEAR 490 (534)
T ss_pred HHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhh
Confidence 999999987522 221 11222221 1111111122222 22468999999999999999
Q ss_pred CCHHHHHHHhhc
Q 000470 203 FSAESYLQNYAA 214 (1472)
Q Consensus 203 psa~elL~~~~~ 214 (1472)
.||.-+.+++..
T Consensus 491 LTA~Cv~eR~~~ 502 (534)
T KOG3653|consen 491 LTAGCVEERMAE 502 (534)
T ss_pred hhhHHHHHHHHH
Confidence 999988877543
|
|
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=210.34 Aligned_cols=243 Identities=17% Similarity=0.293 Sum_probs=186.8
Q ss_pred cceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEE-EEEec-CCCEEEEEe
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC-TMMLR-HSAQVVVGA 1125 (1472)
Q Consensus 1048 G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~-v~f~~-~~~~las~s 1125 (1472)
-++-+.+++|...|..+++. ++..+++||.||++++|+-...+ +-....+.++.+-|.+ +++.+ ++-.+++|+
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~-~~~~i~s~sRd~t~~vw~~~~~~----~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~ 78 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVT-DGVCIISGSRDGTVKVWAKKGKQ----YLETHAFEGPKGFIANSICYAESDKGRLVVGG 78 (745)
T ss_pred ceeEEEeccCccchheeEec-CCeEEeecCCCCceeeeeccCcc----cccceecccCcceeeccceeccccCcceEeec
Confidence 35678899999999888875 45589999999999999975543 2233456666666666 88876 444699999
Q ss_pred CCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeec
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205 (1472)
Q Consensus 1126 ~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~ 1205 (1472)
.|++|.+|..... .+. .....|...|++++...+ + .+++|++|.++++|-. +++...+++
T Consensus 79 ~D~~i~v~~~~~~-------------~P~-~~LkgH~snVC~ls~~~~---~-~~iSgSWD~TakvW~~--~~l~~~l~g 138 (745)
T KOG0301|consen 79 MDTTIIVFKLSQA-------------EPL-YTLKGHKSNVCSLSIGED---G-TLISGSWDSTAKVWRI--GELVYSLQG 138 (745)
T ss_pred ccceEEEEecCCC-------------Cch-hhhhccccceeeeecCCc---C-ceEecccccceEEecc--hhhhcccCC
Confidence 9999999988631 111 122346666777765554 2 5999999999999976 455555655
Q ss_pred CCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1206 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1206 ~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
|...|++++.-|++ .++||+.|.+|++|.- ++.++++.. |..-|+.+++ .+.. .+++++.||.
T Consensus 139 --H~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g-HtD~VRgL~v-l~~~----------~flScsNDg~ 201 (745)
T KOG0301|consen 139 --HTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG-HTDCVRGLAV-LDDS----------HFLSCSNDGS 201 (745)
T ss_pred --cchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc-chhheeeeEE-ecCC----------CeEeecCCce
Confidence 99999999999988 8999999999999985 677777776 7778999988 5543 3789999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec-cCCCCc
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL-PLPGGD 1364 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~-~~p~g~ 1364 (1472)
|+.|++ +|+|+..+.. |..-|+++. .++++.
T Consensus 202 Ir~w~~-~ge~l~~~~g-----------------------------------------------htn~vYsis~~~~~~~ 233 (745)
T KOG0301|consen 202 IRLWDL-DGEVLLEMHG-----------------------------------------------HTNFVYSISMALSDGL 233 (745)
T ss_pred EEEEec-cCceeeeeec-----------------------------------------------cceEEEEEEecCCCCe
Confidence 999999 7888776652 333688888 556678
Q ss_pred EEEccCCCeEEEEeCC
Q 000470 1365 LLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~ 1380 (1472)
++|+|+||++|+|+..
T Consensus 234 Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 234 IVSTGEDRTLRIWKKD 249 (745)
T ss_pred EEEecCCceEEEeecC
Confidence 9999999999999976
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-18 Score=179.30 Aligned_cols=260 Identities=18% Similarity=0.236 Sum_probs=195.4
Q ss_pred ceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecC----CCEEEEE
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH----SAQVVVG 1124 (1472)
Q Consensus 1049 ~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~----~~~las~ 1124 (1472)
.+-..-+.|++.|+|.+|||+|++++|||.|.+||+--.....++.+ -..+.+..|.+.|.+++|..+ +..++++
T Consensus 80 v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~-g~dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 80 VLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT-GHDLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred EEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc-CcceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 34445567999999999999999999999999999987654333222 245677888999999999864 4566665
Q ss_pred eCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceee
Q 000470 1125 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1125 s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
+. |-.+||-.+. .+ | ..+..+..+.|.++..-.|+.- ++++|+.|.+|++||+|...++.++.
T Consensus 159 ga-gdc~iy~tdc-~~--g--------~~~~a~sghtghilalyswn~~-----m~~sgsqdktirfwdlrv~~~v~~l~ 221 (350)
T KOG0641|consen 159 GA-GDCKIYITDC-GR--G--------QGFHALSGHTGHILALYSWNGA-----MFASGSQDKTIRFWDLRVNSCVNTLD 221 (350)
T ss_pred CC-CcceEEEeec-CC--C--------CcceeecCCcccEEEEEEecCc-----EEEccCCCceEEEEeeeccceeeecc
Confidence 53 4444444432 11 1 1234455677888888878654 99999999999999999999998887
Q ss_pred cCCCc-----cceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1205 AIPEE-----GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1205 ~~~h~-----g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
+..|. ..|.+++++|.|+.|++|-.|....+||+|-+.++..+. +|...|.++.| +|... ++++
T Consensus 222 ~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrf-sp~a~---------yllt 290 (350)
T KOG0641|consen 222 NDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRF-SPGAH---------YLLT 290 (350)
T ss_pred CcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEe-CCCce---------EEEE
Confidence 76554 469999999999999999999999999999999998875 58888999998 77654 8999
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
++.|..|++-|+.. .....+.. -+ ...|...+-.+.|
T Consensus 291 ~syd~~ikltdlqg-dla~el~~--------------~v----------------------------v~ehkdk~i~~rw 327 (350)
T KOG0641|consen 291 CSYDMKIKLTDLQG-DLAHELPI--------------MV----------------------------VAEHKDKAIQCRW 327 (350)
T ss_pred ecccceEEEeeccc-chhhcCce--------------EE----------------------------EEeccCceEEEEe
Confidence 99999999999863 22111100 00 0112224567889
Q ss_pred CCCC-cEEEccCCCeEEEEeCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~ 1380 (1472)
+|.. .+++.+.|+++.+|-+.
T Consensus 328 h~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 328 HPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cCccceeeeccCcceEEEeccC
Confidence 9988 68899999999999753
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=212.86 Aligned_cols=268 Identities=15% Similarity=0.187 Sum_probs=218.8
Q ss_pred CCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~ 1119 (1472)
-..|+- +++++.++... .+.+..|-|.++++++|...|.+.|+|+....- .-+...|.+.|++++..|++.
T Consensus 396 ikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l------~Eti~AHdgaIWsi~~~pD~~ 467 (888)
T KOG0306|consen 396 IKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASL------VETIRAHDGAIWSISLSPDNK 467 (888)
T ss_pred EEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhh------hhhhhccccceeeeeecCCCC
Confidence 457985 59999999754 888999999999999999999999999987652 223457889999999999999
Q ss_pred EEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCc
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++||.|.+|++||........+.-.+.-++...+... -..-+-++.++|| +.+|+++=-|++|++|-+.+.+-
T Consensus 468 g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe--l~ddvL~v~~Spd---gk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 468 GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE--LEDDVLCVSVSPD---GKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe--ccccEEEEEEcCC---CcEEEEEeccCeEEEEEecceee
Confidence 999999999999999874332112111221112222222 2446778899999 88999999999999999998876
Q ss_pred cceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEE
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~v 1279 (1472)
--++-+ |.-+|.|+.++|++..++|||.|..|++|-+.||.|-+++-. |...|.++.| .|... .+++
T Consensus 543 flsLYG--HkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F-~P~~~---------~FFt 609 (888)
T KOG0306|consen 543 FLSLYG--HKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQF-LPKTH---------LFFT 609 (888)
T ss_pred eeeecc--cccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEE-cccce---------eEEE
Confidence 655554 899999999999999999999999999999999999998764 7788999999 77543 7899
Q ss_pred EEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEecc
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
++-|+.|+-||-++.++.+.+. +|...|+|++.
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~-----------------------------------------------~H~~ev~cLav 642 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLD-----------------------------------------------GHHSEVWCLAV 642 (888)
T ss_pred ecCcceEEeechhhhhhheeec-----------------------------------------------cchheeeeeEE
Confidence 9999999999999988887775 23347999999
Q ss_pred CCCC-cEEEccCCCeEEEEeCCC
Q 000470 1360 LPGG-DLLTGGTDLKIRRWDHCS 1381 (1472)
Q Consensus 1360 ~p~g-~llTgg~Dg~IrlWDl~~ 1381 (1472)
.|+| +++|+|.|..||+|....
T Consensus 643 ~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 643 SPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred cCCCCeEEeccCCceeEeeeccC
Confidence 9998 888999999999998654
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-20 Score=229.65 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=138.4
Q ss_pred CCcceeeEEEEe--------CCeEEEEecccC-CcHHHHHhCC------------------------CCCCHHHHHHHHH
Q 000470 4 TPCVHKKFWQET--------DKAAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAF 50 (1472)
Q Consensus 4 pNIv~~~~~~~~--------~~~~~lV~Ey~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~ 50 (1472)
++|+++++++.. +...|||+||++ ++|.+++... ..+++..++.++.
T Consensus 237 ~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ 316 (507)
T PLN03224 237 ASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMR 316 (507)
T ss_pred hhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHH
Confidence 445777777643 356899999999 6999988642 1235667889999
Q ss_pred HHHHHHHHHHHCCCeecCCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccc
Q 000470 51 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130 (1472)
Q Consensus 51 Qll~aL~~LH~~gIvH~DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~ 130 (1472)
|++.||.|||++||+||||||+|||++.++.+||+|||+++....... .. .....+++.|+|||.+........
T Consensus 317 ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~--~~~g~~tp~Y~aPE~l~~~~~~~~ 390 (507)
T PLN03224 317 QVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----FN--PLYGMLDPRYSPPEELVMPQSCPR 390 (507)
T ss_pred HHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----cC--ccccCCCcceeChhhhcCCCCCCc
Confidence 999999999999999999999999999999999999999864421110 00 112234788999998863221100
Q ss_pred c------------ccCCCCCccchHHHHHHHHHHHHhCC-CCCCchHH------------HHHHhcC-CCCCcccCCCCC
Q 000470 131 V------------AQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHL------------LAYRRGQ-YDPSQHLEKIPD 184 (1472)
Q Consensus 131 ~------------~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~------------~~~~~~~-~~~~~~l~~~~~ 184 (1472)
. ........+.||||+||++|+|+++. +||..... ..++... ...........+
T Consensus 391 ~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s 470 (507)
T PLN03224 391 APAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNK 470 (507)
T ss_pred cchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccC
Confidence 0 00011223579999999999999984 46642111 1111100 011112233456
Q ss_pred HHHHHHHHHhcccCc---CCCCCHHHHHHH
Q 000470 185 SGIRKMILHMIQLEP---ELRFSAESYLQN 211 (1472)
Q Consensus 185 ~~l~~LI~~mL~~dP---~~Rpsa~elL~~ 211 (1472)
+..++|+.+||..+| .+|+|++|+|+|
T Consensus 471 ~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 471 EAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred hHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 789999999999876 689999999999
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.5e-21 Score=227.85 Aligned_cols=198 Identities=14% Similarity=0.093 Sum_probs=160.8
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEcc
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~ 78 (1472)
|.|||+++++++..... ..||+||++ |+|.|+++. +..+...+...|.+||++||.|||.++++||||-..||||.+
T Consensus 755 ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks 833 (1177)
T KOG1025|consen 755 LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS 833 (1177)
T ss_pred CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC
Confidence 58999999999998876 889999999 899999986 567999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 157 (1472)
-+++|++|||+++.....+ ..+......-.+.|||=|.+. ...|+.++||||+|+++||++| |.
T Consensus 834 P~hvkitdfgla~ll~~d~-----~ey~~~~gK~pikwmale~i~----------~~~~thqSDVWsfGVtiWElmTFGa 898 (1177)
T KOG1025|consen 834 PNHVKITDFGLAKLLAPDE-----KEYSAPGGKVPIKWMALESIR----------IRKYTHQSDVWSFGVTIWELMTFGA 898 (1177)
T ss_pred CCeEEEEecchhhccCccc-----ccccccccccCcHHHHHHHhh----------ccCCCchhhhhhhhhhHHHHHhcCC
Confidence 9999999999998663222 222233333456688888664 4589999999999999999998 66
Q ss_pred CCCCchHHHHHHhcCCC-CCcccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHHhhc
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~pf~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 214 (1472)
.|+..-...++...... .+..-|.+.+.++.-++.+||..|++.||+++++...+..
T Consensus 899 ~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 899 KPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred CccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 66665444443322111 1234567888899999999999999999999999988653
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-19 Score=191.71 Aligned_cols=269 Identities=19% Similarity=0.260 Sum_probs=193.8
Q ss_pred EEEEeCCCCEEEEeCCCCc------cccccccceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccc
Q 000470 1073 FVSASDDSTVKVWDSRKLE------KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVE 1146 (1472)
Q Consensus 1073 laSgS~DGtVkvWD~~~~e------~~~~~~~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~ 1146 (1472)
|+.|+....+-=+++.... +..++.+...+..|.++|++++. ++.++|+||.|.+|+|||+.... ..+
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~-qlg--- 77 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRK-QLG--- 77 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchh-hhc---
Confidence 5556666555555443211 22334567788899999999987 57899999999999999997311 111
Q ss_pred cccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEE
Q 000470 1147 KYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS 1226 (1472)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~Lvs 1226 (1472)
....|...++++.|.+... ...|++|+.||.|.+||.....++.+++. |.+.|+.++++|.|..-++
T Consensus 78 ----------~ll~HagsitaL~F~~~~S-~shLlS~sdDG~i~iw~~~~W~~~~slK~--H~~~Vt~lsiHPS~KLALs 144 (362)
T KOG0294|consen 78 ----------ILLSHAGSITALKFYPPLS-KSHLLSGSDDGHIIIWRVGSWELLKSLKA--HKGQVTDLSIHPSGKLALS 144 (362)
T ss_pred ----------ceeccccceEEEEecCCcc-hhheeeecCCCcEEEEEcCCeEEeeeecc--cccccceeEecCCCceEEE
Confidence 1224556677778887632 34899999999999999999999999987 8888999999999999999
Q ss_pred EeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCC
Q 000470 1227 GSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYD 1306 (1472)
Q Consensus 1227 GssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~ 1306 (1472)
-+.|+.+++|||-.++.-......+. -+.+.| .|.+. +++++ +.+.|-+|.+++.+....+. .
T Consensus 145 Vg~D~~lr~WNLV~Gr~a~v~~L~~~--at~v~w-~~~Gd---------~F~v~-~~~~i~i~q~d~A~v~~~i~---~- 207 (362)
T KOG0294|consen 145 VGGDQVLRTWNLVRGRVAFVLNLKNK--ATLVSW-SPQGD---------HFVVS-GRNKIDIYQLDNASVFREIE---N- 207 (362)
T ss_pred EcCCceeeeehhhcCccceeeccCCc--ceeeEE-cCCCC---------EEEEE-eccEEEEEecccHhHhhhhh---c-
Confidence 99999999999987765444443322 223555 55443 44444 45668899887643321111 0
Q ss_pred CCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCCcEEEccCCCeEEEEeCCCCCCce
Q 000470 1307 GDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSY 1386 (1472)
Q Consensus 1307 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~llTgg~Dg~IrlWDl~~~~~s~ 1386 (1472)
...+.|+.|...+.+++|++|+.|++||.++.....
T Consensus 208 --------------------------------------------~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~ 243 (362)
T KOG0294|consen 208 --------------------------------------------PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLT 243 (362)
T ss_pred --------------------------------------------cccceeeeecCCceEEEecCCceEEEeccCCCccce
Confidence 013567777777799999999999999987643322
Q ss_pred EEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCccceeEEeeee-cCCcEEEEEcCC
Q 000470 1387 CICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK-LNQRLLISSSRD 1465 (1472)
Q Consensus 1387 vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~-~~~~~LvS~s~D 1465 (1472)
.+ .+|...|-+++.+. +.+.+|+|+|.|
T Consensus 244 ~~---------------------------------------------------~AH~~RVK~i~~~~~~~~~~lvTaSSD 272 (362)
T KOG0294|consen 244 EF---------------------------------------------------LAHENRVKDIASYTNPEHEYLVTASSD 272 (362)
T ss_pred ee---------------------------------------------------ecchhheeeeEEEecCCceEEEEeccC
Confidence 11 23999999997554 558999999999
Q ss_pred ceEEEcC
Q 000470 1466 GAIKVWK 1472 (1472)
Q Consensus 1466 G~IkVWk 1472 (1472)
|.|+|||
T Consensus 273 G~I~vWd 279 (362)
T KOG0294|consen 273 GFIKVWD 279 (362)
T ss_pred ceEEEEE
Confidence 9999997
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-21 Score=203.82 Aligned_cols=189 Identities=16% Similarity=0.113 Sum_probs=145.7
Q ss_pred CCCcceeeE-EEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC-
Q 000470 3 STPCVHKKF-WQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW- 79 (1472)
Q Consensus 3 HpNIv~~~~-~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~- 79 (1472)
|.||+.-|+ .|++.+.+++++||++ |+|..-+...+ +.|...+.++.|+++||.|||++++||||||.|||||-..
T Consensus 80 H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d 158 (378)
T KOG1345|consen 80 HQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD 158 (378)
T ss_pred chhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC
Confidence 789998554 6788899999999999 99999887755 8899999999999999999999999999999999999533
Q ss_pred -CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 000470 80 -NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 -~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~ 158 (1472)
-++||||||...+....- ........|.|||...... ...-...+..|||.||+++|.+++|++
T Consensus 159 f~rvKlcDFG~t~k~g~tV----------~~~~~~~~y~~pe~~~~~~-----ne~~~~~ps~D~WqfGIi~f~cltG~~ 223 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTV----------KYLEYVNNYHAPELCDTVV-----NEKLVVNPSTDIWQFGIIFFYCLTGKF 223 (378)
T ss_pred ccEEEeeecccccccCcee----------hhhhhhcccCCcHHHhhcc-----ccceEecccccchheeeeeeeeecCCC
Confidence 379999999887653221 1111244589999775432 224456889999999999999999999
Q ss_pred CCCch--------HHHHHHhcCCCCCcccCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000470 159 FFELS--------HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207 (1472)
Q Consensus 159 pf~~~--------~~~~~~~~~~~~~~~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 207 (1472)
||... +..++..+.....+......++.+..+.++-|..+|++|-...+
T Consensus 224 PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~ 280 (378)
T KOG1345|consen 224 PWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT 280 (378)
T ss_pred cchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH
Confidence 99632 23334444444334444566788999999999999999943333
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=194.73 Aligned_cols=269 Identities=19% Similarity=0.305 Sum_probs=201.4
Q ss_pred CCCCccc-ccceeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeC------CC--------Cc-------------
Q 000470 1040 PDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDS------RK--------LE------------- 1091 (1472)
Q Consensus 1040 ~~~~W~p-~G~lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~------~~--------~e------------- 1091 (1472)
...+|.. .|.+++.+.||.+.||+|+|++.+.+++|||.|++..||.. .. .|
T Consensus 171 TA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~ 250 (481)
T KOG0300|consen 171 TARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDT 250 (481)
T ss_pred ceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccc
Confidence 3568994 69999999999999999999999999999999999999972 11 00
Q ss_pred ----ccc--ccc-cceEEeccCCceEEEEEecCCCEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcE
Q 000470 1092 ----KDI--SFR-SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAI 1164 (1472)
Q Consensus 1092 ----~~~--~~~-~~~t~~~~~~~I~~v~f~~~~~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1164 (1472)
+.. +.+ +...+.+|.+.|.+..|...++.+++++.|.+-.+||+++. .+.....+|...
T Consensus 251 d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--------------e~v~~LtGHd~E 316 (481)
T KOG0300|consen 251 DSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--------------EVVNILTGHDSE 316 (481)
T ss_pred ccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--------------ceeccccCcchh
Confidence 000 112 34567788889999999999999999999999999999851 112223345555
Q ss_pred EEEEEecCCCCCceEEEEEeCCCeEEEEeCCCC-CccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-
Q 000470 1165 VTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV- 1242 (1472)
Q Consensus 1165 v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~-~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~- 1242 (1472)
++.++-+|. +.++++++.|.+.++||.|-. ..+..+++ |...|+++.|..+ ..+++|+.|.+|++||||+..
T Consensus 317 LtHcstHpt---QrLVvTsSrDtTFRLWDFReaI~sV~VFQG--HtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRs 390 (481)
T KOG0300|consen 317 LTHCSTHPT---QRLVVTSSRDTTFRLWDFREAIQSVAVFQG--HTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRS 390 (481)
T ss_pred ccccccCCc---ceEEEEeccCceeEeccchhhcceeeeecc--cccceeEEEEecC-CceeecCCCceEEEeeeccccC
Confidence 666667787 778999999999999999932 22345555 9999999999865 468899999999999999754
Q ss_pred ccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCC
Q 000470 1243 PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS 1322 (1472)
Q Consensus 1243 ~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 1322 (1472)
++.++.. .++++++.. +- .++.|+.--.+..|++||+.. ..+..+. .
T Consensus 391 plATIRt--dS~~NRvav-s~---------g~~iIAiPhDNRqvRlfDlnG-~RlaRlP--------------------r 437 (481)
T KOG0300|consen 391 PLATIRT--DSPANRVAV-SK---------GHPIIAIPHDNRQVRLFDLNG-NRLARLP--------------------R 437 (481)
T ss_pred cceeeec--CCccceeEe-ec---------CCceEEeccCCceEEEEecCC-CccccCC--------------------c
Confidence 4555553 456777766 22 245667777778899999863 3221111 0
Q ss_pred CCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC---cEEEccCCCeEEEEeCCCCC
Q 000470 1323 SRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPG 1383 (1472)
Q Consensus 1323 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g---~llTgg~Dg~IrlWDl~~~~ 1383 (1472)
. ...+|...|.|++|..+. .|+|+|-|+++.=|++..+.
T Consensus 438 t----------------------sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 438 T----------------------SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred c----------------------cccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 0 114566689999997543 79999999999999988764
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-19 Score=192.05 Aligned_cols=244 Identities=15% Similarity=0.205 Sum_probs=186.2
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEEecCCC--EEEEEeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA--QVVVGACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f~~~~~--~las~s~D 1127 (1472)
.+-+++.|.++|+++|++ +.++||||.|-+|+|||.++.. .......|.+.|+++.|.++.. +|++|+.|
T Consensus 35 ~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~------qlg~ll~HagsitaL~F~~~~S~shLlS~sdD 106 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK------QLGILLSHAGSITALKFYPPLSKSHLLSGSDD 106 (362)
T ss_pred ccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh------hhcceeccccceEEEEecCCcchhheeeecCC
Confidence 456788999999999994 8999999999999999998754 3344556788899999998764 89999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|.|.+||+.. .........|...|+.++.+|. +.+-++.+.|+.++.||+-.|+....+..
T Consensus 107 G~i~iw~~~~--------------W~~~~slK~H~~~Vt~lsiHPS---~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-- 167 (362)
T KOG0294|consen 107 GHIIIWRVGS--------------WELLKSLKAHKGQVTDLSIHPS---GKLALSVGGDQVLRTWNLVRGRVAFVLNL-- 167 (362)
T ss_pred CcEEEEEcCC--------------eEEeeeecccccccceeEecCC---CceEEEEcCCceeeeehhhcCccceeecc--
Confidence 9999999972 1112222334444899999998 78889999999999999999998877664
Q ss_pred CccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~ 1287 (1472)
....+.+.|+|.|.+++.+..++ |-+|-+...........+ .++.++.| . ++..+++|+.++.|+
T Consensus 168 -~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~--~r~l~~~~-l----------~~~~L~vG~d~~~i~ 232 (362)
T KOG0294|consen 168 -KNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP--KRILCATF-L----------DGSELLVGGDNEWIS 232 (362)
T ss_pred -CCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc--ccceeeee-c----------CCceEEEecCCceEE
Confidence 23445699999999998888764 889998877666655543 23444444 1 234789999999999
Q ss_pred EEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccC--CCC-c
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL--PGG-D 1364 (1472)
Q Consensus 1288 VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~--p~g-~ 1364 (1472)
+||..++.+...+.. |...|-++.+- |.+ +
T Consensus 233 ~~D~ds~~~~~~~~A-----------------------------------------------H~~RVK~i~~~~~~~~~~ 265 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLA-----------------------------------------------HENRVKDIASYTNPEHEY 265 (362)
T ss_pred EeccCCCccceeeec-----------------------------------------------chhheeeeEEEecCCceE
Confidence 999988766555542 22245555532 344 7
Q ss_pred EEEccCCCeEEEEeCCCC
Q 000470 1365 LLTGGTDLKIRRWDHCSP 1382 (1472)
Q Consensus 1365 llTgg~Dg~IrlWDl~~~ 1382 (1472)
|+|+|+||.|++||++..
T Consensus 266 lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 266 LVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEeccCceEEEEEcccc
Confidence 889999999999999765
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.2e-18 Score=173.96 Aligned_cols=304 Identities=19% Similarity=0.260 Sum_probs=216.9
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCc------cccccccc---eEEeccCCceEEEEEecCCCE
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------KDISFRSR---LTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e------~~~~~~~~---~t~~~~~~~I~~v~f~~~~~~ 1120 (1472)
.|..| +...+|.+++|+|.|.+.+.||...+.+|-...... ......+. ..-..|.+.|.|.+|+|.|..
T Consensus 25 ~i~~l-~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gel 103 (350)
T KOG0641|consen 25 AINIL-EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGEL 103 (350)
T ss_pred EEEEe-cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCe
Confidence 44444 456789999999999999999999999987543221 11111111 122346788999999999999
Q ss_pred EEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCC-ceEEEEE-eCCCeEEEEeCCCCC
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-SHMFMYS-TQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1121 las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s-~~~L~~a-t~dg~I~iwDlrt~~ 1198 (1472)
+++|+.|.+|++........ ...+ .-..++-+.| .+.-++|-.+..+ +.+|+++ ..|..|++=|..+|+
T Consensus 104 iatgsndk~ik~l~fn~dt~------~~~g--~dle~nmhdg-tirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~ 174 (350)
T KOG0641|consen 104 IATGSNDKTIKVLPFNADTC------NATG--HDLEFNMHDG-TIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ 174 (350)
T ss_pred EEecCCCceEEEEecccccc------cccC--cceeeeecCC-ceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC
Confidence 99999999999987752111 1111 1112222333 4444455433222 4566664 457889999999999
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccc------cCCceeEEeecCCCCCccccC
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ------VCPIEKMCLFVPPPNAAVSTT 1272 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~------~~~I~~l~~~~p~~~~~~~~~ 1272 (1472)
....+.+ |.|-|.++ ++-+|-.+++|+.|.+|+.||+|-..+++.+.... .+.|..++. .|.
T Consensus 175 ~~~a~sg--htghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v-dps-------- 242 (350)
T KOG0641|consen 175 GFHALSG--HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV-DPS-------- 242 (350)
T ss_pred cceeecC--CcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE-CCC--------
Confidence 9888876 88888776 33457789999999999999999988887765321 235666666 555
Q ss_pred CCCEEEEEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcC
Q 000470 1273 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1352 (1472)
Q Consensus 1273 ~~~~l~vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1352 (1472)
|+++++|-.|....+||++.+..++.|..+ ..
T Consensus 243 -grll~sg~~dssc~lydirg~r~iq~f~ph-----------------------------------------------sa 274 (350)
T KOG0641|consen 243 -GRLLASGHADSSCMLYDIRGGRMIQRFHPH-----------------------------------------------SA 274 (350)
T ss_pred -cceeeeccCCCceEEEEeeCCceeeeeCCC-----------------------------------------------cc
Confidence 458899999999999999998888777532 23
Q ss_pred CceEeccCCCC-cEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHH
Q 000470 1353 GIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431 (1472)
Q Consensus 1353 ~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1431 (1472)
.|+|+.|+|.. +++||+.|.+|++=|++.--. . .....++.|
T Consensus 275 dir~vrfsp~a~yllt~syd~~ikltdlqgdla-~--------------------el~~~vv~e---------------- 317 (350)
T KOG0641|consen 275 DIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA-H--------------------ELPIMVVAE---------------- 317 (350)
T ss_pred ceeEEEeCCCceEEEEecccceEEEeecccchh-h--------------------cCceEEEEe----------------
Confidence 69999999987 788999999999999863210 0 011234444
Q ss_pred hhhhcCCCCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000470 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1432 ~~~~~~~~~~H~d~I~~va~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
|.|.+-.+ .|++..--++|.|.|.++-+|
T Consensus 318 ----------hkdk~i~~-rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 318 ----------HKDKAIQC-RWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred ----------ccCceEEE-EecCccceeeeccCcceEEEe
Confidence 88877777 488887778999999999999
|
|
| >KOG0646 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.3e-19 Score=199.17 Aligned_cols=279 Identities=19% Similarity=0.257 Sum_probs=196.2
Q ss_pred EEeCC-CCEEEEeCCCCccccccccceEEeccCC-ceEEEEEecCCCEEEEEe-CCCcEEEEEccccccCCCccccccCc
Q 000470 1075 SASDD-STVKVWDSRKLEKDISFRSRLTYHLEGS-RALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGI 1151 (1472)
Q Consensus 1075 SgS~D-GtVkvWD~~~~e~~~~~~~~~t~~~~~~-~I~~v~f~~~~~~las~s-~DG~I~vwdv~~~~~~~~~~~~~~~~ 1151 (1472)
++|.| +++.+||++++. ...+|.+... .-.++... +..+++++. .-..|++|.+.....
T Consensus 12 ssS~d~~~~~~~dl~TGt------~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~----------- 73 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGT------SLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQ----------- 73 (476)
T ss_pred ccCCCCcceeEEecCCCc------eeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhh-----------
Confidence 34444 559999999987 4445544321 11222222 234555544 456799998862110
Q ss_pred ccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCCccceEEEEEcCCCCEEEEEeCCC
Q 000470 1152 SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG 1231 (1472)
Q Consensus 1152 ~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG 1231 (1472)
.. ...-...++.++.-+|+ |.+|+.|+..|.|++|.+.+|..+..+.. |+..|||+.|+-||.+|++|+.||
T Consensus 74 --~~-q~~v~Pg~v~al~s~n~---G~~l~ag~i~g~lYlWelssG~LL~v~~a--HYQ~ITcL~fs~dgs~iiTgskDg 145 (476)
T KOG0646|consen 74 --VV-QYIVLPGPVHALASSNL---GYFLLAGTISGNLYLWELSSGILLNVLSA--HYQSITCLKFSDDGSHIITGSKDG 145 (476)
T ss_pred --hh-hhcccccceeeeecCCC---ceEEEeecccCcEEEEEeccccHHHHHHh--hccceeEEEEeCCCcEEEecCCCc
Confidence 00 11123346778878887 77899999999999999999999988855 999999999999999999999999
Q ss_pred cEEEEECCC---------CcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCeEEEEEec
Q 000470 1232 VLTLWDLRF---------LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRT 1302 (1472)
Q Consensus 1232 ~I~lWDlr~---------~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~VWDl~t~~~~~~l~~ 1302 (1472)
.|.+|++-+ -.++..|.. |.-+|+.+.. .+.+. ...+++++.|.++++||+..|.....+..
T Consensus 146 ~V~vW~l~~lv~a~~~~~~~p~~~f~~-HtlsITDl~i-g~Gg~-------~~rl~TaS~D~t~k~wdlS~g~LLlti~f 216 (476)
T KOG0646|consen 146 AVLVWLLTDLVSADNDHSVKPLHIFSD-HTLSITDLQI-GSGGT-------NARLYTASEDRTIKLWDLSLGVLLLTITF 216 (476)
T ss_pred cEEEEEEEeecccccCCCccceeeecc-CcceeEEEEe-cCCCc-------cceEEEecCCceEEEEEeccceeeEEEec
Confidence 999998743 345566664 6668888877 44432 35799999999999999999977666541
Q ss_pred ccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC-cEEEccCCCeEEEEeCCC
Q 000470 1303 ANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCS 1381 (1472)
Q Consensus 1303 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~llTgg~Dg~IrlWDl~~ 1381 (1472)
. ..+.+++.+|.+ .+..|++||.|.+.++..
T Consensus 217 p------------------------------------------------~si~av~lDpae~~~yiGt~~G~I~~~~~~~ 248 (476)
T KOG0646|consen 217 P------------------------------------------------SSIKAVALDPAERVVYIGTEEGKIFQNLLFK 248 (476)
T ss_pred C------------------------------------------------CcceeEEEcccccEEEecCCcceEEeeehhc
Confidence 1 157889999988 666999999999999864
Q ss_pred CCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCCCcc--ceeEEeeeecCCcEE
Q 000470 1382 PGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD--SILSLGSVKLNQRLL 1459 (1472)
Q Consensus 1382 ~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d--~I~~va~~~~~~~~L 1459 (1472)
...-. .|....+ +... ..+...+.||.+ .|+++| ++.||..|
T Consensus 249 ~~~~~--~~v~~k~---------~~~~------------------------~t~~~~~~Gh~~~~~ITcLa-is~DgtlL 292 (476)
T KOG0646|consen 249 LSGQS--AGVNQKG---------RHEE------------------------NTQINVLVGHENESAITCLA-ISTDGTLL 292 (476)
T ss_pred CCccc--ccccccc---------cccc------------------------cceeeeeccccCCcceeEEE-EecCccEE
Confidence 32100 0000000 0000 012234567988 999997 99999999
Q ss_pred EEEcCCceEEEcC
Q 000470 1460 ISSSRDGAIKVWK 1472 (1472)
Q Consensus 1460 vS~s~DG~IkVWk 1472 (1472)
+|||.||.|.|||
T Consensus 293 lSGd~dg~VcvWd 305 (476)
T KOG0646|consen 293 LSGDEDGKVCVWD 305 (476)
T ss_pred EeeCCCCCEEEEe
Confidence 9999999999997
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-19 Score=207.97 Aligned_cols=222 Identities=19% Similarity=0.301 Sum_probs=179.8
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccceEEeccCCceEEEEE-ecCCCEEEEEeCCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMM-LRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~t~~~~~~~I~~v~f-~~~~~~las~s~DG 1128 (1472)
.++.++.|.+.|+.++...+++-|+|||.|-|||+|+..... . -+..+...|...|.|++. .++...+|+||-|+
T Consensus 65 ~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~---~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~ 140 (735)
T KOG0308|consen 65 YIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-T---FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDR 140 (735)
T ss_pred hhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-c---hhHhhhhcccchheeeeecccCceeEEecCCCc
Confidence 578899999999999999999999999999999999998753 1 134456678889999999 67888999999999
Q ss_pred cEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCCC
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1129 ~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
.|.+||+.+.... -+..+... .......++...++.++.++. +.++++|+..+.+++||.|+++.+-.+.+ |
T Consensus 141 ~IflWDin~~~~~--l~~s~n~~-t~~sl~sG~k~siYSLA~N~t---~t~ivsGgtek~lr~wDprt~~kimkLrG--H 212 (735)
T KOG0308|consen 141 KIFLWDINTGTAT--LVASFNNV-TVNSLGSGPKDSIYSLAMNQT---GTIIVSGGTEKDLRLWDPRTCKKIMKLRG--H 212 (735)
T ss_pred cEEEEEccCcchh--hhhhcccc-ccccCCCCCccceeeeecCCc---ceEEEecCcccceEEeccccccceeeeec--c
Confidence 9999999842100 00011110 011111144567888888887 67999999999999999999998888875 9
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~V~V 1288 (1472)
..-|.++..+++|+.+++|++||+|++|||+.+.|+.++.. |...++.+.. .|.-. .+++|+-+|.|..
T Consensus 213 TdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~v-H~e~VWaL~~-~~sf~---------~vYsG~rd~~i~~ 281 (735)
T KOG0308|consen 213 TDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIV-HKEGVWALQS-SPSFT---------HVYSGGRDGNIYR 281 (735)
T ss_pred ccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEe-ccCceEEEee-CCCcc---------eEEecCCCCcEEe
Confidence 99999999999999999999999999999999999999887 4445888877 65544 7899999999999
Q ss_pred EEcCCC
Q 000470 1289 WNAENG 1294 (1472)
Q Consensus 1289 WDl~t~ 1294 (1472)
=|+.+.
T Consensus 282 Tdl~n~ 287 (735)
T KOG0308|consen 282 TDLRNP 287 (735)
T ss_pred cccCCc
Confidence 999884
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.1e-21 Score=223.59 Aligned_cols=197 Identities=21% Similarity=0.190 Sum_probs=162.4
Q ss_pred CCCCCcceeeEEEEeCCeEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEccC
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvH~DLKpeNILv~~~ 79 (1472)
|.||||+.|++.|.....+++.||||+ |+|.|...-.+.|++.++...++..+.||+|||++|-+|||||-.|||+++.
T Consensus 69 c~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~ 148 (829)
T KOG0576|consen 69 CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE 148 (829)
T ss_pred CCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence 689999999999999999999999999 6999998888889999999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHHHHHHHHHhCCC-
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP- 158 (1472)
Q Consensus 80 ~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~- 158 (1472)
|.+||+|||.+..+...- .--....||+.|||||+-. +...+.|...+|||++|+...|+-.-+|
T Consensus 149 gDvklaDfgvsaqitati-------~KrksfiGtpywmapEvaa-------verkggynqlcdiwa~gitAiel~eLqpp 214 (829)
T KOG0576|consen 149 GDVKLADFGVSAQITATI-------AKRKSFIGTPYWMAPEVAA-------VERKGGYNQLCDIWALGITAIELGELQPP 214 (829)
T ss_pred CceeecccCchhhhhhhh-------hhhhcccCCccccchhHHH-------HHhcccccccccccccccchhhhhhcCCc
Confidence 999999999865442111 1123456899999999753 4567789999999999999999987754
Q ss_pred CCCchHHHH---HHhcCCCCCc-ccCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 000470 159 FFELSHLLA---YRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 pf~~~~~~~---~~~~~~~~~~-~l~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 211 (1472)
.|+...... +.+..+.+.. .-+...++.+.+|++.+|.++|++||+++.+|.|
T Consensus 215 lfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 215 LFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 466554433 3344444322 2223456789999999999999999999999987
|
|
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=194.75 Aligned_cols=267 Identities=17% Similarity=0.191 Sum_probs=202.9
Q ss_pred eeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCcccccc-cc-----------ceEEeccCCceEEEEEecCC
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISF-RS-----------RLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1051 V~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~-~~-----------~~t~~~~~~~I~~v~f~~~~ 1118 (1472)
...+..|.-+|++++++||+++..++|.||+|.=|++.++.+.... .. ......|...+.+++.++++
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 4556789999999999999999999999999999999877643111 00 00113677789999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCC
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~ 1198 (1472)
++||+|+.|..|+||+.++.. .+. ....|...|..++|--. ...+++++.|++|++|++..+.
T Consensus 215 kylatgg~d~~v~Iw~~~t~e-------------hv~-~~~ghr~~V~~L~fr~g---t~~lys~s~Drsvkvw~~~~~s 277 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLE-------------HVK-VFKGHRGAVSSLAFRKG---TSELYSASADRSVKVWSIDQLS 277 (479)
T ss_pred cEEEecCCCceEEEecCcccc-------------hhh-cccccccceeeeeeecC---ccceeeeecCCceEEEehhHhH
Confidence 999999999999999998521 111 12356667777888765 4489999999999999999998
Q ss_pred ccceeecCCCccceEEEEEcCCCCEEEEEeCCCcEEEEECCCCcccceEeccccCCceeEEeecCCCCCccccCCCCEEE
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGssdG~I~lWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~ 1278 (1472)
.+.++-+ |++.|.++.....++.+.+|+.|+++++|++.. ..+-+..++...+.+++|.+. ..++
T Consensus 278 ~vetlyG--Hqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e--esqlifrg~~~sidcv~~In~-----------~Hfv 342 (479)
T KOG0299|consen 278 YVETLYG--HQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE--ESQLIFRGGEGSIDCVAFIND-----------EHFV 342 (479)
T ss_pred HHHHHhC--CccceeeechhcccceEEeccccceeEEEeccc--cceeeeeCCCCCeeeEEEecc-----------ccee
Confidence 8888866 999999999888889999999999999999943 233333455667888888322 2579
Q ss_pred EEEcCCeEEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEec
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+|+.+|.|.+|++.+.+.+.+........ |.. .+-++...|++++
T Consensus 343 sGSdnG~IaLWs~~KKkplf~~~~AHgv~-------------~~~----------------------~~~~~~~Witsla 387 (479)
T KOG0299|consen 343 SGSDNGSIALWSLLKKKPLFTSRLAHGVI-------------PEL----------------------DPVNGNFWITSLA 387 (479)
T ss_pred eccCCceEEEeeecccCceeEeecccccc-------------CCc----------------------cccccccceeeeE
Confidence 99999999999999888877765322100 000 0011224799999
Q ss_pred cCCCC-cEEEccCCCeEEEEeCCCCCC
Q 000470 1359 PLPGG-DLLTGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1359 ~~p~g-~llTgg~Dg~IrlWDl~~~~~ 1384 (1472)
..|.. .+++|+.+|.||+|-+..+-+
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r 414 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLR 414 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCcc
Confidence 98877 566999999999999876644
|
|
| >KOG0269 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-19 Score=211.42 Aligned_cols=293 Identities=18% Similarity=0.259 Sum_probs=207.5
Q ss_pred eeeeccccccceeEEEEcCCCCEEEEEeCCCCEEEEeCCCCccccccccce-EEeccCCceEEEEEec-CCCEEEEEeCC
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRL-TYHLEGSRALCTMMLR-HSAQVVVGACD 1127 (1472)
Q Consensus 1050 lV~~l~~H~~~V~~lafspd~~~laSgS~DGtVkvWD~~~~e~~~~~~~~~-t~~~~~~~I~~v~f~~-~~~~las~s~D 1127 (1472)
.+-++++|. +.|...++-..++.++. ...+|+.+..........-.. +-......+..|+|.. ..++||+|+..
T Consensus 34 ~~~~~k~~~---nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~n 109 (839)
T KOG0269|consen 34 MNCKLKAKA---NAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTN 109 (839)
T ss_pred eeeeccccc---ceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCC
Confidence 344455554 45556677777777766 478888877544322211110 0000112356788875 47899999999
Q ss_pred CcEEEEEccccccCCCccccccCcccceeecCCCCcEEEEEEecCCCCCceEEEEEeCCCeEEEEeCCCCCccceeecCC
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~vwdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L~~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|.|.+||+....+ ........+|...+..+.|++...+ +|++|+.||+|++||+|...-..++..
T Consensus 110 G~i~vWdlnk~~r-----------nk~l~~f~EH~Rs~~~ldfh~tep~--iliSGSQDg~vK~~DlR~~~S~~t~~~-- 174 (839)
T KOG0269|consen 110 GVISVWDLNKSIR-----------NKLLTVFNEHERSANKLDFHSTEPN--ILISGSQDGTVKCWDLRSKKSKSTFRS-- 174 (839)
T ss_pred CcEEEEecCcccc-----------chhhhHhhhhccceeeeeeccCCcc--EEEecCCCceEEEEeeecccccccccc--
Confidence 9999999973111 1112233456777888899987644 999999999999999999888777766
Q ss_pred CccceEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcc-cceEeccccCCceeEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000470 1208 EEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVP-VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1208 h~g~Itsl~~sp-~g~~LvsGssdG~I~lWDlr~~~~-i~s~~~~~~~~I~~l~~~~p~~~~~~~~~~~~~l~vas~dg~ 1285 (1472)
....|..+.|+| .++.|+++...|+|.+||+|+... ...+. +|.+++.++.| +|+.. ||++||-|+.
T Consensus 175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~-AH~GpV~c~nw-hPnr~---------~lATGGRDK~ 243 (839)
T KOG0269|consen 175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLT-AHNGPVLCLNW-HPNRE---------WLATGGRDKM 243 (839)
T ss_pred cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhh-cccCceEEEee-cCCCc---------eeeecCCCcc
Confidence 567899999999 678999999999999999997543 33333 58899999999 98654 9999999999
Q ss_pred EEEEEcCCCeEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCcCCceEeccCCCC--
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1363 (1472)
Q Consensus 1286 V~VWDl~t~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-- 1363 (1472)
|+|||+.++......... -..+|.++.|.|..
T Consensus 244 vkiWd~t~~~~~~~~tIn----------------------------------------------Tiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 244 VKIWDMTDSRAKPKHTIN----------------------------------------------TIAPVGRVKWRPARSY 277 (839)
T ss_pred EEEEeccCCCccceeEEe----------------------------------------------ecceeeeeeeccCccc
Confidence 999999764332222110 01268889999876
Q ss_pred cEEEccC--CCeEEEEeCCCCCCceEEeCCCCCCCCCCcceEEeecCceEEEEeeecCCcchhhhhHHHHhhhhcCCCCC
Q 000470 1364 DLLTGGT--DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGC 1441 (1472)
Q Consensus 1364 ~llTgg~--Dg~IrlWDl~~~~~s~vv~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1441 (1472)
.|+|++. |-.|++||+..+=-.+. ...+
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~--------------------------------------------------t~~e 307 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYA--------------------------------------------------TFLE 307 (839)
T ss_pred hhhhhhccccceEEEEeeccccccce--------------------------------------------------eeec
Confidence 5666655 99999999986633221 1123
Q ss_pred CccceeEEeeeecCCcEEEEEcCCceE
Q 000470 1442 HRDSILSLGSVKLNQRLLISSSRDGAI 1468 (1472)
Q Consensus 1442 H~d~I~~va~~~~~~~~LvS~s~DG~I 1468 (1472)
|++.++.+++-+.+...+-||+.||+|
T Consensus 308 H~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 308 HTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred cCccccceeccCCCceeeEeecCccHH
Confidence 999999997334567889999999986
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.8e-20 Score=206.54 Aligned_cols=204 Identities=18% Similarity=0.141 Sum_probs=150.5
Q ss_pred CCCCCcceeeEEEEeCC----eEEEEecccC-CcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeec
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--------GICHG 67 (1472)
Q Consensus 1 l~HpNIv~~~~~~~~~~----~~~lV~Ey~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--------gIvH~ 67 (1472)
|.|+||+.|+..-..++ .+|||.+|-+ |+|+|||.. ..++.....+++..+++||.|||.. .|.||
T Consensus 262 LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR 340 (513)
T KOG2052|consen 262 LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR 340 (513)
T ss_pred hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence 68999999998876554 6899999999 999999988 4599999999999999999999963 49999
Q ss_pred CCCCCCEEEccCCcEEEEeccccccccCCCCCCCCCceeeccCCCCccccCcccccccCCccccccCCCCCccchHHHHH
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DLKpeNILv~~~~~vkL~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
|||..||||.++|..-|+|+|+|....... ..........+||..|||||++...-.. ..- .--..+||||||
T Consensus 341 DlKSKNILVKkn~~C~IADLGLAv~h~~~t---~~idi~~N~rVGTKRYMAPEvLdetin~---~~F-esyk~ADIYafg 413 (513)
T KOG2052|consen 341 DLKSKNILVKKNGTCCIADLGLAVRHDSDT---DTIDIPPNPRVGTKRYMAPEVLDETINM---KHF-ESYKRADIYAFG 413 (513)
T ss_pred ccccccEEEccCCcEEEeeceeeEEecccC---CcccCCCCCccceeeccChHHhhhhcCh---hhh-hhhhHHHHHHHH
Confidence 999999999999999999999986553221 2233344678899999999998643211 000 012358999999
Q ss_pred HHHHHHHh---------C-CCCCC-----chHHHHHHhcCCC--CCcccCC--CCCH---HHHHHHHHhcccCcCCCCCH
Q 000470 148 CVIAELFL---------E-VPFFE-----LSHLLAYRRGQYD--PSQHLEK--IPDS---GIRKMILHMIQLEPELRFSA 205 (1472)
Q Consensus 148 ~il~eLlt---------g-~~pf~-----~~~~~~~~~~~~~--~~~~l~~--~~~~---~l~~LI~~mL~~dP~~Rpsa 205 (1472)
.|+||+.. . ++||. ..+..++++-... ..+.++. ..++ .+-.|++.||..||.-|.||
T Consensus 414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99999974 1 45662 3344555432221 1111221 2223 45578999999999999999
Q ss_pred HHHHHHh
Q 000470 206 ESYLQNY 212 (1472)
Q Consensus 206 ~elL~~~ 212 (1472)
--+-+.+
T Consensus 494 LriKKtl 500 (513)
T KOG2052|consen 494 LRIKKTL 500 (513)
T ss_pred HHHHHHH
Confidence 7776653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1472 | ||||
| 3gre_A | 437 | Crystal Structure Of Saccharomyces Cerevisiae Vps15 | 2e-10 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 8e-07 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 4e-06 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 4e-06 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-05 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 6e-05 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 6e-05 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 6e-05 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 6e-05 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 7e-05 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 7e-05 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 8e-05 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 8e-05 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 8e-05 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 8e-05 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 9e-05 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 9e-05 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 1e-04 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-04 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-04 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 1e-04 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 1e-04 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-04 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-04 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-04 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-04 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-04 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 2e-04 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-04 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-04 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 4e-04 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-04 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 5e-04 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 5e-04 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 5e-04 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-04 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-04 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 6e-04 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 6e-04 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 6e-04 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 6e-04 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 7e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 7e-04 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 7e-04 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 7e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 7e-04 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 7e-04 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 7e-04 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 7e-04 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 7e-04 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 7e-04 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 7e-04 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 8e-04 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 8e-04 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 8e-04 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 8e-04 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 8e-04 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 8e-04 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 8e-04 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 8e-04 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 8e-04 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 9e-04 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 9e-04 |
| >pdb|3GRE|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Vps15 Wd Repeat Domain Length = 437 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1472 | ||||
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-20 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-20 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 7e-20 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-20 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-18 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-18 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-18 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 8e-18 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-17 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-17 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-17 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-16 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 7e-16 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-16 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-15 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-15 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-15 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-15 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-15 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-15 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-15 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-15 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-14 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-14 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-14 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-14 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-14 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-14 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-14 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-14 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-14 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-14 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-14 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 0.003 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-13 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-13 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-13 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-13 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-13 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 6e-13 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-13 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.002 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-12 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 2e-12 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 6e-09 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-07 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 4e-05 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-12 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-12 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 6e-12 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-12 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-12 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-11 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-11 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-09 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-06 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-09 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-04 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-11 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-11 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-11 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 9e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-10 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-09 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 1e-09 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-09 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-07 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-07 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-04 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 7e-04 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 9e-04 | |
| d1qgra_ | 876 | a.118.1.1 (A:) Importin beta {Human (Homo sapiens) | 6e-09 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-09 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 5e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.004 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 5e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 5e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-07 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-06 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 7e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.002 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-05 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 1e-05 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 1e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 4e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.002 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-05 | |
| d2bpta1 | 861 | a.118.1.1 (A:1-861) Importin beta {Baker's yeast ( | 9e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 9e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.001 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.001 | |
| d2vglb_ | 579 | a.118.1.10 (B:) Adaptin beta subunit N-terminal fr | 0.002 |
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 91.3 bits (226), Expect = 1e-20
Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 17/211 (8%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 63
+ K ET+ +L+ L D L+ LS E + + LL + H+
Sbjct: 71 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 130
Query: 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 123
I H D+K EN+L+ + L+DF D T YLAPE
Sbjct: 131 IVHRDLKPENILLDDDMNIKLTDFGFSC----QLDPGEKLREVCGT----PSYLAPEIIE 182
Query: 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRR---GQYDPSQHL 179
+ +D+++ G ++ L PF+ +L R G Y
Sbjct: 183 CSMNDNHPGYG----KEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238
Query: 180 EKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
++ ++ + ++P+ R++AE L
Sbjct: 239 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.8 bits (225), Expect = 2e-20
Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 21/183 (11%)
Query: 29 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 88
++ L +L A+ CH K + H DIK EN+L+ S L ++DF
Sbjct: 92 TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 151
Query: 89 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148
+ S + T L YL PE + + +D++++G
Sbjct: 152 WSV-----HAPSSRRTTLCGT----LDYLPPE----------MIEGRMHDEKVDLWSLGV 192
Query: 149 VIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 207
+ E + + PF ++ Y+R + + + G R +I +++ P R
Sbjct: 193 LCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE-GARDLISRLLKHNPSQRPMLRE 251
Query: 208 YLQ 210
L+
Sbjct: 252 VLE 254
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 7e-20
Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 25/225 (11%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
+ D+ Y Y N L + ++ +++ A++ H KGI H D+K E
Sbjct: 78 QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 137
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVA 132
N+L+ + ++DF + K P ++ Y++PE +
Sbjct: 138 NILLNEDMHIQITDFGTAK-----VLSPESKQARANSFVGTAQYVSPE----------LL 182
Query: 133 QDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMI 191
+ S D++A+GC+I +L PF + L +++ EK R ++
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLV 241
Query: 192 LHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLH 236
++ L+ R E ++ Y + PF + W LH
Sbjct: 242 EKLLVLDATKRLGCEE-MEGYGPLK----AHPFFESV--TWENLH 279
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 9e-20
Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 19/210 (9%)
Query: 7 VHKKFWQETDKAAYLLRQYF-FNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
V + ++L ++ ++ + L+ + + + Q L A+ H+ I
Sbjct: 72 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 131
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
H D+K N+L T + L+DF D+ ++APE
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-------RRDSFIGTPYWMAPEVVMC 184
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSH---LLAYRRGQYDPSQHLE 180
++D P D++++G + E+ +E P EL+ LL + +
Sbjct: 185 ET-----SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS 239
Query: 181 KIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ + + + ++ + R++ LQ
Sbjct: 240 RWSSN-FKDFLKKCLEKNVDARWTTSQLLQ 268
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.7 bits (209), Expect = 2e-18
Identities = 41/217 (18%), Positives = 80/217 (36%), Gaps = 28/217 (12%)
Query: 6 CVHKKFWQETDKAAYLLRQY-----FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH 60
+ + T+ Y++ +Y + + +L + QL LA+K+CH
Sbjct: 67 RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126
Query: 61 EKG-----ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC 115
+ + H D+K NV + + L DF + + + F+
Sbjct: 127 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----ILNHDTSFA---KAFVGTPY 179
Query: 116 YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHLLAYRRGQYD 174
Y++PE+ DI+++GC++ EL L PF S + +
Sbjct: 180 YMSPEQMNRM----------SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 229
Query: 175 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211
+ + + ++I M+ L+ R S E L+N
Sbjct: 230 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.5 bits (211), Expect = 4e-18
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 27/193 (13%)
Query: 29 SLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 86
L R+ + E + + A++ H I H D+K EN+L TS +
Sbjct: 95 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 154
Query: 87 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 146
F S + + Y+APE V S D++++
Sbjct: 155 LTDFGFAKETTSHNSLTTPCYT-----PYYVAPE----------VLGPEKYDKSCDMWSL 199
Query: 147 GCVIAELFLEVPFFELSHLLA--------YRRGQYD-PSQHLEKIPDSGIRKMILHMIQL 197
G ++ L P F +H LA R GQY+ P+ ++ + ++ +I ++++
Sbjct: 200 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE-VKMLIRNLLKT 258
Query: 198 EPELRFSAESYLQ 210
EP R + ++
Sbjct: 259 EPTQRMTITEFMN 271
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.9 bits (207), Expect = 6e-18
Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 20/200 (10%)
Query: 14 ETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73
+++ +Y + T + + + + L A++ H + H DIK +N
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQ 133
+L+ + L+DF T ++APE
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVTRK-------- 191
Query: 134 DAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKIPD--SGIRKM 190
P +DI+++G + E+ E P+ + L A + + L+ + R
Sbjct: 192 --AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 191 ILHMIQLEPELRFSAESYLQ 210
+ + ++ E R SA+ LQ
Sbjct: 250 LNRCLDMDVEKRGSAKELLQ 269
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.1 bits (205), Expect = 8e-18
Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 22/215 (10%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEK 62
+ T ++ Q+ SL L +++ +A Q + H K
Sbjct: 64 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
I H D+K N+ + + + DF S F+ + ++APE
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----VKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSH----LLAYRRGQYDP-- 175
P D++A G V+ EL ++P+ +++ + RG P
Sbjct: 179 RMQ-------DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 176 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
S+ P + +++++ ++ + + R L
Sbjct: 232 SKVRSNCPKA-MKRLMAECLKKKRDERPLFPQILA 265
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 83.3 bits (205), Expect = 8e-18
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Query: 29 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 88
+LRD + T ++ + A+ H+ GI H D+K N+++++ N + + DF
Sbjct: 97 TLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG 156
Query: 89 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148
+ + + + T YL+PE A+ + D++++GC
Sbjct: 157 IARAIADSGNSVTQTAAVIGTAQ----YLSPE----------QARGDSVDARSDVYSLGC 202
Query: 149 VIAELFL-EVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF 203
V+ E+ E PF S + R PS E + + ++L + PE R+
Sbjct: 203 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD-LDAVVLKALAKNPENRY 261
Query: 204 SA 205
Sbjct: 262 QT 263
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.0 bits (202), Expect = 2e-17
Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 20/209 (9%)
Query: 7 VHKKFWQETDKAAYLLRQYFFNSL-RDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 65
V + YL +Y DR+ + + + QL+ V H GI
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 125
H DIK EN+L+ + L +SDF Y++ L Y+APE
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLAT--VFRYNNRERLLN---KMCGTLPYVAPELLKRR 180
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHLEK 181
+D+++ G V+ + + + + + + +K
Sbjct: 181 EFHA---------EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK 231
Query: 182 IPDSGIRKMILHMIQLEPELRFSAESYLQ 210
I + ++ ++ P R + +
Sbjct: 232 IDSA-PLALLHKILVENPSARITIPDIKK 259
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.9 bits (204), Expect = 2e-17
Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 20/207 (9%)
Query: 7 VHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 65
H +T + + + +Y L + + L + A +++L ++ H KGI
Sbjct: 66 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV 125
Query: 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 125
+ D+K +N+L+ + ++DF K + + F Y+APE
Sbjct: 126 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTP-------DYIAPE----- 173
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKIPD 184
+ S+D ++ G ++ E+ + + PF + + D + +
Sbjct: 174 -----ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 228
Query: 185 SGIRKMILHMIQLEPELRFSAESYLQN 211
+ +++ + EPE R ++
Sbjct: 229 E-AKDLLVKLFVREPEKRLGVRGDIRQ 254
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 82.0 bits (202), Expect = 3e-17
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 21/200 (10%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
+ A+L+ +Y + L VE + L + H + H D+K
Sbjct: 85 LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAG 144
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVA 132
N+L++ + L DF S + + F T ++APE
Sbjct: 145 NILLSEPGLVKLGDFGSASIM-------APANSFVGT----PYWMAPEVILAMD------ 187
Query: 133 QDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL-LAYRRGQYDPSQHLEKIPDSGIRKM 190
+ +D++++G EL + P F ++ + Y Q + R
Sbjct: 188 -EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246
Query: 191 ILHMIQLEPELRFSAESYLQ 210
+ +Q P+ R ++E L+
Sbjct: 247 VDSCLQKIPQDRPTSEVLLK 266
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 80.9 bits (199), Expect = 1e-16
Identities = 36/205 (17%), Positives = 68/205 (33%), Gaps = 26/205 (12%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
E D ++ ++ L +++ +S E Q+ + HE H D+K
Sbjct: 93 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 152
Query: 72 ENVLVTSW--NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
EN++ T+ N L L DF D + APE
Sbjct: 153 ENIMFTTKRSNELKLIDFGLTAHL--------DPKQSVKVTTGTAEFAAPE--------- 195
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHLEKIPDS 185
VA+ P+ D+++VG + L + F + L + ++
Sbjct: 196 -VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 254
Query: 186 GIRKMILHMIQLEPELRFSAESYLQ 210
+ I ++ +P R + L+
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALE 279
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.3 bits (190), Expect = 7e-16
Identities = 35/204 (17%), Positives = 76/204 (37%), Gaps = 27/204 (13%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIK 70
+ K L+ + + +L+ L + + + Q+L ++ H + I H D+K
Sbjct: 82 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 71 CENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
C+N+ +T + + D S T ++APE +
Sbjct: 142 CDNIFITGPTGSVKIGDLGLAT-----LKRASFAKAVIGT----PEFMAPEMY------- 185
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL--LAYRRGQYDPSQHLEKIPDSG 186
+ S+D++A G + E+ E P+ E + + R +K+
Sbjct: 186 ----EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 241
Query: 187 IRKMILHMIQLEPELRFSAESYLQ 210
++++I I+ + R+S + L
Sbjct: 242 VKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.0 bits (189), Expect = 8e-16
Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 25/205 (12%)
Query: 11 FWQETDKAAYLLRQYFFN-SLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67
E Y++ +Y SL D L + L + + A++ H
Sbjct: 68 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 127
Query: 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGG 127
D+ NVLV+ N +SDF K + S DTG + + APE
Sbjct: 128 DLAARNVLVSEDNVAKVSDFGLTK----------EASSTQDTGKLPVKWTAPE------- 170
Query: 128 EMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDS 185
++ D+++ G ++ E++ VP+ + R +
Sbjct: 171 ---ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 227
Query: 186 GIRKMILHMIQLEPELRFSAESYLQ 210
+ +++ + L+ +R S +
Sbjct: 228 AVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.9 bits (186), Expect = 3e-15
Identities = 27/206 (13%), Positives = 61/206 (29%), Gaps = 17/206 (8%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 63
P + + ++ L+ + L L + L Q+ + +K E
Sbjct: 68 PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 123
H D+ NVL+ + ++ +SDF K + + + + APE
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAPE--- 180
Query: 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEK 181
D+++ G ++ E F + P+ + +
Sbjct: 181 -------CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA 233
Query: 182 IPDSGIRKMILHMIQLEPELRFSAES 207
+ ++ + E R +
Sbjct: 234 GCPREMYDLMNLCWTYDVENRPGFAA 259
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 3e-15
Identities = 28/205 (13%), Positives = 64/205 (31%), Gaps = 19/205 (9%)
Query: 11 FWQETDKAAYLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 68
++ + ++ Y + ++ + Q+ +K K H D
Sbjct: 96 ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 155
Query: 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGE 128
+ N ++ + ++DF + YD D + ++A E
Sbjct: 156 LAARNCMLDEKFTVKVADFGLARDM---YDKEFDSVHNKTGAKLPVKWMALE-------- 204
Query: 129 MQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHL--LAYRRGQYDPSQHLEKIPDS 185
Q D+++ G ++ EL P + + + Q E PD
Sbjct: 205 --SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 262
Query: 186 GIRKMILHMIQLEPELRFSAESYLQ 210
+ +++L + E+R S +
Sbjct: 263 -LYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (187), Expect = 3e-15
Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 26/205 (12%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
E+ + ++ ++ + +R++T F L+ E Q+ A++ H I H DI+
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130
Query: 72 ENVLVTSWNW--LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
EN++ + + + +F + RL + APE +
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQAR-------------QLKPGDNFRLLFTAPEYYA-----P 172
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQYDPSQHLEKIPDS 185
+V Q + + D++++G ++ L PF ++ + +Y + K
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI 232
Query: 186 GIRKMILHMIQLEPELRFSAESYLQ 210
+ ++ E + R +A LQ
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQ 257
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 75.9 bits (186), Expect = 3e-15
Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 16/208 (7%)
Query: 7 VHKKFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
+H + ++ ++ N D ++++ + + +K +
Sbjct: 90 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 149
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
H D+ N+LV S +SDF + DP+ S R + AP
Sbjct: 150 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR--WTAP----- 202
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKI 182
+ Q + D+++ G V+ E+ E P++++++ + D
Sbjct: 203 -----EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMD 257
Query: 183 PDSGIRKMILHMIQLEPELRFSAESYLQ 210
S + +++L Q + R +
Sbjct: 258 CPSALHQLMLDCWQKDRNHRPKFGQIVN 285
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.6 bits (185), Expect = 5e-15
Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 19/205 (9%)
Query: 6 CVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
V + +T+ +L+ Y L LS + E + +++LA++ H+ GI
Sbjct: 91 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 150
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
+ DIK EN+L+ S + L+DF S F Y
Sbjct: 151 IYRDIKLENILLDSNGHVVLTDF--------------GLSKEFVADETERAYDFCGTIEY 196
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHLE 180
++ D+ ++D +++G ++ EL F E + R
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 256
Query: 181 KIPDSGIRKMILHMIQLEPELRFSA 205
+ + + +I ++ +P+ R
Sbjct: 257 QEMSALAKDLIQRLLMKDPKKRLGC 281
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 75.9 bits (186), Expect = 5e-15
Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
E L+ ++ L DR++ + +S E Q +K HE I H DIK
Sbjct: 96 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP 155
Query: 72 ENVLVTSWNW--LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
EN++ + + + DF + T + APE
Sbjct: 156 ENIMCETKKASSVKIIDFGLATKL-------NPDEIVKVTTATA-EFAAPE--------- 198
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHLEKIPDS 185
+ P+ D++A+G + L + F +L L +R ++ +
Sbjct: 199 -IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP 257
Query: 186 GIRKMILHMIQLEPELRFSAESYLQ 210
+ I +++Q EP R + L+
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 6e-15
Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 20/210 (9%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEK 62
P + K T+ +++ + LR L + L L A+QL A+ K
Sbjct: 68 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
H DI NVLV+S + + L DF + + G + ++APE
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMAPESI 181
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLE 180
+ D++ G + E+ + PF + + R + +
Sbjct: 182 ----------NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231
Query: 181 KIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ ++ +P R
Sbjct: 232 PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.9 bits (181), Expect = 9e-15
Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 24/206 (11%)
Query: 15 TDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWL--AFQLLLAVKQCHEKGICHGDIKC 71
T + Y++ +Y N SL D L TP + L K L A Q+ + E+ H D++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137
Query: 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV 131
N+LV+ ++DF + + + + + APE
Sbjct: 138 ANILVSDTLSCKIADFGLARLI------EDNEYTAREGAKFPIKWTAPEAI--------- 182
Query: 132 AQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRK 189
D+++ G ++ E+ +P+ +++ + + + +
Sbjct: 183 -NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ 241
Query: 190 MILHMIQLEPELRFSAE---SYLQNY 212
++ + PE R + + S L+++
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLEDF 267
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.5 bits (182), Expect = 1e-14
Identities = 28/223 (12%), Positives = 54/223 (24%), Gaps = 23/223 (10%)
Query: 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNS--LRDRLSTPPFLSLVEKKWLAFQLLLAVKQ 58
M + W + ++ SL LA Q++ ++
Sbjct: 59 MQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 59 CHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKR---LC 115
H K H D+K +N L+ L F D + +
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 178
Query: 116 YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRR 170
Y + D+ ++G V+ L ++ R
Sbjct: 179 YASIN----------THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228
Query: 171 GQYDPSQHLEKIPD---SGIRKMILHMIQLEPELRFSAESYLQ 210
+ S +E + S + L + + Q
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.6 bits (180), Expect = 1e-14
Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 29/209 (13%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFN--SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 63
+ W E + L+ + L D ++ L + +Q+L AV+ CH G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 64 ICHGDIKCENVLVT-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
+ H DIK EN+L+ + L L DF S + ++ F T Y PE
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGA-----LLKDTVYTDFDGTRV----YSPPE-- 179
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQHLEK 181
+ S ++++G ++ + + ++PF ++ RGQ Q +
Sbjct: 180 -------WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---RGQVFFRQRV-- 227
Query: 182 IPDSGIRKMILHMIQLEPELRFSAESYLQ 210
S + +I + L P R + E
Sbjct: 228 --SSECQHLIRWCLALRPSDRPTFEEIQN 254
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.0 bits (181), Expect = 2e-14
Identities = 26/204 (12%), Positives = 70/204 (34%), Gaps = 21/204 (10%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFNS--LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK 62
P + + + N L LS + ++ +++ A++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
+ + DIK EN+++ + ++DF G + +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDF-------------GLCKEGISDGATMKTFCGTPEY 171
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEK 181
+V +D ++D + +G V+ E+ +PF+ H + + +
Sbjct: 172 L----APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT 227
Query: 182 IPDSGIRKMILHMIQLEPELRFSA 205
+ + ++ +++ +P+ R
Sbjct: 228 LSPE-AKSLLAGLLKKDPKQRLGG 250
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.0 bits (181), Expect = 2e-14
Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 22/192 (11%)
Query: 24 QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLY 83
+Y + L+ + A+Q+ ++ K H D+ NVLVT +
Sbjct: 145 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVK 204
Query: 84 LSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143
+ DF + + ++APE + D+
Sbjct: 205 ICDFGLARDIM-----SDSNYVVRGNARLPVKWMAPESL----------FEGIYTIKSDV 249
Query: 144 FAVGCVIAELFL--EVPFFELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLE 198
++ G ++ E+F P+ + + + Q + I ++ +
Sbjct: 250 WSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP-FYATEE-IYIIMQSCWAFD 307
Query: 199 PELRFSAESYLQ 210
R S +
Sbjct: 308 SRKRPSFPNLTS 319
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.3 bits (179), Expect = 2e-14
Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 19/194 (9%)
Query: 20 YLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79
L R PP LS E+ +A Q+ + E+ H D+ N LV
Sbjct: 117 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 176
Query: 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 139
+ ++DF + Y +D+ + ++ PE + +
Sbjct: 177 MVVKIADFGLSRNIY-----SADYYKADGNDAIPIRWMPPESIFYN----------RYTT 221
Query: 140 SMDIFAVGCVIAELFL--EVPFFELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQ 196
D++A G V+ E+F P++ ++H + Y + E P + ++
Sbjct: 222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLE-LYNLMRLCWS 280
Query: 197 LEPELRFSAESYLQ 210
P R S S +
Sbjct: 281 KLPADRPSFCSIHR 294
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.4 bits (177), Expect = 2e-14
Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 20/202 (9%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
+ +++ +Y N L + L + + + A++ K H D+
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 128
Query: 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV 131
N LV + +SDF + Y+ D+ + + + PE
Sbjct: 129 RNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP----VRWSPPEVL--------- 173
Query: 132 AQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRK 189
+ DI+A G ++ E++ ++P+ ++ + + +
Sbjct: 174 -MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT 232
Query: 190 MILHMIQLEPELRFSAESYLQN 211
++ + + R + + L N
Sbjct: 233 IMYSCWHEKADERPTFKILLSN 254
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.1 bits (179), Expect = 3e-14
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
E+ YL+ Q L DR+ F + + L FQ+L AVK H+ GI H D+K E
Sbjct: 77 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 136
Query: 73 NVLVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
N+L S + + +SDF K D S S T Y+APE
Sbjct: 137 NLLYYSLDEDSKIMISDFGLSK----MEDPGSVLSTACGT----PGYVAPEVL------- 181
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR---GQYD-PSQHLEKIPD 184
P ++D +++G + L PF++ + + + +Y+ S + + I D
Sbjct: 182 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238
Query: 185 SGIRKMILHMIQLEPELRFSAESYLQ 210
S + I H+++ +PE RF+ E LQ
Sbjct: 239 S-AKDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.8 bits (178), Expect = 3e-14
Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 17/185 (9%)
Query: 29 SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 87
L L + + L Q+ + +K EK H D+ NVL+ + ++ +SDF
Sbjct: 94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 153
Query: 88 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147
K + G L + AP + D+++ G
Sbjct: 154 GLSK----ALGADDSYYTARSAGKWPLKWYAP----------ECINFRKFSSRSDVWSYG 199
Query: 148 CVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 205
+ E + P+ ++ + + ++ + E R
Sbjct: 200 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDF 259
Query: 206 ESYLQ 210
+ Q
Sbjct: 260 LTVEQ 264
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (176), Expect = 4e-14
Identities = 36/210 (17%), Positives = 74/210 (35%), Gaps = 22/210 (10%)
Query: 7 VHKKFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
+ + K ++ +Y N D+ S+++ + + +K
Sbjct: 72 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 131
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
H D+ N+LV S +SDF + +D + ++ G + + APE
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGLSR----VLEDDPEATYTTSGGKIPIRWTAPEAISY 187
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKI 182
+ D+++ G V+ E+ E P++ELS+ + + L
Sbjct: 188 R----------KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK--AINDGFRLPTP 235
Query: 183 PD--SGIRKMILHMIQLEPELRFSAESYLQ 210
D S I ++++ Q E R +
Sbjct: 236 MDCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 72.5 bits (177), Expect = 6e-14
Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 22/194 (11%)
Query: 11 FWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70
+++ ++ + L S ++ A Q++L + H + + D+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130
EN+L+ ++ ++DF K T LAPE
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRT----------WTLCGTPEALAPEIILSK----- 213
Query: 131 VAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRK 189
++D +A+G +I E PFF + Y + + ++
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKD 267
Query: 190 MILHMIQLEPELRF 203
++ +++Q++ RF
Sbjct: 268 LLRNLLQVDLTKRF 281
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 72.5 bits (177), Expect = 8e-14
Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 22/202 (10%)
Query: 7 VHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 65
V + T + L LS S + ++ A +++L ++ H + +
Sbjct: 70 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 129
Query: 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 125
+ D+K N+L+ + +SD D K+ Y
Sbjct: 130 YRDLKPANILLDEHGHVRISDLGLAC----------------DFSKKKPHASVGTHGYMA 173
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH--LLAYRRGQYDPSQHLEKI 182
+ + S D F++GC++ +L PF + R + L
Sbjct: 174 --PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231
Query: 183 PDSGIRKMILHMIQLEPELRFS 204
+R ++ ++Q + R
Sbjct: 232 FSPELRSLLEGLLQRDVNRRLG 253
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 71.7 bits (174), Expect = 1e-13
Identities = 52/347 (14%), Positives = 103/347 (29%), Gaps = 44/347 (12%)
Query: 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1103
W PR L H S V + S VSAS+D+T+KVWD + F L H
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD----FERTLKGH 58
Query: 1104 LEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGA 1163
+ + + + F R + +
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--------------- 103
Query: 1164 IVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW 1223
V+ + + ++++ I +W+ ++ T +V + G
Sbjct: 104 ----VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--HREWVRMVRPNQDGTL 157
Query: 1224 FVSGSSRGVLTLWDLRFLVPV-------NSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1276
S S+ + +W + + + P + + +P
Sbjct: 158 IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 217
Query: 1277 IYVAAGC--NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS--SRSNPKTDLR 1332
++ +G + +W+ G C L D + + + S ++ KT
Sbjct: 218 PFLLSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRV 273
Query: 1333 RNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWD 1378
+ K + LN + SL + TG D ++ W+
Sbjct: 274 WDYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.3 bits (121), Expect = 4e-07
Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 13/207 (6%)
Query: 929 SDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSF--SISNGSKQFYRVVHE 986
D +++ + G + + + + S S ++ E
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
Query: 987 PEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRP 1046
+ + A GS P L+G S +T + D
Sbjct: 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG--SRDKTIKMWD---VS 235
Query: 1047 RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEG 1106
G+ + L H + V + F +S +DD T++VWD + L H
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC----MKTLNAH--E 289
Query: 1107 SRALCTMMLRHSAQVVVGACDGIIHMF 1133
+ + VV G+ D + ++
Sbjct: 290 HFVTSLDFHKTAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/297 (13%), Positives = 83/297 (27%), Gaps = 33/297 (11%)
Query: 1189 IHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ 1248
I +WD + TLK V + G S S+ + LWD + + +
Sbjct: 41 IKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 98
Query: 1249 YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH--------QVL 1300
+ + S ++ V + ++
Sbjct: 99 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 158
Query: 1301 RTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1360
+ + D + + + R + + + ++E
Sbjct: 159 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS---ETKKSGK 215
Query: 1361 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPN-----LKGVGNDEFYETRSSSGVQVVQE 1415
PG LL+G D I+ WD + + G + + +F + + V +
Sbjct: 216 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275
Query: 1416 RKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472
K + L A H + SL +++ S D +KVW+
Sbjct: 276 YKNKRCMKTLNA--------------HEHFVTSL-DFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 1e-13
Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 23/213 (10%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEK 62
+ + + ++ + SL DRL L A Q+ + K
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
H D+ N+L+ + + + + DF + D + + AP
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQEHRKVPFAWCAP--- 183
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSH---LLAYRRGQYDPSQ 177
+ + + D + G + E+F + P+ L+ L + +
Sbjct: 184 -------ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 178 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
E P I +++ +PE R + +
Sbjct: 237 P-EDCPQD-IYNVMVQCWAHKPEDRPTFVALRD 267
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.3 bits (174), Expect = 1e-13
Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 22/196 (11%)
Query: 11 FWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70
+Q+ + ++ L L K+ A ++ LA++ H K I + D+K
Sbjct: 72 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLK 131
Query: 71 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 130
EN+L+ + ++DF K T Y+APE
Sbjct: 132 PENILLDKNGHIKITDFGFAK----------YVPDVTYTLCGTPDYIAPE---------- 171
Query: 131 VAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRK 189
V P S+D ++ G +I E L PF++ + + Y + + + ++
Sbjct: 172 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED-VKD 230
Query: 190 MILHMIQLEPELRFSA 205
++ +I + R
Sbjct: 231 LLSRLITRDLSQRLGN 246
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 70.2 bits (171), Expect = 2e-13
Identities = 32/220 (14%), Positives = 61/220 (27%), Gaps = 26/220 (11%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
+ ++ + L+ SL D L S+ A Q+L V+ HEK +
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 122
Query: 65 CHGDIKCENVLVTS-----WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 119
+ DIK +N L+ N +Y+ DF K P Y++
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182
Query: 120 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF---------ELSHLLAYRR 170
D+ A+G V + + + ++
Sbjct: 183 N----------THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 232
Query: 171 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ P+ K + + L + +
Sbjct: 233 QSTPLRELCAGFPEE-FYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.5 bits (172), Expect = 3e-13
Identities = 39/227 (17%), Positives = 70/227 (30%), Gaps = 35/227 (15%)
Query: 14 ETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKC 71
+D + ++ SL L + ++ ++ + EK I H D+K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC----YLAPERFYEHGG 127
N+LV S + L DF D+ Y++PE
Sbjct: 134 SNILVNSRGEIKLCDFGVSG-------------QLIDSMANSFVGTRSYMSPE------- 173
Query: 128 EMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLEKI 182
Q DI+++G + E+ + P L+ + + D ++ +
Sbjct: 174 ---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 230
Query: 183 PDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT-YFSPFLHNF 228
G M P F Y+ N P+ FS +F
Sbjct: 231 RTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.2 bits (171), Expect = 4e-13
Identities = 49/222 (22%), Positives = 74/222 (33%), Gaps = 44/222 (19%)
Query: 20 YLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79
L + + +L LS + +Q+L +K H + H D+K N+L+ +
Sbjct: 86 VYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 145
Query: 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 139
L + DF + D D + F Y APE G
Sbjct: 146 CDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT---------K 192
Query: 140 SMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQ------------------ 177
S+DI++VGC++AE+ P F L L PSQ
Sbjct: 193 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 252
Query: 178 -HLEKIP--------DSGIRKMILHMIQLEPELRFSAESYLQ 210
H K+P DS ++ M+ P R E L
Sbjct: 253 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 6e-13
Identities = 31/203 (15%), Positives = 69/203 (33%), Gaps = 19/203 (9%)
Query: 11 FWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEK-KWLAFQLLLAVKQCHEKGICHGDI 69
E + L D L T L E + + + E + H D+
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEM 129
N LV + +SDF + ++ D + + + + +PE
Sbjct: 128 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFP----VKWASPE--------- 172
Query: 130 QVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGI 187
V + D+++ G ++ E+F ++P+ S+ + ++ + +
Sbjct: 173 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 231
Query: 188 RKMILHMIQLEPELRFSAESYLQ 210
+++ H + PE R + L+
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLR 254
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.1 bits (168), Expect = 7e-13
Identities = 28/215 (13%), Positives = 65/215 (30%), Gaps = 23/215 (10%)
Query: 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNS---LRDRLSTPPFLSLVEKKWLAFQLLLAVK 57
+ ++ + +L + + ST LS + A + +
Sbjct: 82 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 141
Query: 58 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 117
+K H D+ N+LV ++DF S + K+
Sbjct: 142 YLSQKQFIHRDLAARNILVGENYVAKIADFG--------------LSRGQEVYVKKTMGR 187
Query: 118 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDP 175
P R+ ++ + + D+++ G ++ E+ P+ ++ Y +
Sbjct: 188 LPVRWM----AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 243
Query: 176 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
D + ++ + +P R S L
Sbjct: 244 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 278
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.2 bits (166), Expect = 8e-13
Identities = 30/196 (15%), Positives = 65/196 (33%), Gaps = 21/196 (10%)
Query: 30 LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 89
+ T +L L + +A Q+ + H D++ N+LV ++DF
Sbjct: 100 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 159
Query: 90 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149
+ + + + AP + A D+++ G +
Sbjct: 160 ARLI------EDNEYTARQGAKFPIKWTAP----------EAALYGRFTIKSDVWSFGIL 203
Query: 150 IAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE- 206
+ EL VP+ + + + + + ++ + EPE R + E
Sbjct: 204 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 263
Query: 207 --SYLQNYAAVVFPTY 220
++L++Y P Y
Sbjct: 264 LQAFLEDYFTSTEPQY 279
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.4 bits (168), Expect = 9e-13
Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 44/300 (14%)
Query: 1045 RPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------------- 1091
R + + +H S V + S+D + + + T +V+
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANK 107
Query: 1092 -----------------KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1134
+ + F + G+ + + +V G
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY 167
Query: 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNC-------ASHMFMYSTQNC 1187
+ SG ++ D + G ++ + +
Sbjct: 168 SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 227
Query: 1188 GIHLWDTRSNSNTWTLKAIPE-----EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV 1242
+ +WD+ + L + E + V S+V G VSGS + LW+L+
Sbjct: 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287
Query: 1243 PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR-PLIYVAAGCNEVSLWNAENGSCHQVLR 1301
+ + E + +V+TT I + V W+ ++G+ +L+
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 6e-05
Identities = 44/351 (12%), Positives = 104/351 (29%), Gaps = 70/351 (19%)
Query: 1163 AIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE-------------- 1208
++V V ++ D ++ + N ++ S L
Sbjct: 63 SVVCCVKFSNDG----EYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 1209 --EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1266
+ Y+ S+ P G + +G+ ++ +WD+ V Q +
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-- 176
Query: 1267 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1326
+ +G + ++ + + L + DG T ++ P ++ S
Sbjct: 177 -----------KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 225
Query: 1327 PKTDLRRNVNQKYRVDELNEPPPRLLG----IRSLLPLPGGD-LLTGGTDLKIRRWDHCS 1381
+ + + V+ L+ G + S++ G +++G D ++ W+ +
Sbjct: 226 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 285
Query: 1382 PGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA-- 1439
PN V Q + + + + D
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY------------ILSGSKDRGVL 333
Query: 1440 -------------GCHRDSILSL-----GSVKLNQRLLISSSRDGAIKVWK 1472
HR+S++S+ S+ + + S D ++WK
Sbjct: 334 FWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.0 bits (102), Expect = 1e-04
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1044 WRPR-GILVAHLQEHCSAVNEIAISHDHSF------FVSASDDSTVKVWDSRKL 1090
W + G + LQ H ++V +A+++ S F + S D ++W +K+
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.3 bits (95), Expect = 8e-04
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
Query: 1021 ASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSA-VNEIAISHDHSFFVSASDD 1079
S D + ++ ++ P V +A + + + +S S D
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 329
Query: 1080 STVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1138
V WD + + + + + A + + G+ D ++ I
Sbjct: 330 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 0.002
Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 36/250 (14%)
Query: 1035 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1094
R S + P + + + + S D F + ++D +++WD + +
Sbjct: 98 RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM 157
Query: 1095 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKY------ 1148
+ L + + +S G
Sbjct: 158 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 217
Query: 1149 ----SGISD--IKKKDTKEGAIVTLVNYNTDNCASH--------------MFMYSTQNCG 1188
+G D ++ D++ G +V ++ ++ H + + +
Sbjct: 218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 277
Query: 1189 IHLWDTRSNSN----------TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDL 1238
+ LW+ ++ +N T + I + +V S+ T + +SGS + WD
Sbjct: 278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337
Query: 1239 RFLVPVNSWQ 1248
+ P+ Q
Sbjct: 338 KSGNPLLMLQ 347
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.2 bits (166), Expect = 1e-12
Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 19/202 (9%)
Query: 14 ETDKAAYLLRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 72
E L+ + L D L+ L+ E Q+L V H I H D+K E
Sbjct: 83 ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPE 142
Query: 73 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVA 132
N+++ N D ++F F T ++APE +
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP----EFVAPE----------IV 188
Query: 133 QDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQYDPSQHLEKIPDSGIR 188
PL D++++G + L PF + L Y+ + +
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 189 KMILHMIQLEPELRFSAESYLQ 210
I ++ +P+ R + + LQ
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQ 270
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (169), Expect = 2e-12
Identities = 48/350 (13%), Positives = 102/350 (29%), Gaps = 20/350 (5%)
Query: 432 PHYRRAAILLLK---SSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 488
+R A L D+D ++V+ ++ +L D V+ A++ L PLV
Sbjct: 17 KDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLG---PLV 73
Query: 489 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 548
E I+ L +E +R + + + + L+
Sbjct: 74 SKVKEYQV----ETIVDTLCTNMLSDKEQLRDISSIGLKTV-IGELPPASSGSALAANVC 128
Query: 549 LDKLSAPHKSPSSSNETSVQLQRLNADVQL-----SQLRKSIAEVVQELVMGPK-QTPSI 602
+ + + SVQL+ L+ + L ++ L+ ++
Sbjct: 129 KKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAV 188
Query: 603 RRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVE 662
R+ + +G+L G D + +L + + I + G R E
Sbjct: 189 RKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGE 248
Query: 663 --EYLLPYIEQALSDATEAVIVNALDCLAILCKS-GYLRKRILLEMIERAFPLLCYPSQW 719
E ++P + + + + + + + + +I L Y +
Sbjct: 249 YLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNY 308
Query: 720 VRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCL 769
A G D A+ K L + +
Sbjct: 309 NYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVV 358
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.6 bits (140), Expect = 6e-09
Identities = 60/417 (14%), Positives = 123/417 (29%), Gaps = 34/417 (8%)
Query: 343 STFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPF 402
++F + + + + L + + + + ++ L L+SE D + F
Sbjct: 653 ASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISF 712
Query: 403 LPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHV 462
L + S+L + V+ P + A+ + + +
Sbjct: 713 LTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDL 772
Query: 463 IAMLSDPAAIVRCAAL--ETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRI 520
+ ML+ P A ++ I V + K P + + + +
Sbjct: 773 LRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIR 832
Query: 521 CYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQ 580
A L + G + H I LS L + S S + A L
Sbjct: 833 LLA-------LLSLGEVGHHIDLSGQLELKSVILEAFSSPSEE------VKSAASYALGS 879
Query: 581 L-RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAF---LND 636
+ ++ E + ++ P + LL + + S ++ I
Sbjct: 880 ISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCEC 939
Query: 637 RDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLA-ILCKSG 695
+E R V V C E LLP ++ L + + + + +
Sbjct: 940 AEEGTRNV-----VAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHP 994
Query: 696 YLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFL 752
+L I L P VRR + +++ + + +IR L
Sbjct: 995 QPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPS---------LIRDLL 1042
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (128), Expect = 1e-07
Identities = 39/304 (12%), Positives = 100/304 (32%), Gaps = 17/304 (5%)
Query: 459 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 518
+ +++ ++ R A L L ++ D + ++ M+ L +D V
Sbjct: 5 ISNLLEKMTSSDKDFRFMATNDLMTE--LQKDSIKLDDDSERK-VVKMILKLLEDKNGEV 61
Query: 519 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 578
+ + L + V +I + + + + + +S+ L+ + ++
Sbjct: 62 QNLAVKCLGPLVSKVKEYQVETIVDT---LCTNMLSD--KEQLRDISSIGLKTVIGELPP 116
Query: 579 SQLRKSIAEVVQELVMG-------PKQTPSIRRALLQDIGNLCSFFGQRQSNDF--LLPI 629
+ ++A V + + G ++ S++ L + ++ S G N +L
Sbjct: 117 ASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTC 176
Query: 630 LPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLA 689
L L +R + ++ G + + + + + + + + C+A
Sbjct: 177 LLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIA 236
Query: 690 ILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIR 749
+ + R LE I C R S + Y ++ +I
Sbjct: 237 AISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIIN 296
Query: 750 PFLR 753
L+
Sbjct: 297 ICLK 300
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (107), Expect = 4e-05
Identities = 55/336 (16%), Positives = 107/336 (31%), Gaps = 28/336 (8%)
Query: 313 LLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNG 372
+L L+ G + ++ M S + S S + + +++ A K G
Sbjct: 752 MLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEG 811
Query: 373 HPFLKKITMNNLSSLMSEYDSQSDTFGMPFL-PLPEDSMKCEGIVLIASLLCSCVRNVKL 431
+ + + +S ++ + + + S + E +I S V
Sbjct: 812 PAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEV-- 869
Query: 432 PHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 491
+ AA L S S+ E LP V+ ++ + L +L +I+
Sbjct: 870 ---KSAASYALGSISVGNLPE-----YLPFVLQEITS-QPKRQYLLLHSLKEIISSA--- 917
Query: 492 PPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDK 551
K + E I +L + EE R A + KL L L+ +
Sbjct: 918 SVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRL-------KGY 970
Query: 552 LSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQT-PSIRRALLQDI 610
L + S + + V + + + + + + + ++RR L
Sbjct: 971 LISGS---SYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTF 1027
Query: 611 GNLCSFFGQ--RQSNDFLLPILPAFLNDRDEQLRAV 644
+ R D +LP L R E +R V
Sbjct: 1028 NSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREV 1063
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 2e-12
Identities = 43/233 (18%), Positives = 69/233 (29%), Gaps = 45/233 (19%)
Query: 7 VHKKFWQETDKAAYLLRQYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 65
+ L+ + L+ K L ++ H+ I
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 125
H D+K N+L+ L L+DF K P + Y APE
Sbjct: 123 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ-------VVTRWYRAPE----- 170
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF------------------------- 160
+ +D++AVGC++AEL L VPF
Sbjct: 171 ----LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 226
Query: 161 ELSHLLAYRRGQYDPSQHLEKIP---DSGIRKMILHMIQLEPELRFSAESYLQ 210
++ L Y + P L I + +I + P R +A L+
Sbjct: 227 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.1 bits (163), Expect = 2e-12
Identities = 30/209 (14%), Positives = 64/209 (30%), Gaps = 21/209 (10%)
Query: 7 VHKKFWQETDKAAYLLRQYFFNSLRDRL---STPPFLSLVEKKWLAFQLLLAVKQCHEKG 63
V + Y++ ++ +S V ++A Q+ A++ +K
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 135
Query: 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 123
H D+ N LV + + ++DF + D + + AP
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLM------TGDTYTAHAGAKFPIKWTAP---- 185
Query: 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEK 181
+ D++A G ++ E+ P+ + Y + D +
Sbjct: 186 ------ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 239
Query: 182 IPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ +++ Q P R S Q
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.1 bits (160), Expect = 6e-12
Identities = 46/222 (20%), Positives = 76/222 (34%), Gaps = 58/222 (26%)
Query: 38 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 97
P + K + FQLL + H + H D+K +N+LVTS + L+DF + Y
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IY 166
Query: 98 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157
+ T L Y AP +V + +D+++VGC+ AE+F
Sbjct: 167 SFQMALTSVVVT----LWYRAP----------EVLLQSSYATPVDLWSVGCIFAEMFRRK 212
Query: 158 PFFE----------------------------LSHLLAYRRGQYDPSQHLEKIPDSGIRK 189
P F L + + + + I + G +
Sbjct: 213 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG-KD 271
Query: 190 MILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCC 231
++L + P R SA S L P+ + C
Sbjct: 272 LLLKCLTFNPAKRISAYSALS-----------HPYFQDLERC 302
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 7e-12
Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 17/173 (9%)
Query: 40 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 99
SL + +A ++ + + H D+ N +V + + DF + Y
Sbjct: 130 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----- 184
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EV 157
+D+ G + +++PE +D D+++ G V+ E+ E
Sbjct: 185 ETDYYRKGGKGLLPVRWMSPE----------SLKDGVFTTYSDVWSFGVVLWEIATLAEQ 234
Query: 158 PFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
P+ LS+ R + +++ Q P++R S +
Sbjct: 235 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 8e-12
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 47/236 (19%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFNSLRD--RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 63
V T+ YL+ ++ L+ S + L K FQLL + CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 123
+ H D+K +N+L+ + + L+DF + +P + L Y APE
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILL 175
Query: 124 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHL 179
++DI+++GC+ AE+ F E+ L R P + +
Sbjct: 176 GCKYYS---------TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 EKIP-------------------------DSGIRKMILHMIQLEPELRFSAESYLQ 210
D R ++ M+ +P R SA++ L
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (159), Expect = 1e-11
Identities = 25/210 (11%), Positives = 59/210 (28%), Gaps = 19/210 (9%)
Query: 5 PCVHKKFWQETDKAAYLLRQYFFNS--LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK 62
P V + L+ Q L + Q+ + ++
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 122
+ H D+ NVLV + + ++DF K + + + G + ++A E
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAK-----LLGAEEKEYHAEGGKVPIKWMALE-- 183
Query: 123 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLE 180
D+++ G + EL P+ + +
Sbjct: 184 --------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 181 KIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
I + +++ ++ + R +
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFRELII 265
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 64.9 bits (157), Expect = 1e-11
Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 46/235 (19%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
V T K L+ ++ L+ L L V K QLL + CH++ +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
H D+K +N+L+ L ++DF + F ++ + +Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADF--------------GLARAFGIPVRKYTHEIVTLWYR 167
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPS---- 176
+ ++DI++VGC+ AE+ P F E L+ R P+
Sbjct: 168 A--PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 177 ---------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
+ K D ++ M++L+P R +A+ L+
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.9 bits (157), Expect = 2e-11
Identities = 43/268 (16%), Positives = 83/268 (30%), Gaps = 61/268 (22%)
Query: 6 CVHKKFWQETDKAAYLLRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 64
+ + YL+ + + + +L E K + LL + H I
Sbjct: 79 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 138
Query: 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 124
H D+K NVL+T L L+DF + S + + + Y PE
Sbjct: 139 LHRDMKAANVLITRDGVLKLADFGLAR--AFSLAKNSQPNRYTNRVVTL-WYRPPE---- 191
Query: 125 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHL- 179
+ + P +D++ GC++AE++ P E L + + +
Sbjct: 192 -----LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246
Query: 180 ---------------------------EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212
+ D +I ++ L+P R ++ L
Sbjct: 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN-- 304
Query: 213 AAVVFPTYFSPFLHNFYCCWNPLHSDMR 240
F + +P+ SD++
Sbjct: 305 ---------HDFFWS-----DPMPSDLK 318
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.8 bits (156), Expect = 2e-11
Identities = 48/301 (15%), Positives = 81/301 (26%), Gaps = 37/301 (12%)
Query: 1023 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTV 1082
+ AD T + R R L + H + + + D VSAS D +
Sbjct: 24 ACADATLSQITNNIDPVGRIQMRTRRTL----RGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 1083 KVWDSRK----------------LEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126
+WDS S L+ ++ + R V
Sbjct: 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTL------VNYNTDNCASHMF 1180
G S V + T V + + +F
Sbjct: 140 AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 1181 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF 1240
+ + LWD R T E ++++ P GN F +GS L+DLR
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Query: 1241 LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVL 1300
+ ++ + + F L+ ++W+A VL
Sbjct: 258 DQELMTYSHDNIICGITSVSFSKSGR---------LLLAGYDDFNCNVWDALKADRAGVL 308
Query: 1301 R 1301
Sbjct: 309 A 309
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.4 bits (142), Expect = 1e-09
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 23/181 (12%)
Query: 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1116
H V ++++ D FVS + D++ K+WD R+ R T H A+C
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAIC--FFP 236
Query: 1117 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1176
+ G+ D +F + + +T V+++
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG------------ITSVSFSKS--- 281
Query: 1177 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1236
+ + + ++WD L + VS L G +GS L +W
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 1237 D 1237
+
Sbjct: 340 N 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.8 bits (112), Expect = 6e-06
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 1046 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1086
+ L H + V+ + ++ D + S DS +K+W+
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.9 bits (107), Expect = 3e-05
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1112
+ ++ S ++ DD VWD+ K ++ L H +R C
Sbjct: 265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR----AGVLAGH--DNRVSCL 318
Query: 1113 MMLRHSAQVVVGACDGIIHMFS 1134
+ V G+ D + +++
Sbjct: 319 GVTDDGMAVATGSWDSFLKIWN 340
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.9 bits (156), Expect = 3e-11
Identities = 42/357 (11%), Positives = 90/357 (25%), Gaps = 68/357 (19%)
Query: 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR 1108
+ V L+EH V + + D + V+ D VW +
Sbjct: 42 VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK--------------- 86
Query: 1109 ALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLV 1168
T+++ + + ++ + +D + I + V
Sbjct: 87 --PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV 144
Query: 1169 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP----------------EEGYV 1212
+ S + + + ++ P G+V
Sbjct: 145 LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204
Query: 1213 SSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1272
+ G+ S + L D + + + + ++
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADK---KMAVATLASETLPLLAVTFITESS----- 256
Query: 1273 ARPLIYVAAGC-NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1331
VAAG L+ ++ + D+P S R +
Sbjct: 257 -----LVAAGHDCFPVLFTYDSAAGKLSF--------GGRLDVPKQS---SQRGLTARER 300
Query: 1332 RRNVNQKYRVDELNEPPPRLLG-----IRSLLPLPGGD-----LLTGGTDLKIRRWD 1378
+N+++K + L + + L GG T G D + WD
Sbjct: 301 FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.5 bits (142), Expect = 2e-09
Identities = 41/423 (9%), Positives = 99/423 (23%), Gaps = 70/423 (16%)
Query: 1052 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC 1111
A+ ++ A + D + ++ V +++ L H +
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG--NKWVQVHELKEHNGQVTGVD 58
Query: 1112 TMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYN 1171
S ++V D +++++ + V +
Sbjct: 59 WA--PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARC-------------VRW 103
Query: 1172 TDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG 1231
N ++ I ++ ++ P V SL P +GS
Sbjct: 104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163
Query: 1232 VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1291
++ + + + S++ + V N +
Sbjct: 164 KCRIFSAY----IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 1292 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351
+ S + ++ +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVT----------------------------- 250
Query: 1352 LGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQ 1411
+ L+ G D + + S G + S +
Sbjct: 251 -------FITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRL----------DVPKQSSQR 293
Query: 1412 VVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL---GSVKLNQRLLISSSRDGAI 1468
+ R+R K + AAA H++S+ + K ++ DG +
Sbjct: 294 GLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 353
Query: 1469 KVW 1471
+W
Sbjct: 354 SIW 356
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.2 bits (97), Expect = 4e-04
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 1057 HCSAVNEIAISHDHSF----FVSASDDSTVKVWDSRKLEKDIS 1095
H ++V++I++ F + D + +WD R LE +
Sbjct: 324 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALK 366
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 4e-11
Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 34/224 (15%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFN-SLRDRL----------------STPPFLSLVEKKWL 48
++ D Y++ +Y +LR+ L + LS +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 140
Query: 49 AFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 108
A+Q+ ++ K H D+ NVLVT N + ++DF + + +
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 109 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLL 166
++APE D D+++ G ++ E+F P+ +
Sbjct: 201 VK-----WMAPEAL----------FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 167 AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210
++ + + + M+ P R + + ++
Sbjct: 246 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.0 bits (152), Expect = 5e-11
Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 57/252 (22%)
Query: 8 HKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 67
K + + + S L K FQLL + CH + + H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125
Query: 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGG 127
D+K +N+L+ L L++F + IP S L Y P+ +
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFGAK- 177
Query: 128 EMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFF----ELSHLLAYRRGQYDPSQH---- 178
S+D+++ GC+ AEL P F L R P++
Sbjct: 178 --------LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 179 LEKIPD---------------------SGIRKMILHMIQLEPELRFSAESYLQNYAAVVF 217
+ K+PD + R ++ ++++ P R SAE LQ+
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH------ 283
Query: 218 PTYFSPFLHNFY 229
P+ +F
Sbjct: 284 -----PYFSDFC 290
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.4 bits (153), Expect = 7e-11
Identities = 43/245 (17%), Positives = 72/245 (29%), Gaps = 55/245 (22%)
Query: 20 YLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79
L + + + + L+ ++L +Q+L +K H I H D+K N+ V
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
Query: 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 139
L + DF Y APE
Sbjct: 158 CELKILDF----------GLARHTDDEMTGYVATRWYRAPEIMLNWM---------HYNQ 198
Query: 140 SMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQHLEKIPDSGIRKM----- 190
++DI++VGC++AEL F + L R P L K S +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 191 ----------------------ILHMIQLEPELRFSAE-----SYLQNYAAVVFPTYFSP 223
+ M+ L+ + R +A +Y Y P
Sbjct: 259 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADP 318
Query: 224 FLHNF 228
+ +F
Sbjct: 319 YDQSF 323
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (152), Expect = 7e-11
Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 37/221 (16%)
Query: 20 YLLRQYFFN-SLRDRLSTPPF-------LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71
+L+ Y + SL D L+ L+L LA + V + I H D+K
Sbjct: 77 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136
Query: 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV 131
+N+LV ++D + D D + G KR Y+APE +
Sbjct: 137 KNILVKKNGTCCIADL-GLAVRHDSATDTIDIAPNHRVGTKR--YMAPEVLDDSINMKHF 193
Query: 132 AQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR-----GQYDPSQHLEKIPDSG 186
DI+A+G V E+ + + + + +
Sbjct: 194 ----ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249
Query: 187 IR-----------------KMILHMIQLEPELRFSAESYLQ 210
+R K++ R +A +
Sbjct: 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (150), Expect = 9e-11
Identities = 29/191 (15%), Positives = 64/191 (33%), Gaps = 18/191 (9%)
Query: 23 RQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 82
++ + FL+L +FQ+ ++ + H D+ N+L++ N +
Sbjct: 114 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 173
Query: 83 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142
+ DF + Y D+ D L ++A + D D
Sbjct: 174 KICDFGLARDIY----KDPDYVRKGDARLP-LKWMA----------PETIFDRVYTIQSD 218
Query: 143 IFAVGCVIAELF--LEVPFFELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEP 199
+++ G ++ E+F P+ + RR + + + +L EP
Sbjct: 219 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEP 278
Query: 200 ELRFSAESYLQ 210
R + ++
Sbjct: 279 SQRPTFSELVE 289
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (148), Expect = 2e-10
Identities = 48/356 (13%), Positives = 97/356 (27%), Gaps = 40/356 (11%)
Query: 1044 WR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE----------- 1091
WR L+ H V + + VS SDD+T+KVW + +
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 1092 -KDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1149
R + R L + + + G+ +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 1150 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1209
+ DI+ + + + + + +WD + + TL+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179
Query: 1210 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV 1269
Y G VSGS + +WD+ +++ Q N
Sbjct: 180 VYSLQ----FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL----TSGMELKDN--- 228
Query: 1270 STTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKT 1329
++ + V +W+ + G C Q L+ N + + S+ T
Sbjct: 229 ------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL-QFNKNFVITSSDDGT 281
Query: 1330 DLRRNVNQKYRVDELNEPPPRLLG--IRSLLPLPGGDLLTGGT-----DLKIRRWD 1378
++ + L G + + + G+ + K+ D
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 1e-09
Identities = 44/220 (20%), Positives = 71/220 (32%), Gaps = 47/220 (21%)
Query: 21 LLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80
+ + + R L ++ K +QL ++ H GICH DIK +N+L+
Sbjct: 100 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT 159
Query: 81 -WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 139
L L DF S K + +P + Y APE +
Sbjct: 160 AVLKLCDFGSAK--QLVRGEP------NVSYICSRYYRAPELIFGAT---------DYTS 202
Query: 140 SMDIFAVGCVIAELFL-EVPFFELSHLLAYRR-----GQYDPSQHLEKIPDSGIRKM--- 190
S+D+++ GCV+AEL L + F S + G Q E P+ K
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262
Query: 191 --------------------ILHMIQLEPELRFSAESYLQ 210
+++ P R +
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (145), Expect = 1e-09
Identities = 42/373 (11%), Positives = 101/373 (27%), Gaps = 13/373 (3%)
Query: 164 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSP 223
+ + + ++ + + + T P
Sbjct: 225 EACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVP 284
Query: 224 FLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQER 283
N + + N I + +S +
Sbjct: 285 AFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQI---LPCIKELVSDANQHVK 341
Query: 284 VTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNS 343
++ + + + ++ + + L D + SN + + +
Sbjct: 342 SALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQ 401
Query: 344 TFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEY--DSQSDTFGMP 401
+ + + ++ + +I + + L+SL + D
Sbjct: 402 SLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAA 461
Query: 402 FLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHY--RRAAILLLKSSSLFIDDEDRLQRVL 459
L + K A+++ + P+Y R + + S + + +L
Sbjct: 462 TSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHML 521
Query: 460 PHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVR 519
P V+ M DP A VR ++L I P++ D + P+L L D + V+
Sbjct: 522 PTVLRMAGDPVANVRFNVAKSLQKIGPIL------DNSTLQSEVKPILEKLTQDQDVDVK 575
Query: 520 ICYASNIAKLALT 532
+ L+L
Sbjct: 576 YFAQEALTVLSLA 588
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.0 bits (141), Expect = 3e-09
Identities = 57/320 (17%), Positives = 107/320 (33%), Gaps = 17/320 (5%)
Query: 432 PHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 491
R +I L + +L + E +LP + + D V A E L LV
Sbjct: 24 VQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE-VLLALAEQLGTFTTLV--- 79
Query: 492 PPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDK 551
+ +LP L L E VR ++ ++ HS EA +
Sbjct: 80 ---GGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHE------HSPSDLEAHFVPL 130
Query: 552 LSAPHKSPSSSNETSV-QLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDI 610
+ ++ TS L + S ++ + + + L TP +RRA +
Sbjct: 131 VKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCS--DDTPMVRRAAASKL 188
Query: 611 GNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIE 670
G ++P+ +D + +R + V + + + +E ++P +
Sbjct: 189 GEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLR 248
Query: 671 QALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAA 730
QA D + V D L K+ + +++ L+ VR + +
Sbjct: 249 QAAEDKSWRVRYMVADKFTELQKAVG-PEITKTDLVPAFQNLMKDCEAEVRAAASHKVKE 307
Query: 731 SSESLGAVDSYVFLAPVIRP 750
E+L A + I P
Sbjct: 308 FCENLSADCRENVIMSQILP 327
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (124), Expect = 3e-07
Identities = 26/191 (13%), Positives = 67/191 (35%), Gaps = 8/191 (4%)
Query: 571 RLNADVQLSQL------RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND 624
RLN+ +LS + ++ +E++ L + AL + +G + G +
Sbjct: 27 RLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVH 86
Query: 625 FLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNA 684
LLP L + + +R + + +E + +P +++ +A
Sbjct: 87 CLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSA 146
Query: 685 LDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFL 744
++ + + E+ + L + VRR+ + + ++ L + +
Sbjct: 147 CGLFSVCYP--RVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEI 204
Query: 745 APVIRPFLRRQ 755
P+ +
Sbjct: 205 IPMFSNLASDE 215
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (124), Expect = 3e-07
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 3/125 (2%)
Query: 598 QTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG 657
+IR A ++ L FG+ ++ ++P + A D + R I + G
Sbjct: 453 HVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 512
Query: 658 ERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAF-PLLCYP 716
+ +++LP + + D V N L + L L ++ L
Sbjct: 513 QDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGP--ILDNSTLQSEVKPILEKLTQDQ 570
Query: 717 SQWVR 721
V+
Sbjct: 571 DVDVK 575
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (99), Expect = 3e-04
Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 16/272 (5%)
Query: 422 LCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETL 481
+ + H + A ++ S + ++ ++ +LP +A L D VR + L
Sbjct: 328 CIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNL 387
Query: 482 CDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLA--LTAYGFLVH 539
+ ++ S + +LP + L +D + VR+ + LA L F
Sbjct: 388 DCVNEVIGIRQLS------QSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEK 441
Query: 540 SIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQT 599
L A ++D + A ++ +S+ L++L +I V + P
Sbjct: 442 LNSLCMAWLVDHVYAIREAATSN------LKKLVEKFGKEWAHATIIPKVLAMSGDPN-- 493
Query: 600 PSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGER 659
R L I L GQ + +LP + D +R + + +
Sbjct: 494 YLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS 553
Query: 660 SVEEYLLPYIEQALSDATEAVIVNALDCLAIL 691
+++ + P +E+ D V A + L +L
Sbjct: 554 TLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (96), Expect = 7e-04
Identities = 43/184 (23%), Positives = 64/184 (34%), Gaps = 11/184 (5%)
Query: 622 SNDFLLPI--LPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEA 679
+D L PI L L + D QLR ++ + +G LLP++ + D E
Sbjct: 5 GDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE- 63
Query: 680 VIVNALDCLAILCK--SGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGA 737
V++ + L G LL +E L VR V + A S
Sbjct: 64 VLLALAEQLGTFTTLVGGPEYVHCLLPPLES---LATVEETVVRDKAVESLRAISHEHSP 120
Query: 738 VDSYVFLAPVI-RPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARS--SDMLERQ 794
D P++ R S S L S P VS V ++ + R+ SD
Sbjct: 121 SDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMV 180
Query: 795 RKIW 798
R+
Sbjct: 181 RRAA 184
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 3e-09
Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 18/174 (10%)
Query: 40 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 99
L L + ++Q+ + K H D+ N+L+T + DF + +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKN 197
Query: 100 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVP 158
S++ + + ++AP + + D+++ G + ELF L
Sbjct: 198 DSNYVVKGNARLP-VKWMAP----------ESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 159 FFELSHLLAYRRGQYDPSQHLEKIPD--SGIRKMILHMIQLEPELRFSAESYLQ 210
+ + + + + + ++ +P R + + +Q
Sbjct: 247 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 56.9 bits (135), Expect = 5e-09
Identities = 28/332 (8%), Positives = 77/332 (23%), Gaps = 38/332 (11%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1107
G + H A+ ++ S D SA + + WD +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD-----------------ISTG 44
Query: 1108 RALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTL 1167
+ H+ + +F V + + + + +
Sbjct: 45 ISNRVFPDVHATMITGIKTTSKGDLF----------TVSWDDHLKVVPAGGSGVDSSKAV 94
Query: 1168 VNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSG 1227
N + + + + L +P S + +
Sbjct: 95 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVA-- 152
Query: 1228 SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287
+ K + + + + +V
Sbjct: 153 --------VGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVI 204
Query: 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS-SRSNPKTDLRRNVNQKYRVDELNE 1346
++ N + + + S + + N+N+ + +
Sbjct: 205 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK 264
Query: 1347 PPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWD 1378
+ + S++ L +++ G D I+ W+
Sbjct: 265 GAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.4 bits (100), Expect = 1e-04
Identities = 7/72 (9%), Positives = 21/72 (29%)
Query: 1169 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGS 1228
+ + + + + + +W+ S+ + + V VS
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Query: 1229 SRGVLTLWDLRF 1240
+ W++ F
Sbjct: 288 QDSNIKFWNVPF 299
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 9e-04
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 1045 RPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1086
+P + H + I + + VSA DS +K W+
Sbjct: 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 876 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (139), Expect = 6e-09
Identities = 43/319 (13%), Positives = 94/319 (29%), Gaps = 47/319 (14%)
Query: 346 SQDLRNSSVESSGELLQSISDAFRKNGHPFLKKI---TMNNLSSLMSEYDSQSD-----T 397
S R + L ++ + RK H +I M +L +
Sbjct: 570 STSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDAL 629
Query: 398 FGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLK--SSSLFIDDEDRL 455
+ L + + L ++N AA+ L+ +L +
Sbjct: 630 MAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFC 689
Query: 456 QRVLPHVIAMLSDPAAI--VRCAALETLCDILPLVRNFPPSDAKIFPEYILPML---SML 510
V+ ++ L + V+ L DI + + K + E +L L S
Sbjct: 690 DEVMQLLLENLGNENVHRSVKPQILSVFGDIALAI----GGEFKKYLEVVLNTLQQASQA 745
Query: 511 PDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQ 570
D + + Y + + + L AY +V ++ + V +
Sbjct: 746 QVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVML---------------- 789
Query: 571 RLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQR-----QSNDF 625
+ + I + + T + IG+LC+ FG+ ++
Sbjct: 790 -------VQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPM 842
Query: 626 LLPILPAFLNDRDEQLRAV 644
+ +L + + + +
Sbjct: 843 IHELLTEGRRSKTNKAKTL 861
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 7e-09
Identities = 43/249 (17%), Positives = 76/249 (30%), Gaps = 55/249 (22%)
Query: 16 DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75
D + L F + +L L ++L +Q+L ++ H GI H D+K N+
Sbjct: 94 DFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 153
Query: 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135
V L + DF + Y APE +
Sbjct: 154 VNEDCELKILDFGLARQADSEM----------TGYVVTRWYRAPE---------VILNWM 194
Query: 136 PLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYR---RGQYDPSQHLEKIPDSGIRKM- 190
++DI++VGC++AE + + F HL + + P + S K
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254
Query: 191 --------------------------ILHMIQLEPELRFSAE-----SYLQNYAAVVFPT 219
+ M+ L+ E R +A Y ++
Sbjct: 255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEP 314
Query: 220 YFSPFLHNF 228
+ +F
Sbjct: 315 QVQKYDDSF 323
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 56.3 bits (134), Expect = 1e-08
Identities = 35/330 (10%), Positives = 88/330 (26%), Gaps = 27/330 (8%)
Query: 1064 IAISHDHSFFVSASDDSTVKVWD--SRKLEKDISFRSR-----LTYHLEGSRALCTMMLR 1116
A+ H + + + + + V D S + K + + A
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 1117 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1176
+ ++ + +G IS K+ V T
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-------VYATVNPTQ--- 111
Query: 1177 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1236
Y + + ++ T ++ P V + G+ +V+G + +
Sbjct: 112 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK 171
Query: 1237 DLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC 1296
++ V + +++ L+ P + + ++ A+
Sbjct: 172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 1297 HQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL---- 1352
+ + G T + + D + R+ + + +L+
Sbjct: 232 YLSVDLKT--GKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN 289
Query: 1353 ---GIRSLLPLPGGDLL-TGGTDLKIRRWD 1378
+ GD L GGT + ++
Sbjct: 290 LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN 319
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 41.6 bits (96), Expect = 5e-04
Identities = 18/302 (5%), Positives = 63/302 (20%), Gaps = 62/302 (20%)
Query: 1056 EHCSAVNEIAISHDHSF-FVSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGSRALCT 1112
++ D+ +V + + D + K + S +
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 1113 MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN--- 1169
V + + V + + ++ +
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 1170 --YNTDNCASHMFMYSTQ-----------------NCGIHLWDTRSNSNTWTLKAIPEEG 1210
Y M + + + ++ W +S + ++
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS-------M 209
Query: 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDL-------RFLVPVNSWQYSQVCPIEKMCLFVP 1263
+ + DL + + ++ + +
Sbjct: 210 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 269
Query: 1264 PPN-------------AAVSTTARP----------LIYVAAGCNEVSLWNAENGSCHQVL 1300
N A + +Y+ N+++++N + + +
Sbjct: 270 VLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Query: 1301 RT 1302
+
Sbjct: 330 KL 331
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 38.6 bits (88), Expect = 0.004
Identities = 5/49 (10%), Positives = 13/49 (26%)
Query: 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK 1092
+ + + +A + + V++ LEK
Sbjct: 277 YDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.3 bits (132), Expect = 3e-08
Identities = 48/233 (20%), Positives = 81/233 (34%), Gaps = 31/233 (13%)
Query: 6 CVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 65
+ E + YL+ + +L + +L +Q+L +K H GI
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL--DHERMSYLLYQMLCGIKHLHSAGII 141
Query: 66 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 125
H D+K N++V S L + DF + + + T Y APE
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVT----RYYRAPEVILGM 193
Query: 126 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 185
K ++DI++VGC++ E+ F D K+ +
Sbjct: 194 ----------GYKENVDIWSVGCIMGEMVRHKILFP----------GRDYIDQWNKVIEQ 233
Query: 186 GIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSD 238
M +L+P +R E+ + YA + FP F L N L +
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPK-YAGLTFPKLFPDSLFPADSEHNKLKAS 285
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.1 bits (128), Expect = 5e-08
Identities = 39/268 (14%), Positives = 73/268 (27%), Gaps = 35/268 (13%)
Query: 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFR--------SRLTY 1102
+ E V + +D VS D+T+K+WD LE +
Sbjct: 8 IHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 1103 HLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEG 1162
+ + + + + I H +V H+ G + S I D
Sbjct: 66 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 125
Query: 1163 AIVTLVNYNTDNCASHMFMYS--------TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214
+TL + A+ + + + I +W+T + TL
Sbjct: 126 TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 185
Query: 1215 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR 1274
VSGSS + LWD+ + + +
Sbjct: 186 ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN------------- 228
Query: 1275 PLIYVAAGCNEVSLWNAENGSCHQVLRT 1302
I A ++ +W+ +
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAG 256
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 1e-06
Identities = 39/210 (18%), Positives = 62/210 (29%), Gaps = 38/210 (18%)
Query: 1035 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1094
R+ ++ D L L H +AVN + D + VSAS D T+KVW++ E
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVV--DFDDKYIVSASGDRTIKVWNTSTCE--- 169
Query: 1095 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDI 1154
L G + + VV G+ D I ++ DI
Sbjct: 170 -----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-------------------DI 205
Query: 1155 KKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE------ 1208
+ + + + I +WD + +
Sbjct: 206 ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 265
Query: 1209 -EGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1237
G V L VS S + +WD
Sbjct: 266 HSGRVFRLQ--FDEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 1e-04
Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 37/280 (13%)
Query: 1219 PCGNWFVSGSSRGVLTLWDLRFL----------VPVNSWQYSQVCPIEKMCLFVPPPNAA 1268
VSG + +WD L V QY + I
Sbjct: 23 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDV 82
Query: 1269 VS-----------------TTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEM 1311
+ ++ + +++W+ + + + R
Sbjct: 83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 142
Query: 1312 SDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTD 1371
+ S S +T N + V LN + + +++G +D
Sbjct: 143 VV-DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL----QYRDRLVVSGSSD 197
Query: 1372 LKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431
IR WD + G + S + K L + L +A
Sbjct: 198 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD--GKIKVWDLVAALDPRAPA 255
Query: 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471
+ H + ++ ++ ++SSS D I +W
Sbjct: 256 GTLCLRTLVEHSGRVFR---LQFDEFQIVSSSHDDTILIW 292
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 54.1 bits (129), Expect = 5e-08
Identities = 36/241 (14%), Positives = 83/241 (34%), Gaps = 62/241 (25%)
Query: 11 FWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69
+ L+ ++ N + T L+ + ++ +++L A+ CH GI H D+
Sbjct: 99 VKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDV 155
Query: 70 KCENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGE 128
K NV++ + L L D+ + F+ G + +A F
Sbjct: 156 KPHNVMIDHEHRKLRLIDWG--------------LAEFYHPGQEYNVRVASRYFKGP--- 198
Query: 129 MQVAQDAPLKPSMDIFAVGCVIAEL-FLEVPFFE-------------------------- 161
+ S+D++++GC++A + F + PFF
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 258
Query: 162 ------------LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209
L R ++ S++ + + + +++ + + R +A +
Sbjct: 259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD-FLDKLLRYDHQSRLTAREAM 317
Query: 210 Q 210
+
Sbjct: 318 E 318
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.9 bits (125), Expect = 2e-07
Identities = 24/218 (11%), Positives = 60/218 (27%), Gaps = 10/218 (4%)
Query: 1026 DLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVW 1085
+ ++ S V + IS + ++ TV++
Sbjct: 152 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-GLIATGFNNGTVQIS 210
Query: 1086 DSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNV 1145
+ L +F S+ + + + + + ++ +
Sbjct: 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET-EFGERI 269
Query: 1146 EKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1205
S + + E A + V + N + + + + WD ++ TL
Sbjct: 270 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM 329
Query: 1206 IPE--EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL 1241
+ E L G+ ++D++FL
Sbjct: 330 HCDDIEIEEDILAVDEHGDSLAEPG------VFDVKFL 361
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.7 bits (114), Expect = 4e-06
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 28/229 (12%)
Query: 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1113
+ H + + ++ + F VS S D +KVWD++ L+ + ++ + S
Sbjct: 10 GKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 1114 MLRHSAQ-------VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT 1166
+L+ + V + G + + + + + + K
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRIT--REDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 1167 LVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT----------------LKAIPEEG 1210
+ D SH + + ++W ++ +
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1259
+ +S+ G +G + G + + +L L P+ +++
Sbjct: 186 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 7e-05
Identities = 23/208 (11%), Positives = 56/208 (26%), Gaps = 19/208 (9%)
Query: 1051 VAHLQEHCSAVNEIAISHD-----HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLE 1105
+ + + V+ T +W + + +
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 1106 GSRALCTMMLRHSAQV-----------VVGACDGIIHMFSVDHISRGLGNVEKYSGISDI 1154
+ + S G +G + + + + ++S I++
Sbjct: 172 ELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 231
Query: 1155 KKKDTKEGAIVTLVNYNT--DNCASHMFMYSTQNC-GIHLWDTRSNSNTWTLKAIPEEGY 1211
+ + + + N + +Y T+ I ++S+ +L +
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291
Query: 1212 VSSLVTGPCGNWFVSGSSRGVLTLWDLR 1239
V SL G S G L WD++
Sbjct: 292 VMSLSFNDSGETLCSAGWDGKLRFWDVK 319
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 5e-04
Identities = 24/253 (9%), Positives = 60/253 (23%), Gaps = 18/253 (7%)
Query: 1067 SHDHSFFVSASDDSTVKVWDSRKLEKDISFRS------RLTYHLEGSRALC---TMMLRH 1117
+ + + S + + + ++ AL +
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 1118 SAQVVVGACDGIIHMFSV----DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD 1173
S ++V G +++ D + N + + T V+ +
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 195
Query: 1174 NCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG-- 1231
+ F T + I + S+ P G+
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 1232 -VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVP--PPNAAVSTTARPLIYVAAGCNEVSL 1288
+TL++ F + S + F + + + A ++
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 315
Query: 1289 WNAENGSCHQVLR 1301
W+ + L
Sbjct: 316 WDVKTKERITTLN 328
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.6 bits (93), Expect = 0.001
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1268
+ + S+ C ++ VS S G L +WD + L N S + K L A
Sbjct: 14 DADIFSVS--ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 1269 VSTTARPLIYVAAGC--NEVSLWNAENGSCHQVLR 1301
+ A L VA ++ + + +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVI 106
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.5 bits (124), Expect = 2e-07
Identities = 22/255 (8%), Positives = 59/255 (23%), Gaps = 29/255 (11%)
Query: 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRA 1109
+V Q +++I I S + S D ++ V+ K++ L Y
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY---KHPL 59
Query: 1110 LCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN 1169
LC + ++ + + L
Sbjct: 60 LCCNFIDNTDLQIYVGTVQGEILKVDLI---------------GSPSFQALTNNEANLGI 104
Query: 1170 YNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS----SLVTGPCGNWFV 1225
+ ++ + I + D R+ + + +
Sbjct: 105 CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164
Query: 1226 SGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285
G + + + L N + + + P + ++
Sbjct: 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE-------QEGYACSSIDGR 217
Query: 1286 VSLWNAENGSCHQVL 1300
V++ ++
Sbjct: 218 VAVEFFDDQGDDYNS 232
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 50.2 bits (118), Expect = 9e-07
Identities = 24/204 (11%), Positives = 50/204 (24%), Gaps = 18/204 (8%)
Query: 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRAL 1110
E + +A + D S D V ++ L +D +S
Sbjct: 127 RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE-------- 178
Query: 1111 CTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY 1170
A G++ + + + + D + G +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDI-DPADPTAYRTGLLTMDLETGEMAMREVR 237
Query: 1171 NTDNCASHMFMYSTQN------CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF 1224
D + + + +D N++ +P S+ G+
Sbjct: 238 IMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR---VPLPHSYYSVNVSTDGSTV 294
Query: 1225 VSGSSRGVLTLWDLRFLVPVNSWQ 1248
G + G L +D L
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVD 318
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 8e-04
Identities = 19/302 (6%), Positives = 65/302 (21%), Gaps = 47/302 (15%)
Query: 1054 LQEHCSAVNEIAISHDHSF-FVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1112
+ + ++ + + + ++ D + + T
Sbjct: 29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLSTPEERVKSLFGA 87
Query: 1113 MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT------ 1166
+ + + + + + + + + + ++ ++
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147
Query: 1167 -LVNYNTDNCASHMF------MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP 1219
L D Q+ + W
Sbjct: 148 KLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207
Query: 1220 CGNWFVSGSSRGVLTLWDL-------RFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1272
+ + R L DL R + ++ + +S K F
Sbjct: 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDL 267
Query: 1273 ARP----------------------LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTE 1310
+ +++ +++ ++AE + + G+
Sbjct: 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL---EKKGQVDLPGNAS 324
Query: 1311 MS 1312
MS
Sbjct: 325 MS 326
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.8 bits (91), Expect = 0.002
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1103
+ + + +S D S + +D+ LEK + ++
Sbjct: 265 FDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK----KGQVDLP 320
Query: 1104 LEGSRALCTMML 1115
S +L ++ L
Sbjct: 321 GNASMSLASVRL 332
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 2e-06
Identities = 34/312 (10%), Positives = 79/312 (25%), Gaps = 20/312 (6%)
Query: 1005 MGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEI 1064
G G+ S +V + P + IP + + H V +
Sbjct: 4 QGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ------INTLNHGEVVCAV 57
Query: 1065 AISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1124
IS+ + VKVWD + S S+L + +L ++VG
Sbjct: 58 TISNPTRHVYTGGKG-CVKVWDISH-PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
Query: 1125 ACDGIIHMFSVDHISRGLGNVEKYSGIS----DIKKKDTKEGAIVTLVNYNTDNCASHMF 1180
+ ++ + + + S + I + + N + +
Sbjct: 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175
Query: 1181 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL----- 1235
+ Q +++ L + V S + + +L
Sbjct: 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235
Query: 1236 ---WDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292
+ + ++ L + N ++ W
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295
Query: 1293 NGSCHQVLRTAN 1304
G+ + ++
Sbjct: 296 YGASIFQSKESS 307
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 7e-05
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1112
L H S V + ++ +FVS D+ + W + + E S L
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-------ESSSVLSC 312
Query: 1113 MMLRHSAQVVVGACDGIIHMFSV 1135
+ +V G+ D ++ V
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 7e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1086
WR + S+V IS D + V+ S D V++
Sbjct: 292 WRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 1e-04
Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 1177 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1236
F+ + ++ ++ W T ++ + K E V S + V+GS T++
Sbjct: 277 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Query: 1237 DLRF 1240
++ +
Sbjct: 334 EVIY 337
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.9 bits (115), Expect = 3e-06
Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 15/139 (10%)
Query: 24 QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWL 82
+ + L+ K ++ QLLL + H + GI H DIK ENVL+ +
Sbjct: 106 LGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS- 164
Query: 83 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142
+ K + D + Y +PE V AP D
Sbjct: 165 -PENLIQIKIADLGNACWYDEHYTNSIQ--TREYRSPE----------VLLGAPWGCGAD 211
Query: 143 IFAVGCVIAELFLEVPFFE 161
I++ C+I EL FE
Sbjct: 212 IWSTACLIFELITGDFLFE 230
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.1 bits (111), Expect = 3e-06
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 48 LAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 106
+ +L V + + +GI HGD+ NVLV+ +++ DF P + +
Sbjct: 108 VLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDF----PQSVEVGEEGWREIL 161
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 37/331 (11%), Positives = 83/331 (25%), Gaps = 52/331 (15%)
Query: 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRA 1109
++ + H + + ++ +S S D + W S + +D S + +
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEY 60
Query: 1110 LCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN 1169
+ + + G V I + T + +N
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 1170 YNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI--PEEGYVSSLVTGPCGNWFVSG 1227
+ + + S+ + P S + P + +G
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 1228 SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287
G + L+DL+ S + I + A L+ + +
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1347
+++ + A+ D
Sbjct: 241 IYSVKRPMKIIKALNAHKD----------------------------------------- 259
Query: 1348 PPRLLGIRSLLPLPGGDLLTGGTDLKIRRWD 1378
G+ +LL L++ G D I+RW+
Sbjct: 260 -----GVNNLLWETPSTLVSSGADACIKRWN 285
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 1e-05
Identities = 45/386 (11%), Positives = 114/386 (29%), Gaps = 50/386 (12%)
Query: 349 LRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFG--------- 399
++NS ++ + +++ L +L +E S
Sbjct: 60 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 119
Query: 400 MPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVL 459
+P PE + + + + + AI + +D+ +L
Sbjct: 120 IPVNQWPELIPQLV------ANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEIL 173
Query: 460 PHVIAML--SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEES 517
+I + +P+ V+ AA L + L + D + +I+ ++ P+
Sbjct: 174 TAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANF--DKESERHFIMQVVCEATQCPDTR 231
Query: 518 VRICYASNIAKLALTAYGFLVH-------------------SIRLSEAGVLDKLSAPHKS 558
VR+ N+ K+ Y ++ + L +
Sbjct: 232 VRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMD 291
Query: 559 PSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELV--------MGPKQTPSIRRALLQDI 610
+ + + R + ++ +V L + +A +
Sbjct: 292 LAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCL 351
Query: 611 GNLCSFFGQRQSNDFLLPILPAFLNDRDEQLR---AVFYGQIVYVCFFVGERSVEEYLLP 667
L + +LP + + + D + R + +G I+ + + +P
Sbjct: 352 MLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMP 410
Query: 668 YIEQALSDATEAVIVNALDCLAILCK 693
+ + + D + V A + +C+
Sbjct: 411 TLIELMKDPSVVVRDTAAWTVGRICE 436
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (102), Expect = 1e-04
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 18/171 (10%)
Query: 349 LRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPED 408
+ S G + S + K +L I L+ D
Sbjct: 294 IEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLML 353
Query: 409 SMKCEG---IVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDE---DRLQRVLPHV 462
C + + + ++N YR AA++ + + + +P +
Sbjct: 354 LATCCEDDIVPHVLPFIKEHIKNPD-WRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL 412
Query: 463 IAMLSDPAAIVRCAALETL---CDILPLVRNFPPSDAKIFPEYILPMLSML 510
I ++ DP+ +VR A T+ C++LP +A I Y+ P+L L
Sbjct: 413 IELMKDPSVVVRDTAAWTVGRICELLP--------EAAINDVYLAPLLQCL 455
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.6 bits (106), Expect = 3e-05
Identities = 17/198 (8%), Positives = 47/198 (23%), Gaps = 21/198 (10%)
Query: 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSR---L 1100
+ G + S A D S S D L S+ +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Query: 1101 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTK 1160
+ +++ + + S ++ G + +
Sbjct: 224 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPG--DYRMIIPLESS------ 275
Query: 1161 EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPC 1220
+ + + + + + + + +D + T K + ++ L
Sbjct: 276 ----ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK------TRKVTEVKNNLTDLRLSAD 325
Query: 1221 GNWFVSGSSRGVLTLWDL 1238
+ G + + L
Sbjct: 326 RKTVMVRKDDGKIYTFPL 343
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.2 bits (105), Expect = 4e-05
Identities = 25/327 (7%), Positives = 63/327 (19%), Gaps = 30/327 (9%)
Query: 1057 HCSAVNEIAISHDHSFFVSASDDS--TVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMM 1114
+ + D + ++D +A
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD-----------------YRTGKAEKFEE 83
Query: 1115 LRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDN 1174
+ + +G + + D ++E + ++ N
Sbjct: 84 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 143
Query: 1175 CASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLT 1234
+ T + A E + + S R +
Sbjct: 144 YGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDP 203
Query: 1235 LWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1294
D V ++ + V + L PN +
Sbjct: 204 SPDRV----VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL----NDMYKR 255
Query: 1295 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL-- 1352
S + +Y + ++ P ++ +
Sbjct: 256 SSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN 315
Query: 1353 GIRSLLPLPGGD-LLTGGTDLKIRRWD 1378
+ L ++ D KI +
Sbjct: 316 NLTDLRLSADRKTVMVRKDDGKIYTFP 342
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.8 bits (91), Expect = 0.002
Identities = 6/36 (16%), Positives = 15/36 (41%)
Query: 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRK 1089
+ E + + ++ +S D + DD + + K
Sbjct: 310 VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 4e-05
Identities = 38/328 (11%), Positives = 94/328 (28%), Gaps = 29/328 (8%)
Query: 1054 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1113
L+ H ++V + + ++ ++ +DD ++V+DS + F +L+ H G AL
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALK-- 60
Query: 1114 MLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD 1173
H +V G+ D + ++ + S + +
Sbjct: 61 -YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC---------------LDIVE 104
Query: 1174 NCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1233
+ +++ +H+W S ++ EE + P N + G RG +
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKLPKES---SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 161
Query: 1234 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAEN 1293
S + + +S + +A
Sbjct: 162 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
Query: 1294 GS--CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1351
+ L + R S + ++ D +
Sbjct: 222 DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH 281
Query: 1352 LGIRSLLPL-PGGDLLTGGTDLKIRRWD 1378
+ ++ ++L G++ + ++
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYN 309
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 9e-05
Identities = 33/299 (11%), Positives = 83/299 (27%), Gaps = 50/299 (16%)
Query: 361 LQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIAS 420
L ++ + P + L + + + + S+ + +
Sbjct: 580 LAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLET 639
Query: 421 L--LCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDR--LQRVLPHVIAMLSDPAAI--VR 474
N A+ + S ++++ R ++ + M+S+P A ++
Sbjct: 640 FSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELK 699
Query: 475 CAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVR--ICYASNIAKLALT 532
A L DI N + + ++ PE + Y + + L
Sbjct: 700 PAVLSVFGDI---ASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLD 756
Query: 533 AYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQEL 592
AY +V + + L +I + + ++
Sbjct: 757 AYVGIVAGLH------------------------------DKPEALFPYVGTIFQFIAQV 786
Query: 593 VMGPK--QTPSIRRALLQDIGNLCSFFGQRQSNDFLL-PILPAFL------NDRDEQLR 642
P+ + RA + IG++ + F F + ++ + +
Sbjct: 787 AEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATK 845
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.7 bits (101), Expect = 9e-05
Identities = 28/274 (10%), Positives = 62/274 (22%), Gaps = 39/274 (14%)
Query: 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD--------------------S 1087
EH S + S V++WD
Sbjct: 48 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD 107
Query: 1088 RKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEK 1147
+ + + + E + S + G + + + +
Sbjct: 108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 167
Query: 1148 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207
+ ++ + K + + + + G N T +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 1208 ---------EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM 1258
G V L P G S S+ + +W++ L + IE
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT--RIEDQ 285
Query: 1259 CLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292
L + + + + ++ N E
Sbjct: 286 QLGIIW--------TKQALVSISANGFINFVNPE 311
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 5e-04
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 1169 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL-VTGPCGNWFVSG 1227
+ S F + I +WD ++ ++ + V +S
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 314
Query: 1228 SSRGVLTLWDL 1238
S G L ++L
Sbjct: 315 SLDGTLNFYEL 325
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 0.001
Identities = 25/285 (8%), Positives = 63/285 (22%), Gaps = 26/285 (9%)
Query: 966 LVSGSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPA 1025
+ + + V + A + GT + D +
Sbjct: 62 AHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 121
Query: 1026 DLTGLPSFVRTSSIPDSGWRPRGILVAH--LQEHCSAVNEIAISHDHSFFVSASDDSTVK 1083
P+ + R + V + D S A
Sbjct: 122 FYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 181
Query: 1084 VWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLG 1143
++ + + ++V G IH +D S
Sbjct: 182 EITHTEVFHPEDEFLINHP----------AYSQKAGRLVWPTYTGKIHQ--IDLSSGDAK 229
Query: 1144 NVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMY-------STQNCGIHLWDTRS 1196
+ +++ ++ D V Y+ ++ + T + + + D ++
Sbjct: 230 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 289
Query: 1197 NSNTWTLKAIPEEGYVSSLVTGPCGNW--FVSGSSRGVLTLWDLR 1239
+ S+ + + L + D
Sbjct: 290 GERLAK---FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 40.2 bits (92), Expect = 0.001
Identities = 29/276 (10%), Positives = 73/276 (26%), Gaps = 28/276 (10%)
Query: 1059 SAVNEIAISHDHSF-FVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117
S IS D + +V+ + + V + D+ + + + +
Sbjct: 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVT 91
Query: 1118 SAQV------------VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIV 1165
+ V G + G +G + +T A++
Sbjct: 92 NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151
Query: 1166 -TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF 1224
T+ + + + + S +T T I ++
Sbjct: 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211
Query: 1225 VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1284
V ++ ++ + + + P+ P AV+ + + + CN
Sbjct: 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-----PAGIAVTPDGKKVYVALSFCN 266
Query: 1285 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFAR 1320
VS+ + + + P+A +
Sbjct: 267 TVSVIDTATNTITATMAVGKN---------PYASGQ 293
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1472 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.95 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.94 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.92 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.89 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.87 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.87 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.86 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.85 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.8 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.79 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.78 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.77 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.74 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.72 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.71 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.6 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.45 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.38 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.34 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.32 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.14 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.12 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.02 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.0 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.95 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 98.91 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.88 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.84 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.79 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.7 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.69 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 98.69 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.68 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.59 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 98.56 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 98.43 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.41 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.37 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.36 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.35 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 98.29 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.28 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 98.11 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.04 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 98.03 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.02 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 98.01 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.93 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 97.85 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.84 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.79 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.73 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.73 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.71 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 97.63 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.56 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 97.5 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.11 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 96.98 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 96.94 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.92 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 96.88 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.63 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.38 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.16 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 96.12 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.07 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 95.87 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 95.55 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.47 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 95.29 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 95.05 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 94.48 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 94.18 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 93.72 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 93.25 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.12 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 92.88 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 92.68 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 91.78 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 91.48 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 89.72 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 86.52 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-42 Score=286.23 Aligned_cols=305 Identities=18% Similarity=0.272 Sum_probs=256.4
Q ss_pred CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 88555653634511234555589990799799999299979999399886442111105874169732799992499799
Q 000470 1042 SGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1042 ~~W~p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~l 1121 (1472)
..|.|++....+|.||+++|++++|+|++++|+|||.||+|+|||+.+++ ...++.+|...|.+++|++++..+
T Consensus 1 k~w~p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~------~~~~~~~h~~~V~~~~~~~~~~~~ 74 (317)
T d1vyhc1 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD------FERTLKGHTDSVQDISFDHSGKLL 74 (317)
T ss_dssp CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEEECCCCCC
T ss_conf 93689898448985888876899993898999999389929999899997------999995788867777630111101
Q ss_pred EEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 99917994999980112468886433468545233027998589999713799872199999589749999599898654
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1122 as~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~ 1201 (1472)
++++.++.+..|+.... ........+...+....++++ ++.+++++.|+.+++||++++....
T Consensus 75 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~ 137 (317)
T d1vyhc1 75 ASCSADMTIKLWDFQGF--------------ECIRTMHGHDHNVSSVSIMPN---GDHIVSASRDKTIKMWEVQTGYCVK 137 (317)
T ss_dssp EEEETTSCCCEEETTSS--------------CEEECCCCCSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCEEEECCCC---CCEEEEECCCCCEEEEECCCCEEEE
T ss_conf 11111111011100111--------------111110000000000001699---8557765267523575114430346
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCC-----------CC
Q ss_conf 0004787665389999699989999937993999978999510067415667720478425999974-----------44
Q 000470 1202 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA-----------VS 1270 (1472)
Q Consensus 1202 ~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~-----------~~ 1270 (1472)
.+.. |...+.++++++++.+|++|+.||.+++||++.+.....+.. +...+..+.+ .|..... ..
T Consensus 138 ~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 213 (317)
T d1vyhc1 138 TFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HRHVVECISW-APESSYSSISEATGSETKKS 213 (317)
T ss_dssp EEEC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEE-CCSCGGGGGGGCCSCC----
T ss_pred EECC--CCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCEEEEEEEC-CCCCCEEEEE-EECCCCCEEECCCCCEEEEE
T ss_conf 8716--777630000166799999992798299975125403478824-7787337998-63256411103456303430
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68999799998699499998688717789861358898766877632358898899975332344533222344899988
Q 000470 1271 TTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPR 1350 (1472)
Q Consensus 1271 s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1350 (1472)
...+..+++++.++.|.+||+.++.+...+..+
T Consensus 214 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~----------------------------------------------- 246 (317)
T d1vyhc1 214 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH----------------------------------------------- 246 (317)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTEEEEEEECC-----------------------------------------------
T ss_pred CCCCCEEEECCCCCEEEEEECCCCCEEEEEECC-----------------------------------------------
T ss_conf 258861475169978999888999688999688-----------------------------------------------
Q ss_pred CCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHH
Q ss_conf 6781583448999-189816999099973999999649718998899998406786058619999540588640124678
Q 000470 1351 LLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKA 1429 (1472)
Q Consensus 1351 ~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~ 1429 (1472)
...|.+++++|++ ++++|+.||.|++||+.+++....+.+
T Consensus 247 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------------------------- 287 (317)
T d1vyhc1 247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--------------------------------------- 287 (317)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC---------------------------------------
T ss_pred CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC---------------------------------------
T ss_conf 99879999879999999997989499999999919999928---------------------------------------
Q ss_pred HHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 8754201777887530458752206982899980894389839
Q 000470 1430 VLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1430 ~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|.+.|++++ |++++++|+||+.||+|+|||
T Consensus 288 ------------h~~~V~~~~-~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 288 ------------HEHFVTSLD-FHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp ------------CSSCEEEEE-ECSSSSCEEEEETTSEEEEEC
T ss_pred ------------CCCCEEEEE-ECCCCCEEEEEECCCEEEEEC
T ss_conf ------------999889999-949999999992899499829
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=311.26 Aligned_cols=192 Identities=20% Similarity=0.219 Sum_probs=166.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++..
T Consensus 63 l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~ 142 (263)
T d2j4za1 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 142 (263)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred CCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCC
T ss_conf 68888885999999899989998504798589887504899999999999999999999998894652202344146689
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++..... ......|++.|+|||++. +..|+.++||||+||++|||++|++|
T Consensus 143 ~~~kl~DFG~a~~~~~~---------~~~~~~Gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyell~G~~P 203 (263)
T d2j4za1 143 GELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIE----------GRMHDEKVDLWSLGVLCYEFLVGKPP 203 (263)
T ss_dssp SCEEECCCCSCSCCCCC---------CCEETTEEGGGCCHHHHT----------TCCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEECCCCEEEECCCC---------CCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 98711555633544888---------523557887634999975----------89989314404675999998329999
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9704799999368999964688998889999998300295889899999997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|..................++...++++++||.+||+.||++|||++|+|+|
T Consensus 204 f~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 204 FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp TCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8889999999999718999986689999999999764797689099999719
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-41 Score=282.03 Aligned_cols=292 Identities=16% Similarity=0.232 Sum_probs=236.8
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC
Q ss_conf 53634511234555589990799799999299979999399886442111105874169732799992499799999179
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1048 G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~D 1127 (1472)
.+.++.+ +|...|++++|+|++++++||+ ||+|+|||+......... .......|.+.|.+++|+|+++.|++|+.|
T Consensus 42 ~~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~-~~~~~~~h~~~I~~v~~s~dg~~l~s~~~d 118 (337)
T d1gxra_ 42 ARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV-SQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp EEEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS-EEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred CEEEEEC-CCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCCCCCEE-EEEEECCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 5499987-9999289999989999999997-998899773677633116-876404889968999986799889886123
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCC
Q ss_conf 94999980112468886433468545233027998589999713799872199999589749999599898654000478
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
|.|++|++.... .........+...+....|+++ +..+++++.++.|.+||+++++.......
T Consensus 119 g~i~iwd~~~~~------------~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~~~~~~~~~~~~~~-- 181 (337)
T d1gxra_ 119 STLSIWDLAAPT------------PRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQG-- 181 (337)
T ss_dssp SEEEEEECCCC--------------EEEEEEECSSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECC--
T ss_pred CCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 321111111111------------1111111111111111111111---11111111111111111111111111111--
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 76653899996999899999379939999789995100674156677204784259999744468999799998699499
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~ 1287 (1472)
|.+.+++++|++++..+++|+.||.+++||++.+..+..+.+ ..+|.++.+ +|... ++++++.++.+.
T Consensus 182 ~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~--~~~i~~l~~-~~~~~---------~l~~~~~d~~i~ 249 (337)
T d1gxra_ 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF--TSQIFSLGY-CPTGE---------WLAVGMESSNVE 249 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEE-CTTSS---------EEEEEETTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC--CCCEEEEEE-CCCCC---------CCCEECCCCCCC
T ss_conf 111111012344432112235665532111111000002466--661579997-15303---------000000256421
Q ss_pred EEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEE
Q ss_conf 9986887177898613588987668776323588988999753323445332223448999886781583448999-189
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~Li 1366 (1472)
+||+.+++..... .|...|.++.|+|++ .++
T Consensus 250 i~d~~~~~~~~~~------------------------------------------------~~~~~i~~v~~s~~g~~l~ 281 (337)
T d1gxra_ 250 VLHVNKPDKYQLH------------------------------------------------LHESCVLSLKFAYCGKWFV 281 (337)
T ss_dssp EEETTSSCEEEEC------------------------------------------------CCSSCEEEEEECTTSSEEE
T ss_pred CCCCCCCCCCCCC------------------------------------------------CCCCCCCEEEECCCCCEEE
T ss_conf 1111111100001------------------------------------------------2456541699989999999
Q ss_pred ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 81699909997399999964971899889999840678605861999954058864012467887542017778875304
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
+|+.|+.|++||+.+++..... .|.+.|
T Consensus 282 s~s~Dg~i~iwd~~~~~~~~~~----------------------------------------------------~~~~~v 309 (337)
T d1gxra_ 282 STGKDNLLNAWRTPYGASIFQS----------------------------------------------------KESSSV 309 (337)
T ss_dssp EEETTSEEEEEETTTCCEEEEE----------------------------------------------------ECSSCE
T ss_pred EEECCCEEEEEECCCCCEEEEC----------------------------------------------------CCCCCE
T ss_conf 9948996999989999799992----------------------------------------------------699987
Q ss_pred EEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 58752206982899980894389839
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++++ |++++++|++|+.||.|+||+
T Consensus 310 ~~~~-~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 310 LSCD-ISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEE-ECTTSCEEEEEETTSCEEEEE
T ss_pred EEEE-EECCCCEEEEEECCCEEEEEE
T ss_conf 9999-927999999990899699997
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-45 Score=304.74 Aligned_cols=194 Identities=16% Similarity=0.177 Sum_probs=166.5
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 62 l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~ 141 (337)
T d1o6la_ 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141 (337)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred CCCCCEEEEEEEECCCCCCCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC
T ss_conf 79998877876403564211100035798605555325677599999999999652113431596224647778476589
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
|.+||+|||+++....... ...+.+|++.|+|||.+. +..|+.++||||+||++|||++|++|
T Consensus 142 g~vkl~DFG~a~~~~~~~~-------~~~~~~GT~~Y~aPE~~~----------~~~y~~~~DiwSlGvilyeml~G~~p 204 (337)
T d1o6la_ 142 GHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLP 204 (337)
T ss_dssp SCEEECCCTTCBCSCCTTC-------CBCCCEECGGGCCGGGGS----------SSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEECCCCCCCCCCCC-------CCCCCEECHHHHHHHHCC----------CCCCCHHHCCCCHHHHHHHHHHCCCC
T ss_conf 9888820565200356786-------205510088996666504----------89888333102230678899878999
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHH
Q ss_conf 970479999936899996468899888999999830029588989-----9999997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~ 211 (1472)
|.........+........++...++++++||.+||++||++|++ ++|+++|
T Consensus 205 f~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 205 FYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp SCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCC
T ss_conf 999699999999852899898668999999998666389344225652349999729
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=310.73 Aligned_cols=196 Identities=18% Similarity=0.212 Sum_probs=166.0
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++..
T Consensus 65 l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~ 144 (288)
T d1uu3a_ 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 144 (288)
T ss_dssp CCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred CCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
T ss_conf 68888617999999899889999704898777765315999999999999999999976216508847677412366888
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.++|+|||+++....... .....+..|++.|+|||++. +..|+.++||||+||++|||++|.+|
T Consensus 145 ~~vkl~DFG~a~~~~~~~~-----~~~~~~~~GT~~Y~APE~~~----------~~~~~~~~DiwSlGvilyell~g~~P 209 (288)
T d1uu3a_ 145 MHIQITDFGTAKVLSPESK-----QARANSFVGTAQYVSPELLT----------EKSACKSSDLWALGCIIYQLVAGLPP 209 (288)
T ss_dssp SCEEECCCTTCEECC---------------CCCCGGGCCHHHHH----------TCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEECCCCCCEECCCCCC-----CCCCCCCCCCCCCCCCEEEC----------CCCCCCCCCEEHHHHHHHHHHHCCCC
T ss_conf 5388603210242256776-----43335556775525844002----------68989666230456999998038899
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9704799999368999964688998889999998300295889899999997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|..................++...++++++||.+||+.||++|+|++|++.+
T Consensus 210 f~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 210 FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp SCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf 8995999999999718999985479999999999855797689197897377
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=9.8e-45 Score=303.20 Aligned_cols=193 Identities=19% Similarity=0.183 Sum_probs=165.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC-
Q ss_conf 999883201289994895899930667-95988970999-999999999999999999999988984248889979991-
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT- 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~- 77 (1472)
|+||||++++++++++...|+|||||+ |+|.+++..++ .+++.+++.|+.||+.||.|||++||+||||||+|||++
T Consensus 83 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~ 162 (352)
T d1koba_ 83 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET 162 (352)
T ss_dssp CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred CCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
T ss_conf 79979891999999899999999828998088889863899899999999999999999999779265131445531134
Q ss_pred -CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf -5990999713664323688999999721220599986423752111237863224579999520478887999999827
Q 000470 78 -SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 -~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg 156 (1472)
..+.+||+|||+++..... ....+..+++.|+|||.+. +..|+.++||||+||++|||++|
T Consensus 163 ~~~~~vkL~DFGla~~~~~~--------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvilyelltG 224 (352)
T d1koba_ 163 KKASSVKIIDFGLATKLNPD--------EIVKVTTATAEFAAPEIVD----------REPVGFYTDMWAIGVLGYVLLSG 224 (352)
T ss_dssp TTCCCEEECCCTTCEECCTT--------SCEEEECSSGGGCCHHHHT----------TCCBCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEECCCCEECCCC--------CCEEECCCCCCCCCHHHHC----------CCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 67884899525630343788--------7201004764534899974----------79989763338989999999968
Q ss_pred CCCCCCHHH----HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999970479----9999368999964688998889999998300295889899999997
Q 000470 157 VPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
.+||..... ..+.++.+..........++++++||.+||+.||++|||++|+|+|
T Consensus 225 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 225 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp CCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 89989979999999998478898930024799999999999756996689189999609
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-44 Score=302.12 Aligned_cols=193 Identities=26% Similarity=0.313 Sum_probs=165.6
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC--
Q ss_conf 999883201289994895899930667-95988970999999999999999999999999988984248889979991--
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT-- 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~-- 77 (1472)
|+||||+++++++++++..|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||+.
T Consensus 64 l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~ 143 (307)
T d1a06a_ 64 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 143 (307)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS
T ss_pred CCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCC
T ss_conf 79989991989999899888988526898488865303678878999999999999875241305568704630011046
Q ss_pred -CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf -5990999713664323688999999721220599986423752111237863224579999520478887999999827
Q 000470 78 -SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 78 -~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg 156 (1472)
..+.+||+|||+++..... ....+..|++.|+|||.+. +..|++++||||+||++|||++|
T Consensus 144 ~~~~~vkl~DFG~a~~~~~~--------~~~~~~~GT~~y~APE~~~----------~~~~~~~~DiwSlGvilyell~g 205 (307)
T d1a06a_ 144 DEDSKIMISDFGLSKMEDPG--------SVLSTACGTPGYVAPEVLA----------QKPYSKAVDCWSIGVIAYILLCG 205 (307)
T ss_dssp STTCCEEECCC--------------------------CTTSCHHHHT----------TCCCCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCEEEECCCC--------CEEEEEEECCCCCCCHHHC----------CCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 88824998315435872589--------7044003284225918873----------79998078734515999999859
Q ss_pred CCCCCCHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9999704799----999368999964688998889999998300295889899999997
Q 000470 157 VPFFELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
.+||...... .+.++.+..........++++++||.+||++||++|||++|+|+|
T Consensus 206 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 206 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp SCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 79999989999999986168777876666789999999999760897579189998629
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.7e-44 Score=301.80 Aligned_cols=194 Identities=16% Similarity=0.194 Sum_probs=166.9
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||++ |+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++..
T Consensus 64 ~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~ 143 (364)
T d1omwa3 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 143 (364)
T ss_dssp SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS
T ss_pred CCCCCEEEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCC
T ss_conf 89985889999999899889999914898389998732553278999999999999999997796220444221678588
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++...... ..+..|++.|+|||.+. .+..|++++||||+||++|||++|++|
T Consensus 144 g~iKl~DFGla~~~~~~~---------~~~~~GT~~y~APE~~~---------~~~~~~~~~DiwSlGvilyemltG~~P 205 (364)
T d1omwa3 144 GHVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQ---------KGVAYDSSADWFSLGCMLFKLLRGHSP 205 (364)
T ss_dssp SCEEECCCTTCEECSSSC---------CCSCCSCGGGCCHHHHS---------TTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEEECEEEECCCCC---------CCCCCCCCCCCHHHHHH---------CCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 967982201023337886---------43311345542168760---------389998441046778999999859998
Q ss_pred CCCH---HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHHH
Q ss_conf 9704---79999936899996468899888999999830029588989-----99999972
Q 000470 160 FELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNY 212 (1472)
Q Consensus 160 f~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~~ 212 (1472)
|... ......+........++...++++++||.+||++||++|++ |+|+++|.
T Consensus 206 f~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp 266 (364)
T d1omwa3 206 FRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266 (364)
T ss_dssp SCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSG
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCC
T ss_conf 8889989999999860468887887789999999999856698880887435799997491
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=307.19 Aligned_cols=196 Identities=19% Similarity=0.217 Sum_probs=160.9
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
|+||||+++++++++++..|+||||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++..
T Consensus 60 l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~ 139 (271)
T d1nvra_ 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 139 (271)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC
T ss_conf 79988846965404674367988645898089997537999999999999999999999997598357546899788789
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++....... .....+..||+.|+|||.+... ..++.++||||+||++|||++|++|
T Consensus 140 ~~~KL~DFG~a~~~~~~~~-----~~~~~~~~GT~~Y~APE~~~~~---------~~~~~~~DiwSlGvilyeml~G~~p 205 (271)
T d1nvra_ 140 DNLKISDFGLATVFRYNNR-----ERLLNKMCGTLPYVAPELLKRR---------EFHAEPVDVWSCGIVLTAMLAGELP 205 (271)
T ss_dssp CCEEECCCTTCEECEETTE-----ECCBCCCCSCGGGSCTHHHHCS---------SBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEECCCHHHEEECCCCC-----CCCCCCEEECCCCCCHHHHCCC---------CCCCCCEEEEHHHHHHHHHHHCCCC
T ss_conf 9879832314224046886-----5311132557474287286189---------9999710161737999999829978
Q ss_pred CCCHH--HHHH--HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 97047--9999--9368999964688998889999998300295889899999997
Q 000470 160 FELSH--LLAY--RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~--~~~~--~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|.... ...+ ....... .......++++++||.+||+.||++|||++|+|+|
T Consensus 206 f~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 206 WDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp CSSSSTTSHHHHHHHTTCTT-STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCCC-CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 88898599999998638887-88644699999999999767996689099999619
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=302.80 Aligned_cols=192 Identities=19% Similarity=0.187 Sum_probs=161.3
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++..+ .+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 74 l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~ 152 (293)
T d1yhwa1 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152 (293)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred CCCCCEEEEEEEEEECCEEEEEEEECCCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC
T ss_conf 79998805857798899989999703798089886415-99999999999999999999998797226776888688789
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++....... ......|++.|+|||.+. +..|+.++||||+||++|||++|.+|
T Consensus 153 ~~vkl~DFG~a~~~~~~~~-------~~~~~~gt~~Y~aPE~~~----------~~~~~~~~DiwSlGvilyemltG~~P 215 (293)
T d1yhwa1 153 GSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPP 215 (293)
T ss_dssp CCEEECCCTTCEECCSTTC-------CBCCCCSCGGGCCHHHHS----------SSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEECCCHHHEEECCCCC-------CCCCCCCCCCCCCHHHHC----------CCCCCCHHCEEHHHHHHHHHHHCCCC
T ss_conf 9686425156413213666-------444444477736826644----------79988012031372999998048899
Q ss_pred CCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 97047999----99368999964688998889999998300295889899999997
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|....... ..... .+....+...++.+++||.+||+.||++|||++|+|+|
T Consensus 216 f~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 216 YLNENPLRALYLIATNG-TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp TTTSCHHHHHHHHHHHC-SCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 89979999999998579-99888855379999999999866996689099999649
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-45 Score=303.20 Aligned_cols=192 Identities=16% Similarity=0.108 Sum_probs=158.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998-89842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~-~gIvH~DIKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||++ |+|.+++.+++.+++.+++.++.|++.||.|||+ +||+||||||+|||++.
T Consensus 61 l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~ 140 (322)
T d1s9ja_ 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140 (322)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT
T ss_pred CCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECC
T ss_conf 79999994999999899999999767998689987424999999999999999999999998599971445779946878
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982799
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~ 158 (1472)
.+.+||+|||+++..... ...+..|++.|+|||++. +..|+.++||||+||++|||++|++
T Consensus 141 ~~~vkl~DFGla~~~~~~---------~~~~~~GT~~Y~APEvl~----------~~~y~~~~DiWSlGvil~ell~G~~ 201 (322)
T d1s9ja_ 141 RGEIKLCDFGVSGQLIDS---------MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAVGRY 201 (322)
T ss_dssp TCCEEECCCCCCHHHHHH---------TC---CCSSCCCCHHHHH----------CSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCCCCCCCC---------CCCCCCCCCCCCCCHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 998999548776256788---------621113771411946875----------8998948889989999999998889
Q ss_pred CCCCHHHHHH--H-----------------------------------------HCCCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf 9970479999--9-----------------------------------------3689999646-889988899999983
Q 000470 159 FFELSHLLAY--R-----------------------------------------RGQYDPSQHL-EKIPDSGIRKMILHM 194 (1472)
Q Consensus 159 ~f~~~~~~~~--~-----------------------------------------~~~~~~~~~l-~~~~~~~l~~lI~~m 194 (1472)
||........ . .......+.+ ....+.++++||.+|
T Consensus 202 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 281 (322)
T d1s9ja_ 202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC 281 (322)
T ss_dssp CSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98998878999999887517754577421233322111122235413477887665026876676444899999999998
Q ss_pred CCCCCCCCCCHHHHHHH
Q ss_conf 00295889899999997
Q 000470 195 IQLEPELRFSAESYLQN 211 (1472)
Q Consensus 195 L~~dP~~R~sa~e~L~~ 211 (1472)
|+.||++||||+|+|+|
T Consensus 282 L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 282 LIKNPAERADLKQLMVH 298 (322)
T ss_dssp TCSSTTTSCCHHHHHTS
T ss_pred CCCCHHHCCCHHHHHHC
T ss_conf 68994679089999609
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=7.3e-44 Score=297.74 Aligned_cols=193 Identities=17% Similarity=0.144 Sum_probs=163.6
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
|+||||++++++++++...|+||||++ |+|.+++.. .+.+++.+++.|+.||+.||.|||++||+||||||+|||++.
T Consensus 80 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~ 159 (350)
T d1koaa2 80 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 159 (350)
T ss_dssp TCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred CCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECC
T ss_conf 79979992999999899999999857998899999762378999999999999999999997569760001546736416
Q ss_pred --CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf --990999713664323688999999721220599986423752111237863224579999520478887999999827
Q 000470 79 --WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 79 --~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg 156 (1472)
.+.+||+|||+++...... ...+..|++.|+|||++. +..|+.++||||+||++|||++|
T Consensus 160 ~~~~~vkL~DFG~a~~~~~~~--------~~~~~~gT~~Y~aPEv~~----------~~~~~~~~DiwSlGvilyell~G 221 (350)
T d1koaa2 160 KRSNELKLIDFGLTAHLDPKQ--------SVKVTTGTAEFAAPEVAE----------GKPVGYYTDMWSVGVLSYILLSG 221 (350)
T ss_dssp TTSCCEEECCCTTCEECCTTS--------CEEEECSCTTTCCHHHHH----------TCCBCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEECCHHEECCCCC--------CCCEECCCCCCCCHHHHC----------CCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 889869995452104425654--------320006862421889975----------89987267655465999999859
Q ss_pred CCCCCCHHH----HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999970479----9999368999964688998889999998300295889899999997
Q 000470 157 VPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
++||..... ..+..+.+..........++++++||.+||+.||++|||++|+|+|
T Consensus 222 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 222 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 89989979999999998478898942235899999999999756896679089998629
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.8e-44 Score=298.92 Aligned_cols=191 Identities=16% Similarity=0.161 Sum_probs=159.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
|+||||+++++++.++...|+|||||. |+|..++..+..+++.+++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 72 l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~ 151 (309)
T d1u5ra_ 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151 (309)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT
T ss_pred CCCCCEEEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCC
T ss_conf 78999823899999899889999806999457899737999999999999999999999986897666788421798799
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++.... ..+..|++.|+|||++.+. ....|+.++||||+||++|||++|.+|
T Consensus 152 ~~~Kl~DFG~a~~~~~-----------~~~~~GT~~Y~APE~~~~~-------~~~~y~~~~DiwSlGvilyel~~g~~P 213 (309)
T d1u5ra_ 152 GLVKLGDFGSASIMAP-----------ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPP 213 (309)
T ss_dssp TEEEECCCTTCBSSSS-----------BCCCCSCGGGCCHHHHTTT-------TSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEECCCCCCCCC-----------CCCCCCCCCCCCHHHHHCC-------CCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 9789844365334677-----------8731347663688998346-------788867214545589999999878899
Q ss_pred CCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 97047999----99368999964688998889999998300295889899999997
Q 000470 160 FELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|....... ...+... ...+...++.+++||.+||+.||++|||++|+|+|
T Consensus 214 f~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 214 LFNMNAMSALYHIAQNESP--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp TTTSCHHHHHHHHHHSCCC--CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf 9997999999999828999--88878889999999999773796579189999719
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-44 Score=297.78 Aligned_cols=198 Identities=17% Similarity=0.148 Sum_probs=163.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
|+||||+++++++++++..|+||||++ |+|.+++.. ...+++.+++.++.||+.||.|||++||+||||||+|||++.
T Consensus 66 l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~ 145 (288)
T d2jfla1 66 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 145 (288)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred CCCCCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECC
T ss_conf 79999884988980099589999627998188999862899999999999999999999999889887140700314878
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982799
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~ 158 (1472)
++.+||+|||+++..... .....+..|++.|+|||++.... .....|+.++||||+||++|||++|.+
T Consensus 146 ~~~~Kl~DFG~a~~~~~~-------~~~~~~~~Gt~~y~APE~l~~~~-----~~~~~y~~k~DiwSlGvilyemltg~~ 213 (288)
T d2jfla1 146 DGDIKLADFGVSAKNTRT-------IQRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAEIEP 213 (288)
T ss_dssp TSCEEECCCTTCEECHHH-------HHHHTCCCSCCTTCCHHHHTTCS-----TTTSSTTTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECHHHHCCCCC-------CCCCCCCCCCCCCCCHHHHHHCC-----CCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999899716123035778-------64100102562647999983202-----578888806657878999999820889
Q ss_pred CCCCHH----HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 997047----99999368999964688998889999998300295889899999997
Q 000470 159 FFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 ~f~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
||.... .....++... ....+...++++++||.+||+.||++|||++|+|+|
T Consensus 214 Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 214 PHHELNPMRVLLKIAKSEPP-TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp TTTTSCGGGHHHHHHHSCCC-CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 99998999999999707998-777656699999999999766996689199999629
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.3e-44 Score=297.75 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=164.0
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++++++.+...|+|+||+. |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++..
T Consensus 98 l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~ 177 (350)
T d1rdqe_ 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177 (350)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCC
T ss_conf 48772740344443222223222233466226667515898999999999999998999985998617679999360778
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||+++..... ..+..|++.|+|||++. +..|+.++||||+||++|||++|.+|
T Consensus 178 g~ikL~DFG~a~~~~~~----------~~~~~Gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyemltG~~P 237 (350)
T d1rdqe_ 178 GYIQVTDFGFAKRVKGR----------TWTLCGTPEALAPEIIL----------SKGYNKAVDWWALGVLIYEMAAGYPP 237 (350)
T ss_dssp SCEEECCCTTCEECSSC----------BCCCEECGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEECEEEEECCCC----------CCCCCCCCCCCCHHHHC----------CCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 97886101033322566----------64336763567889971----------79988533114500789999758899
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 97047999993689999646889988899999983002958898-----99999997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 211 (1472)
|...................+...++++++||.+||+.||.+|+ +++++++|
T Consensus 238 f~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp SCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCC
T ss_conf 899599999999861798897668999999999983409986065534549999719
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-43 Score=296.75 Aligned_cols=191 Identities=18% Similarity=0.188 Sum_probs=164.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++++++++...|+||||+. |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 61 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~ 140 (316)
T d1fota_ 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN 140 (316)
T ss_dssp CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT
T ss_pred CCCCCHHHEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCC
T ss_conf 36967533035685288005676503786322343222211100799999999876554124767705568105038689
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
|.+||+|||+++..... ..+.+|++.|+|||++. +..|+.++||||+||++|||++|++|
T Consensus 141 g~vkL~DFG~a~~~~~~----------~~~~~Gt~~Y~APE~l~----------~~~y~~~~DiwSlGvilyemltG~~P 200 (316)
T d1fota_ 141 GHIKITDFGFAKYVPDV----------TYTLCGTPDYIAPEVVS----------TKPYNKSIDWWSFGILIYEMLAGYTP 200 (316)
T ss_dssp SCEEECCCSSCEECSSC----------BCCCCSCTTTCCHHHHT----------TCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEECCCCCEEECCC----------CCCCCCCCCCCCHHHHC----------CCCCCCHHHCCCCCHHHHHHHHCCCC
T ss_conf 98898317521671245----------64345763435999983----------89998043046533368999759899
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 97047999993689999646889988899999983002958898-----99999997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 211 (1472)
|..................++...+++++++|.+||++||.+|+ +++++++|
T Consensus 201 f~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 201 FYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp TCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCC
T ss_conf 999699999999970898899778999999999995449976664310219999819
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-44 Score=298.68 Aligned_cols=194 Identities=17% Similarity=0.231 Sum_probs=164.9
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++++++..|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++..
T Consensus 60 ~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~ 139 (320)
T d1xjda_ 60 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 139 (320)
T ss_dssp TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCC
T ss_conf 79996878988970498316777503798089986404789999999999999999999986893403476540444489
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||.++....... ......|++.|+|||.+. +..|+.++||||+||++|||++|++|
T Consensus 140 ~~~kl~DFG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvilyemltG~~P 202 (320)
T d1xjda_ 140 GHIKIADFGMCKENMLGDA-------KTNTFCGTPDYIAPEILL----------GQKYNHSVDWWSFGVLLYEMLIGQSP 202 (320)
T ss_dssp SCEEECCCTTCBCCCCTTC-------CBCCCCSCGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEECCCCCHHHHCCCCCC-------CCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 9630155530232356653-------345457877768999982----------79988323201122789898738899
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH-HHHHH
Q ss_conf 97047999993689999646889988899999983002958898999-99997
Q 000470 160 FELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE-SYLQN 211 (1472)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~-e~L~~ 211 (1472)
|................+.+++..++++++||.+||++||++||++. ++++|
T Consensus 203 F~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 203 FHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp SCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHC
T ss_conf 99989999999997189989756799999999996544898783889999809
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-43 Score=290.86 Aligned_cols=191 Identities=18% Similarity=0.244 Sum_probs=158.4
Q ss_pred CCCCCCCEEEEEEEE----CCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCC
Q ss_conf 999883201289994----895899930667-959889709999999999999999999999999889--8424888997
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCEN 73 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~----~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~g--IvH~DIKpeN 73 (1472)
|+||||+++++++++ +...|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||++| |+||||||+|
T Consensus 65 l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~N 144 (270)
T d1t4ha_ 65 LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN 144 (270)
T ss_dssp CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG
T ss_pred CCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
T ss_conf 79998506999984033458889999957898948999751355469999999999999999999789979968767435
Q ss_pred EEECC-CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99915-99099971366432368899999972122059998642375211123786322457999952047888799999
Q 000470 74 VLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 152 (1472)
Q Consensus 74 ILv~~-~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~e 152 (1472)
||++. .+.+||+|||+++.... . ...+..|++.|+|||.+. +.|+.++||||+||++||
T Consensus 145 ILl~~~~~~~Kl~DFGla~~~~~------~---~~~~~~GT~~Y~aPE~~~-----------~~~~~~~DIwSlGvilye 204 (270)
T d1t4ha_ 145 IFITGPTGSVKIGDLGLATLKRA------S---FAKAVIGTPEFMAPEMYE-----------EKYDESVDVYAFGMCMLE 204 (270)
T ss_dssp EEESSTTSCEEECCTTGGGGCCT------T---SBEESCSSCCCCCGGGGG-----------TCCCTHHHHHHHHHHHHH
T ss_pred CEEECCCCCEEEEECCCCEECCC------C---CCCCCCCCCCCCCHHHHC-----------CCCCCCCCHHHHHHHHHH
T ss_conf 11667999889800576542368------7---667755381300898847-----------899986711007999999
Q ss_pred HHHCCCCCCCH-HHHHH-HHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 98279999704-79999-936899-9964688998889999998300295889899999997
Q 000470 153 LFLEVPFFELS-HLLAY-RRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 153 l~tg~~~f~~~-~~~~~-~~~~~~-~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|++|++||... ..... +..... ....++...++++++||.+||+.||++|||++|+|+|
T Consensus 205 l~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 205 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 98788999876559999999973899865675578999999999763797589299999677
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-43 Score=292.11 Aligned_cols=195 Identities=16% Similarity=0.171 Sum_probs=163.2
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCC-----------------------CCCCHHHHHHHHHHHHHHHH
Q ss_conf 99883201289994895899930667-9598897099-----------------------99999999999999999999
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-----------------------PFLSLVEKKWLAFQLLLAVK 57 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~-----------------------~~l~~~~~~~i~~Qil~aL~ 57 (1472)
+||||++++++++++...|+||||++ |+|.++|..+ +.+++.+++.|+.|++.||+
T Consensus 99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ 178 (325)
T d1rjba_ 99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME 178 (325)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 89968687788862995899997279995999998625777510221000012220012577899999999999999999
Q ss_pred HHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99988984248889979991599099971366432368899999972122059998642375211123786322457999
Q 000470 58 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL 137 (1472)
Q Consensus 58 ~lH~~gIvH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~ 137 (1472)
|||++||+||||||+|||++..+.+||+|||+++....... .....+..+++.|+|||.+. ...|
T Consensus 179 yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~l~----------~~~~ 243 (325)
T d1rjba_ 179 FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLF----------EGIY 243 (325)
T ss_dssp HHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-----SEEETTEEECGGGCCHHHHH----------HCCC
T ss_pred HHHHCCEEECCCCHHCCCCCCCCEEEEEECCCCCCCCCCCC-----EEEECCCCCCCCCCCHHHHC----------CCCC
T ss_conf 99739905052703214434598289851422220457786-----15623435787657838872----------7999
Q ss_pred CCCCHHHHHHHHHHHHHH-CCCCCCCH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 952047888799999982-79999704----7999993689999646889988899999983002958898999999972
Q 000470 138 KPSMDIFAVGCVIAELFL-EVPFFELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 138 t~~~DIwSlG~vl~el~t-g~~~f~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 212 (1472)
+.++||||+||++|||++ |.+||... ......+..+.+ ..+...++++++||.+||+.||++|||++|+++++
T Consensus 244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 321 (325)
T d1rjba_ 244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM--DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321 (325)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf 9633030003999999838999999989899999998569989--98876789999999997588966893999999997
Q ss_pred H
Q ss_conf 1
Q 000470 213 A 213 (1472)
Q Consensus 213 ~ 213 (1472)
.
T Consensus 322 ~ 322 (325)
T d1rjba_ 322 G 322 (325)
T ss_dssp H
T ss_pred H
T ss_conf 4
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-43 Score=291.68 Aligned_cols=193 Identities=19% Similarity=0.168 Sum_probs=165.0
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
|+||||++++++++++...|+||||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++..
T Consensus 70 l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~ 149 (293)
T d1jksa_ 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149 (293)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS
T ss_pred CCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECC
T ss_conf 79989993889999799899999867786431001035642155789999999999876662542211333012798258
Q ss_pred C----CEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9----099971366432368899999972122059998642375211123786322457999952047888799999982
Q 000470 80 N----WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 80 ~----~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t 155 (1472)
+ .+||+|||+++...... ...+..+++.|+|||.+. ...++.++||||+||++|||++
T Consensus 150 ~~~~~~vkl~DfG~a~~~~~~~--------~~~~~~~t~~y~APE~~~----------~~~~~~~~DiwSlGvilyell~ 211 (293)
T d1jksa_ 150 NVPKPRIKIIDFGLAHKIDFGN--------EFKNIFGTPEFVAPEIVN----------YEPLGLEADMWSIGVITYILLS 211 (293)
T ss_dssp SSSSCCEEECCCTTCEECTTSC--------BCSCCCCCGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEECCHHHHHHCCCCC--------CCCCCCCCCCCCCHHHHC----------CCCCCCCCCCHHHHHHHHHHHC
T ss_conf 9866646964334421057776--------312247777430999981----------8999976652214099999970
Q ss_pred CCCCCCCHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 79999704799----999368999964688998889999998300295889899999997
Q 000470 156 EVPFFELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~~f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|.+||...... .+..+.+......+...++.+++||.+||+.||++|||++|+|+|
T Consensus 212 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 212 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp SSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 889988999999999998168888701047889999999999863896689199999619
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.1e-38 Score=261.14 Aligned_cols=295 Identities=20% Similarity=0.309 Sum_probs=236.4
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC
Q ss_conf 53634511234555589990799799999299979999399886442111105874169732799992499799999179
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1127 (1472)
Q Consensus 1048 G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~D 1127 (1472)
-+..++|+||+++|++++|+|++.+|+|||.||+|+|||..+++ ...++..|...|.+++|+|++..+++|+.|
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d 118 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN------KVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE------EEEEEECSCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCE------EEEEEECCCCCEEEEEEECCCEEEEEECCC
T ss_conf 06527988878988899998999999999789955563102102------579972465337756760121144310133
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCC
Q ss_conf 94999980112468886433468545233027998589999713799872199999589749999599898654000478
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1207 (1472)
Q Consensus 1128 G~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~ 1207 (1472)
+.+.+|+...... ......... .+........... +..+.....++....++............
T Consensus 119 ~~i~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 182 (340)
T d1tbga_ 119 NICSIYNLKTREG---------NVRVSRELA-GHTGYLSCCRFLD----DNQIVTSSGDTTCALWDIETGQQTTTFTG-- 182 (340)
T ss_dssp CCEEEEESSSSCS---------CCCEEEEEC-CCSSCEEEEEEEE----TTEEEEEETTTEEEEEETTTTEEEEEEEC--
T ss_pred CEEECCCCCCCCC---------CCCCCEECC-CCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 2010133222212---------221110013-5421101111111----11111112445432001232211111233--
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 76653899996999899999379939999789995100674156677204784259999744468999799998699499
Q 000470 1208 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1287 (1472)
Q Consensus 1208 h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~ 1287 (1472)
+...+....+.+.+..+++|+.||.+++||++.+.++..+.. +..+|+++++ +|++. ++++++.++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-h~~~i~~v~~-~p~~~---------~l~s~s~d~~i~ 251 (340)
T d1tbga_ 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF-FPNGN---------AFATGSDDATCR 251 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECC-CSSCEEEEEE-CTTSS---------EEEEEETTSCEE
T ss_pred CCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEC-CCCCEEEEEE-CCCCC---------EEEEEECCCEEE
T ss_conf 101576300124421268760573699999999948899957-8898589999-79989---------999996999699
Q ss_pred EEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEE
Q ss_conf 9986887177898613588987668776323588988999753323445332223448999886781583448999-189
Q 000470 1288 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1366 (1472)
Q Consensus 1288 VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~Li 1366 (1472)
+||+........+... .+..++.++.|++++ .++
T Consensus 252 ~~~~~~~~~~~~~~~~---------------------------------------------~~~~~i~~~~~s~~~~~l~ 286 (340)
T d1tbga_ 252 LFDLRADQELMTYSHD---------------------------------------------NIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp EEETTTTEEEEEECCT---------------------------------------------TCCSCEEEEEECSSSCEEE
T ss_pred EEEECCCCCCCCCCCC---------------------------------------------CCCCCEEEEEECCCCCEEE
T ss_conf 9752122111111122---------------------------------------------4457458999989999999
Q ss_pred ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 81699909997399999964971899889999840678605861999954058864012467887542017778875304
Q 000470 1367 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1446 (1472)
Q Consensus 1367 Tgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1446 (1472)
+|+.||.|++||+.+++....+. +|.+.|
T Consensus 287 ~g~~dg~i~iwd~~~~~~~~~~~---------------------------------------------------~H~~~V 315 (340)
T d1tbga_ 287 AGYDDFNCNVWDALKADRAGVLA---------------------------------------------------GHDNRV 315 (340)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC---------------------------------------------------CCSSCE
T ss_pred EEECCCEEEEEECCCCCEEEEEC---------------------------------------------------CCCCCE
T ss_conf 99797989999999993989984---------------------------------------------------899978
Q ss_pred EEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 58752206982899980894389839
Q 000470 1447 LSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1447 ~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++++ |++++.+|+|||.||.|+||+
T Consensus 316 ~~l~-~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 316 SCLG-VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEE-ECTTSSCEEEEETTSCEEEEC
T ss_pred EEEE-EECCCCEEEEECCCCEEEEEC
T ss_conf 9999-908999999990699799859
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-43 Score=291.44 Aligned_cols=193 Identities=20% Similarity=0.204 Sum_probs=156.9
Q ss_pred CCCCCCCEEEEEEEE----CCEEEEEECCCC-CCHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf 999883201289994----895899930667-95988970999--99999999999999999999998898424888997
Q 000470 1 MSSTPCVHKKFWQET----DKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~----~~~~ylV~e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeN 73 (1472)
++||||+++++++++ +...|+|||||+ |+|++++..++ .+++.+++.|+.||+.||+|||++||+||||||+|
T Consensus 62 ~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~N 141 (335)
T d2ozaa1 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 141 (335)
T ss_dssp TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred CCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 69999782989995034689789999977899849999986278775799999999999999999997698644410022
Q ss_pred EEECC---CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99915---990999713664323688999999721220599986423752111237863224579999520478887999
Q 000470 74 VLVTS---WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 150 (1472)
Q Consensus 74 ILv~~---~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl 150 (1472)
||++. .+.+||+|||+++...... ...+..|++.|+|||.+. +..|+.++||||+||++
T Consensus 142 Ill~~~~~~~~~Kl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~----------~~~y~~~~DiwSlGvil 203 (335)
T d2ozaa1 142 LLYTSKRPNAILKLTDFGFAKETTSHN--------SLTTPCYTPYYVAPEVLG----------PEKYDKSCDMWSLGVIM 203 (335)
T ss_dssp EEESCSSTTCCEEECCCTTCEECCCCC--------CCCCCSCCCSSCCCCCCC----------GGGGSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCC--------CCCCCCCCCCCCCCHHHC----------CCCCCHHHHHHHHCHHH
T ss_conf 011355556631135455123336888--------643226775637927774----------89888888887645167
Q ss_pred HHHHHCCCCCCCHHH----HHHHHCCCCCCCCCC----CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999827999970479----999936899996468----8998889999998300295889899999997
Q 000470 151 AELFLEVPFFELSHL----LAYRRGQYDPSQHLE----KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 151 ~el~tg~~~f~~~~~----~~~~~~~~~~~~~l~----~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|+|++|.+||..... .............++ ...++++++||.+||+.||++|||+.|+|+|
T Consensus 204 y~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 204 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp HHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 788658899889887788999999985388888985434699999999999756996579099999709
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.6e-43 Score=290.75 Aligned_cols=198 Identities=20% Similarity=0.201 Sum_probs=167.3
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 99883201289994895899930667-95988970999999999999999999999999988984248889979991599
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~~ 80 (1472)
.||||+++++++++++..|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 68 ~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~ 147 (277)
T d1phka_ 68 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM 147 (277)
T ss_dssp TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred CCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
T ss_conf 79974799762146760599997689866899998659999999999999999999999875994323462548986899
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 09997136643236889999997212205999864237521112378632245799995204788879999998279999
Q 000470 81 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 160 (1472)
Q Consensus 81 ~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~f 160 (1472)
.+||+|||.++...... ......|+..|+|||.+.+... .....++.++||||+||++|||++|++||
T Consensus 148 ~~kl~DFG~a~~~~~~~--------~~~~~~gt~~y~~PE~~~~~~~----~~~~~~~~~~DiwslGvilyeml~g~~Pf 215 (277)
T d1phka_ 148 NIKLTDFGFSCQLDPGE--------KLREVCGTPSYLAPEIIECSMN----DNHPGYGKEVDMWSTGVIMYTLLAGSPPF 215 (277)
T ss_dssp CEEECCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHHHC----TTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEECCCHHEEECCCCC--------CEEEEECCCCCCCHHHHHCCCC----CCCCCCCCHHEECCCCHHHHHHCCCCCCC
T ss_conf 83871240316726887--------2134524678889888605344----56788992331856560231032288898
Q ss_pred CCHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 704799----999368999964688998889999998300295889899999997
Q 000470 161 ELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 161 ~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
...... .+..+.+.+........++++++||.+||+.||++||+++|+|+|
T Consensus 216 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 216 WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8999999999998189888985434689999999999765896689199999739
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-39 Score=269.12 Aligned_cols=303 Identities=17% Similarity=0.235 Sum_probs=228.5
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCC------------CCEEEECCCCCEEEEEEECCCCE
Q ss_conf 511234555589990799799999299979999399886442111------------10587416973279999249979
Q 000470 1053 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFR------------SRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1053 ~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~------------s~~t~~~~~~~I~~i~f~~~~~~ 1120 (1472)
+..+|+++|++++|+|||++||||+ ||+|+|||+.+++...... .......|...|++++|+++++.
T Consensus 57 ~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 135 (388)
T d1erja_ 57 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 135 (388)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred EECCCCCCEEEEEECCCCCEEEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 6079999689999999999999994-994899981364057663166544324432111014677898899998899980
Q ss_pred EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 99991799499998011246888643346854523302799858999971379987219999958974999959989865
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1121 las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~ 1200 (1472)
|++|+.||.|++|+.... ........+...+..+.++++ +..+++++.++.|++||.++....
T Consensus 136 l~s~~~dg~v~i~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~~~~~i~~~d~~~~~~~ 198 (388)
T d1erja_ 136 LATGAEDRLIRIWDIENR--------------KIVMILQGHEQDIYSLDYFPS---GDKLVSGSGDRTVRIWDLRTGQCS 198 (388)
T ss_dssp EEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEE
T ss_pred CEECCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCEEEEEEECCCCCCC
T ss_conf 121344411112111111--------------111111111111111011111---111112221015654101111110
Q ss_pred CEEECCCCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCCCCEEEC------CCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 4000478766538999969-998999993799399997899951006741------566772047842599997444689
Q 000470 1201 WTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQY------SQVCPIEKMCLFVPPPNAAVSTTA 1273 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsi~~sp-~g~~LvsGssdG~I~lWDlR~~~~i~s~~~------~~~~~I~~l~~~~p~~~~~~~s~~ 1273 (1472)
..... .....++.+.+ ++.+|++|+.||.+.+||.+.+..+..+.. .+..+|..+.+ +|++.
T Consensus 199 ~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~~~~------- 267 (388)
T d1erja_ 199 LTLSI---EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQ------- 267 (388)
T ss_dssp EEEEC---SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE-CTTSS-------
T ss_pred CCCCC---CCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEE-CCCCC-------
T ss_conf 00012---45442112368878758997389819996345573000102443334577898789999-79999-------
Q ss_pred CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99799998699499998688717789861358898766877632358898899975332344533222344899988678
Q 000470 1274 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1353 (1472)
Q Consensus 1274 ~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1353 (1472)
++++++.++.|.+||+.++............. .......|...
T Consensus 268 --~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~ 310 (388)
T d1erja_ 268 --SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT-----------------------------------CEVTYIGHKDF 310 (388)
T ss_dssp --EEEEEETTSEEEEEEC---------------C-----------------------------------EEEEEECCSSC
T ss_pred --EEEEEECCCCEEEEECCCCCCCCCCCCCCCCC-----------------------------------EEEECCCCCCE
T ss_conf --99999789928987515776432101344420-----------------------------------01101245532
Q ss_pred CEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 1583448999-189816999099973999999649718998899998406786058619999540588640124678875
Q 000470 1354 IRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLA 1432 (1472)
Q Consensus 1354 V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 1432 (1472)
|.+++|++++ ++++|+.||.|++||+.+++....+.+
T Consensus 311 v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~------------------------------------------ 348 (388)
T d1erja_ 311 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG------------------------------------------ 348 (388)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC------------------------------------------
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC------------------------------------------
T ss_conf 78999889999999996989799999999969999968------------------------------------------
Q ss_pred HHHCCCCCCCCCCEEEEEE-----EECCCCEEEEECCCCEEEECC
Q ss_conf 4201777887530458752-----206982899980894389839
Q 000470 1433 AAATDSAGCHRDSILSLGS-----VKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1433 ~~~~~~~~~H~d~I~~ia~-----~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|.+.|++++. |++++.+|+||+.||.|+||+
T Consensus 349 ---------H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~ 384 (388)
T d1erja_ 349 ---------HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384 (388)
T ss_dssp ---------CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred ---------CCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf ---------899789999846742589999999991899799976
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-42 Score=289.14 Aligned_cols=193 Identities=17% Similarity=0.136 Sum_probs=162.7
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-95988970999-9999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||++++++++++...|+|||||. |+|.+++..++ .+++.+++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 58 l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~ 137 (321)
T d1tkia_ 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137 (321)
T ss_dssp SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred CCCCCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
T ss_conf 79979890989998899889999538998088998753899999999999999999999998769975135544434437
Q ss_pred C--CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 9--90999713664323688999999721220599986423752111237863224579999520478887999999827
Q 000470 79 W--NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 79 ~--~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg 156 (1472)
. +.++|+|||.++..... ....+..+++.|+|||.+. +..|+.++||||+||++|+|++|
T Consensus 138 ~~~~~ikl~DFG~~~~~~~~--------~~~~~~~~t~~y~ape~~~----------~~~~~~~~DiWSlGvily~ll~G 199 (321)
T d1tkia_ 138 RRSSTIKIIEFGQARQLKPG--------DNFRLLFTAPEYYAPEVHQ----------HDVVSTATDMWSLGTLVYVLLSG 199 (321)
T ss_dssp SSCCCEEECCCTTCEECCTT--------CEEEEEESCGGGSCHHHHT----------TCEECHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHCCCCC--------CCCCCCCCCCCCCCCHHCC----------CCCCCCHHHCCCHHHHHHHHHHC
T ss_conf 88518997644111003467--------7532122332223402104----------87778401130279999999828
Q ss_pred CCCCCCHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9999704799----999368999964688998889999998300295889899999997
Q 000470 157 VPFFELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
.+||...... .+.++.+..........++++++||.+||+.||++|||++|+|+|
T Consensus 200 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 200 INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp SCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 99999989999999998389998802236789999999999866996689099999639
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-43 Score=294.67 Aligned_cols=192 Identities=22% Similarity=0.299 Sum_probs=160.6
Q ss_pred CCCCCCCEEEEEEEE--CCEEEEEECCCC-CCHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECC
Q ss_conf 999883201289994--895899930667-959889709----999999999999999999999999889-----84248
Q 000470 1 MSSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG-----ICHGD 68 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~--~~~~ylV~e~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qil~aL~~lH~~g-----IvH~D 68 (1472)
++||||+++++++.+ +..+|+||||++ |+|.+++.. +..+++.+++.++.|++.||+|||++| |+|||
T Consensus 60 l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrD 139 (269)
T d2java1 60 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 139 (269)
T ss_dssp CCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf 78999824899999178998999995689993899998515457899999999999999999999997167788788586
Q ss_pred CCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88997999159909997136643236889999997212205999864237521112378632245799995204788879
Q 000470 69 IKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 69 IKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|||+|||++.++.+||+|||+++...... ....+..|++.|+|||.+. ...|+.++||||+||
T Consensus 140 iKp~NIll~~~~~vkl~DFG~a~~~~~~~-------~~~~~~~gt~~Y~APE~l~----------~~~~~~~~DIwSlGv 202 (269)
T d2java1 140 LKPANVFLDGKQNVKLGDFGLARILNHDT-------SFAKAFVGTPYYMSPEQMN----------RMSYNEKSDIWSLGC 202 (269)
T ss_dssp CCGGGEEECTTSCEEECCHHHHHHC------------------CCCSCCCHHHHT----------TCCCCHHHHHHHHHH
T ss_pred CCHHHCCCCCCCCEEEEECCCEEECCCCC-------CCCCCCCCCCCCCCHHHHC----------CCCCCHHHHHHHHCH
T ss_conf 76542574788857980010003224577-------7556677882327999983----------999993898875278
Q ss_pred HHHHHHHCCCCCCCHHHHHH----HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 99999827999970479999----93689999646889988899999983002958898999999972
Q 000470 149 VIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 149 vl~el~tg~~~f~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 212 (1472)
++|||++|++||........ ..+... .++...++++++||.+||+.||++|||++|+|+|.
T Consensus 203 ilyel~tg~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp 267 (269)
T d2java1 203 LLYELCALMPPFTAFSQKELAGKIREGKFR---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 267 (269)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHCC
T ss_conf 999980188998998999999999718998---89743599999999997679955791899997298
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-42 Score=285.09 Aligned_cols=200 Identities=17% Similarity=0.186 Sum_probs=162.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||++++++. ++...|+||||++ |+|.+++.. +..+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus 61 l~HpnIv~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~ 139 (276)
T d1uwha_ 61 TRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139 (276)
T ss_dssp CCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred CCCCCEEEEEEEE-ECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECC
T ss_conf 7998786456797-155899999658998889998523578999999999999999988875099951614789979818
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982799
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~ 158 (1472)
++.+||+|||+++....... .....+..|++.|+|||.+... ....|+.++||||+||++|||++|++
T Consensus 140 ~~~~Kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~l~~~-------~~~~~~~~sDiwS~Gv~l~el~tg~~ 207 (276)
T d1uwha_ 140 DLTVKIGDFGLATVKSRWSG-----SHQFEQLSGSILWMAPEVIRMQ-------DKNPYSFQSDVYAFGIVLYELMTGQL 207 (276)
T ss_dssp TSSEEECCCCCSCC-----------------CCCCGGGCCHHHHTTC-------SSCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEECCCCCEEECCCCCC-----CCCCCCCCCCCCCCCHHHHHCC-------CCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99788750022133355677-----6312566557431799999505-------68999953151635999999997889
Q ss_pred CCCCH----HHHHH-HHCCCCCC-CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99704----79999-93689999-6468899888999999830029588989999999721
Q 000470 159 FFELS----HLLAY-RRGQYDPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 159 ~f~~~----~~~~~-~~~~~~~~-~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
||... ..... .++...+. ...+...++.+++||.+||+.||++|||+.|++++++
T Consensus 208 Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le 268 (276)
T d1uwha_ 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268 (276)
T ss_dssp TTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 9899896999999996588898600036555499999999975889768929999999999
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-42 Score=289.43 Aligned_cols=195 Identities=22% Similarity=0.232 Sum_probs=157.0
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCCC-CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 9998832012899948958999306679-598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+||||+.| ++......+..+++.+++.++.||+.||+|||++||+||||||+|||++..
T Consensus 57 l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~ 136 (299)
T d1ua2a_ 57 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN 136 (299)
T ss_dssp CCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred CCCCCEEEEEEEECCCCCEEEHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCC
T ss_conf 79999868985422587402204553450776554126677899999999999999988631635503577625885377
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||.++....... ...+..+++.|+|||.+.. ...|+.++||||+||++|||++|.+|
T Consensus 137 ~~~KL~DFG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~el~~g~~p 200 (299)
T d1ua2a_ 137 GVLKLADFGLAKSFGSPNR-------AYTHQVVTRWYRAPELLFG---------ARMYGVGVDMWAVGCILAELLLRVPF 200 (299)
T ss_dssp CCEEECCCGGGSTTTSCCC-------CCCCSCCCCTTCCHHHHTT---------CSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCCCCCCCCCCCCCCCC-------CCCCEECCHHHCCHHHHCC---------CCCCCHHHHHHHCCHHHHHHHHCCCC
T ss_conf 8411465761000578755-------4330204733363999726---------77888056436304289999859699
Q ss_pred CCCHHHH----HHHHCCCCCC------------------------CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9704799----9993689999------------------------64688998889999998300295889899999997
Q 000470 160 FELSHLL----AYRRGQYDPS------------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 160 f~~~~~~----~~~~~~~~~~------------------------~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|...... .+.+....+. ..+....++++++||.+||+.||++|+||+|+|+|
T Consensus 201 f~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 201 LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHCCCHHCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 99999999999999851899725452100021344303478988678565689999999999763894569089999679
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.7e-42 Score=284.23 Aligned_cols=201 Identities=14% Similarity=0.087 Sum_probs=160.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
|+||||+++++++..+...|+||||++ |+|.+++.. .+.+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus 84 l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~ 163 (299)
T d1jpaa_ 84 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS 163 (299)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred CCCCCCCCEEEEEEECCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
T ss_conf 79988861899996288779999722798530021045679999999999999999889885279835761504489889
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
++.+||+|||+++.......... ........+++.|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 164 ~~~~Kl~DFGla~~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~----------~~~~~~~sDvwS~Gvvl~el~t~g~ 231 (299)
T d1jpaa_ 164 NLVCKVSDFGLSRFLEDDTSDPT--YTSALGGKIPIRWTAPEAIQ----------YRKFTSASDVWSYGIVMWEVMSYGE 231 (299)
T ss_dssp TCCEEECCC-------------------------CGGGSCHHHHH----------SCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCCCCEECCCCCCCCE--EEECCCCCCCCCCCCHHHHH----------CCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99199888443157567777653--65025666883003878883----------6997861214453578999986799
Q ss_pred CCCCCHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9997047999993-6899996468899888999999830029588989999999721
Q 000470 158 PFFELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
+||.......... .........+...++.+++|+.+||+.||++||++.|+++.+.
T Consensus 232 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~ 288 (299)
T d1jpaa_ 232 RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288 (299)
T ss_dssp CTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 999999999999999737889997422699999999975879768929999999999
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-42 Score=284.03 Aligned_cols=193 Identities=15% Similarity=0.099 Sum_probs=159.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++++++++ ..|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++..
T Consensus 65 l~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~ 143 (277)
T d1xbba_ 65 LDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143 (277)
T ss_dssp CCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred CCCCCCCEEEEEECCC-CEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC
T ss_conf 7998985277775059-779999747889689997522578999999999999999766874795567776113102356
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCC
Q ss_conf 9099971366432368899999972122059998642375211123786322457999952047888799999982-799
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 158 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~~ 158 (1472)
+.++|+|||+++....... .........|++.|+|||.+. ...++.++||||+||++|||++ |++
T Consensus 144 ~~~kl~DFGla~~~~~~~~----~~~~~~~~~gt~~y~APE~l~----------~~~~~~~sDiwS~Gv~l~ellt~g~~ 209 (277)
T d1xbba_ 144 HYAKISDFGLSKALRADEN----YYKAQTHGKWPVKWYAPECIN----------YYKFSSKSDVWSFGVLMWEAFSYGQK 209 (277)
T ss_dssp TEEEECCCTTCEECCTTCS----EEEC----CCCGGGCCHHHHH----------HCEEEHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCCCHHHHHHCCCCCC----CCCCCCCCCCCCEECCCHHHC----------CCCCCCHHHHCCCHHHHHHHHHCCCC
T ss_conf 7512341345331343234----432244567784203916653----------79998434430340313289658999
Q ss_pred CCCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 997047999----99368999964688998889999998300295889899999997
Q 000470 159 FFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 ~f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
||......+ +.++. ....+...++++++||.+||+.||++||+++++++.
T Consensus 210 Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~ 263 (277)
T d1xbba_ 210 PYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 263 (277)
T ss_dssp SSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999989999999998289---999986567999999999758897689098999998
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-41 Score=282.49 Aligned_cols=198 Identities=16% Similarity=0.110 Sum_probs=162.3
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-9598897099-99999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||+++++++..+...|+||||++ |+|.+++... ..+++..+..++.|++.||+|+|+++|+||||||+|||++.
T Consensus 57 l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~ 136 (263)
T d1sm2a_ 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 136 (263)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG
T ss_pred CCCCCCCCCCCEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECC
T ss_conf 68997565352431599337999836999189975201347889999999999999877653164310443153266668
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-C
Q ss_conf 990999713664323688999999721220599986423752111237863224579999520478887999999827-9
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg-~ 157 (1472)
++.+||+|||+++....... .......|+..|+|||.+. ...|+.++||||+||++|||+++ .
T Consensus 137 ~~~~Kl~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~l~----------~~~~~~k~DVwS~Gvil~el~t~~~ 200 (263)
T d1sm2a_ 137 NQVIKVSDFGMTRFVLDDQY------TSSTGTKFPVKWASPEVFS----------FSRYSSKSDVWSFGVLMWEVFSEGK 200 (263)
T ss_dssp GGCEEECSCC------------------------CTTSCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCCHHEECCCCCC------EEECCEECCCCCCCHHHHC----------CCCCCCHHHHCCHHHHHHHHHHCCC
T ss_conf 87768655321002368873------3504300176667857860----------7999840332105999999987898
Q ss_pred CCCCCHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 999704799999368-999964688998889999998300295889899999997210
Q 000470 158 PFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 214 (1472)
Q Consensus 158 ~~f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~ 214 (1472)
+||......+..... .......+...++++++||.+||+.||++||+++|+++++..
T Consensus 201 ~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 258 (263)
T d1sm2a_ 201 IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258 (263)
T ss_dssp CTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 8877899999999998068889954367999999999765797689199999999999
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-41 Score=281.35 Aligned_cols=194 Identities=16% Similarity=0.133 Sum_probs=159.9
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC
Q ss_conf 999883201289994895899930667-959889709--99999999999999999999999988984248889979991
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~ 77 (1472)
|+||||+++++++.++...|+||||++ |+|.+++.. ...+++..++.++.|++.||+|||++||+||||||+|||++
T Consensus 70 l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~ 149 (287)
T d1opja_ 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 149 (287)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCCCEECCCCCEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
T ss_conf 79998826775274578547876314676067775303554157999999999999978889878930576045768998
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 5990999713664323688999999721220599986423752111237863224579999520478887999999827-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg- 156 (1472)
..+.+||+|||+++..... .........++..|+|||.+. ...|+.++||||+||++|||+++
T Consensus 150 ~~~~~Kl~DFG~a~~~~~~------~~~~~~~~~g~~~y~aPE~~~----------~~~~~~k~DiwS~Gv~l~ell~~~ 213 (287)
T d1opja_ 150 ENHLVKVADFGLSRLMTGD------TYTAHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYG 213 (287)
T ss_dssp GGGCEEECCCCCTTTCCSS------SSEEETTEEECGGGCCHHHHH----------HCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEECCCCCEEECCCC------CCEEECCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9992898324454653788------722103556654666927872----------799981043021789999998679
Q ss_pred CCCCCCHHHHHH---HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 999970479999---93689999646889988899999983002958898999999972
Q 000470 157 VPFFELSHLLAY---RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 157 ~~~f~~~~~~~~---~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 212 (1472)
.|+|........ ....+ ....+...++.+++||.+||+.||++|||++|+++.+
T Consensus 214 ~p~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L 270 (287)
T d1opja_ 214 MSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270 (287)
T ss_dssp CCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf 98877425999999985588--8888743309999999997577976893999999999
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-41 Score=280.45 Aligned_cols=196 Identities=16% Similarity=0.098 Sum_probs=158.7
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||++++++++++ ..|+||||++ |+|.+++.. +..+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 66 l~HpnIv~l~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~ 144 (285)
T d1u59a_ 66 LDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 144 (285)
T ss_dssp CCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE
T ss_pred CCCCCEEEEEEEECCC-EEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECC
T ss_conf 7998880686560368-079999807899689975212569999999999999999878998688105767646604546
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
.+.+||+|||+++....... .........+++.|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 145 ~~~~Kl~DFGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDVwS~Gv~l~E~lt~G~ 210 (285)
T d1u59a_ 145 RHYAKISDFGLSKALGADDS----YYTARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGVTMWEALSYGQ 210 (285)
T ss_dssp TTEEEECCCTTCEECTTCSC----EECCCCSSCCCGGGCCHHHHH----------HCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCHHHHCCCCCCC----CCCCCCCCCCCCCCCCHHHHH----------CCCCCCCCHHHCCHHHHHHHHHCCC
T ss_conf 88542033134211554343----211356211374335868872----------7999954123220178999993899
Q ss_pred CCCCCHH---HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9997047---9999936899996468899888999999830029588989999999721
Q 000470 158 PFFELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
+||.... .......... ...+...++++++||.+||+.||++||++.++++.++
T Consensus 211 ~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 211 KPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp CTTTTCCTHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99999799999999981899--9999767899999999975779768909999999999
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-41 Score=277.41 Aligned_cols=195 Identities=23% Similarity=0.336 Sum_probs=156.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 99988320128999489589993066795988970--9999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~gsL~d~l~--~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||++++++++++...|+||||+.+++.+++. ....+++.+++.++.|++.||+|||++||+||||||+|||++.
T Consensus 58 l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~ 137 (298)
T d1gz8a_ 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137 (298)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred CCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECC
T ss_conf 79983887445332243203788623774455544202568888999999999999999865288992135711401134
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982799
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~ 158 (1472)
++.+||+|||.++....+.. ......|++.|+|||.+.. ...++.++||||+||++|+|++|++
T Consensus 138 ~~~~kl~DFG~a~~~~~~~~-------~~~~~~gt~~y~apE~~~~---------~~~~~~~~DiwSlGvily~m~~G~~ 201 (298)
T d1gz8a_ 138 EGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRA 201 (298)
T ss_dssp TSCEEECSTTHHHHHCCCSB-------CTTCCBCCCTTCCHHHHTT---------CSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEECCCCCCEECCCCCC-------CCEEECCCCEEEEHHHHCC---------CCCCCCCCCCCCCCHHHHHHHHCCC
T ss_conf 67621035786134368864-------1001036521541122136---------6577742210333313427966879
Q ss_pred CCCCHHHHH----HHHCCCCCCC-------------------------CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 997047999----9936899996-------------------------46889988899999983002958898999999
Q 000470 159 FFELSHLLA----YRRGQYDPSQ-------------------------HLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 ~f~~~~~~~----~~~~~~~~~~-------------------------~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L 209 (1472)
||....... ..+....+.. ......++++++||.+||+.||++|||++|+|
T Consensus 202 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell 281 (298)
T d1gz8a_ 202 LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281 (298)
T ss_dssp SCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 98988999999999983289833314442224212434543222204441667899999999997639955791899996
Q ss_pred HH
Q ss_conf 97
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 282 ~H 283 (298)
T d1gz8a_ 282 AH 283 (298)
T ss_dssp TS
T ss_pred CC
T ss_conf 78
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-41 Score=278.48 Aligned_cols=186 Identities=23% Similarity=0.221 Sum_probs=158.2
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC--CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 99883201289994895899930667--9598897099999999999999999999999998898424888997999159
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF--NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~--gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
.||||++++++++++...|+||||+. +++.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 67 ~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~ 146 (273)
T d1xwsa_ 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN 146 (273)
T ss_dssp SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred CCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
T ss_conf 89881279999830996899998336862289998615899999999999999999999987797556676111477447
Q ss_pred -CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf -9099971366432368899999972122059998642375211123786322457999952047888799999982799
Q 000470 80 -NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 158 (1472)
Q Consensus 80 -~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~ 158 (1472)
+.+||+|||+++..... ...+..|++.|+|||.+... ..++.++||||+||++|||++|++
T Consensus 147 ~~~vkl~DFG~a~~~~~~---------~~~~~~GT~~y~aPE~~~~~---------~~~~~~~DiwSlGvilyell~g~~ 208 (273)
T d1xwsa_ 147 RGELKLIDFGSGALLKDT---------VYTDFDGTRVYSPPEWIRYH---------RYHGRSAAVWSLGILLYDMVCGDI 208 (273)
T ss_dssp TTEEEECCCTTCEECCSS---------CBCCCCSCGGGSCHHHHHHS---------CBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEECCCCCCEECCCC---------CCCCCCCCCCCCCHHHHCCC---------CCCCCCCCCCCCEEEEHHHHHCCC
T ss_conf 884897754653532444---------55665658774799998489---------978865332554034536756889
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99704799999368999964688998889999998300295889899999997
Q 000470 159 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 159 ~f~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
||...+ ...++... ++...++++++||.+||+.||++|||++|+|+|
T Consensus 209 Pf~~~~--~i~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 209 PFEHDE--EIIRGQVF----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp SCCSHH--HHHHCCCC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCH--HHHHCCCC----CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 988736--77615447----787799999999999760897589399998539
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.5e-40 Score=276.25 Aligned_cols=199 Identities=19% Similarity=0.239 Sum_probs=164.0
Q ss_pred CCCCCCCEEEEEEEECC----EEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 99988320128999489----5899930667-959889709999999999999999999999999889842488899799
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~----~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNIL 75 (1472)
++||||++++++++.+. ..|+||||++ ++|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 64 ~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIl 143 (277)
T d1o6ya_ 64 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 143 (277)
T ss_dssp CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 69998873114354326887669999977889871011203589999999999999999999998579527634675566
Q ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 91599099971366432368899999972122059998642375211123786322457999952047888799999982
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t 155 (1472)
++..+..+++|||.++........ .....+..|++.|+|||++. +..+++++||||+||++|||++
T Consensus 144 l~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~Gt~~Y~aPE~~~----------~~~~~~~~DiwSlGvilyellt 209 (277)
T d1o6ya_ 144 ISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGTAQYLSPEQAR----------GDSVDARSDVYSLGCVLYEVLT 209 (277)
T ss_dssp EETTSCEEECCCTTCEECC--------------------TTCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCHHHHC----------CCCCCCCEECCCCHHHHHHHHH
T ss_conf 575432010034443221235443----33346425762436999983----------9999966320265289999976
Q ss_pred CCCCCCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-CHHHHHHHHH
Q ss_conf 799997047999----993689999646889988899999983002958898-9999999721
Q 000470 156 EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-SAESYLQNYA 213 (1472)
Q Consensus 156 g~~~f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~-sa~e~L~~~~ 213 (1472)
|.+||....... ..+....+........++.+++||.+||++||++|| +++++++.+.
T Consensus 210 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 210 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp SSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHH
T ss_conf 979989969999999998469999710034789999999999866797677739999999999
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.7e-37 Score=256.28 Aligned_cols=293 Identities=13% Similarity=0.117 Sum_probs=217.7
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEE-ECCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 5363451123455558999079979999929997999939988644211110587-416973279999249979999917
Q 000470 1048 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY-HLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1048 G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~-~~~~~~I~~i~f~~~~~~las~s~ 1126 (1472)
|.+...++||.++|++++|+|++++|+|||.||+|++||+.+++.. .++ ..|...|++++|.++++ +++++.
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~------~~~~~~h~~~v~~v~~~~~g~-~~~~~~ 74 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN------RVFPDVHATMITGIKTTSKGD-LFTVSW 74 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE------ECSSCSCSSCEEEEEECTTSC-EEEEET
T ss_pred CCCCEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEE------EEECCCCCCCEEEEEEECCCE-EECCCC
T ss_conf 8613684888878289999799999999908992999999999688------998378877489988403311-210231
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECC
Q ss_conf 99499998011246888643346854523302799858999971379987219999958974999959989865400047
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|+.+++|+..... ..........+...+..+.++++ +..++. +.++.+.+|+.... ....
T Consensus 75 d~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~~---g~~~~~-~~~~~i~~~~~~~~---~~~~-- 134 (299)
T d1nr0a2 75 DDHLKVVPAGGSG-----------VDSSKAVANKLSSQPLGLAVSAD---GDIAVA-ACYKHIAIYSHGKL---TEVP-- 134 (299)
T ss_dssp TTEEEEECSSSSS-----------SCTTSCCEEECSSCEEEEEECTT---SSCEEE-EESSEEEEEETTEE---EEEE--
T ss_pred EEEEEEECCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCC---CCCCCC-CCCCCCCCCCCCCC---CCCC--
T ss_conf 0268873167762-----------01110001111344321001122---111112-22222211111111---1101--
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf 87665389999699989999937993999978999510067415667720478425999974446899979999869949
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1286 (1472)
Q Consensus 1207 ~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V 1286 (1472)
....+++++++|++.++++|+.+|.+.+||++.+.........+..+|..+.+ +|++. ++++++.++.|
T Consensus 135 -~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~-~~~~~---------~l~~~~~d~~i 203 (299)
T d1nr0a2 135 -ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF-SNNGA---------FLVATDQSRKV 203 (299)
T ss_dssp -CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEE-CTTSS---------EEEEEETTSCE
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC---------CCCCCCCCCCC
T ss_conf -11123322111111111111111111111111111111111111111111111-11111---------11111111111
Q ss_pred EEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CE
Q ss_conf 99986887177898613588987668776323588988999753323445332223448999886781583448999-18
Q 000470 1287 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DL 1365 (1472)
Q Consensus 1287 ~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~L 1365 (1472)
.+||+.++....... ...+|...|++++|+|++ .+
T Consensus 204 ~~~~~~~~~~~~~~~--------------------------------------------~~~~h~~~v~~l~~s~~~~~l 239 (299)
T d1nr0a2 204 IPYSVANNFELAHTN--------------------------------------------SWTFHTAKVACVSWSPDNVRL 239 (299)
T ss_dssp EEEEGGGTTEESCCC--------------------------------------------CCCCCSSCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCCCCCC--------------------------------------------CCCCCCCCCCCCCCCCCCCCE
T ss_conf 111111111111111--------------------------------------------111111111111246664513
Q ss_pred EECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 98169990999739999996497189988999984067860586199995405886401246788754201777887530
Q 000470 1366 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1445 (1472)
Q Consensus 1366 iTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1445 (1472)
++|+.|+.|++||+..+......... ..|...
T Consensus 240 ~sgs~dg~i~iwd~~~~~~~~~~~~~------------------------------------------------~~~~~~ 271 (299)
T d1nr0a2 240 ATGSLDNSVIVWNMNKPSDHPIIIKG------------------------------------------------AHAMSS 271 (299)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETT------------------------------------------------SSTTSC
T ss_pred EEECCCCEEEEEECCCCCCCEEEEEC------------------------------------------------CCCCCC
T ss_conf 88828997999989999731489834------------------------------------------------898896
Q ss_pred EEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 458752206982899980894389839
Q 000470 1446 ILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1446 I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
|..++ .+++.+|+|++.||.|++|+
T Consensus 272 v~~~~--~~~~~~l~s~s~D~~i~iWd 296 (299)
T d1nr0a2 272 VNSVI--WLNETTIVSAGQDSNIKFWN 296 (299)
T ss_dssp EEEEE--EEETTEEEEEETTSCEEEEE
T ss_pred EEEEE--ECCCCEEEEEECCCEEEEEE
T ss_conf 89999--77989999992899799994
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-41 Score=278.63 Aligned_cols=194 Identities=15% Similarity=0.096 Sum_probs=156.9
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC
Q ss_conf 999883201289994895899930667-95988970999--999999999999999999999988984248889979991
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~ 77 (1472)
+.||||+++++++. +...|+||||++ |+|.+++.... .+++.++..|+.||+.||.|||++||+||||||+|||++
T Consensus 65 l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~ 143 (272)
T d1qpca_ 65 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143 (272)
T ss_dssp CCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred CCCCCEEEEEEEEC-CCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE
T ss_conf 79998857873104-59769999957898288887514789887889999999999999999748954675642251562
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 5990999713664323688999999721220599986423752111237863224579999520478887999999827-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg- 156 (1472)
.++.+||+|||+++...... ........+++.|+|||.+. ...++.++||||+||++|||+++
T Consensus 144 ~~~~~Kl~DFGla~~~~~~~------~~~~~~~~gt~~y~APE~~~----------~~~~~~~sDvwS~Gvvl~ellt~~ 207 (272)
T d1qpca_ 144 DTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTHG 207 (272)
T ss_dssp TTSCEEECCCTTCEECSSSC------EECCTTCCCCTTTSCHHHHH----------HCEECHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEECCCCCEEECCCCC------CCCCCCCCCCCCCCCHHHHH----------CCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 02440423410147735886------44203567744445828983----------799982456452579999999689
Q ss_pred CCCCCCHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9999704799999368-999964688998889999998300295889899999997
Q 000470 157 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
.|+|............ .......+...++++++||.+||+.||++|||++++++.
T Consensus 208 ~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~ 263 (272)
T d1qpca_ 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (272)
T ss_dssp CCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 88888889999999997068888965571999999999758897689399999998
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-40 Score=273.27 Aligned_cols=193 Identities=24% Similarity=0.281 Sum_probs=153.2
Q ss_pred CCCCCCCEEEEEEEE-----CCEEEEEECCCCCCHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf 999883201289994-----8958999306679598897--099999999999999999999999998898424888997
Q 000470 1 MSSTPCVHKKFWQET-----DKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 73 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~-----~~~~ylV~e~~~gsL~d~l--~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeN 73 (1472)
+.||||+++++++.. +...|+++||+.+.+.+.. ...+.+++.+++.+++|++.||+|||++||+||||||+|
T Consensus 67 ~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~N 146 (305)
T d1blxa_ 67 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 146 (305)
T ss_dssp TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred CCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCE
T ss_conf 58988023663221466666746999997405871444443037899989999999999999999975889835798627
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99915990999713664323688999999721220599986423752111237863224579999520478887999999
Q 000470 74 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 153 (1472)
Q Consensus 74 ILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el 153 (1472)
||++..+.+||+|||.++.... .....+..||+.|+|||.+. +..|+.++||||+||++|||
T Consensus 147 ILi~~~~~~kl~dfg~~~~~~~--------~~~~~~~~gT~~Y~APE~~~----------~~~y~~~~DiwSlG~il~el 208 (305)
T d1blxa_ 147 ILVTSSGQIKLADFGLARIYSF--------QMALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEM 208 (305)
T ss_dssp EEECTTCCEEECSCCSCCCCCG--------GGGGCCCCCCCTTCCHHHHT----------TCCCCTHHHHHHHHHHHHHH
T ss_pred EEECCCCCEEECCHHHHHHHCC--------CCCCCCCCCCHHHCCCCHHC----------CCCCCHHEHHHCHHHHHHHH
T ss_conf 8985899754210001011002--------34577765485114831001----------79888111000328999999
Q ss_pred HHCCCCCCCHHHHH----HHHC--C---------------------CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 82799997047999----9936--8---------------------9999646889988899999983002958898999
Q 000470 154 FLEVPFFELSHLLA----YRRG--Q---------------------YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE 206 (1472)
Q Consensus 154 ~tg~~~f~~~~~~~----~~~~--~---------------------~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~ 206 (1472)
++|++||....... +... . ..+...+....++.+++||.+||+.||++||||+
T Consensus 209 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~ 288 (305)
T d1blxa_ 209 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 288 (305)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH
T ss_conf 87879989989899999999840799611053211110333022345645440445899999999998748966791899
Q ss_pred HHHHH
Q ss_conf 99997
Q 000470 207 SYLQN 211 (1472)
Q Consensus 207 e~L~~ 211 (1472)
|+|+|
T Consensus 289 e~L~H 293 (305)
T d1blxa_ 289 SALSH 293 (305)
T ss_dssp HHHTS
T ss_pred HHHCC
T ss_conf 99669
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9e-37 Score=251.59 Aligned_cols=290 Identities=12% Similarity=0.134 Sum_probs=211.4
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 34555589990799799999299979999399886442111105874169732799992499799999179949999801
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1136 (1472)
Q Consensus 1057 H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iwdi~ 1136 (1472)
+++.+..++++|+++.|+.++ ++.|.+||+..++ ....+.+|...|++++|+|+++.|++|+.||+|++|++.
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~------~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~ 88 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 88 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred CCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCC------EEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEE
T ss_conf 788759999969989999996-9999999999996------617974788888999994899967225567367466310
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEC--CCEEEEEECCCCCCCCEEECCCCCCCEEE
Q ss_conf 1246888643346854523302799858999971379987219999958--97499995998986540004787665389
Q 000470 1137 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ--NCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1214 (1472)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~--dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1214 (1472)
... .........+...+.+++|+++ ++.+++++. +..+++||+.+++...++.. |.+.|++
T Consensus 89 ~~~------------~~~~~~~~~~~~~v~~v~~s~d---~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~--h~~~v~~ 151 (311)
T d1nr0a1 89 QTT------------HILKTTIPVFSGPVKDISWDSE---SKRIAAVGEGRERFGHVFLFDTGTSNGNLTG--QARAMNS 151 (311)
T ss_dssp STT------------CCEEEEEECSSSCEEEEEECTT---SCEEEEEECCSSCSEEEEETTTCCBCBCCCC--CSSCEEE
T ss_pred CCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC
T ss_conf 111------------1000013433575433233311---1000111122111111111111111111111--1111111
Q ss_pred EEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCC
Q ss_conf 999699989-9999379939999789995100674156677204784259999744468999799998699499998688
Q 000470 1215 LVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAEN 1293 (1472)
Q Consensus 1215 i~~sp~g~~-LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~t 1293 (1472)
++|+|++.+ +++|+.||.|++||++.......+.. +..+|+.+.+ +|++. ++++++.++.+.+||..+
T Consensus 152 v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~-~~~~i~~v~~-~p~~~---------~l~~~~~d~~v~~~d~~~ 220 (311)
T d1nr0a1 152 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRY-NPDGS---------LFASTGGDGTIVLYNGVD 220 (311)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEE-CTTSS---------EEEEEETTSCEEEEETTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC-CCCCC---------CCCCCCCCCCCCCCCCCC
T ss_conf 111211101200011221111111111111111111-1111111234-76422---------121111111110001244
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCC
Q ss_conf 7177898613588987668776323588988999753323445332223448999886781583448999-189816999
Q 000470 1294 GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDL 1372 (1472)
Q Consensus 1294 g~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg 1372 (1472)
+.....+..... ...+|...|++++|+|++ +|+||+.|+
T Consensus 221 ~~~~~~~~~~~~----------------------------------------~~~~h~~~V~~~~~s~~~~~l~tgs~Dg 260 (311)
T d1nr0a1 221 GTKTGVFEDDSL----------------------------------------KNVAHSGSVFGLTWSPDGTKIASASADK 260 (311)
T ss_dssp CCEEEECBCTTS----------------------------------------SSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCCCCCCCC----------------------------------------CCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 641122211111----------------------------------------1100246532102478899999993799
Q ss_pred EEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
Q ss_conf 09997399999964971899889999840678605861999954058864012467887542017778875304587522
Q 000470 1373 KIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSV 1452 (1472)
Q Consensus 1373 ~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~ 1452 (1472)
.|++||+++++....+.+.. .+...+.++
T Consensus 261 ~v~iwd~~t~~~~~~l~~~~------------------------------------------------~~~~~~~~~--- 289 (311)
T d1nr0a1 261 TIKIWNVATLKVEKTIPVGT------------------------------------------------RIEDQQLGI--- 289 (311)
T ss_dssp EEEEEETTTTEEEEEEECCS------------------------------------------------SGGGCEEEE---
T ss_pred EEEEEECCCCCEEEEEECCC------------------------------------------------CCCCEEEEE---
T ss_conf 69999999996999997999------------------------------------------------863329999---
Q ss_pred ECCCCEEEEECCCCEEEECC
Q ss_conf 06982899980894389839
Q 000470 1453 KLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1453 ~~~~~~LvS~s~DG~IkVWk 1472 (1472)
...+..|++++.||.|++|+
T Consensus 290 ~~~~~~l~s~s~dG~i~~wd 309 (311)
T d1nr0a1 290 IWTKQALVSISANGFINFVN 309 (311)
T ss_dssp EECSSCEEEEETTCCEEEEE
T ss_pred EECCCEEEEEECCCEEEEEE
T ss_conf 95199999998999799995
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-40 Score=271.41 Aligned_cols=194 Identities=21% Similarity=0.277 Sum_probs=151.5
Q ss_pred CCCCCCCEEEEEEEEC------CEEEEEECCCCCCHHHHH----HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 9998832012899948------958999306679598897----099999999999999999999999998898424888
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRL----STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 70 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~------~~~ylV~e~~~gsL~d~l----~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIK 70 (1472)
|+||||+++++++... ...|+||||+++++.+.+ .....+++.+++.++.||+.||+|||++||+|||||
T Consensus 70 l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiK 149 (350)
T d1q5ka_ 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149 (350)
T ss_dssp CCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred CCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 68989873878997447657731899998416886078888631036899999999999999999999986687645788
Q ss_pred CCCEEECCCC-CEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9979991599-099971366432368899999972122059998642375211123786322457999952047888799
Q 000470 71 CENVLVTSWN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 71 peNILv~~~~-~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~v 149 (1472)
|+|||++.++ .+||+|||+++...... ...+..|++.|+|||.+.. ...|+.++||||+||+
T Consensus 150 p~NILl~~~~~~~kl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DIwSlG~i 212 (350)
T d1q5ka_ 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGE--------PNVSYICSRYYRAPELIFG---------ATDYTSSIDVWSAGCV 212 (350)
T ss_dssp GGGEEECTTTCCEEECCCTTCEECCTTS--------CCCSCCSCTTSCCHHHHTT---------CSSCCTHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEEECCCCHHHCCCCC--------CCCCCCCCCCCCCHHHHHC---------CCCCCCCEEECCCCEE
T ss_conf 6037873589711673366054404776--------5320025555568277640---------4688821000246527
Q ss_pred HHHHHHCCCCCCCHHHHH----HHH-------------------CCCCC------CCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 999982799997047999----993-------------------68999------9646889988899999983002958
Q 000470 150 IAELFLEVPFFELSHLLA----YRR-------------------GQYDP------SQHLEKIPDSGIRKMILHMIQLEPE 200 (1472)
Q Consensus 150 l~el~tg~~~f~~~~~~~----~~~-------------------~~~~~------~~~l~~~~~~~l~~lI~~mL~~dP~ 200 (1472)
+|||++|.+||....... +.+ ..+.. ........++++++||.+||+.||+
T Consensus 213 l~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~ 292 (350)
T d1q5ka_ 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292 (350)
T ss_dssp HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGG
T ss_pred EEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 78550287998987999999999997489817765430621011035544567444431568999999999997658955
Q ss_pred CCCCHHHHHHH
Q ss_conf 89899999997
Q 000470 201 LRFSAESYLQN 211 (1472)
Q Consensus 201 ~R~sa~e~L~~ 211 (1472)
+|+||.|+|+|
T Consensus 293 ~R~ta~e~L~H 303 (350)
T d1q5ka_ 293 ARLTPLEACAH 303 (350)
T ss_dssp GSCCHHHHHTS
T ss_pred HCCCHHHHHCC
T ss_conf 79299999669
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.5e-36 Score=250.20 Aligned_cols=330 Identities=13% Similarity=0.116 Sum_probs=226.0
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 34555589990799799999299979999399886442111105874169732799992499799999179949999801
Q 000470 1057 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1136 (1472)
Q Consensus 1057 H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iwdi~ 1136 (1472)
+.++|++++|+||++++|+|+.||.|+|||....+ ......+.+|.+.|.+++|+|+++.|++|+.||.|++|+++
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~----~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~ 81 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC----EEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEC
T ss_conf 99883899998999999999488989999888997----89999955889988899997999999999799939998620
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEE--CCCCCCCEEE
Q ss_conf 12468886433468545233027998589999713799872199999589749999599898654000--4787665389
Q 000470 1137 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK--AIPEEGYVSS 1214 (1472)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~--~~~h~g~Its 1214 (1472)
... .........+...+.++.|+|+ ++.+++++.++.|++|++.......... ...|.+.|++
T Consensus 82 ~~~------------~~~~~~~~~~~~~v~~i~~~p~---~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~ 146 (371)
T d1k8kc_ 82 GRT------------WKPTLVILRINRAARCVRWAPN---EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 146 (371)
T ss_dssp TTE------------EEEEEECCCCSSCEEEEEECTT---SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 332------------1100122322110001111111---2110000025763025442033433111001011122211
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCCCCEE-----------------ECCCCCCCEEEEEECCCCCCCCCCCCCCEE
Q ss_conf 999699989999937993999978999510067-----------------415667720478425999974446899979
Q 000470 1215 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSW-----------------QYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1215 i~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~-----------------~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1277 (1472)
++|+|++.+|++|+.||.+++||++........ ...+...|+.+++ +|++ ..+
T Consensus 147 v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g---------~~l 216 (371)
T d1k8kc_ 147 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF-SANG---------SRV 216 (371)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE-CSSS---------SEE
T ss_pred CCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEE-ECCC---------CCC
T ss_conf 111111111000134767999840157643100122111111110112440476674789875-1233---------210
Q ss_pred EEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99986994999986887177898613588987668776323588988999753323445332223448999886781583
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
++++.|+.|.+||+.++.+...+..+ ..+|.++
T Consensus 217 ~s~~~d~~i~iwd~~~~~~~~~~~~~-----------------------------------------------~~~v~s~ 249 (371)
T d1k8kc_ 217 AWVSHDSTVCLADADKKMAVATLASE-----------------------------------------------TLPLLAV 249 (371)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECS-----------------------------------------------SCCEEEE
T ss_pred CCCCCCCCCEEEEEECCCCEEEEECC-----------------------------------------------CCCCEEE
T ss_conf 00014786058864101210000014-----------------------------------------------6652036
Q ss_pred CCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 44899918981699909997399999964971899889999840678605861999954058864012467887542017
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1437 (1472)
Q Consensus 1358 ~~~p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1437 (1472)
+|++++.++++|.|+.+++|+...........+..... .. .............. ........ ........
T Consensus 250 ~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~ 319 (371)
T d1k8kc_ 250 TFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP---KQ-SSQRGLTARERFQN-----LDKKASSE-GSAAAGAG 319 (371)
T ss_dssp EEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC------------CHHHHHHH-----CCCCC----------CC
T ss_pred EECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCC---CC-CCCCCCCCEEEEEC-----CCCEEEEE-CCCCCCCE
T ss_conf 54699979999819926787760898628872020676---54-21246220016850-----65205871-24556614
Q ss_pred CCCCCCCCEEEEEEEECC---CCEEEEECCCCEEEECC
Q ss_conf 778875304587522069---82899980894389839
Q 000470 1438 SAGCHRDSILSLGSVKLN---QRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1438 ~~~~H~d~I~~ia~~~~~---~~~LvS~s~DG~IkVWk 1472 (1472)
....|.+.|++++.+... ...++|+|.||.|+||+
T Consensus 320 ~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~ 357 (371)
T d1k8kc_ 320 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357 (371)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ECCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEE
T ss_conf 12555698899999489986567999991899399996
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-40 Score=272.07 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=162.6
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||+++++++.++...|+||||+. |+|.+++.. ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 56 l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~ 135 (258)
T d1k2pa_ 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND 135 (258)
T ss_dssp CCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT
T ss_pred CCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
T ss_conf 68986015889985078169999704899388864102467768999999999999999875468434665413588769
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
.+.+||+|||+++........ ......++..|+|||.+. ...++.++||||+||++|||++ |+
T Consensus 136 ~~~~kl~DfG~a~~~~~~~~~------~~~~~~~t~~y~aPE~~~----------~~~~~~ksDiwS~G~~l~el~t~g~ 199 (258)
T d1k2pa_ 136 QGVVKVSDFGLSRYVLDDEYT------SSVGSKFPVRWSPPEVLM----------YSKFSSKSDIWAFGVLMWEIYSLGK 199 (258)
T ss_dssp TCCEEECCCSSCCBCSSSSCC------CCCCSCCCGGGCCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCHHHEECCCCCCE------EECCCCCCCCCCCCHHHC----------CCCCCCCEEECCCCHHHHHHHHCCC
T ss_conf 984798861442023578722------524657887757807863----------7998852103364324673975599
Q ss_pred CCCCCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99970479999936899-996468899888999999830029588989999999721
Q 000470 158 PFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
+||......+....... .....+...++++++||.+||+.||++|||++++++|+.
T Consensus 200 ~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 200 MPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 998899999999999807978996546599999999976689768939999998741
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-40 Score=275.37 Aligned_cols=197 Identities=15% Similarity=0.087 Sum_probs=159.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
|+||||+++++++.++...|+|+||+. ++|.+.+.. .+.+++.++..++.|++.||+|||+++|+||||||+|||++.
T Consensus 66 l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~ 145 (283)
T d1mqba_ 66 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS 145 (283)
T ss_dssp CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred CCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC
T ss_conf 68987832367783388038999721357402221023454208999999999998541212123425765644278889
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-C
Q ss_conf 990999713664323688999999721220599986423752111237863224579999520478887999999827-9
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg-~ 157 (1472)
++.+||+|||+++....... ..+......|+..|+|||.+. ...++.++||||+||++|||+++ .
T Consensus 146 ~~~~Kl~DFGla~~~~~~~~----~~~~~~~~~gt~~Y~APE~l~----------~~~~~~~sDI~S~Gvil~el~t~~~ 211 (283)
T d1mqba_ 146 NLVCKVSDFGLSRVLEDDPE----ATYTTSGGKIPIRWTAPEAIS----------YRKFTSASDVWSFGIVMWEVMTYGE 211 (283)
T ss_dssp TCCEEECCCCC---------------------CCCGGGSCHHHHH----------SCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCEEEECCCCHHHCCCCCCC----CCEEECCCCCCCCCCCHHHHC----------CCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 98499845510300357876----526742677773434888870----------4999973556344898999996798
Q ss_pred CCCCCHHHHHH---HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99970479999---936899996468899888999999830029588989999999721
Q 000470 158 PFFELSHLLAY---RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~~~~~~---~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
++|......+. ...... ...+...++.+++||.+||+.||++||++.|+++.+.
T Consensus 212 ~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~ 268 (283)
T d1mqba_ 212 RPYWELSNHEVMKAINDGFR--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268 (283)
T ss_dssp CTTTTCCHHHHHHHHHTTCC--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 86556899999999863578--9985045799999999977679768939999999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-40 Score=273.84 Aligned_cols=195 Identities=12% Similarity=0.110 Sum_probs=157.5
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||+++++++.++. .++++||+. |+|.+.+.. ...+++.+++.++.||+.||.|||++||+||||||+|||++.
T Consensus 68 l~HpnIv~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~ 146 (317)
T d1xkka_ 68 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 146 (317)
T ss_dssp CCCTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE
T ss_pred CCCCCEEEEEEEEECCC-EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECC
T ss_conf 79988815899996198-36999842687401011133457999999999999999999998769504762120311679
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
.+.+||+|||+++....... ........|+..|+|||.+. .+.|+.++||||+||++|||++ |.
T Consensus 147 ~~~~kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~l~----------~~~~~~~sDvwS~Gvil~el~t~g~ 211 (317)
T d1xkka_ 147 PQHVKITDFGLAKLLGAEEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGS 211 (317)
T ss_dssp TTEEEECCCSHHHHTTTTCC-------------CCTTTSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEECCCCCEECCCCCC-----CCCCCCCCCCCCCCCHHHHH----------CCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 98758602552223354445-----32236510586446708874----------6999835654407999999997799
Q ss_pred CCCCCH---HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999704---79999936899996468899888999999830029588989999999721
Q 000470 158 PFFELS---HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
+||... +..........+ ..+...++.+++||.+||+.||++|||+.|+++++.
T Consensus 212 ~p~~~~~~~~~~~~i~~~~~~--~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~ 268 (317)
T d1xkka_ 212 KPYDGIPASEISSILEKGERL--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268 (317)
T ss_dssp CTTTTSCGGGHHHHHHHTCCC--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 999999989999999759989--998556899999999847899346919999999999
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-40 Score=274.25 Aligned_cols=195 Identities=15% Similarity=0.184 Sum_probs=157.8
Q ss_pred CCCCCCEEEEEEEE-CCEEEEEECCCC-CCHHHHHHCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99883201289994-895899930667-9598897099----------------99999999999999999999999889
Q 000470 2 SSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKG 63 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~-~~~~ylV~e~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qil~aL~~lH~~g 63 (1472)
.||||+.++.++.. +...|+||||++ |+|.+++..+ ..+++.+++.++.||+.||.|||++|
T Consensus 75 ~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 154 (299)
T d1ywna1 75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 154 (299)
T ss_dssp CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99849974115404797579999845899299999853666665322202332146899999999999999999887379
Q ss_pred CEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 84248889979991599099971366432368899999972122059998642375211123786322457999952047
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 143 (1472)
Q Consensus 64 IvH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DI 143 (1472)
|+||||||+|||++..+.+||+|||+++........ ....+..|++.|+|||.+. ...++.++||
T Consensus 155 ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~l~----------~~~~~~~sDi 219 (299)
T d1ywna1 155 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-----VRKGDARLPLKWMAPETIF----------DRVYTIQSDV 219 (299)
T ss_dssp CCCSCCCGGGEEECGGGCEEECC------CCSCTTS-----CCTTSCCCGGGGCCHHHHH----------HCCCCHHHHH
T ss_pred CCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCC-----CCCCCEEECCCCCCHHHHH----------CCCCCCCCCE
T ss_conf 717867731065779982898457520011356652-----2247516672102036864----------6889966322
Q ss_pred HHHHHHHHHHHHC-CCCCCCHH----HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 8887999999827-99997047----9999936899996468899888999999830029588989999999721
Q 000470 144 FAVGCVIAELFLE-VPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 144 wSlG~vl~el~tg-~~~f~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
||+||++|||+++ .+||.... .......... ...+...+++++++|.+||+.||++|||++|+++|+.
T Consensus 220 wS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 220 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred EEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 136789999986889999899989999999963898--8888657899999999976779667919999999997
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-40 Score=271.75 Aligned_cols=194 Identities=15% Similarity=0.069 Sum_probs=161.8
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99883201289994895899930667-9598897099----------------999999999999999999999998898
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qil~aL~~lH~~gI 64 (1472)
+||||+++++++.++...|+||||++ |+|.++|..+ ..+++.++..++.||+.||.|+|++||
T Consensus 69 ~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~i 148 (309)
T d1fvra_ 69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 148 (309)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CCCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89988367888841873699998028986999986403555551231012345789999999999999999876630895
Q ss_pred EECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 42488899799915990999713664323688999999721220599986423752111237863224579999520478
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++..+.+||+|||+++........ ....++..|+|||.+. ...++.++|||
T Consensus 149 iHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~--------~~~~gt~~y~aPE~l~----------~~~~~~~sDvw 210 (309)
T d1fvra_ 149 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK--------TMGRLPVRWMAIESLN----------YSVYTTNSDVW 210 (309)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC------------CCTTTCCHHHHH----------HCEECHHHHHH
T ss_pred CCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC--------CCEECCCCCCCHHHHC----------CCCCCCCCEEE
T ss_conf 45550520489868876387434432244422345--------5301377555538752----------69999622153
Q ss_pred HHHHHHHHHHHC-CCCCCCHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 887999999827-99997047999993689-9996468899888999999830029588989999999721
Q 000470 145 AVGCVIAELFLE-VPFFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~vl~el~tg-~~~f~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
|+||++|||++| .+||......+...... ......+...++++++||.+||+.||++||+++|+++++.
T Consensus 211 SfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~ 281 (309)
T d1fvra_ 211 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281 (309)
T ss_dssp HHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 13889999983689999999999999999826888887667899999999976789668949999999999
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.4e-39 Score=269.91 Aligned_cols=195 Identities=23% Similarity=0.285 Sum_probs=157.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCCC-CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 9998832012899948958999306679-598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||+++++++..+...|+++||+.+ .+..+...++.+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 57 l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~ 136 (286)
T d1ob3a_ 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136 (286)
T ss_dssp CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred CCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCC
T ss_conf 79986876601204677315899740045678998604775144568999999999998605748826787750568689
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827999
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 159 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~ 159 (1472)
+.+||+|||.++....+... .....+++.|+|||.+.. ...++.++||||+||++|||++|++|
T Consensus 137 ~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~y~~pE~~~~---------~~~~~~~~DiwslGv~l~el~~G~~p 200 (286)
T d1ob3a_ 137 GELKIADFGLARAFGIPVRK-------YTHEIVTLWYRAPDVLMG---------SKKYSTTIDIWSVGCIFAEMVNGTPL 200 (286)
T ss_dssp SCEEECCTTHHHHHCC----------------CCCTTCCHHHHTT---------CCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEECCCCCCEECCCCCCC-------CCEECCCCHHHHHHHHHC---------CCCCCCCEEEHHCCCHHHHHHHCCCC
T ss_conf 97873236643011467654-------101024311013788717---------88888410021117589999779799
Q ss_pred CCCHHH----HHHHHCCCC-------------------------CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 970479----999936899-------------------------996468899888999999830029588989999999
Q 000470 160 FELSHL----LAYRRGQYD-------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 210 (1472)
Q Consensus 160 f~~~~~----~~~~~~~~~-------------------------~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~ 210 (1472)
|..... ..+.+.... +........++.+++||.+||+.||++|+|++|+|+
T Consensus 201 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 89889899999999863899711042123332214333335676466651258999999999986689668909999856
Q ss_pred H
Q ss_conf 7
Q 000470 211 N 211 (1472)
Q Consensus 211 ~ 211 (1472)
|
T Consensus 281 H 281 (286)
T d1ob3a_ 281 H 281 (286)
T ss_dssp S
T ss_pred C
T ss_conf 9
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-40 Score=271.15 Aligned_cols=197 Identities=17% Similarity=0.147 Sum_probs=163.1
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99883201289994895899930667-95988970999----------------99999999999999999999998898
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGI 64 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qil~aL~~lH~~gI 64 (1472)
+||||+++++++..+...|+||||+. |+|.++|..+. .+++.+++.++.||+.||+|||++||
T Consensus 77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~i 156 (299)
T d1fgka_ 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC 156 (299)
T ss_dssp CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 99969734652201886899997369990999998606776432223345743467999999999999999987663797
Q ss_pred EECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 42488899799915990999713664323688999999721220599986423752111237863224579999520478
Q 000470 65 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIF 144 (1472)
Q Consensus 65 vH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIw 144 (1472)
+||||||+|||++.++.+||+|||.++......... ......+++.|+|||.+. ++.|++++|||
T Consensus 157 vHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~l~----------~~~y~~k~Diw 221 (299)
T d1fgka_ 157 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALF----------DRIYTHQSDVW 221 (299)
T ss_dssp CCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTC-----CCTTSCCGGGGSCHHHHH----------HCCCCHHHHHH
T ss_pred EEEEECCCCEEECCCCCEEECCCHHHCCCCCCCCCC-----CCCCCCCCHHHHHHHHHC----------CCCCCCHHHHH
T ss_conf 863022102245478976762211101135555543-----146678884663266751----------79888255547
Q ss_pred HHHHHHHHHHH-CCCCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 88799999982-7999970479999936-899996468899888999999830029588989999999721
Q 000470 145 AVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 145 SlG~vl~el~t-g~~~f~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
|+||++|||++ |.+||........... ........+...++.+++||.+||+.||++|||+.|+++.+.
T Consensus 222 S~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~ 292 (299)
T d1fgka_ 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292 (299)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 75888887401798989999999999999728888987435299999999976679767939999999998
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=270.31 Aligned_cols=191 Identities=21% Similarity=0.251 Sum_probs=154.7
Q ss_pred CCCCCCCEEEEEEEECC------EEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
Q ss_conf 99988320128999489------589993066795988970999999999999999999999999988984248889979
Q 000470 1 MSSTPCVHKKFWQETDK------AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~------~~ylV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNI 74 (1472)
|+||||+++++++.... ..|+||||+.++|.+.+... .+++.+++.++.||+.||+|||++||+||||||+||
T Consensus 74 l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NI 152 (346)
T d1cm8a_ 74 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL 152 (346)
T ss_dssp CCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred CCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 6898754799986357655554159999840552189998740-226999999999999999998737876456685111
Q ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99159909997136643236889999997212205999864237521112378632245799995204788879999998
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~ 154 (1472)
|++.++.++|+|||.++..... .....+++.|+|||.+.+ ...++.++||||+||++|||+
T Consensus 153 L~~~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~ell 213 (346)
T d1cm8a_ 153 AVNEDCELKILDFGLARQADSE----------MTGYVVTRWYRAPEVILN---------WMRYTQTVDIWSVGCIMAEMI 213 (346)
T ss_dssp EECTTCCEEECCCTTCEECCSS----------CCSSCSCGGGCCTHHHHT---------TTCCCTTHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCEECCCCC----------CCCCCCCCCCCCHHHHCC---------CCCCCCCCHHHCCHHHHHHHH
T ss_conf 1210012211343102206876----------310245533358899817---------878996501030038999999
Q ss_pred HCCCCCCCHHHHHH---------------------------HHCCCC----CCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 27999970479999---------------------------936899----99646889988899999983002958898
Q 000470 155 LEVPFFELSHLLAY---------------------------RRGQYD----PSQHLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~~f~~~~~~~~---------------------------~~~~~~----~~~~l~~~~~~~l~~lI~~mL~~dP~~R~ 203 (1472)
+|.+||........ ..+... .........++.+++||.+||+.||++||
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ 293 (346)
T d1cm8a_ 214 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 293 (346)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred HCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 78699888976899999985037884888865300034433115786665566775568999999999997729955792
Q ss_pred CHHHHHHH
Q ss_conf 99999997
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~e~L~~ 211 (1472)
|++|+|+|
T Consensus 294 ta~eiL~H 301 (346)
T d1cm8a_ 294 TAGEALAH 301 (346)
T ss_dssp CHHHHHHS
T ss_pred CHHHHHCC
T ss_conf 99999639
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-40 Score=274.74 Aligned_cols=193 Identities=18% Similarity=0.179 Sum_probs=158.0
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
++||||+++++++. +...|+||||+. |+|.+++.. +..+++.+++.++.||+.||.|||++||+||||||+||+++.
T Consensus 65 l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~ 143 (273)
T d1mp8a_ 65 FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 143 (273)
T ss_dssp CCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE
T ss_pred CCCCCEEEEEEEEE-CCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECC
T ss_conf 89999856988995-37479999840698077654224789999999999999987752302267441410265532067
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
.+.+||+|||+++....... .......+++.|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 144 ~~~~Kl~DfG~a~~~~~~~~------~~~~~~~gt~~y~apE~l~----------~~~~~~~~DiwSlGvil~e~lt~g~ 207 (273)
T d1mp8a_ 144 NDCVKLGDFGLSRYMEDSTY------YKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMHGV 207 (273)
T ss_dssp TTEEEECC-------------------------CCGGGCCHHHHH----------HCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCHHHEECCCCCC------EECCCEECCCCCCHHHHHC----------CCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 89678765034213367762------3305400583103266751----------6998874524442478999982699
Q ss_pred CCCCCHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999704799----99936899996468899888999999830029588989999999721
Q 000470 158 PFFELSHLL----AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 158 ~~f~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
+||...... .+..+.. ..++...++.+++||.+||..||++|||+.|+++++.
T Consensus 208 ~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 208 KPFQGVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp CTTTTCCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99888999999999981899---9898777999999999976879768929999999999
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-39 Score=268.77 Aligned_cols=191 Identities=17% Similarity=0.122 Sum_probs=156.4
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC
Q ss_conf 999883201289994895899930667-959889709--99999999999999999999999988984248889979991
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~ 77 (1472)
++||||+++++++. ++..|+||||+. |+|.+++.. .+.+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 69 l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~ 147 (285)
T d1fmka3 69 LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 147 (285)
T ss_dssp CCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCCCEEEEEEEEE-CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEC
T ss_conf 66678868999982-39759999944799435420000355305999999999999999987541143353123079998
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 5990999713664323688999999721220599986423752111237863224579999520478887999999827-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg- 156 (1472)
.++.+||+|||+++...... ........+++.|+|||.+. .+.++.++||||+||++|||++|
T Consensus 148 ~~~~~kl~DfGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDI~S~Giil~el~t~~ 211 (285)
T d1fmka3 148 ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKG 211 (285)
T ss_dssp GGGCEEECCCCTTC--------------------CCGGGSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEECCCCHHHHCCCCC------CEEECCCCCCCCCCCHHHHH----------CCCCCCHHHHHCCHHHHHHHHHCC
T ss_conf 99929984425554256887------33524545566545808983----------799891774132358999998689
Q ss_pred CCCCCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99997047999----99368999964688998889999998300295889899999997
Q 000470 157 VPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 157 ~~~f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
.++|......+ +.++. . ...+...++++++||.+||+.||++||+++++++.
T Consensus 212 ~p~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 267 (285)
T d1fmka3 212 RVPYPGMVNREVLDQVERGY-R--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 267 (285)
T ss_dssp CCSSTTCCHHHHHHHHHTTC-C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCC-C--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99998888999999998268-9--99983237999999999756697589199999998
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-39 Score=269.80 Aligned_cols=199 Identities=18% Similarity=0.111 Sum_probs=161.8
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCC------------------------CCCCHHHHHHHHHHHHHH
Q ss_conf 999883201289994895899930667-9598897099------------------------999999999999999999
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLA 55 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qil~a 55 (1472)
++||||+++++++......|+++||+. |+|.+++..+ ..+++.++..|+.|++.|
T Consensus 73 l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g 152 (301)
T d1lufa_ 73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG 152 (301)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68997655246660598038999815899299999852755421000011100121034678898999999999999998
Q ss_pred HHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999889842488899799915990999713664323688999999721220599986423752111237863224579
Q 000470 56 VKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDA 135 (1472)
Q Consensus 56 L~~lH~~gIvH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~ 135 (1472)
|+|+|++||+||||||+|||++.++.+||+|||+++...... ......+..+++.|+|||.+. ..
T Consensus 153 l~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~ 217 (301)
T d1lufa_ 153 MAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD-----YYKADGNDAIPIRWMPPESIF----------YN 217 (301)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-----CBC----CCBCGGGCCHHHHH----------HC
T ss_pred HHHCCCCCEEEEEECCCCEEECCCCCEEECCCHHHEECCCCC-----CCCCCCCCCCCCCCCCHHHHC----------CC
T ss_conf 554135786854884011689899928983314421136776-----411157777676767989972----------68
Q ss_pred CCCCCCHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999520478887999999827-999970479999936899-996468899888999999830029588989999999721
Q 000470 136 PLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 136 ~~t~~~DIwSlG~vl~el~tg-~~~f~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
.|++++||||+||++|||+++ .+||......+....... .....+...++++.+||.+||+.||++|||+.|+++.+.
T Consensus 218 ~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~ 297 (301)
T d1lufa_ 218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297 (301)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 89805630252362999980689999998999999999739978887325299999999974889657939999999999
Q ss_pred C
Q ss_conf 0
Q 000470 214 A 214 (1472)
Q Consensus 214 ~ 214 (1472)
.
T Consensus 298 ~ 298 (301)
T d1lufa_ 298 R 298 (301)
T ss_dssp H
T ss_pred H
T ss_conf 8
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-38 Score=261.69 Aligned_cols=199 Identities=21% Similarity=0.315 Sum_probs=153.8
Q ss_pred CCCCCCCEEEEEEEE--------CCEEEEEECCCCCCHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Q ss_conf 999883201289994--------89589993066795988-970999999999999999999999999988984248889
Q 000470 1 MSSTPCVHKKFWQET--------DKAAYLLRQYFFNSLRD-RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 71 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~--------~~~~ylV~e~~~gsL~d-~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKp 71 (1472)
++||||+++++++.. +...|+||||+.+.+.. .......+++.+++.++.|++.||.|||++||+||||||
T Consensus 66 l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp 145 (318)
T d3blha1 66 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 145 (318)
T ss_dssp CCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred HCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 35999660676540246544445763899985357874101222034433089999999999999885229988567672
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 97999159909997136643236889999997212205999864237521112378632245799995204788879999
Q 000470 72 ENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 151 (1472)
Q Consensus 72 eNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~ 151 (1472)
+|||++.++.++|+|||+++......... .....+..|++.|+|||.+.. ...++.++||||+||++|
T Consensus 146 ~NILl~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~gT~~Y~aPE~~~~---------~~~~~~k~DiwSlGvil~ 213 (318)
T d3blha1 146 ANVLITRDGVLKLADFGLARAFSLAKNSQ---PNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDLWGAGCIMA 213 (318)
T ss_dssp GGEEECTTSCEEECCCTTCEECCC--------CCCCCSCCSCGGGCCHHHHTT---------CSSCCTHHHHHHHHHHHH
T ss_pred HHEEECCCCCEEEEECCEEEECCCCCCCC---CCCCCCEECCHHHHHHHHHCC---------CCCCCCHHHCCCCCCEEE
T ss_conf 22036689968763135002235544432---113566024978742899707---------999891787006786466
Q ss_pred HHHHCCCCCCCHHHHH----HHH--CCCCCCC--CCC------------------------CCCCHHHHHHHHHHCCCCC
Q ss_conf 9982799997047999----993--6899996--468------------------------8998889999998300295
Q 000470 152 ELFLEVPFFELSHLLA----YRR--GQYDPSQ--HLE------------------------KIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 152 el~tg~~~f~~~~~~~----~~~--~~~~~~~--~l~------------------------~~~~~~l~~lI~~mL~~dP 199 (1472)
||++|++||....... +.+ +...+.. ... ...++.+++||.+||+.||
T Consensus 214 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP 293 (318)
T d3blha1 214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 293 (318)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSST
T ss_pred EHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCH
T ss_conf 17448799899899999999998418998255344320344433201334455503340444599899999999873896
Q ss_pred CCCCCHHHHHHH
Q ss_conf 889899999997
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~R~sa~e~L~~ 211 (1472)
++|+||+|+|+|
T Consensus 294 ~~R~sa~elL~H 305 (318)
T d3blha1 294 AQRIDSDDALNH 305 (318)
T ss_dssp TTSCCHHHHHHS
T ss_pred HHCCCHHHHHCC
T ss_conf 589099999749
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-39 Score=267.27 Aligned_cols=197 Identities=23% Similarity=0.295 Sum_probs=154.1
Q ss_pred CCCCCCCEEEEEEEECC-----EEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 99988320128999489-----5899930667959889709999999999999999999999999889842488899799
Q 000470 1 MSSTPCVHKKFWQETDK-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 75 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~-----~~ylV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNIL 75 (1472)
|+||||+++++++..+. ..|++++++.|+|++++..+ .+++.+++.++.|++.||+|||++||+||||||+|||
T Consensus 63 l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NIL 141 (345)
T d1pmea_ 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 141 (345)
T ss_dssp CCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 689898858889950564554149999962598656644058-9999999999999999999999789867778764378
Q ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 91599099971366432368899999972122059998642375211123786322457999952047888799999982
Q 000470 76 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 76 v~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t 155 (1472)
++..+.+||+|||+++........ ........+++.|+|||.+.. ...++.++||||+||++|||++
T Consensus 142 l~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~---------~~~~~~~~DiwSlG~il~eml~ 208 (345)
T d1pmea_ 142 LNTTCDLKICDFGLARVADPDHDH----TGFLTEYVATRWYRAPEIMLN---------SKGYTKSIDIWSVGCILAEMLS 208 (345)
T ss_dssp ECTTCCEEECCCTTCEECCGGGCB----CCTTCCCCSCGGGCCGGGTTT---------BCSCSTHHHHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCCCCEEECCCCCCC----CEEECCCCCCCEECHHHHHHC---------CCCCCCHHHHHCCCCEEHHHHH
T ss_conf 879997787545705650477764----101011026520003878604---------7888741010046701337766
Q ss_pred CCCCCCCHHHHH----HHH-----------------------CCCC----CCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 799997047999----993-----------------------6899----996468899888999999830029588989
Q 000470 156 EVPFFELSHLLA----YRR-----------------------GQYD----PSQHLEKIPDSGIRKMILHMIQLEPELRFS 204 (1472)
Q Consensus 156 g~~~f~~~~~~~----~~~-----------------------~~~~----~~~~l~~~~~~~l~~lI~~mL~~dP~~R~s 204 (1472)
|++||....... ... .... +...+....++++++||.+||+.||++|||
T Consensus 209 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t 288 (345)
T d1pmea_ 209 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 288 (345)
T ss_dssp SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf 97997888889999987652069975664234332222024467755778777837899999999999976489567908
Q ss_pred HHHHHHH
Q ss_conf 9999997
Q 000470 205 AESYLQN 211 (1472)
Q Consensus 205 a~e~L~~ 211 (1472)
|+|+|+|
T Consensus 289 a~e~L~h 295 (345)
T d1pmea_ 289 VEQALAH 295 (345)
T ss_dssp HHHHHTS
T ss_pred HHHHHCC
T ss_conf 9998619
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-39 Score=267.25 Aligned_cols=195 Identities=20% Similarity=0.222 Sum_probs=161.9
Q ss_pred CCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC
Q ss_conf 9883201289994895899930667-959889709999999999999999999999999889842488899799915990
Q 000470 3 STPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 81 (1472)
Q Consensus 3 hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~~~ 81 (1472)
||||+++++++++....|+++||+. |+|.+++...+.+.+..++.++.||+.||+|+|++||+||||||+|||++.++.
T Consensus 88 ~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~ 167 (322)
T d1vzoa_ 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH 167 (322)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCC
T ss_conf 98399962000248730012312341179999873045437888888999999998851499896547732012469998
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99971366432368899999972122059998642375211123786322457999952047888799999982799997
Q 000470 82 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 161 (1472)
Q Consensus 82 vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~~~f~ 161 (1472)
++|+|||+++...... .....+..|++.|+|||.+... ...++.++||||+||++|||++|.+||.
T Consensus 168 vkL~DFG~a~~~~~~~------~~~~~~~~g~~~~~~pe~~~~~--------~~~~~~ksDIWSlG~iLyelltG~~PF~ 233 (322)
T d1vzoa_ 168 VVLTDFGLSKEFVADE------TERAYDFCGTIEYMAPDIVRGG--------DSGHDKAVDWWSLGVLMYELLTGASPFT 233 (322)
T ss_dssp EEESCSSEEEECCGGG------GGGGCGGGSCCTTCCHHHHTTC--------C---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred EEEEECCCHHHHCCCC------CCCCCCCCCCCCCCHHHHHHCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8874132022203444------4322122233333106876057--------7688713251777799999976899988
Q ss_pred CH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 04----7999993689999646889988899999983002958898-----99999997
Q 000470 162 LS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 211 (1472)
Q Consensus 162 ~~----~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 211 (1472)
.. ....+.++.......++...++++++||.+||+.||++|+ +++|+++|
T Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 234 VDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp CTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCC
T ss_conf 88777799999983356899886547999999999974458988199974509999749
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-38 Score=261.91 Aligned_cols=199 Identities=14% Similarity=0.146 Sum_probs=159.4
Q ss_pred CCCCCCCEEEEEEEE-CCEEEEEECCCC-CCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC
Q ss_conf 999883201289994-895899930667-9598897099-9999999999999999999999988984248889979991
Q 000470 1 MSSTPCVHKKFWQET-DKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 77 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~-~~~~ylV~e~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~ 77 (1472)
|+||||+++++++.. +...|+||||++ |+|.+++..+ ..+++.++..++.|++.||.|+|+++|+||||||+|||++
T Consensus 85 l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~ 164 (311)
T d1r0pa_ 85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 164 (311)
T ss_dssp CCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEC
T ss_conf 78999867867898069943899987406741442101345404899999999988765200336762577668757677
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 5990999713664323688999999721220599986423752111237863224579999520478887999999827-
Q 000470 78 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE- 156 (1472)
Q Consensus 78 ~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg- 156 (1472)
+.+.+||+|||+++......... ........|+..|+|||.+. ...++.++||||+||++|||+++
T Consensus 165 ~~~~~kL~DFG~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDI~SfGivl~El~t~~ 231 (311)
T d1r0pa_ 165 EKFTVKVADFGLARDMYDKEFDS---VHNKTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRG 231 (311)
T ss_dssp TTCCEEECSSGGGCCTTTTTCCC---TTCTTCSSCCGGGSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEECCCCHHHCCCCCCCC---CEECCCCCCCCCCCCHHHHH----------CCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 99988991065232255665553---10025655564556768874----------379997457466199999999789
Q ss_pred CCCCCCHHHHH----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99997047999----993689999646889988899999983002958898999999972101
Q 000470 157 VPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 215 (1472)
Q Consensus 157 ~~~f~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~~ 215 (1472)
.||+....... ...+. ....+...++++.+||.+||+.||++||++.|+++++...
T Consensus 232 ~p~~~~~~~~~~~~~i~~g~---~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i 291 (311)
T d1r0pa_ 232 APPYPDVNTFDITVYLLQGR---RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291 (311)
T ss_dssp CCSCC------CHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
T ss_conf 99988899999999998089---8899644759999999997688976893999999999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-38 Score=262.88 Aligned_cols=195 Identities=13% Similarity=0.122 Sum_probs=160.0
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCC------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99883201289994895899930667-9598897099------------------9999999999999999999999988
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------PFLSLVEKKWLAFQLLLAVKQCHEK 62 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~------------------~~l~~~~~~~i~~Qil~aL~~lH~~ 62 (1472)
+||||++++++++++...|+||||++ |+|.+++... ..+++.+++.++.||+.||+|||++
T Consensus 85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~ 164 (311)
T d1t46a_ 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164 (311)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99988789989831997899997379987999998535665444445332223345889999999999999999988757
Q ss_pred CCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 98424888997999159909997136643236889999997212205999864237521112378632245799995204
Q 000470 63 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMD 142 (1472)
Q Consensus 63 gIvH~DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~D 142 (1472)
|++||||||+||+++..+.++++|||.++...... .....+...+++.|+|||.+. ...++.++|
T Consensus 165 ~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~D 229 (311)
T d1t46a_ 165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NYVVKGNARLPVKWMAPESIF----------NCVYTFESD 229 (311)
T ss_dssp TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT-----TSEECSSSEECGGGCCHHHHH----------HCCCCHHHH
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCHHEECCCCC-----CCEEEEECCCCHHHCCHHHHC----------CCCCCCCCC
T ss_conf 92666241021000025752102340102336788-----615862013596876778861----------799997400
Q ss_pred HHHHHHHHHHHHH-CCCCCCCH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 7888799999982-79999704----79999936899996468899888999999830029588989999999721
Q 000470 143 IFAVGCVIAELFL-EVPFFELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 143 IwSlG~vl~el~t-g~~~f~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
|||+||++|||++ |.|+|... ....+......+ ..+...++.+++||.+||+.||++|||++++++.+.
T Consensus 230 IwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~ 303 (311)
T d1t46a_ 230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (311)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 10258999999858998877899899999998668988--985436599999999975779657929999999998
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-39 Score=264.83 Aligned_cols=195 Identities=14% Similarity=0.099 Sum_probs=158.3
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 999883201289994895899930667-959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
+.||||+++++++++ ...|+|+||+. |+|.+++.. .+.+++.+++.++.|++.||.|||++||+||||||+|||++.
T Consensus 68 l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~ 146 (273)
T d1u46a_ 68 LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146 (273)
T ss_dssp CCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE
T ss_pred CCCCCEEEEEEEEEE-CCHHEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCC
T ss_conf 899998789877740-1001146542386125444212689999999999999999998752178752056688815655
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC
Q ss_conf 99099971366432368899999972122059998642375211123786322457999952047888799999982-79
Q 000470 79 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 157 (1472)
Q Consensus 79 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t-g~ 157 (1472)
++.+||+|||+++....... ........+++..|+|||.+. ...++.++||||+||++|||++ |.
T Consensus 147 ~~~vkl~DfGl~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~S~Gvil~emlt~G~ 212 (273)
T d1u46a_ 147 RDLVKIGDFGLMRALPQNDD----HYVMQEHRKVPFAWCAPESLK----------TRTFSHASDTWMFGVTLWEMFTYGQ 212 (273)
T ss_dssp TTEEEECCCTTCEECCC-CC----EEEC-----CCGGGCCHHHHH----------HCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCHHHHHCCCCCC----CCEECCCCCCCCCCCCHHHHH----------CCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 65433256115553035887----526547632573107999983----------7999942156614899999996899
Q ss_pred CCCCCHHHHHH----HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 99970479999----93689999646889988899999983002958898999999972
Q 000470 158 PFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 212 (1472)
Q Consensus 158 ~~f~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 212 (1472)
+||......+. .+.... ...+...++.+++||.+||+.||++|||+.++++-+
T Consensus 213 ~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L 269 (273)
T d1u46a_ 213 EPWIGLNGSQILHKIDKEGER--LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269 (273)
T ss_dssp CTTTTCCHHHHHHHHHTSCCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf 999996999999999847999--998544539999999997688966792999999999
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-39 Score=265.66 Aligned_cols=193 Identities=18% Similarity=0.159 Sum_probs=157.9
Q ss_pred CCCCCCCEEEEEE-EECCEEEEEECCCC-CCHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf 9998832012899-94895899930667-95988970999--99999999999999999999998898424888997999
Q 000470 1 MSSTPCVHKKFWQ-ETDKAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 76 (1472)
Q Consensus 1 l~hpNIv~~~~~~-~~~~~~ylV~e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv 76 (1472)
++||||+++++++ +.+...|+|+||++ |+|.+++..+. .+++..++.++.||+.||.|||+++|+||||||+|||+
T Consensus 57 l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~ 136 (262)
T d1byga_ 57 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 136 (262)
T ss_dssp CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEE
T ss_conf 78989854987887238928999963699989999874578888999999999999852321133765536665676014
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q ss_conf 1599099971366432368899999972122059998642375211123786322457999952047888799999982-
Q 000470 77 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 155 (1472)
Q Consensus 77 ~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t- 155 (1472)
+.++.++|+|||.++..... ..+..++..|+|||.+. +..+++++||||+||++|||++
T Consensus 137 ~~~~~~kl~dfg~s~~~~~~----------~~~~~~~~~y~aPE~l~----------~~~~t~~sDIwSfG~il~el~t~ 196 (262)
T d1byga_ 137 SEDNVAKVSDFGLTKEASST----------QDTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSF 196 (262)
T ss_dssp CTTSCEEECCCCC----------------------CCTTTSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCCCCEECCCC----------CCCCCCCCCCCCHHHHH----------CCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 68997763245600344787----------76556664677817872----------79888588777579999999978
Q ss_pred CCCCCCCHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 79999704799999368-99996468899888999999830029588989999999721
Q 000470 156 EVPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 213 (1472)
Q Consensus 156 g~~~f~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 213 (1472)
|.+||............ ....+.++...++++++||.+||+.||++|||+.++++++.
T Consensus 197 ~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~ 255 (262)
T d1byga_ 197 GRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255 (262)
T ss_dssp SCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99999999999999999808999997657999999999975669768939999999999
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=257.07 Aligned_cols=195 Identities=23% Similarity=0.266 Sum_probs=156.2
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 999883201289994895899930667-9598897099999999999999999999999998898424888997999159
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 79 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~ 79 (1472)
++||||++++.++......|++++++. ++|..++...+.+++.+++.++.|++.||+|||++||+||||||+|||++..
T Consensus 58 l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~ 137 (292)
T d1unla_ 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN 137 (292)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred CCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
T ss_conf 67578882135444443115886302332221121235654036789999999999877433998600146761211337
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CC
Q ss_conf 90999713664323688999999721220599986423752111237863224579999520478887999999827-99
Q 000470 80 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 158 (1472)
Q Consensus 80 ~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg-~~ 158 (1472)
+.+||+|||.++....+... .....++..|.|||.+.. ...++.++||||+||++|||++| .|
T Consensus 138 ~~~kl~DFG~a~~~~~~~~~-------~~~~~~~~~~~~pe~~~~---------~~~~~~~~DiwSlG~il~ell~g~~p 201 (292)
T d1unla_ 138 GELKLANFGLARAFGIPVRC-------YSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_dssp CCEEECCCTTCEECCSCCSC-------CCSCCSCGGGCCHHHHTT---------CSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred CCEEEEECCHHHCCCCCCCC-------CEEECCCCCHHHHHHHCC---------CCCCCCHHHCCCCCHHHHHHHHCCCC
T ss_conf 82665204601104688751-------001034431014667506---------98888044402654188998518999
Q ss_pred CCCCHHHHH----HHHCCCC-------------------------CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 997047999----9936899-------------------------99646889988899999983002958898999999
Q 000470 159 FFELSHLLA----YRRGQYD-------------------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 209 (1472)
Q Consensus 159 ~f~~~~~~~----~~~~~~~-------------------------~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L 209 (1472)
+|....... +...... .........++.+++||.+||+.||++||||+|+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L 281 (292)
T d1unla_ 202 LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp SCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 98899999999999861189973551344322211334445443104330656899999999998649966890999996
Q ss_pred HH
Q ss_conf 97
Q 000470 210 QN 211 (1472)
Q Consensus 210 ~~ 211 (1472)
+|
T Consensus 282 ~H 283 (292)
T d1unla_ 282 QH 283 (292)
T ss_dssp TS
T ss_pred CC
T ss_conf 49
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.5e-34 Score=237.05 Aligned_cols=261 Identities=11% Similarity=0.094 Sum_probs=207.2
Q ss_pred CCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 8555-653634511234555589990799799999299979999399886442111105874169732799992499799
Q 000470 1043 GWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1043 ~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~l 1121 (1472)
.|+. .+..+..+.+|.+.|++++|+|++++||+|+.||+|+|||+...+.. ....+..|.++|.+++|+++++.+
T Consensus 42 i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~----~~~~~~~~~~~v~~v~~s~d~~~l 117 (311)
T d1nr0a1 42 TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI----LKTTIPVFSGPVKDISWDSESKRI 117 (311)
T ss_dssp EEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC----EEEEEECSSSCEEEEEECTTSCEE
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEECCCCC----CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999661797478888899999489996722556736746631011110----000134335754332333111000
Q ss_pred EEEEC--CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99917--9949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1122 VVGAC--DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1122 as~s~--DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
++++. +..+++|++++.. .... ...+...+..+.|+|++ ...+++++.||.|++||+++++.
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~-------------~~~~-l~~h~~~v~~v~~~~~~--~~~l~sgs~d~~i~i~d~~~~~~ 181 (311)
T d1nr0a1 118 AAVGEGRERFGHVFLFDTGT-------------SNGN-LTGQARAMNSVDFKPSR--PFRIISGSDDNTVAIFEGPPFKF 181 (311)
T ss_dssp EEEECCSSCSEEEEETTTCC-------------BCBC-CCCCSSCEEEEEECSSS--SCEEEEEETTSCEEEEETTTBEE
T ss_pred CCCCCCCCCCCCCCCCCCCC-------------CCCC-CCCCCCCCCCCCCCCCC--EEEECCCCCCCCCCCCCCCCCCC
T ss_conf 11112211111111111111-------------1111-11111111111112111--01200011221111111111111
Q ss_pred CCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC------CCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 54000478766538999969998999993799399997899951006741------566772047842599997444689
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY------SQVCPIEKMCLFVPPPNAAVSTTA 1273 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~------~~~~~I~~l~~~~p~~~~~~~s~~ 1273 (1472)
...+.. |...|++++++|+++++++|+.||.+.+||++.+..+..+.. .|..+|.++.+ +|++.
T Consensus 182 ~~~~~~--~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-s~~~~------- 251 (311)
T d1nr0a1 182 KSTFGE--HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW-SPDGT------- 251 (311)
T ss_dssp EEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE-CTTSS-------
T ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC-------
T ss_conf 111111--11111112347642212111111111000124464112221111111002465321024-78899-------
Q ss_pred CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99799998699499998688717789861358898766877632358898899975332344533222344899988678
Q 000470 1274 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1353 (1472)
Q Consensus 1274 ~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1353 (1472)
++++++.|+.|.+||++++++.+.+..... ....
T Consensus 252 --~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~--------------------------------------------~~~~ 285 (311)
T d1nr0a1 252 --KIASASADKTIKIWNVATLKVEKTIPVGTR--------------------------------------------IEDQ 285 (311)
T ss_dssp --EEEEEETTSEEEEEETTTTEEEEEEECCSS--------------------------------------------GGGC
T ss_pred --EEEEEECCCEEEEEECCCCCEEEEEECCCC--------------------------------------------CCCE
T ss_conf --999993799699999999969999979998--------------------------------------------6332
Q ss_pred CEEECCCCCCCEEECCCCCEEEEEECC
Q ss_conf 158344899918981699909997399
Q 000470 1354 IRSLLPLPGGDLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1354 V~sl~~~p~g~LiTgg~Dg~IriWDl~ 1380 (1472)
+.++.|.++ .+++++.||.|++||.+
T Consensus 286 ~~~~~~~~~-~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 286 QLGIIWTKQ-ALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEEECSS-CEEEEETTCCEEEEETT
T ss_pred EEEEEECCC-EEEEEECCCEEEEEECC
T ss_conf 999995199-99999899979999588
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-38 Score=261.44 Aligned_cols=191 Identities=21% Similarity=0.300 Sum_probs=151.7
Q ss_pred CCCCCCCEEEEEEEE------CCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
Q ss_conf 999883201289994------89589993066795988970999999999999999999999999988984248889979
Q 000470 1 MSSTPCVHKKFWQET------DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~------~~~~ylV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNI 74 (1472)
++||||+++++++.. ....|+||||+.|++.+.+.. .+++.+++.+++||+.||.|||++||+||||||+||
T Consensus 73 l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~--~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Ni 150 (355)
T d2b1pa1 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150 (355)
T ss_dssp CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred CCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 489876489989702564345762699984144677876503--899999999999999999886522112456776321
Q ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99159909997136643236889999997212205999864237521112378632245799995204788879999998
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~ 154 (1472)
|++.++.++++|||.++...... ......+++.|+|||.+. +..+++++||||+||+++||+
T Consensus 151 l~~~~~~~kl~df~~~~~~~~~~--------~~~~~~~t~~y~aPE~l~----------~~~~~~~~DiwSlG~~l~ell 212 (355)
T d2b1pa1 151 VVKSDCTLKILDFGLARTAGTSF--------MMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMV 212 (355)
T ss_dssp EECTTCCEEECCCCC-----------------------CCTTCCHHHHT----------TCCCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECHHHHHCCCCCC--------CCCCCCCCCCCCCHHHHC----------CCCCCCCCCCCCCCCHHHHHH
T ss_conf 13654431320102321146665--------533221465555813314----------777787743335662578986
Q ss_pred HCCCCCCCHHHHH----H----------------------HHCCCCC-CCC---------------CCCCCCHHHHHHHH
Q ss_conf 2799997047999----9----------------------9368999-964---------------68899888999999
Q 000470 155 LEVPFFELSHLLA----Y----------------------RRGQYDP-SQH---------------LEKIPDSGIRKMIL 192 (1472)
Q Consensus 155 tg~~~f~~~~~~~----~----------------------~~~~~~~-~~~---------------l~~~~~~~l~~lI~ 192 (1472)
+|++||....... + ....... ... .....++++++||.
T Consensus 213 ~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 292 (355)
T d2b1pa1 213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292 (355)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 59899888977889999997205898799987656677776417543566642126433354321013337999999999
Q ss_pred HHCCCCCCCCCCHHHHHHH
Q ss_conf 8300295889899999997
Q 000470 193 HMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 193 ~mL~~dP~~R~sa~e~L~~ 211 (1472)
+||+.||++||||+|+|+|
T Consensus 293 ~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 293 KMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHSCSSTTTSCCHHHHHTS
T ss_pred HHCCCCHHHCCCHHHHHCC
T ss_conf 9876994579089999669
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-38 Score=260.57 Aligned_cols=204 Identities=13% Similarity=0.082 Sum_probs=163.7
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCC-CCHHHHHHC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf 999883201289994895899930667-959889709----------999999999999999999999999889842488
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFF-NSLRDRLST----------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDI 69 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~-gsL~d~l~~----------~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DI 69 (1472)
++||||+++++++..+...|+|+||+. |+|.+++.. ...+++..+..++.|++.||.|||+++|+||||
T Consensus 80 l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDl 159 (308)
T d1p4oa_ 80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 159 (308)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred CCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEE
T ss_conf 69998841254784288106777604899889998750332113444688799999999999999999876479654328
Q ss_pred CCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 89979991599099971366432368899999972122059998642375211123786322457999952047888799
Q 000470 70 KCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 149 (1472)
Q Consensus 70 KpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~v 149 (1472)
||+|||++.++.+||+|||+++...... .........+++.|+|||.+. +..++.++||||+||+
T Consensus 160 k~~NiLld~~~~~Kl~DFGla~~~~~~~-----~~~~~~~~~~t~~y~aPe~l~----------~~~~~~~~Dv~S~G~i 224 (308)
T d1p4oa_ 160 AARNCMVAEDFTVKIGDFGMTRDIYETD-----YYRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVV 224 (308)
T ss_dssp SGGGEEECTTCCEEECCTTCCCGGGGGG-----CEEGGGSSEECGGGCCHHHHH----------HCCCCHHHHHHHHHHH
T ss_pred CCCCEEECCCCEEEEEECCCCEECCCCC-----CEEECCCEECCCCCCCHHHHC----------CCCCCCCCCCCCHHHH
T ss_conf 6775403599649994245420235776-----303134023163237888873----------6998833344437899
Q ss_pred HHHHHHC-CCCCCCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 9999827-999970479999936899-996468899888999999830029588989999999721012999
Q 000470 150 IAELFLE-VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT 219 (1472)
Q Consensus 150 l~el~tg-~~~f~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~~~fp~ 219 (1472)
+|||+++ .+||......+......+ .....+...++.++++|.+||+.||++|||+++++++++...-|.
T Consensus 225 l~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~ 296 (308)
T d1p4oa_ 225 LWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296 (308)
T ss_dssp HHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCC
T ss_conf 999996899999998999999999808888886335399999999975779658939999999978761778
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-34 Score=235.36 Aligned_cols=308 Identities=18% Similarity=0.227 Sum_probs=218.3
Q ss_pred CC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEE
Q ss_conf 55-56536345112345555899907997999992999799993998864421111058741697327999924997999
Q 000470 1044 WR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVV 1122 (1472)
Q Consensus 1044 W~-p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~la 1122 (1472)
|+ ...++.+.|+||+++|.+ +++++|++|||||.||+|+|||+.+++ ...++.+|.+.|.+++|.+ +.++
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~------~~~~~~~h~~~V~~v~~~~--~~l~ 71 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK------CLRTLVGHTGGVWSSQMRD--NIII 71 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC------EEEECCCCSSCEEEEEEET--TEEE
T ss_pred CCCCCCCCCEEECCCCCCEEE-EEEECCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEECC--CCCC
T ss_conf 989988758898886875099-999789999999189909999899997------9999948899989999479--8632
Q ss_pred EEECCCCEEEEECCCCCCCCC------CCCCC----------CCCCCCEEECCCCCCEEEEE--------EECCCCCCCE
Q ss_conf 991799499998011246888------64334----------68545233027998589999--------7137998721
Q 000470 1123 VGACDGIIHMFSVDHISRGLG------NVEKY----------SGISDIKKKDTKEGAIVTLV--------NYNTDNCASH 1178 (1472)
Q Consensus 1123 s~s~DG~I~iwdi~~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~v~~~--------~~~~d~~s~~ 1178 (1472)
+++.||.+++|+......... ..... .....+..++...+...... ..... ..
T Consensus 72 s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 148 (342)
T d2ovrb2 72 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD---GR 148 (342)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC---SS
T ss_pred CCEECCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCC---CC
T ss_conf 100000111111110000000123330476520246522123444037874035563001110011110000013---33
Q ss_pred EEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEE
Q ss_conf 99999589749999599898654000478766538999969998999993799399997899951006741566772047
Q 000470 1179 MFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM 1258 (1472)
Q Consensus 1179 ~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l 1258 (1472)
.++.++.++.|++||.+.......+.. |...+..+. +++..+++|+.||.|++||++...++..+.. +...+..+
T Consensus 149 ~~~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~-~~~~v~~~ 223 (342)
T d2ovrb2 149 RVVSGAYDFMVKVWDPETETCLHTLQG--HTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGM 223 (342)
T ss_dssp CEEEEETTSCEEEEEGGGTEEEEEECC--CSSCEEEEE--ECSSEEEEEETTSCEEEEETTTCCEEEEECC-CCSCEEEE
T ss_pred EEEEECCCCEEEEEECCCCEEEEEECC--CCCCCCCCC--CCCCEEEEEECCCEEEEEECCCCEEEEEECC-CCCCEEEE
T ss_conf 024335898699952523436678727--544421006--8999999995899399952556536567416-65320577
Q ss_pred EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 84259999744468999799998699499998688717789861358898766877632358898899975332344533
Q 000470 1259 CLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1338 (1472)
Q Consensus 1259 ~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1338 (1472)
.+ .+ .++++++.++.|.+||+...+....+....
T Consensus 224 ~~-~~-----------~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---------------------------------- 257 (342)
T d2ovrb2 224 EL-KD-----------NILVSGNADSTVKIWDIKTGQCLQTLQGPN---------------------------------- 257 (342)
T ss_dssp EE-ET-----------TEEEEEETTSCEEEEETTTCCEEEEECSTT----------------------------------
T ss_pred EC-CC-----------CEEEEECCCCEEEEEECCCCCCCCCCCCCC----------------------------------
T ss_conf 06-89-----------999997489889998655442211122100----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEC
Q ss_conf 22234489998867815834489991898169990999739999996497189988999984067860586199995405
Q 000470 1339 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKR 1418 (1472)
Q Consensus 1339 ~~~~~l~~~~~~~~~V~sl~~~p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~ 1418 (1472)
.|...+.++.+++ ..+++|+.||.|++||+.+++..+.+....
T Consensus 258 ----------~~~~~~~~~~~~~-~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~-------------------------- 300 (342)
T d2ovrb2 258 ----------KHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNLVTLE-------------------------- 300 (342)
T ss_dssp ----------SCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEEECT--------------------------
T ss_pred ----------EEEECEEECCCCC-CEEEEECCCCEEEEEECCCCCEEEEEECCC--------------------------
T ss_conf ----------0110100001379-844999089989999999997989986234--------------------------
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCE----EEECC
Q ss_conf 8864012467887542017778875304587522069828999808943----89839
Q 000470 1419 QPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGA----IKVWK 1472 (1472)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~----IkVWk 1472 (1472)
..+|...|++++ |++++.++++|++||+ |++|+
T Consensus 301 --------------------~~~~~~~v~~v~-~s~~~~~la~g~~dGt~~~~l~~~D 337 (342)
T d2ovrb2 301 --------------------SGGSGGVVWRIR-ASNTKLVCAVGSRNGTEETKLLVLD 337 (342)
T ss_dssp --------------------TGGGTCEEEEEE-ECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred --------------------CCCCCCCEEEEE-ECCCCCEEEEEECCCCCEEEEEEEE
T ss_conf --------------------789889789999-8799989999968999704899993
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.1e-34 Score=233.67 Aligned_cols=30 Identities=23% Similarity=0.182 Sum_probs=24.9
Q ss_pred CCCCCCEEEEEEEECCCCEEEEECCCCEEEEC
Q ss_conf 88753045875220698289998089438983
Q 000470 1440 GCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1471 (1472)
Q Consensus 1440 ~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVW 1471 (1472)
.+|.+.|++++ |+++ .+++++++||.++||
T Consensus 321 ~~~~~~V~~v~-~~~~-~~~~~~s~dg~~~l~ 350 (355)
T d1nexb2 321 LKDADQIWSVN-FKGK-TLVAAVEKDGQSFLE 350 (355)
T ss_dssp TTTCSEEEEEE-EETT-EEEEEEESSSCEEEE
T ss_pred CCCCCCEEEEE-ECCC-EEEEEEECCCCEEEE
T ss_conf 58999899999-8399-199999898909999
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.9e-37 Score=254.81 Aligned_cols=190 Identities=15% Similarity=0.247 Sum_probs=147.2
Q ss_pred CCCCCCEEEEEEEE--CCEEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 99883201289994--895899930667-959889709999999999999999999999999889842488899799915
Q 000470 2 SSTPCVHKKFWQET--DKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~--~~~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
+||||++++++++. .+..|+||||+. ++|.+.. ..+++.+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 88 ~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~ 164 (328)
T d3bqca1 88 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 164 (328)
T ss_dssp TSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred CCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
T ss_conf 799876799999816877126888631798589974---68999999999999999998876433443456441237748
Q ss_pred CC-CEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99-09997136643236889999997212205999864237521112378632245799995204788879999998279
Q 000470 79 WN-WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 157 (1472)
Q Consensus 79 ~~-~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~tg~ 157 (1472)
.+ .++|+|||.++...... ......+++.|+|||.+.. ...++.++||||+||+++||++|.
T Consensus 165 ~~~~vkl~DFG~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~e~~~g~ 227 (328)
T d3bqca1 165 EHRKLRLIDWGLAEFYHPGQ--------EYNVRVASRYFKGPELLVD---------YQMYDYSLDMWSLGCMLASMIFRK 227 (328)
T ss_dssp TTTEEEECCGGGCEECCTTC--------CCCSCCSCGGGCCHHHHTT---------CCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEECCCCCCEECCCCC--------CCCCCCCCCCCCCCCCCCC---------CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 99836641565426646887--------4443224864247610268---------888884523233545558760488
Q ss_pred CCCCCHH-----HHHH-------------HHCCCCC--------------------CCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 9997047-----9999-------------9368999--------------------964688998889999998300295
Q 000470 158 PFFELSH-----LLAY-------------RRGQYDP--------------------SQHLEKIPDSGIRKMILHMIQLEP 199 (1472)
Q Consensus 158 ~~f~~~~-----~~~~-------------~~~~~~~--------------------~~~l~~~~~~~l~~lI~~mL~~dP 199 (1472)
+||.... ...+ ....... ........++++++||.+||+.||
T Consensus 228 ~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP 307 (328)
T d3bqca1 228 EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 307 (328)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSG
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCH
T ss_conf 99988760189999999987884155555422544474300000333433112115521124489999999999866995
Q ss_pred CCCCCHHHHHHH
Q ss_conf 889899999997
Q 000470 200 ELRFSAESYLQN 211 (1472)
Q Consensus 200 ~~R~sa~e~L~~ 211 (1472)
++|+|++|+|+|
T Consensus 308 ~~R~ta~e~L~H 319 (328)
T d3bqca1 308 QSRLTAREAMEH 319 (328)
T ss_dssp GGSCCHHHHHTS
T ss_pred HHCCCHHHHHCC
T ss_conf 689089999649
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-37 Score=256.14 Aligned_cols=203 Identities=17% Similarity=0.155 Sum_probs=154.2
Q ss_pred CCCCCCCEEEEEEEECC----EEEEEECCCC-CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEEC
Q ss_conf 99988320128999489----5899930667-9598897099999999999999999999999998--------898424
Q 000470 1 MSSTPCVHKKFWQETDK----AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE--------KGICHG 67 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~----~~ylV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~--------~gIvH~ 67 (1472)
++||||+++++++.++. ..|+||||++ |+|.+++.+.+ +++.+...++.|++.||.|+|+ +||+||
T Consensus 54 ~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHr 132 (303)
T d1vjya_ 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132 (303)
T ss_dssp CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 7998683268899837986048999996466989899986589-998999999999999999988766520468986615
Q ss_pred CCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 88899799915990999713664323688999999721220599986423752111237863224579999520478887
Q 000470 68 DIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 147 (1472)
Q Consensus 68 DIKpeNILv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 147 (1472)
||||+|||++.++.+||+|||+++......+. .........|++.|+|||.+..... .....++.++||||+|
T Consensus 133 DlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~k~Di~S~G 205 (303)
T d1vjya_ 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSIN----MKHFESFKRADIYAMG 205 (303)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEEEETTTTE---ECC----CCSCGGGCCHHHHTTCSC----TTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEECCCCCEEEEECCCCCCCCCCCCC---EECCCCCEECCCCCCCHHHCCCCCC----CCCCCCCCCHHHHHHH
T ss_conf 31731357868877688763866234677762---0013552503547678221056545----4677767501220159
Q ss_pred HHHHHHHHCCCCCCCH---------------HHHHHHH----CCCCCCCCCCCC-----CCHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999998279999704---------------7999993----689999646889-----988899999983002958898
Q 000470 148 CVIAELFLEVPFFELS---------------HLLAYRR----GQYDPSQHLEKI-----PDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 148 ~vl~el~tg~~~f~~~---------------~~~~~~~----~~~~~~~~l~~~-----~~~~l~~lI~~mL~~dP~~R~ 203 (1472)
|++|||++|.+||... ....... ....+ .++.. ....+.+|+.+||+.||++||
T Consensus 206 vvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 283 (303)
T d1vjya_ 206 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP--NIPNRWQSCEALRVMAKIMRECWYANGAARL 283 (303)
T ss_dssp HHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC--CCCGGGGGCHHHHHHHHHHHTTCCSSGGGSC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 99999962899887663112410122556430999999875024688--8776557768999999999997606985895
Q ss_pred CHHHHHHHHH
Q ss_conf 9999999721
Q 000470 204 SAESYLQNYA 213 (1472)
Q Consensus 204 sa~e~L~~~~ 213 (1472)
|+.|+++++.
T Consensus 284 s~~ei~~~L~ 293 (303)
T d1vjya_ 284 TALRIKKTLS 293 (303)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 9999999999
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-38 Score=259.12 Aligned_cols=191 Identities=21% Similarity=0.220 Sum_probs=148.8
Q ss_pred CCCCCCCEEEEEEEEC------CEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
Q ss_conf 9998832012899948------9589993066795988970999999999999999999999999988984248889979
Q 000470 1 MSSTPCVHKKFWQETD------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 74 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~------~~~ylV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNI 74 (1472)
|+||||+++++++... ...|+++++..|+|++++..+ .+++.+++.++.||+.||+|||++||+||||||+||
T Consensus 74 l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NI 152 (348)
T d2gfsa1 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152 (348)
T ss_dssp CCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred CCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 6898742599999634645668649999962588623200224-530999999999999999999738876516677633
Q ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99159909997136643236889999997212205999864237521112378632245799995204788879999998
Q 000470 75 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 154 (1472)
Q Consensus 75 Lv~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~ 154 (1472)
|++.++.++++|||.+..... ...+..|++.|+|||.+.. ...++.++||||+||++|+|+
T Consensus 153 Li~~~~~~kl~dfg~a~~~~~----------~~~~~~g~~~y~apE~~~~---------~~~~~~~~DiwSlGv~l~~ll 213 (348)
T d2gfsa1 153 AVNEDCELKILDFGLARHTDD----------EMTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELL 213 (348)
T ss_dssp EECTTCCEEECCC----CCTG----------GGSSSCHHHHTSCHHHHTT---------CSCCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHCCCCC----------CCCCCCCCCCCCCCHHHCC---------CCCCCCCCCHHHHHHHHHHHH
T ss_conf 455432200132100012575----------4444345435558355337---------756785512432058999997
Q ss_pred HCCCCCCCHHHHH----HHHCCCC------------------------CCC---CCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 2799997047999----9936899------------------------996---46889988899999983002958898
Q 000470 155 LEVPFFELSHLLA----YRRGQYD------------------------PSQ---HLEKIPDSGIRKMILHMIQLEPELRF 203 (1472)
Q Consensus 155 tg~~~f~~~~~~~----~~~~~~~------------------------~~~---~l~~~~~~~l~~lI~~mL~~dP~~R~ 203 (1472)
+|.+||....... +.+.... +.. ......++.+++||.+||+.||++|+
T Consensus 214 ~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ 293 (348)
T d2gfsa1 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 293 (348)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 68899788988999999997307997577320010244544430355787555662678999999999997758834593
Q ss_pred CHHHHHHH
Q ss_conf 99999997
Q 000470 204 SAESYLQN 211 (1472)
Q Consensus 204 sa~e~L~~ 211 (1472)
||+|+|+|
T Consensus 294 ta~elL~H 301 (348)
T d2gfsa1 294 TAAQALAH 301 (348)
T ss_dssp CHHHHHTS
T ss_pred CHHHHHCC
T ss_conf 89998559
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-36 Score=246.64 Aligned_cols=201 Identities=16% Similarity=0.062 Sum_probs=151.9
Q ss_pred CCCCCCCE-EEEEEEECCEEEEEECCCCCCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 99988320-1289994895899930667959889709-999999999999999999999999889842488899799915
Q 000470 1 MSSTPCVH-KKFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 78 (1472)
Q Consensus 1 l~hpNIv~-~~~~~~~~~~~ylV~e~~~gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~ 78 (1472)
+.|+|++. +..++..+...|+||||+.++|.+.+.. ...+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 59 l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~ 138 (299)
T d1ckia_ 59 MQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL 138 (299)
T ss_dssp STTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC
T ss_pred CCCCCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCC
T ss_conf 03899601799999519877899987387133324430688768999999999999999999799442667876606433
Q ss_pred ---CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---99099971366432368899999972122059998642375211123786322457999952047888799999982
Q 000470 79 ---WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 79 ---~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t 155 (1472)
...++|+|||+++.................+..|++.|+|||.+. +..+++++||||+||++|||++
T Consensus 139 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~~l~el~t 208 (299)
T d1ckia_ 139 GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL----------GIEQSRRDDLESLGYVLMYFNL 208 (299)
T ss_dssp GGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT----------TBCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHH----------CCCCCCHHHEEECCHHHHHHHH
T ss_conf 577761565046751342554455410001357767873532999991----------8998983218861778999984
Q ss_pred CCCCCCCHHH----HHH---HHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7999970479----999---9368-999964688998889999998300295889899999997
Q 000470 156 EVPFFELSHL----LAY---RRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~~f~~~~~----~~~---~~~~-~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|.+||..... ..+ .... ..+...+....++++.+++.+|++.||++||++.++.+-
T Consensus 209 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~ 272 (299)
T d1ckia_ 209 GSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 272 (299)
T ss_dssp SSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9876655305779999998523567898357534788999999999843995579199999999
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-32 Score=223.14 Aligned_cols=245 Identities=11% Similarity=0.123 Sum_probs=202.7
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCE
Q ss_conf 34511234555589990799799999299979999399886442111105874169732799992499799999179949
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1130 (1472)
Q Consensus 1051 V~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I 1130 (1472)
.....+|.+.|++++|+|++++|++|+.||+|++||+..... +.......|...+.+++|++++..+++++.|+.|
T Consensus 90 ~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 165 (337)
T d1gxra_ 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 764048899689999867998898861233211111111111----1111111111111111111111111111111111
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCC
Q ss_conf 99980112468886433468545233027998589999713799872199999589749999599898654000478766
Q 000470 1131 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1210 (1472)
Q Consensus 1131 ~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g 1210 (1472)
++|++.+. ........+...+.+++|+++ +..+++++.++.|++||+++++.+..+. +.+
T Consensus 166 ~~~~~~~~--------------~~~~~~~~~~~~v~~l~~s~~---~~~~~~~~~d~~v~i~d~~~~~~~~~~~---~~~ 225 (337)
T d1gxra_ 166 AVWDLHNQ--------------TLVRQFQGHTDGASCIDISND---GTKLWTGGLDNTVRSWDLREGRQLQQHD---FTS 225 (337)
T ss_dssp EEEETTTT--------------EEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEEE---CSS
T ss_pred CCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCEEECCCC---CCC
T ss_conf 11111111--------------111111111111110123444---3211223566553211111100000246---666
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf 53899996999899999379939999789995100674156677204784259999744468999799998699499998
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1211 ~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWD 1290 (1472)
.|++++|+|++.++++|+.+|.+++||++....... ..+..+|..+.+ +|++. ++++++.|+.|.+||
T Consensus 226 ~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~i~~v~~-s~~g~---------~l~s~s~Dg~i~iwd 293 (337)
T d1gxra_ 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL--HLHESCVLSLKF-AYCGK---------WFVSTGKDNLLNAWR 293 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE--CCCSSCEEEEEE-CTTSS---------EEEEEETTSEEEEEE
T ss_pred CEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC--CCCCCCCCEEEE-CCCCC---------EEEEEECCCEEEEEE
T ss_conf 157999715303000000256421111111110000--124565416999-89999---------999994899699998
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECC
Q ss_conf 6887177898613588987668776323588988999753323445332223448999886781583448999-189816
Q 000470 1291 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGG 1369 (1472)
Q Consensus 1291 l~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg 1369 (1472)
+.++++...+. +...|++++|+|++ +|+||+
T Consensus 294 ~~~~~~~~~~~------------------------------------------------~~~~v~~~~~s~d~~~l~t~s 325 (337)
T d1gxra_ 294 TPYGASIFQSK------------------------------------------------ESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp TTTCCEEEEEE------------------------------------------------CSSCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEECC------------------------------------------------CCCCEEEEEEECCCCEEEEEE
T ss_conf 99997999926------------------------------------------------999879999927999999990
Q ss_pred CCCEEEEEEC
Q ss_conf 9990999739
Q 000470 1370 TDLKIRRWDH 1379 (1472)
Q Consensus 1370 ~Dg~IriWDl 1379 (1472)
.|++|++||+
T Consensus 326 ~D~~I~vWdl 335 (337)
T d1gxra_ 326 GDKKATVYEV 335 (337)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEEE
T ss_conf 8996999977
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=7.3e-35 Score=239.17 Aligned_cols=200 Identities=18% Similarity=0.077 Sum_probs=157.2
Q ss_pred CCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC--
Q ss_conf 998832012899948958999306679598897099-99999999999999999999999889842488899799915--
Q 000470 2 SSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-- 78 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~~~~~ylV~e~~~gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~-- 78 (1472)
+|+|++.++.+++.+...|+||||+.++|.+.+... ..+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 59 ~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~ 138 (293)
T d1csna_ 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 138 (293)
T ss_dssp TCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSS
T ss_pred CCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
T ss_conf 89998779999601881179999648887999975203110689999999999999999977966266771315234754
Q ss_pred ---CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---99099971366432368899999972122059998642375211123786322457999952047888799999982
Q 000470 79 ---WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 155 (1472)
Q Consensus 79 ---~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~el~t 155 (1472)
.+.++|+|||+++.................+..||+.|+|||.+. +..+++++||||+||++|||++
T Consensus 139 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~----------~~~~~~~~DiwSlG~~l~ellt 208 (293)
T d1csna_ 139 SKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL----------GREQSRRDDLEALGHVFMYFLR 208 (293)
T ss_dssp STTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEECCCCEEEECCCCCCCCCEEECCCCCEEECHHHCCHHHHC----------CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 344795687236605771467665411102467627751026798964----------8888869998983199999986
Q ss_pred CCCCCCCH----HHHHH---HHC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 79999704----79999---936-8999964688998889999998300295889899999997
Q 000470 156 EVPFFELS----HLLAY---RRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 156 g~~~f~~~----~~~~~---~~~-~~~~~~~l~~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
|.+||... ....+ ... ...+...+.+..++++.+++..|+..+|++||+.+.+.+-
T Consensus 209 g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~ 272 (293)
T d1csna_ 209 GSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 272 (293)
T ss_dssp SSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 9876788530219999999970567999589657998999999999843993008599999999
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.9e-32 Score=219.08 Aligned_cols=251 Identities=16% Similarity=0.209 Sum_probs=194.8
Q ss_pred EEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 63451123455558999079979999929997999939988644211110587416973279999249979999917994
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~ 1129 (1472)
......+|...|++++|+|++++|++|+.||+|++||...++ ......+|...|.++.+.+++..+++++.+|.
T Consensus 113 ~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 186 (388)
T d1erja_ 113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186 (388)
T ss_dssp ------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE------EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 110146778988999988999801213444111121111111------11111111111111011111111112221015
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC----
Q ss_conf 9999801124688864334685452330279985899997137998721999995897499995998986540004----
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA---- 1205 (1472)
Q Consensus 1130 I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~---- 1205 (1472)
+++|+.... ........+...+.+..+.++ +..+++++.||.|++||.+++.....+..
T Consensus 187 i~~~d~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 249 (388)
T d1erja_ 187 VRIWDLRTG--------------QCSLTLSIEDGVTTVAVSPGD---GKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249 (388)
T ss_dssp EEEEETTTT--------------EEEEEEECSSCEEEEEECSTT---CCEEEEEETTSCEEEEETTTCCEEEEEC-----
T ss_pred EEEEECCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCEEEEECCCCEEEEEECCCCCCCEEECCCCCC
T ss_conf 654101111--------------110000124544211236887---875899738981999634557300010244333
Q ss_pred -CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEE-----------CCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf -7876653899996999899999379939999789995100674-----------1566772047842599997444689
Q 000470 1206 -IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ-----------YSQVCPIEKMCLFVPPPNAAVSTTA 1273 (1472)
Q Consensus 1206 -~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~-----------~~~~~~I~~l~~~~p~~~~~~~s~~ 1273 (1472)
..|.+.|++++|+|++.+|++|+.||.+++||++......... ..+...|..+.+ +|++
T Consensus 250 ~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~-------- 320 (388)
T d1erja_ 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT-TQND-------- 320 (388)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE-CGGG--------
T ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE-CCCC--------
T ss_conf 4577898789999799999999978992898751577643210134442001101245532789998-8999--------
Q ss_pred CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99799998699499998688717789861358898766877632358898899975332344533222344899988678
Q 000470 1274 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1353 (1472)
Q Consensus 1274 ~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1353 (1472)
.++++++.|+.|.+||++++++...+..+.. .
T Consensus 321 -~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~-----------------------------------------------~ 352 (388)
T d1erja_ 321 -EYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-----------------------------------------------S 352 (388)
T ss_dssp -CEEEEEETTSEEEEEETTTCCEEEEEECCSS-----------------------------------------------C
T ss_pred -CEEEEEECCCEEEEEECCCCCEEEEEECCCC-----------------------------------------------C
T ss_conf -9999996989799999999969999968899-----------------------------------------------7
Q ss_pred CEEE------CCCCCC-CEEECCCCCEEEEEECC
Q ss_conf 1583------448999-18981699909997399
Q 000470 1354 IRSL------LPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1354 V~sl------~~~p~g-~LiTgg~Dg~IriWDl~ 1380 (1472)
|.++ .|+|++ .++|||.||+|++||++
T Consensus 353 V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEE
T ss_conf 8999984674258999999999189979997621
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.9e-33 Score=226.32 Aligned_cols=305 Identities=13% Similarity=0.134 Sum_probs=206.0
Q ss_pred CCCCCC-C--CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
Q ss_conf 885556-5--3634511234555589990799799999299979999399886442111105874169732799992499
Q 000470 1042 SGWRPR-G--ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p~-G--~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~ 1118 (1472)
..|+.. + .++..|++|.++|++++|+|++++|+|||.||+|+|||....+. ........|...|++++|.|++
T Consensus 32 ~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~----~~~~~~~~~~~~v~~i~~~p~~ 107 (371)
T d1k8kc_ 32 HIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW----KPTLVILRINRAARCVRWAPNE 107 (371)
T ss_dssp EEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE----EEEEECCCCSSCEEEEEECTTS
T ss_pred EEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCC----CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999888997899999558899888999979999999997999399986203321----1001223221100011111112
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC
Q ss_conf 79999917994999980112468886433468545233027998589999713799872199999589749999599898
Q 000470 1119 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1119 ~~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~ 1198 (1472)
+.|++++.||.+++|+++... ...........+...+.++.|+|+ +.++++++.|+.|++||+....
T Consensus 108 ~~l~~~s~d~~i~i~~~~~~~----------~~~~~~~~~~~~~~~v~~v~~~p~---~~~l~s~s~D~~v~v~~~~~~~ 174 (371)
T d1k8kc_ 108 KKFAVGSGSRVISICYFEQEN----------DWWVCKHIKKPIRSTVLSLDWHPN---SVLLAAGSCDFKCRIFSAYIKE 174 (371)
T ss_dssp SEEEEEETTSSEEEEEEETTT----------TEEEEEEECTTCCSCEEEEEECTT---SSEEEEEETTSCEEEEECCCTT
T ss_pred CCCEEECCCCCCEEEEEECCC----------CCCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCEEEEEEECCCC
T ss_conf 110000025763025442033----------433111001011122211111111---1110001347679998401576
Q ss_pred CCC----------------EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEEC
Q ss_conf 654----------------0004787665389999699989999937993999978999510067415667720478425
Q 000470 1199 NTW----------------TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFV 1262 (1472)
Q Consensus 1199 ~~~----------------~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~ 1262 (1472)
... ......|.+.+++++|+|+++.|++|+.||.|.+||++.+..+..+.. +..+|.++.| +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~s~~f-s 252 (371)
T d1k8kc_ 175 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ETLPLLAVTF-I 252 (371)
T ss_dssp TSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SSCCEEEEEE-E
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEC-CCCCCEEEEE-C
T ss_conf 4310012211111111011244047667478987512332100001478605886410121000001-4665203654-6
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999974446899979999869949999868871778986135889-876687763-235889889997533234453322
Q 000470 1263 PPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDG-DTEMSDLPW-AFARPSSRSNPKTDLRRNVNQKYR 1340 (1472)
Q Consensus 1263 p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~-~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~ 1340 (1472)
|++. +++++.|+.+.+|+.........+....... ......... ........ ....... .
T Consensus 253 ~d~~----------~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~ 314 (371)
T d1k8kc_ 253 TESS----------LVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK-------KASSEGS-A 314 (371)
T ss_dssp ETTE----------EEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC-------CC-------
T ss_pred CCCC----------EEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCC-------EEEEECC-C
T ss_conf 9997----------99998199267877608986288720206765421246220016850652-------0587124-5
Q ss_pred CCCCCCCCCCCCCCEEECCCCCC-----CEEECCCCCEEEEEECCCCC
Q ss_conf 23448999886781583448999-----18981699909997399999
Q 000470 1341 VDELNEPPPRLLGIRSLLPLPGG-----DLLTGGTDLKIRRWDHCSPG 1383 (1472)
Q Consensus 1341 ~~~l~~~~~~~~~V~sl~~~p~g-----~LiTgg~Dg~IriWDl~~~~ 1383 (1472)
.........|...|.++++.+.+ .++|+|.||.|++||+++.+
T Consensus 315 ~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~ 362 (371)
T d1k8kc_ 315 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362 (371)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred CCCCEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCH
T ss_conf 566141255569889999948998656799999189939999698684
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-31 Score=218.72 Aligned_cols=291 Identities=17% Similarity=0.217 Sum_probs=195.4
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEE---C----CCCEEEE
Q ss_conf 34511234555589990799799999299979999399886442111105874169732799992---4----9979999
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMML---R----HSAQVVV 1123 (1472)
Q Consensus 1051 V~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~---~----~~~~las 1123 (1472)
+...++|.+.|++++++ +++++|||.||+|+|||....+.............+...+..+... + +...+++
T Consensus 7 ~~~~~~H~~~I~~v~~~--~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EEESSCSSSCEEEEEEC--SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred EECCCCCCCCCEEEEEE--CCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE
T ss_conf 52087636712799996--9999999799969987898788776540467654204771676667500157998768999
Q ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCC--CCCEEEEEEECCCEEEEEECCCCCCC-
Q ss_conf 917994999980112468886433468545233027998589999713799--87219999958974999959989865-
Q 000470 1124 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDN--CASHMFMYSTQNCGIHLWDTRSNSNT- 1200 (1472)
Q Consensus 1124 ~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~--~s~~~Lv~at~dg~I~iwDlrt~~~~- 1200 (1472)
++.||.|++|++........... ... .... ...+...+..+.+.++. ..+..+++++.||.+.+||+......
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIF--EKL-DLLD-SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEE--EEE-CCSC-TTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EECCCCEEEEECCCCCCEEEEEC--CCC-CEEE-ECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 94899199998228982056512--456-3243-1157896689998447886542179998389819998740477534
Q ss_pred --------C------EE-ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC-----CCCCCCEEEEE
Q ss_conf --------4------00-0478766538999969998999993799399997899951006741-----56677204784
Q 000470 1201 --------W------TL-KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-----SQVCPIEKMCL 1260 (1472)
Q Consensus 1201 --------~------~l-~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~-----~~~~~I~~l~~ 1260 (1472)
. .. ....+...+++++|+|++ +|++|+.||.|++||++.+.++..+.. .|..+|.++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~ 239 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCC-EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 102331032000145100025789867899978999-8999938982999860233211000011111242563877004
Q ss_pred ECCCCCCCCCCCCCCEEEEEECCC---EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 259999744468999799998699---49999868871778986135889876687763235889889997533234453
Q 000470 1261 FVPPPNAAVSTTARPLIYVAAGCN---EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQ 1337 (1472)
Q Consensus 1261 ~~p~~~~~~~s~~~~~i~vas~dg---~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 1337 (1472)
+|++. ++++++.|+ .|.+||++++++...+.......
T Consensus 240 -spdg~---------~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~------------------------------ 279 (393)
T d1sq9a_ 240 -SPQGS---------LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS------------------------------ 279 (393)
T ss_dssp -CSSTT---------EEEEEEEETTEEEEEEEETTTCCEEEEECBC----------------------------------
T ss_pred -CCCCC---------EEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCC------------------------------
T ss_conf -66532---------01124289884210010353213444311566664------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 32223448999886781583448999-18981699909997399999964971899
Q 000470 1338 KYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPN 1392 (1472)
Q Consensus 1338 ~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~ 1392 (1472)
.......+|...|++++|+|++ .|+|||.|++||+||+.+++..+++.|..
T Consensus 280 ----~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~ 331 (393)
T d1sq9a_ 280 ----QASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHC 331 (393)
T ss_dssp --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCG
T ss_pred ----CCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCC
T ss_conf ----3102320235866600138988806987799989999999997999998868
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.7e-33 Score=226.01 Aligned_cols=311 Identities=13% Similarity=0.087 Sum_probs=209.2
Q ss_pred CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC-CCEEEEEECC
Q ss_conf 363451123455558999079979999929997999939988644211110587416973279999249-9799999179
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACD 1127 (1472)
Q Consensus 1049 ~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~-~~~las~s~D 1127 (1472)
++|..+++|++.|++|+|+|++++|||||.||+|+|||+....... .......|.++|++++|+++ +..+++|+.|
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~---~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV---DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE---EEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred CEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCE---EEEEECCCCCCEEEEEEECCCCCEEEECCCC
T ss_conf 7597688998978889995899999999799929999756998636---8988558999889999958999789981265
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC--
Q ss_conf 949999801124688864334685452330279985899997137998721999995897499995998986540004--
Q 000470 1128 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA-- 1205 (1472)
Q Consensus 1128 G~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~-- 1205 (1472)
|.|++|++.... .................+.++ ...+++++.++.+++||++..........
T Consensus 79 ~~v~~w~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~ 142 (342)
T d1yfqa_ 79 GEILKVDLIGSP-------------SFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp SCEEEECSSSSS-------------SEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCEEEEECCCCC-------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCEEECCCCCCCEEEECCC
T ss_conf 311454204432-------------000001111111111111111---1111110122211102023444330230002
Q ss_pred --CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC--CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
Q ss_conf --78766538999969998999993799399997899951006741--56677204784259999744468999799998
Q 000470 1206 --IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY--SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1281 (1472)
Q Consensus 1206 --~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~--~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas 1281 (1472)
.........+++.+.+..+++|+.||.+++||++.......... .....+..... .+. ++..+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~s 213 (342)
T d1yfqa_ 143 NSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL-LPK--------EQEGYACSS 213 (342)
T ss_dssp CSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE-CSG--------GGCEEEEEE
T ss_pred CCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEE-ECC--------CCCEEEEEC
T ss_conf 43001200000100016870246517984788760567634111210254221014676-369--------998788654
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 69949999868871778986135889876687763235889889997533234453322234489998867815834489
Q 000470 1282 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1361 (1472)
Q Consensus 1282 ~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p 1361 (1472)
.++.+.+|+............ .. ............++...+++++|+|
T Consensus 214 ~dg~~~v~~~~~~~~~~~~~~----------~~----------------------~~~~~~~~~~~~~~~~~v~~l~~sp 261 (342)
T d1yfqa_ 214 IDGRVAVEFFDDQGDDYNSSK----------RF----------------------AFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTT----------CE----------------------EEECCCCCTTCCSSCCCEEEEEECT
T ss_pred CCCEEEEEEECCCCCEEECCC----------CC----------------------EEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 899599998059864011123----------51----------------------2565553147776235431599669
Q ss_pred CC-CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99-18981699909997399999964971899889999840678605861999954058864012467887542017778
Q 000470 1362 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1440 (1472)
Q Consensus 1362 ~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1440 (1472)
++ +|+|||.||.|++||+.+.+....+..
T Consensus 262 ~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~-------------------------------------------------- 291 (342)
T d1yfqa_ 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAK-------------------------------------------------- 291 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEEECCC--------------------------------------------------
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEECC--------------------------------------------------
T ss_conf 844799987999899999998949887058--------------------------------------------------
Q ss_pred CCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 87530458752206982899980894389839
Q 000470 1441 CHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1441 ~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|...+ ++ +++++.++++|+.|+.+++|.
T Consensus 292 ~~~~~~--~~-~s~~~~~l~~a~sdd~~~~~~ 320 (342)
T d1yfqa_ 292 FNEDSV--VK-IACSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp CSSSEE--EE-EEECSSEEEEEEECTHHHHCS
T ss_pred CCCCEE--EE-EEECCCEEEEEECCCCEEEEE
T ss_conf 999879--99-994799999999199278830
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-31 Score=216.13 Aligned_cols=227 Identities=11% Similarity=0.116 Sum_probs=85.7
Q ss_pred EEECCCCC-CCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCCCCCC--CCCEEEECCCCCEEEEEEECCCCEEEEEE
Q ss_conf 34511234-5555899907--9979999929997999939988644211--11058741697327999924997999991
Q 000470 1051 VAHLQEHC-SAVNEIAISH--DHSFFVSASDDSTVKVWDSRKLEKDISF--RSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1051 V~~L~~H~-~~V~~iafsp--d~~~lvSgS~DGtVkIWD~~~~e~~~~~--~s~~t~~~~~~~I~~i~f~~~~~~las~s 1125 (1472)
+..+.+|. ..|++++|+| ++.+++||+.||+|+|||.......... .....+..+.++|.+++|++++..+++++
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 134 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf 28990789998899998117999799999489977985405886215651002541136567377999899988220100
Q ss_pred C--CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE
Q ss_conf 7--99499998011246888643346854523302799858999971379987219999958974999959989865400
Q 000470 1126 C--DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1126 ~--DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
. ++.+++|+.++.. .+.. ...|...+.+++|+++. ...+++++.|+.|++||++..+....+
T Consensus 135 ~~~~~~~~~~~~~~~~-------------~~~~-~~~h~~~v~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~ 198 (325)
T d1pgua1 135 EGRDNFGVFISWDSGN-------------SLGE-VSGHSQRINACHLKQSR--PMRSMTVGDDGSVVFYQGPPFKFSASD 198 (325)
T ss_dssp CCSSCSEEEEETTTCC-------------EEEE-CCSCSSCEEEEEECSSS--SCEEEEEETTTEEEEEETTTBEEEEEE
T ss_pred CCCCCEEEEEEECCCC-------------CCEE-EEECCCCCCCCCCCCCC--CCEEEEEECCCCCCCCCCCCCCCCEEC
T ss_conf 1244047888502331-------------1001-20012343211112343--206888621112211112211000000
Q ss_pred EC-CCCCCCEEEEEECCC-CCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
Q ss_conf 04-787665389999699-9899999379939999789995100674156677204784259999744468999799998
Q 000470 1204 KA-IPEEGYVSSLVTGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1281 (1472)
Q Consensus 1204 ~~-~~h~g~Itsi~~sp~-g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas 1281 (1472)
.. ..|.+.|++++|+|+ +.++++|+.||.|++||++.+..++.+.. +..++..+.+ ++. ..++.++++++
T Consensus 199 ~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~-~~~~v~~~~~-s~~------~~dg~~l~s~s 270 (325)
T d1pgua1 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED-DQEPVQGGIF-ALS------WLDSQKFATVG 270 (325)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB-TTBCCCSCEE-EEE------ESSSSEEEEEE
T ss_pred CCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCC-CCCCCCCCEE-EEE------CCCCCEEEEEE
T ss_conf 001577775277630345310000112332101343001222111111-1111111000-000------36899999995
Q ss_pred CCCEEEEEECCCCEEEEEEE
Q ss_conf 69949999868871778986
Q 000470 1282 GCNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1282 ~dg~V~VWDl~tg~~~~~l~ 1301 (1472)
.|+.|++||++++++...+.
T Consensus 271 ~D~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 271 ADATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp TTSEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEE
T ss_conf 89939999999997889999
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.9e-32 Score=223.48 Aligned_cols=272 Identities=14% Similarity=0.168 Sum_probs=204.2
Q ss_pred CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 65363451123455558999079979999929997999939988644211110587416973279999249979999917
Q 000470 1047 RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1047 ~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~ 1126 (1472)
.++++++|+||.++|++++|+| |+|||.||+|++||..++. ..|...|.++.+.++ ..+++++.
T Consensus 2 ~~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----------~~h~~~V~~~~~~~~-~~~~s~s~ 65 (287)
T d1pgua2 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----------QDHSNLIVSLDNSKA-QEYSSISW 65 (287)
T ss_dssp EEEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----------CCCCSCEEEEECCST-TCCEEEET
T ss_pred CCCEEEEECCCCCCEEEEEECC----EEEEECCCEEEEEECCCCC-----------CCCCCCEEEEEECCC-CEEEEEEE
T ss_conf 9603499988798649999895----7898489919999899988-----------887787899996599-72898861
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECC
Q ss_conf 99499998011246888643346854523302799858999971379987219999958974999959989865400047
Q 000470 1127 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1206 (1472)
Q Consensus 1127 DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~ 1206 (1472)
|+++++|++.... .+....++.++++ + .++..+.++.+.+|+...+.....+..
T Consensus 66 D~~v~~w~~~~~~---------------------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 119 (287)
T d1pgua2 66 DDTLKVNGITKHE---------------------FGSQPKVASANND---G-FTAVLTNDDDLLILQSFTGDIIKSVRL- 119 (287)
T ss_dssp TTEEEETTEEEEE---------------------CSSCEEEEEECSS---S-EEEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred CCCCCCCCCCCCC---------------------CCCCEEEEEECCC---C-CEEEEEECCCCEEEECCCEEEEEECCC-
T ss_conf 0122211111111---------------------1221014664167---8-569996033210000110035431012-
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCE
Q ss_conf 8766538999969998999993799-399997899951006741566772047842599997444689997999986994
Q 000470 1207 PEEGYVSSLVTGPCGNWFVSGSSRG-VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1285 (1472)
Q Consensus 1207 ~h~g~Itsi~~sp~g~~LvsGssdG-~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~ 1285 (1472)
...+ .++++++..+++|+.++ .+++|+++..........++..++..+.+ +|++. ++++++.++.
T Consensus 120 --~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~---------~l~~g~~dg~ 185 (287)
T d1pgua2 120 --NSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI-SPSET---------YIAAGDVMGK 185 (287)
T ss_dssp --SSCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE-CTTSS---------EEEEEETTSC
T ss_pred --CCEE--EEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEE-CCCCC---------CCCCCCCCCC
T ss_conf --2203--56521475111000221000210001221000121024785369995-16765---------2110111111
Q ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC--
Q ss_conf 999986887177898613588987668776323588988999753323445332223448999886781583448999--
Q 000470 1286 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1363 (1472)
Q Consensus 1286 V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-- 1363 (1472)
|.+||+.++....... ..|...|.+++|+|.+
T Consensus 186 i~i~d~~~~~~~~~~~----------------------------------------------~~h~~~v~~~~~~p~~~~ 219 (287)
T d1pgua2 186 ILLYDLQSREVKTSRW----------------------------------------------AFRTSKINAISWKPAEKG 219 (287)
T ss_dssp EEEEETTTTEEEECCS----------------------------------------------CCCSSCEEEEEECCCC--
T ss_pred CCCEEECCCCCCCCCC----------------------------------------------CCCCCCCCEEEECCCCCC
T ss_conf 0000002332110001----------------------------------------------111111100000136541
Q ss_pred ---------CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf ---------18981699909997399999964971899889999840678605861999954058864012467887542
Q 000470 1364 ---------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1434 (1472)
Q Consensus 1364 ---------~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1434 (1472)
+++||+.|+.|++||+.++......
T Consensus 220 ~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~---------------------------------------------- 253 (287)
T d1pgua2 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA---------------------------------------------- 253 (287)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESSCTTCCEEE----------------------------------------------
T ss_pred CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE----------------------------------------------
T ss_conf 0012678870276649995999888999758999----------------------------------------------
Q ss_pred HCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 01777887530458752206982899980894389839
Q 000470 1435 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1435 ~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+.+|.+.|++++ |++++ .|+|++.||.|++|+
T Consensus 254 ----~~~h~~~V~~v~-~~~~~-~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 254 ----LNAHKDGVNNLL-WETPS-TLVSSGADACIKRWN 285 (287)
T ss_dssp ----TTSSTTCEEEEE-EEETT-EEEEEETTSCEEEEE
T ss_pred ----ECCCCCCEEEEE-ECCCC-EEEEEECCCEEEEEE
T ss_conf ----278789858999-98999-899997999299999
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-31 Score=214.34 Aligned_cols=286 Identities=19% Similarity=0.303 Sum_probs=204.1
Q ss_pred EEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 63451123455558999079979999929997999939988644211110587416973279999249979999917994
Q 000470 1050 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1050 lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~ 1129 (1472)
.+....+|...|+|++ +|+++|||||.||+|+|||+.+++ ...++.+|.+.|+++.| +++.|++|+.||.
T Consensus 7 ~i~~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~------~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~ 76 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLE------CKRILTGHTGSVLCLQY--DERVIITGSSDST 76 (293)
T ss_dssp CEECCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCC------EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEECCCCCCCCEEEEE--ECCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEC--CCCEEECCCCCCC
T ss_conf 9843289999889998--769999999289939999999991------99999267787763423--6300210011101
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE-ECCCC
Q ss_conf 99998011246888643346854523302799858999971379987219999958974999959989865400-04787
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL-KAIPE 1208 (1472)
Q Consensus 1130 I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l-~~~~h 1208 (1472)
|++|++.... ...... ........ +... ...++++..++.+.+||.......... ....|
T Consensus 77 i~~~~~~~~~-------------~~~~~~-~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (293)
T d1p22a2 77 VRVWDVNTGE-------------MLNTLI-HHCEAVLH--LRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 137 (293)
T ss_dssp EEEEESSSCC-------------EEEEEC-CCCSCEEE--EECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred CCCCCCCCCC-------------CCCCCC-CCCCCCCC--CCCC---CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 1000002464-------------100111-11100001--1111---100000135663068613445444212100011
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 66538999969998999993799399997899951006741566772047842599997444689997999986994999
Q 000470 1209 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1288 (1472)
Q Consensus 1209 ~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~V 1288 (1472)
...+.++.+. ...+++++.||.+++||++...++..+.. +...+..+.+ . +..+++++.|+.|.+
T Consensus 138 ~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~-~-----------~~~l~~~~~dg~i~i 202 (293)
T d1p22a2 138 RAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNG-HKRGIACLQY-R-----------DRLVVSGSSDNTIRL 202 (293)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEE-E-----------TTEEEEEETTSCEEE
T ss_pred CCCCCCCEEC--CCCCCCCCCCCCEEEECCCCCCEEEEECC-CCCCCCCCCC-C-----------CCEEEEECCCCEEEE
T ss_conf 3543110000--02201106998604100788838899715-5445322168-9-----------875887658998999
Q ss_pred EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEC
Q ss_conf 98688717789861358898766877632358898899975332344533222344899988678158344899918981
Q 000470 1289 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTG 1368 (1472)
Q Consensus 1289 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~LiTg 1368 (1472)
||+.+..+...+.... ..+.++.+ ....+++|
T Consensus 203 ~d~~~~~~~~~~~~~~-----------------------------------------------~~v~~~~~-~~~~l~sg 234 (293)
T d1p22a2 203 WDIECGACLRVLEGHE-----------------------------------------------ELVRCIRF-DNKRIVSG 234 (293)
T ss_dssp EETTTCCEEEEECCCS-----------------------------------------------SCEEEEEC-CSSEEEEE
T ss_pred EECCCCEEEEEECCCC-----------------------------------------------EEEEECCC-CCEEEEEE
T ss_conf 8665561466521431-----------------------------------------------00000145-41079998
Q ss_pred CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 69990999739999996497189988999984067860586199995405886401246788754201777887530458
Q 000470 1369 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1448 (1472)
Q Consensus 1369 g~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1448 (1472)
+.||.|++||+..........+. .....+.+|.+.|++
T Consensus 235 ~~dg~i~iwd~~~~~~~~~~~~~------------------------------------------~~~~~~~~H~~~V~~ 272 (293)
T d1p22a2 235 AYDGKIKVWDLVAALDPRAPAGT------------------------------------------LCLRTLVEHSGRVFR 272 (293)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTT------------------------------------------TEEEEECCCSSCCCC
T ss_pred CCCCEEEEEECCCCCCCCCCCCC------------------------------------------EEEEEECCCCCCEEE
T ss_conf 67997999988888644456775------------------------------------------455784588998899
Q ss_pred EEEEECCCCEEEEECCCCEEEECC
Q ss_conf 752206982899980894389839
Q 000470 1449 LGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1449 ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++ | ++.+|+|||.||+|+||+
T Consensus 273 v~-~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 273 LQ-F--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EE-E--CSSCEEECCSSSEEEEEC
T ss_pred EE-E--CCCEEEEEECCCEEEEEC
T ss_conf 99-7--199999992299899959
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-30 Score=211.60 Aligned_cols=298 Identities=12% Similarity=0.100 Sum_probs=210.0
Q ss_pred CCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCCCCCCEEEECCC-CCEEEEEEEC--CCCEEEEEECCCCEEEEE
Q ss_conf 5555899907997999992999-79999399886442111105874169-7327999924--997999991799499998
Q 000470 1059 SAVNEIAISHDHSFFVSASDDS-TVKVWDSRKLEKDISFRSRLTYHLEG-SRALCTMMLR--HSAQVVVGACDGIIHMFS 1134 (1472)
Q Consensus 1059 ~~V~~iafspd~~~lvSgS~DG-tVkIWD~~~~e~~~~~~s~~t~~~~~-~~I~~i~f~~--~~~~las~s~DG~I~iwd 1134 (1472)
+.+++++|+|++..|+.++.+. .++.||...... .....+.+|. ..|++++|+| ++..+++|+.||+|++|+
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~----~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd 93 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKV----PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 93 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSS----CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCC----CCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 98479999899799999969987999976888876----50289907899988999981179997999994899779854
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEC--CCEEEEEECCCCCCCCEEECCCCCCCE
Q ss_conf 011246888643346854523302799858999971379987219999958--974999959989865400047876653
Q 000470 1135 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ--NCGIHLWDTRSNSNTWTLKAIPEEGYV 1212 (1472)
Q Consensus 1135 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~--dg~I~iwDlrt~~~~~~l~~~~h~g~I 1212 (1472)
+...... ... .. ........+...+..+.|+++ +..+++++. ++.+.+|+..+++....+.. |.+.+
T Consensus 94 ~~~~~~~-~~~---~~--~~~~~~~~~~~~v~~v~~s~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v 162 (325)
T d1pgua1 94 WTFDKES-NSV---EV--NVKSEFQVLAGPISDISWDFE---GRRLCVVGEGRDNFGVFISWDSGNSLGEVSG--HSQRI 162 (325)
T ss_dssp EEEEGGG-TEE---EE--EEEEEEECCSSCEEEEEECTT---SSEEEEEECCSSCSEEEEETTTCCEEEECCS--CSSCE
T ss_pred ECCCCCE-EEE---EC--CCCCCCCCCCCCEEEEEECCC---CCCCCEEECCCCCEEEEEEECCCCCCEEEEE--CCCCC
T ss_conf 0588621-565---10--025411365673779998999---8822010012440478885023311001200--12343
Q ss_pred EEEEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEEC--CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 89999699989-99993799399997899951006741--5667720478425999974446899979999869949999
Q 000470 1213 SSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQY--SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1213 tsi~~sp~g~~-LvsGssdG~I~lWDlR~~~~i~s~~~--~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VW 1289 (1472)
++++|+|++.. +++|+.||.+++||++.......... .+...|.++++ +|+. +.++++++.|+.|.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~-~pd~--------~~~l~s~~~d~~i~iw 233 (325)
T d1pgua1 163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF-SPDS--------GEFVITVGSDRKISCF 233 (325)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE-CSTT--------CCEEEEEETTCCEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEE-CCCC--------CEECCCCCCCCCEEEE
T ss_conf 211112343206888621112211112211000000001577775277630-3453--------1000011233210134
Q ss_pred ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECC
Q ss_conf 86887177898613588987668776323588988999753323445332223448999886781583448999189816
Q 000470 1290 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGG 1369 (1472)
Q Consensus 1290 Dl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~LiTgg 1369 (1472)
|++++++...+..+.. .+...+.++.+.++..+++|+
T Consensus 234 d~~~~~~~~~l~~~~~-------------------------------------------~v~~~~~s~~~~dg~~l~s~s 270 (325)
T d1pgua1 234 DGKSGEFLKYIEDDQE-------------------------------------------PVQGGIFALSWLDSQKFATVG 270 (325)
T ss_dssp ETTTCCEEEECCBTTB-------------------------------------------CCCSCEEEEEESSSSEEEEEE
T ss_pred EECCCCCCCCCCCCCC-------------------------------------------CCCCCEEEEECCCCCEEEEEE
T ss_conf 3001222111111111-------------------------------------------111100000036899999995
Q ss_pred CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 99909997399999964971899889999840678605861999954058864012467887542017778875304587
Q 000470 1370 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1449 (1472)
Q Consensus 1370 ~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~i 1449 (1472)
.|+.|++||+.+++....+... .|.-.+..+
T Consensus 271 ~D~~i~iwd~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~ 301 (325)
T d1pgua1 271 ADATIRVWDVTTSKCVQKWTLD-------------------------------------------------KQQLGNQQV 301 (325)
T ss_dssp TTSEEEEEETTTTEEEEEEECC-------------------------------------------------TTCGGGCEE
T ss_pred CCCEEEEEECCCCCEEEEEEEC-------------------------------------------------CCCCCCEEE
T ss_conf 8993999999999788999954-------------------------------------------------874067699
Q ss_pred EEEECCCCEEEEECCCCEEEECC
Q ss_conf 52206982899980894389839
Q 000470 1450 GSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1450 a~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
++...+...|+|+|.||.|+||+
T Consensus 302 ~~~~~~~~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 302 GVVATGNGRIISLSLDGTLNFYE 324 (325)
T ss_dssp EEEEEETTEEEEEETTSCEEEEE
T ss_pred EEEECCCCEEEEEECCCEEEEEE
T ss_conf 99988999999997999999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-29 Score=205.64 Aligned_cols=255 Identities=19% Similarity=0.308 Sum_probs=214.2
Q ss_pred CCCCC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 98855-56536345112345555899907997999992999799993998864421111058741697327999924997
Q 000470 1041 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~-p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
-..|+ ..|.++..+.+|.+.|++++++|++.++++++.++++.+|+....+ ....+..+...+.++.|.++++
T Consensus 41 i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 114 (317)
T d1vyhc1 41 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE------CIRTMHGHDHNVSSVSIMPNGD 114 (317)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC------EEECCCCCSSCEEEEEECSSSS
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCEEEECCCCCC
T ss_conf 9999899997999995788867777630111101111111110111001111------1111000000000000169985
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99999179949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++++.|+.+++|++.+.. ..... ..+...+.++.++++ +..+++++.|+.|++||++++..
T Consensus 115 ~~~~~~~d~~~~~~~~~~~~-------------~~~~~-~~~~~~~~~~~~~~~---~~~l~~~~~d~~v~~~~~~~~~~ 177 (317)
T d1vyhc1 115 HIVSASRDKTIKMWEVQTGY-------------CVKTF-TGHREWVRMVRPNQD---GTLIASCSNDQTVRVWVVATKEC 177 (317)
T ss_dssp EEEEEETTSEEEEEETTTCC-------------EEEEE-ECCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEECCCCCEEEEECCCCE-------------EEEEE-CCCCCCCEEEECCCC---CCEEEEEECCCEEEEEEECCCEE
T ss_conf 57765267523575114430-------------34687-167776300001667---99999992798299975125403
Q ss_pred CCEEECCCCCCCEEEEEECCCC--------------------CEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEE
Q ss_conf 5400047876653899996999--------------------89999937993999978999510067415667720478
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCG--------------------NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1259 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g--------------------~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~ 1259 (1472)
...+.. |.+.+.+++++|++ ..+++|+.||.+++||++.+.++..+.. +..+|..+.
T Consensus 178 ~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-~~~~v~~~~ 254 (317)
T d1vyhc1 178 KAELRE--HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVL 254 (317)
T ss_dssp EEEECC--CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEE
T ss_pred EEEEEC--CCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEC-CCCCEEEEE
T ss_conf 478824--77873379986325641110345630343025886147516997899988899968899968-899879999
Q ss_pred EECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 42599997444689997999986994999986887177898613588987668776323588988999753323445332
Q 000470 1260 LFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1339 (1472)
Q Consensus 1260 ~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1339 (1472)
+ +|++. ++++++.|+.|.+||+.++++..++..
T Consensus 255 ~-~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------------------- 287 (317)
T d1vyhc1 255 F-HSGGK---------FILSCADDKTLRVWDYKNKRCMKTLNA------------------------------------- 287 (317)
T ss_dssp E-CSSSS---------CEEEEETTTEEEEECCTTSCCCEEEEC-------------------------------------
T ss_pred E-CCCCC---------EEEEEECCCEEEEEECCCCCEEEEECC-------------------------------------
T ss_conf 8-79999---------999997989499999999919999928-------------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCEEEEEE
Q ss_conf 223448999886781583448999-189816999099973
Q 000470 1340 RVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1340 ~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWD 1378 (1472)
|...|++++|++++ .|+|||.|+.|++||
T Consensus 288 ----------h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 288 ----------HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp ----------CSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred ----------CCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf ----------999889999949999999992899499829
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-29 Score=202.33 Aligned_cols=259 Identities=17% Similarity=0.232 Sum_probs=203.8
Q ss_pred CCCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 988555-6536345112345555899907997999992999799993998864421111058741697327999924997
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
-..|+. .|..+..+.+|.++|++++|+|++.++++|+.|+++++|+........ +......+|..... ........
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~ 155 (340)
T d1tbga_ 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV--RVSRELAGHTGYLS-CCRFLDDN 155 (340)
T ss_dssp EEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCC--CEEEEECCCSSCEE-EEEEEETT
T ss_pred EEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCC--CCCEECCCCCCCCC-CCCCCCCC
T ss_conf 5563102102579972465337756760121144310133201013322221222--11100135421101-11111111
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99999179949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
.+..+..|+....+..... ............+....+.+. ...+++++.++.|++||+++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~v~i~d~~~~~~ 218 (340)
T d1tbga_ 156 QIVTSSGDTTCALWDIETG--------------QQTTTFTGHTGDVMSLSLAPD---TRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp EEEEEETTTEEEEEETTTT--------------EEEEEEECCSSCEEEEEECTT---SSEEEEEETTTEEEEEETTTTEE
T ss_pred CCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCEEEEEECCCCC---CCEEEEEECCCEEEEEECCCCCE
T ss_conf 1111124454320012322--------------111112331015763001244---21268760573699999999948
Q ss_pred CCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CCCCCEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 540004787665389999699989999937993999978999510067415-6677204784259999744468999799
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~~~i~ 1278 (1472)
..++.. |.+.|++++|+|++.+|++|+.||.+++||++....+..+... +..++..+.+ +|++. +++
T Consensus 219 ~~~~~~--h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~---------~l~ 286 (340)
T d1tbga_ 219 RQTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF-SKSGR---------LLL 286 (340)
T ss_dssp EEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE-CSSSC---------EEE
T ss_pred EEEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE-CCCCC---------EEE
T ss_conf 899957--889858999979989999996999699975212211111112244574589999-89999---------999
Q ss_pred EEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 99869949999868871778986135889876687763235889889997533234453322234489998867815834
Q 000470 1279 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1279 vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
+++.++.|.+||+.++++...+.. |...|++++
T Consensus 287 ~g~~dg~i~iwd~~~~~~~~~~~~-----------------------------------------------H~~~V~~l~ 319 (340)
T d1tbga_ 287 AGYDDFNCNVWDALKADRAGVLAG-----------------------------------------------HDNRVSCLG 319 (340)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC-----------------------------------------------CSSCEEEEE
T ss_pred EEECCCEEEEEECCCCCEEEEECC-----------------------------------------------CCCCEEEEE
T ss_conf 997979899999999939899848-----------------------------------------------999789999
Q ss_pred CCCCC-CEEECCCCCEEEEEE
Q ss_conf 48999-189816999099973
Q 000470 1359 PLPGG-DLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1359 ~~p~g-~LiTgg~Dg~IriWD 1378 (1472)
|+|++ .++|||.||.|++||
T Consensus 320 ~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 320 VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCEEEEECCCCEEEEEC
T ss_conf 908999999990699799859
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-32 Score=222.89 Aligned_cols=190 Identities=23% Similarity=0.263 Sum_probs=140.6
Q ss_pred CCCCCCEEEEEEEE--CCEEEEEECCCC--CCHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCE
Q ss_conf 99883201289994--895899930667--95988--97099999999999999999999999998-8984248889979
Q 000470 2 SSTPCVHKKFWQET--DKAAYLLRQYFF--NSLRD--RLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENV 74 (1472)
Q Consensus 2 ~hpNIv~~~~~~~~--~~~~ylV~e~~~--gsL~d--~l~~~~~l~~~~~~~i~~Qil~aL~~lH~-~gIvH~DIKpeNI 74 (1472)
+|+||+++++++.. ....+++++++. +.... .......+++.+++.++.|++.||+|||+ +||+||||||+||
T Consensus 78 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NI 157 (362)
T d1q8ya_ 78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 157 (362)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred CCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE
T ss_conf 76764789987631256520234320003542000001223467868999999999999988876405864656770570
Q ss_pred EECCCC------CEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 991599------09997136643236889999997212205999864237521112378632245799995204788879
Q 000470 75 LVTSWN------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 148 (1472)
Q Consensus 75 Lv~~~~------~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~~~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~ 148 (1472)
|++..+ .++++|||.++.... ......+++.|+|||++. ...++.++||||+||
T Consensus 158 ll~~~~~~~~~~~~kl~dfg~s~~~~~----------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~ 217 (362)
T d1q8ya_ 158 LMEIVDSPENLIQIKIADLGNACWYDE----------HYTNSIQTREYRSPEVLL----------GAPWGCGADIWSTAC 217 (362)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTB----------CCCSCCSCGGGCCHHHHH----------TCCCCTHHHHHHHHH
T ss_pred EEECCCCCCCCCEEEEEECCCCCCCCC----------CCCCCCCCCCCCCHHHCC----------CCCCCCCCCCCCHHH
T ss_conf 563057656443056753144212344----------542236652105713214----------667776432012378
Q ss_pred HHHHHHHCCCCCCCHHHH----------HH------------HHCCC-----------CC--C-------------CCCC
Q ss_conf 999998279999704799----------99------------93689-----------99--9-------------6468
Q 000470 149 VIAELFLEVPFFELSHLL----------AY------------RRGQY-----------DP--S-------------QHLE 180 (1472)
Q Consensus 149 vl~el~tg~~~f~~~~~~----------~~------------~~~~~-----------~~--~-------------~~l~ 180 (1472)
++++|++|++||...... .. ....+ .. . ....
T Consensus 218 il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (362)
T d1q8ya_ 218 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 297 (362)
T ss_dssp HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 99999878899898755432102689999999837998788624532200013201220243235776444210001567
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 8998889999998300295889899999997
Q 000470 181 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 211 (1472)
Q Consensus 181 ~~~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 211 (1472)
...++.+++||.+||..||++||||+|+|+|
T Consensus 298 ~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 298 KDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp HHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 4358999999999877994579089999669
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=5.5e-28 Score=194.40 Aligned_cols=258 Identities=16% Similarity=0.206 Sum_probs=190.8
Q ss_pred CCCCC-CCCEEEECC-CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 88555-653634511-2345555899907997999992999799993998864421111058741697327999924997
Q 000470 1042 SGWRP-RGILVAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~-~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
..|+. .|.++..+. +|.+.|++++|+|++.++ +++.|+++++|+....... ........+...+.+++|++++.
T Consensus 37 ~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~-~~~~d~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~ 112 (299)
T d1nr0a2 37 NSWDISTGISNRVFPDVHATMITGIKTTSKGDLF-TVSWDDHLKVVPAGGSGVD---SSKAVANKLSSQPLGLAVSADGD 112 (299)
T ss_dssp EEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE-EEETTTEEEEECSSSSSSC---TTSCCEEECSSCEEEEEECTTSS
T ss_pred EEEECCCCCEEEEECCCCCCCEEEEEEECCCEEE-CCCCEEEEEEECCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999968899837887748998840331121-0231026887316776201---11000111134432100112211
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99999179949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
.+++++ ++.+.+|+.... .. ...+....++.++++ ++.+++++.+|.|++||+++++.
T Consensus 113 ~~~~~~-~~~i~~~~~~~~----------------~~--~~~~~~~~~~~~s~~---~~~l~~g~~dg~i~~~d~~~~~~ 170 (299)
T d1nr0a2 113 IAVAAC-YKHIAIYSHGKL----------------TE--VPISYNSSCVALSND---KQFVAVGGQDSKVHVYKLSGASV 170 (299)
T ss_dssp CEEEEE-SSEEEEEETTEE----------------EE--EECSSCEEEEEECTT---SCEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCCC-CCCCCCCCCCCC----------------CC--CCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 111222-222211111111----------------11--011112332211111---11111111111111111111111
Q ss_pred CCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEE--CCCCCCCEEEEEECCCCCCCCCCCCCCEE
Q ss_conf 5400047876653899996999899999379939999789995100674--15667720478425999974446899979
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--YSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~--~~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1277 (1472)
... ....|.+.|++++|+|++.++++|+.+|.+.+||++.+....... ..|..+|+++.+ +|++. ++
T Consensus 171 ~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~~~~---------~l 239 (299)
T d1nr0a2 171 SEV-KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW-SPDNV---------RL 239 (299)
T ss_dssp EEE-EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE-CTTSS---------EE
T ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC---------CE
T ss_conf 111-11111111111111111111111111111111111111111111111111111111124-66645---------13
Q ss_pred EEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99986994999986887177898613588987668776323588988999753323445332223448999886781583
Q 000470 1278 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1357 (1472)
Q Consensus 1278 ~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1357 (1472)
++++.|+.|.+||++++.....+... ..+...+.++
T Consensus 240 ~sgs~dg~i~iwd~~~~~~~~~~~~~--------------------------------------------~~~~~~v~~~ 275 (299)
T d1nr0a2 240 ATGSLDNSVIVWNMNKPSDHPIIIKG--------------------------------------------AHAMSSVNSV 275 (299)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETT--------------------------------------------SSTTSCEEEE
T ss_pred EEECCCCEEEEEECCCCCCCEEEEEC--------------------------------------------CCCCCCEEEE
T ss_conf 88828997999989999731489834--------------------------------------------8988968999
Q ss_pred CCCCCCCEEECCCCCEEEEEECC
Q ss_conf 44899918981699909997399
Q 000470 1358 LPLPGGDLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1358 ~~~p~g~LiTgg~Dg~IriWDl~ 1380 (1472)
.+.++..++|||.|+.||+||+.
T Consensus 276 ~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 276 IWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEEETTEEEEEETTSCEEEEECC
T ss_pred EECCCCEEEEEECCCEEEEEECC
T ss_conf 97798999999289979999444
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.1e-27 Score=192.35 Aligned_cols=283 Identities=16% Similarity=0.216 Sum_probs=181.8
Q ss_pred EEEECCCCCCCE-EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 634511234555-5899907997999992999799993998864421111058741697327999924997999991799
Q 000470 1050 LVAHLQEHCSAV-NEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1050 lV~~L~~H~~~V-~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG 1128 (1472)
...+|+||.+.| +|+++ ++++|+|||.||+|+|||..+++ ...++.+|.+.|++++|+++ +.+++|+.||
T Consensus 4 ~~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~------~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~ 74 (355)
T d1nexb2 4 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK------FLLQLSGHDGGVWALKYAHG-GILVSGSTDR 74 (355)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTE------EEEEEECCSSCEEEEEEETT-TEEEEEETTC
T ss_pred CCEEECCCCCCCEEEEEE--CCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEECCC-CEEEEEECCC
T ss_conf 758889837886999998--89999999189909999899993------99999789998899998699-9999996452
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEE-CCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC--
Q ss_conf 49999801124688864334685452330-279985899997137998721999995897499995998986540004--
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKK-DTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA-- 1205 (1472)
Q Consensus 1129 ~I~iwdi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~-- 1205 (1472)
.|++|++.... ..... ............+.++ +..+++++.|+.|++||+++.........
T Consensus 75 ~i~iw~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~ 138 (355)
T d1nexb2 75 TVRVWDIKKGC-------------CTHVFEGHNSTVRCLDIVEYKN---IKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138 (355)
T ss_dssp CEEEEETTTTE-------------EEEEECCCSSCEEEEEEEEETT---EEEEEEEETTSEEEEEECCC-----------
T ss_pred CCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCC---CCEEEEECCCCCEEEEECCCCCEECCCCCCC
T ss_conf 44321111111-------------1111100111111111111123---2204554388868999856773001246520
Q ss_pred -------------------CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCC
Q ss_conf -------------------7876653899996999899999379939999789995100674156677204784259999
Q 000470 1206 -------------------IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1266 (1472)
Q Consensus 1206 -------------------~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~ 1266 (1472)
..|...+ .++.++++.+++|..|+.+++||++.+..+..+.. +...+..+.+ +|...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~-~~~~~ 214 (355)
T d1nexb2 139 DYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIY-DHERK 214 (355)
T ss_dssp CCCEEESCTTTCTTEEEEEECCSSCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEE-ETTTT
T ss_pred EECCCEECCCCCCCEEEEEEECCCCC--CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEC-CCCCCCCCCC-CCCCE
T ss_conf 00100000112340121011002221--00002563344211442044430131100011000-1233211111-12100
Q ss_pred CCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 74446899979999869949999868871778986135889876687763235889889997533234453322234489
Q 000470 1267 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1346 (1472)
Q Consensus 1267 ~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1346 (1472)
.+++++.++.|.+||++++.+...+..
T Consensus 215 ---------~~~~~~~d~~i~i~d~~~~~~~~~~~~-------------------------------------------- 241 (355)
T d1nexb2 215 ---------RCISASMDTTIRIWDLENGELMYTLQG-------------------------------------------- 241 (355)
T ss_dssp ---------EEEEEETTSCEEEEETTTCCEEEEECC--------------------------------------------
T ss_pred ---------EEECCCCCCEEEEEECCCCCCCCCCCC--------------------------------------------
T ss_conf ---------210124563687630122111111111--------------------------------------------
Q ss_pred CCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
Q ss_conf 99886781583448999189816999099973999999649718998899998406786058619999540588640124
Q 000470 1347 PPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLT 1426 (1472)
Q Consensus 1347 ~~~~~~~V~sl~~~p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~ 1426 (1472)
|...|.++.+++ ..+++|+.||.|++||+.+.... +.
T Consensus 242 ---h~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~--~~------------------------------------- 278 (355)
T d1nexb2 242 ---HTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRK--FS------------------------------------- 278 (355)
T ss_dssp ---CSSCCCEEEECS-SEEEEECTTSEEEEEETTTCCEE--EE-------------------------------------
T ss_pred ---CCCCCCCCCCCC-CEEEEEECCCCCCCCCCCCCCEE--CC-------------------------------------
T ss_conf ---111111112321-00333201111111111111100--01-------------------------------------
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 6788754201777887530458752206982899980894389839
Q 000470 1427 AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1427 ~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|...+.+++.+.+++.++++|+ ||.|+||+
T Consensus 279 --------------~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd 309 (355)
T d1nexb2 279 --------------YHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 309 (355)
T ss_dssp --------------EECTTCCCCCEEEECSSEEEEEE-TTEEEEEE
T ss_pred --------------CCCCCCEEEEEECCCCCEEEEEE-CCEEEEEE
T ss_conf --------------24688229999849998999980-99799999
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=8.4e-26 Score=180.20 Aligned_cols=256 Identities=18% Similarity=0.241 Sum_probs=176.9
Q ss_pred CCCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEE--------
Q ss_conf 988555-65363451123455558999079979999929997999939988644211110587416973279--------
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC-------- 1111 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~-------- 1111 (1472)
-..|+. .|++++++.+|.++|++++|+|+ ++++|+.||++++|+........ ....+...+..
T Consensus 39 i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 110 (342)
T d2ovrb2 39 LKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIH------TLYGHTSTVRCMHLHEKRV 110 (342)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEE
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEECCCCCCCCCCCCCCEE------CCCCCCEEEEEEECCCCCC
T ss_conf 999989999799999488999899994798--63210000011111111000000------0123330476520246522
Q ss_pred ------------------------------EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf ------------------------------99924997999991799499998011246888643346854523302799
Q 000470 1112 ------------------------------TMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKE 1161 (1472)
Q Consensus 1112 ------------------------------i~f~~~~~~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1472)
.........+++++.||.|++|+..... .+... ..+
T Consensus 111 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-------------~~~~~-~~~ 176 (342)
T d2ovrb2 111 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-------------CLHTL-QGH 176 (342)
T ss_dssp EEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTE-------------EEEEE-CCC
T ss_pred CCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCCCCEEEEECCCCEEEEEECCCCE-------------EEEEE-CCC
T ss_conf 1234440378740355630011100111100000133302433589869995252343-------------66787-275
Q ss_pred CCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 85899997137998721999995897499995998986540004787665389999699989999937993999978999
Q 000470 1162 GAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL 1241 (1472)
Q Consensus 1162 ~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~ 1241 (1472)
...+....+ + +..+++++.||.|++||++.++....+.. |...+.++.++ +++|++|+.||.|++||++..
T Consensus 177 ~~~~~~~~~--~---~~~l~s~~~dg~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~ 247 (342)
T d2ovrb2 177 TNRVYSLQF--D---GIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELK--DNILVSGNADSTVKIWDIKTG 247 (342)
T ss_dssp SSCEEEEEE--C---SSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred CCCCCCCCC--C---CCEEEEEECCCEEEEEECCCCEEEEEECC--CCCCEEEEECC--CCEEEEECCCCEEEEEECCCC
T ss_conf 444210068--9---99999995899399952556536567416--65320577068--999999748988999865544
Q ss_pred CCCCEEECCC--CCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 5100674156--67720478425999974446899979999869949999868871778986135889876687763235
Q 000470 1242 VPVNSWQYSQ--VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFA 1319 (1472)
Q Consensus 1242 ~~i~s~~~~~--~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~ 1319 (1472)
.....+.... ...+..+.+ + +.++++++.||.|++||++++++.+.+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~-------------- 301 (342)
T d2ovrb2 248 QCLQTLQGPNKHQSAVTCLQF---N---------KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES-------------- 301 (342)
T ss_dssp CEEEEECSTTSCSSCEEEEEE---C---------SSEEEEEETTSEEEEEETTTCCEEEEEEECTT--------------
T ss_pred CCCCCCCCCCEEEECEEECCC---C---------CCEEEEECCCCEEEEEECCCCCEEEEEECCCC--------------
T ss_conf 221112210001101000013---7---------98449990899899999999979899862347--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCC----EEEEEECCC
Q ss_conf 88988999753323445332223448999886781583448999-189816999----099973999
Q 000470 1320 RPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDL----KIRRWDHCS 1381 (1472)
Q Consensus 1320 ~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg----~IriWDl~~ 1381 (1472)
.+|...|++++|+|++ .+++|+.|| +|++||++.
T Consensus 302 ----------------------------~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 302 ----------------------------GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp ----------------------------GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ----------------------------CCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCC
T ss_conf ----------------------------898897899998799989999968999704899993899
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.6e-25 Score=177.04 Aligned_cols=223 Identities=9% Similarity=0.126 Sum_probs=157.2
Q ss_pred CCCEEEEEECCCCEEEEECCCCCCCCCCCC----CEEEECCCCCEEEEEEECC-----CCEEEEEECCCCEEEEECCCCC
Q ss_conf 997999992999799993998864421111----0587416973279999249-----9799999179949999801124
Q 000470 1069 DHSFFVSASDDSTVKVWDSRKLEKDISFRS----RLTYHLEGSRALCTMMLRH-----SAQVVVGACDGIIHMFSVDHIS 1139 (1472)
Q Consensus 1069 d~~~lvSgS~DGtVkIWD~~~~e~~~~~~s----~~t~~~~~~~I~~i~f~~~-----~~~las~s~DG~I~iwdi~~~~ 1139 (1472)
+..++++++.||+|++|++........... ......+...+.+++|.++ ++.+++++.||.+++|++....
T Consensus 78 ~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~ 157 (393)
T d1sq9a_ 78 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 157 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred CCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 87689999489919999822898205651245632431157896689998447886542179998389819998740477
Q ss_pred CCCCCC-CCCCC---CCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC----CCCCCC
Q ss_conf 688864-33468---5452330279985899997137998721999995897499995998986540004----787665
Q 000470 1140 RGLGNV-EKYSG---ISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA----IPEEGY 1211 (1472)
Q Consensus 1140 ~~~~~~-~~~~~---~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~----~~h~g~ 1211 (1472)
...... ..... ..........++..+.+++|+++ + ++++++.||.|++||+++++....++. ..|.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~ 233 (393)
T d1sq9a_ 158 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER---G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233 (393)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT---S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred CCCCEEEEEECCCEECCCCEECCCCCCCCEEEEEECCC---C-EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
T ss_conf 53410233103200014510002578986789997899---9-8999938982999860233211000011111242563
Q ss_pred EEEEEECCCCCEEEEEECCC---CEEEEECCCCCCCCEEEC------------CCCCCCEEEEEECCCCCCCCCCCCCCE
Q ss_conf 38999969998999993799---399997899951006741------------566772047842599997444689997
Q 000470 1212 VSSLVTGPCGNWFVSGSSRG---VLTLWDLRFLVPVNSWQY------------SQVCPIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1212 Itsi~~sp~g~~LvsGssdG---~I~lWDlR~~~~i~s~~~------------~~~~~I~~l~~~~p~~~~~~~s~~~~~ 1276 (1472)
|++++|+|++.+|++|+.|+ .+++||+.++.++..+.. +|...|++++| +|++. +
T Consensus 234 V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~f-spd~~---------~ 303 (393)
T d1sq9a_ 234 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF-NDSGE---------T 303 (393)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE-CSSSS---------E
T ss_pred EEECCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECC-CCCCC---------E
T ss_conf 8770046653201124289884210010353213444311566664310232023586660013-89888---------0
Q ss_pred EEEEECCCEEEEEECCCCEEEEEEECCCC
Q ss_conf 99998699499998688717789861358
Q 000470 1277 IYVAAGCNEVSLWNAENGSCHQVLRTANY 1305 (1472)
Q Consensus 1277 i~vas~dg~V~VWDl~tg~~~~~l~~~~~ 1305 (1472)
+++++.|+.|++||++++++.+++..+..
T Consensus 304 l~S~s~D~~v~vWd~~~g~~~~~l~gH~~ 332 (393)
T d1sq9a_ 304 LCSAGWDGKLRFWDVKTKERITTLNMHCD 332 (393)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred EEEECCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 69877999899999999979999988687
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=4.7e-25 Score=175.33 Aligned_cols=305 Identities=9% Similarity=-0.012 Sum_probs=183.9
Q ss_pred EEEECC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC--CEEEEECCCCC
Q ss_conf 899907-997999992999799993998864421111058741697327999924997999991799--49999801124
Q 000470 1063 EIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG--IIHMFSVDHIS 1139 (1472)
Q Consensus 1063 ~iafsp-d~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG--~I~iwdi~~~~ 1139 (1472)
.-.||| ||+++|+++. |.|.+||...+. .. ...|...|.+++|+|+++.+++++.++ .|++|+.+..
T Consensus 7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~------~~--~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~- 76 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTY------VL--KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG- 76 (360)
T ss_dssp EEEEEECGGGCEEEEET-TEEEEECTTSSB------EE--ECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC-
T ss_pred CCCCCCCCCCEEEEEEC-CEEEEEECCCCC------EE--ECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-
T ss_conf 05146889999999989-969999899994------89--916999888899989999999999289989999989999-
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECC
Q ss_conf 68886433468545233027998589999713799872199999589749999599898654000478766538999969
Q 000470 1140 RGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP 1219 (1472)
Q Consensus 1140 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp 1219 (1472)
..+.. ..+...+..+.|+|+ ++.+++++.++.+++||+.++.....+.. +...+.+++|+|
T Consensus 77 -------------~~~~~-~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp 137 (360)
T d1k32a3 77 -------------KAEKF-EENLGNVFAMGVDRN---GKFAVVANDRFEIMTVDLETGKPTVIERS--REAMITDFTISD 137 (360)
T ss_dssp -------------CEEEC-CCCCCSEEEEEECTT---SSEEEEEETTSEEEEEETTTCCEEEEEEC--SSSCCCCEEECT
T ss_pred -------------CEEEE-ECCCCEEEEEEECCC---CCCCCEECCCCCCCCCCCCCCCEEEEEEC--CCCCCCCHHHCC
T ss_conf -------------48875-089712774121145---43210001111100000122210000001--355202301213
Q ss_pred CCCEEEEEE----------CCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 998999993----------7993999978999510067415667720478425999974446899979999869949999
Q 000470 1220 CGNWFVSGS----------SRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1289 (1472)
Q Consensus 1220 ~g~~LvsGs----------sdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VW 1289 (1472)
+|.+|+.+. .++.+.+||+..+....... +...+..+.+ +|++. .+++++.++.+.+|
T Consensus 138 dg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~--~~~~~~~~~~-spdg~---------~l~~~s~~~~~~~~ 205 (360)
T d1k32a3 138 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT--ENSHDYAPAF-DADSK---------NLYYLSYRSLDPSP 205 (360)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC--SSSBEEEEEE-CTTSC---------EEEEEESCCCCCEE
T ss_pred CEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECC--CCCCCCCCCC-CCCCC---------EEEEEECCCCEECC
T ss_conf 225665212331211000256542663045571353035--4322110012-57799---------99999599855753
Q ss_pred ECCCCEEE-------EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCE
Q ss_conf 86887177-------89861358898766877632358898899975332344533222344899-------98867815
Q 000470 1290 NAENGSCH-------QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP-------PPRLLGIR 1355 (1472)
Q Consensus 1290 Dl~tg~~~-------~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~V~ 1355 (1472)
|....... ..+..... ......+.. ...... ............+..+... ..+...+.
T Consensus 206 d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
T d1k32a3 206 DRVVLNFSFEVVSKPFVIPLIPG----SPNPTKLVP---RSMTSE-AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277 (360)
T ss_dssp CSSSSCEECCSCBEEEEEESSTT----CCCGGGCCC---GGGSCC-CCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEE
T ss_pred CCCCCCEEECCCCCEEEEECCCC----CCCCCEECC---CCCCCC-CCCEEECCCCCCEEECCCCCCCEEEEEECCCCCE
T ss_conf 33544023203641179852469----601206877---767155-3113652665400101247675267541389856
Q ss_pred EECCCCCC----CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 83448999----18981699909997399999964971899889999840678605861999954058864012467887
Q 000470 1356 SLLPLPGG----DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1431 (1472)
Q Consensus 1356 sl~~~p~g----~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1431 (1472)
.+.+...+ ++++++.|+.|++||+.+++..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---------------------------------------------- 311 (360)
T d1k32a3 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT---------------------------------------------- 311 (360)
T ss_dssp EEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----------------------------------------------
T ss_pred EEEEEECCCCEEEEEECCCCCEEEEEECCCCEEE----------------------------------------------
T ss_conf 9999735997069996489987999979997498----------------------------------------------
Q ss_pred HHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 54201777887530458752206982899980894389839
Q 000470 1432 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1432 ~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
.|.+.|.+++ |++|+++|++++.||.|++|+
T Consensus 312 ---------~~~~~v~~~~-~SpDG~~l~~~~~Dg~i~v~d 342 (360)
T d1k32a3 312 ---------EVKNNLTDLR-LSADRKTVMVRKDDGKIYTFP 342 (360)
T ss_dssp ---------EEEEEEEEEE-ECTTSCEEEEEETTSCEEEEE
T ss_pred ---------EECCCCCEEE-ECCCCCEEEEEECCCEEEEEE
T ss_conf ---------8648868799-999898999997899499999
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.9e-24 Score=168.71 Aligned_cols=256 Identities=17% Similarity=0.173 Sum_probs=181.9
Q ss_pred CCCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 988555-6536345112345555899907997999992999799993998864421111058741697327999924997
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
-..|+. .|+++..|.+|.++|++++| ++++|+||+.||+|++|+...... ......+. .....+.....
T Consensus 37 i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~ 106 (293)
T d1p22a2 37 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM------LNTLIHHC--EAVLHLRFNNG 106 (293)
T ss_dssp EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE------EEEECCCC--SCEEEEECCTT
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCCCCCCCCCCCCCCCC------CCCCCCCC--CCCCCCCCCCC
T ss_conf 999999999199999267787763423--630021001110110000024641------00111111--00001111110
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99999179949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1120 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1120 ~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
.++++..++.+.+|+...... .........+...+....+... .+++++.|+.|++||+++++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~-----~~~~~s~d~~i~~~d~~~~~~ 170 (293)
T d1p22a2 107 MMVTCSKDRSIAVWDMASPTD-----------ITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWNTSTCEF 170 (293)
T ss_dssp EEEEEETTSCEEEEECSSSSC-----------CEEEEEECCCSSCEEEEEEETT-----EEEEEETTSEEEEEETTTCCE
T ss_pred CEEECCCCCCEEEEECCCCCC-----------CCCCCCCCCCCCCCCCCEECCC-----CCCCCCCCCCEEEECCCCCCE
T ss_conf 000013566306861344544-----------4212100011354311000002-----201106998604100788838
Q ss_pred CCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 54000478766538999969998999993799399997899951006741566772047842599997444689997999
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~v 1279 (1472)
...+.. +...+..+.++ +.++++|+.||.|++||++....+..+.. +...+... .+. ..++++
T Consensus 171 ~~~~~~--~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~---~~~---------~~~l~s 233 (293)
T d1p22a2 171 VRTLNG--HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCI---RFD---------NKRIVS 233 (293)
T ss_dssp EEEEEC--CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEE---ECC---------SSEEEE
T ss_pred EEEECC--CCCCCCCCCCC--CCEEEEECCCCEEEEEECCCCEEEEEECC-CCEEEEEC---CCC---------CEEEEE
T ss_conf 899715--54453221689--87588765899899986655614665214-31000001---454---------107999
Q ss_pred EECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 98699499998688717789861358898766877632358898899975332344533222344899988678158344
Q 000470 1280 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1359 (1472)
Q Consensus 1280 as~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1359 (1472)
++.|+.|.+||+.......... ....+....+|...|++++|
T Consensus 234 g~~dg~i~iwd~~~~~~~~~~~--------------------------------------~~~~~~~~~~H~~~V~~v~~ 275 (293)
T d1p22a2 234 GAYDGKIKVWDLVAALDPRAPA--------------------------------------GTLCLRTLVEHSGRVFRLQF 275 (293)
T ss_dssp EETTSCEEEEEHHHHTSTTSCT--------------------------------------TTTEEEEECCCSSCCCCEEE
T ss_pred ECCCCEEEEEECCCCCCCCCCC--------------------------------------CCEEEEEECCCCCCEEEEEE
T ss_conf 8679979999888886444567--------------------------------------75455784588998899997
Q ss_pred CCCCCEEECCCCCEEEEEE
Q ss_conf 8999189816999099973
Q 000470 1360 LPGGDLLTGGTDLKIRRWD 1378 (1472)
Q Consensus 1360 ~p~g~LiTgg~Dg~IriWD 1378 (1472)
++ ..++|||.|+.|++||
T Consensus 276 d~-~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 276 DE-FQIVSSSHDDTILIWD 293 (293)
T ss_dssp CS-SCEEECCSSSEEEEEC
T ss_pred CC-CEEEEEECCCEEEEEC
T ss_conf 19-9999992299899959
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.1e-24 Score=172.84 Aligned_cols=250 Identities=17% Similarity=0.195 Sum_probs=178.7
Q ss_pred CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 88555653634511234555589990799799999299979999399886442111105874169732799992499799
Q 000470 1042 SGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1121 (1472)
Q Consensus 1042 ~~W~p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~l 1121 (1472)
..|+... ...+|...|.+++++++ ..+++++.|+++++|+....+ .+..+.++.+.+++..+
T Consensus 34 ~~Wd~~~----~~~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~w~~~~~~-------------~~~~~~~~~~~~~~~~~ 95 (287)
T d1pgua2 34 MEWSSSS----MHQDHSNLIVSLDNSKA-QEYSSISWDDTLKVNGITKHE-------------FGSQPKVASANNDGFTA 95 (287)
T ss_dssp EETTTTE----EECCCCSCEEEEECCST-TCCEEEETTTEEEETTEEEEE-------------CSSCEEEEEECSSSEEE
T ss_pred EEEECCC----CCCCCCCCEEEEEECCC-CEEEEEEECCCCCCCCCCCCC-------------CCCCEEEEEECCCCCEE
T ss_conf 9998999----88887787899996599-728988610122211111111-------------12210146641678569
Q ss_pred EEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECC-CEEEEEECCCCCCC
Q ss_conf 99917994999980112468886433468545233027998589999713799872199999589-74999959989865
Q 000470 1122 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN-CGIHLWDTRSNSNT 1200 (1472)
Q Consensus 1122 as~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~d-g~I~iwDlrt~~~~ 1200 (1472)
++++ ++.+.+|+..... .+..... .....+ ++++ +..+++++.+ +.|++|++......
T Consensus 96 ~~~~-~~~~~~~~~~~~~-------------~~~~~~~--~~~~~~--~~~~---~~~~~v~~~~~~~v~~~~~~~~~~~ 154 (287)
T d1pgua2 96 VLTN-DDDLLILQSFTGD-------------IIKSVRL--NSPGSA--VSLS---QNYVAVGLEEGNTIQVFKLSDLEVS 154 (287)
T ss_dssp EEET-TSEEEEEETTTCC-------------EEEEEEC--SSCEEE--EEEC---SSEEEEEETTTSCEEEEETTEEEEE
T ss_pred EEEE-CCCCEEEECCCEE-------------EEEECCC--CCEEEE--EECC---CCCEEEECCCCCEEEEEECCCCCEE
T ss_conf 9960-3321000011003-------------5431012--220356--5214---7511100022100021000122100
Q ss_pred CEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCC-CCCCCCCCEEEE
Q ss_conf 4000478766538999969998999993799399997899951006741566772047842599997-444689997999
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA-AVSTTARPLIYV 1279 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~-~~~s~~~~~i~v 1279 (1472)
..+.. .+.+.+++++|+|++.+|++|+.+|.+++||++.+.........|..+|.++.+ +|.... .....++.++++
T Consensus 155 ~~~~~-~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~-~p~~~~~~~~~~~~~~l~s 232 (287)
T d1pgua2 155 FDLKT-PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW-KPAEKGANEEEIEEDLVAT 232 (287)
T ss_dssp EECSS-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEE-CCCC------CCSCCEEEE
T ss_pred EEEEE-CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE-CCCCCCCCCCCCCCCEEEE
T ss_conf 01210-247853699951676521101111110000002332110001111111100000-1365410012678870276
Q ss_pred EECCCEEEEEECCCCE-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 9869949999868871-778986135889876687763235889889997533234453322234489998867815834
Q 000470 1280 AAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1358 (1472)
Q Consensus 1280 as~dg~V~VWDl~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1358 (1472)
++.|+.|.+||++++. +...+ .+|...|+++.
T Consensus 233 gs~D~~i~iw~~~~~~~~~~~~-----------------------------------------------~~h~~~V~~v~ 265 (287)
T d1pgua2 233 GSLDTNIFIYSVKRPMKIIKAL-----------------------------------------------NAHKDGVNNLL 265 (287)
T ss_dssp EETTSCEEEEESSCTTCCEEET-----------------------------------------------TSSTTCEEEEE
T ss_pred ECCCCEEEEEECCCCCEEEEEE-----------------------------------------------CCCCCCEEEEE
T ss_conf 6499959998889997589992-----------------------------------------------78789858999
Q ss_pred CCCCCCEEECCCCCEEEEEEC
Q ss_conf 489991898169990999739
Q 000470 1359 PLPGGDLLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1359 ~~p~g~LiTgg~Dg~IriWDl 1379 (1472)
|++++.++|+|.|+.|++||+
T Consensus 266 ~~~~~~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 266 WETPSTLVSSGADACIKRWNV 286 (287)
T ss_dssp EEETTEEEEEETTSCEEEEEE
T ss_pred ECCCCEEEEEECCCEEEEEEE
T ss_conf 989998999979992999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.4e-24 Score=170.71 Aligned_cols=253 Identities=9% Similarity=0.047 Sum_probs=166.3
Q ss_pred EECCCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEC-CCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 4511234555589990799-7999992999799993998864421111058741-6973279999249979999917994
Q 000470 1052 AHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVVVGACDGI 1129 (1472)
Q Consensus 1052 ~~L~~H~~~V~~iafspd~-~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~-~~~~I~~i~f~~~~~~las~s~DG~ 1129 (1472)
....+|.++|++++|+|++ .++++|+.||+|++|+....... ..... +........+.++...+++++.|+.
T Consensus 50 ~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (342)
T d1yfqa_ 50 LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF------QALTNNEANLGICRICKYGDDKLIAASWDGL 123 (342)
T ss_dssp EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE------EECBSCCCCSCEEEEEEETTTEEEEEETTSE
T ss_pred EEECCCCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8855899988999995899978998126531145420443200------0001111111111111111111111012221
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECC-CCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEC-CC
Q ss_conf 999980112468886433468545233027-9985899997137998721999995897499995998986540004-78
Q 000470 1130 IHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA-IP 1207 (1472)
Q Consensus 1130 I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~-~~ 1207 (1472)
+++|+++....... ....... ..........+.+. +..++.++.++.|++||++.......... ..
T Consensus 124 ~~~wd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 191 (342)
T d1yfqa_ 124 IEVIDPRNYGDGVI---------AVKNLNSNNTKVKNKIFTMDTN---SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG 191 (342)
T ss_dssp EEEECHHHHTTBCE---------EEEESCSSSSSSCCCEEEEEEC---SSEEEEEESTTEEEEEESSCCTTCCCEEEECS
T ss_pred CCEEECCCCCCCEE---------EECCCCCCCCCCEEEEEEEECC---CCCEEEECCCCCEEEEECCCCCCCCEEEEECC
T ss_conf 11020234443302---------3000243001200000100016---87024651798478876056763411121025
Q ss_pred CCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCCCCEEE--------------CCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 766538999969-99899999379939999789995100674--------------156677204784259999744468
Q 000470 1208 EEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--------------YSQVCPIEKMCLFVPPPNAAVSTT 1272 (1472)
Q Consensus 1208 h~g~Itsi~~sp-~g~~LvsGssdG~I~lWDlR~~~~i~s~~--------------~~~~~~I~~l~~~~p~~~~~~~s~ 1272 (1472)
....+.+..+.+ ++..+++++.+|.+.+|+........... ..+...++++.+ +|.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-sp~~~------ 264 (342)
T d1yfqa_ 192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF-SPRHK------ 264 (342)
T ss_dssp CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE-CTTTC------
T ss_pred CCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEE-CCCCC------
T ss_conf 42210146763699987886548995999980598640111235125655531477762354315996-69844------
Q ss_pred CCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99979999869949999868871778986135889876687763235889889997533234453322234489998867
Q 000470 1273 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1352 (1472)
Q Consensus 1273 ~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1352 (1472)
++++|+.||.|.+||+.++++...+... +
T Consensus 265 ---~lasg~~Dg~v~vWD~~~~~~l~~~~~~----------------------------------------------~-- 293 (342)
T d1yfqa_ 265 ---FLYTAGSDGIISCWNLQTRKKIKNFAKF----------------------------------------------N-- 293 (342)
T ss_dssp ---CEEEEETTSCEEEEETTTTEEEEECCCC----------------------------------------------S--
T ss_pred ---EEEEECCCCEEEEEECCCCCEEEEECCC----------------------------------------------C--
T ss_conf ---7999879998999999989498870589----------------------------------------------9--
Q ss_pred CCEEECCCCCC-CEEECCCCCEEEEEECC
Q ss_conf 81583448999-18981699909997399
Q 000470 1353 GIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1380 (1472)
Q Consensus 1353 ~V~sl~~~p~g-~LiTgg~Dg~IriWDl~ 1380 (1472)
.+..+++++++ .++++++|..++.|...
T Consensus 294 ~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 294 EDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp SSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred CCEEEEEEECCCEEEEEECCCCEEEEEEE
T ss_conf 98799999479999999919927883012
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=3.5e-22 Score=156.70 Aligned_cols=326 Identities=10% Similarity=0.020 Sum_probs=188.1
Q ss_pred CCCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 988555-6536345112345555899907997999992999799993998864421111058741697327999924997
Q 000470 1041 DSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1041 ~~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
-..|+. +|++++.+..|. .+..++|||||+++++++.||+|++||+.+++.....+- .....|.+.+.+++|+|+++
T Consensus 44 v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i-~~~~~~~~~~~s~~~spDG~ 121 (426)
T d1hzua2 44 IALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-KIGIEARSVESSKFKGYEDR 121 (426)
T ss_dssp EEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-ECCSEEEEEEECCSTTCTTT
T ss_pred EEEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEE-ECCCCCCCEEEEEEECCCCC
T ss_conf 9999999995999996899-803899989999999995899889997568860489998-67888764588500268898
Q ss_pred EEEE-EECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC
Q ss_conf 9999-917994999980112468886433468545233027998589999713799872199999589749999599898
Q 000470 1120 QVVV-GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1120 ~las-~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~ 1198 (1472)
.+++ +..++.+.+||....... ....... ..+.......+.....+..+++. ...+......+.+..++.....
T Consensus 122 ~l~v~~~~~~~v~i~d~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~i~~s~d~--~~~~~~~~~~~~i~~~~~~~~~ 196 (426)
T d1hzua2 122 YTIAGAYWPPQFAIMDGETLEPK-QIVSTRG--MTVDTQTYHPEPRVAAIIASHEH--PEFIVNVKETGKVLLVNYKDID 196 (426)
T ss_dssp EEEEEEEESSEEEEEETTTCCEE-EEEECCE--ECSSSCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEECSSSS
T ss_pred EEEEEECCCCEEEEECCCCCCEE-EEEECCC--CCCCCEEECCCCCEEEEEECCCC--CEEEEECCCCCEEEEEEECCCC
T ss_conf 79996358976999857764125-7862267--77364364278850389987878--7888852789769999924665
Q ss_pred CCCEEECCCCCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCEEECCCCC-CCEEEEEECCCCCCCCCCCCCCE
Q ss_conf 654000478766538999969998999993-7993999978999510067415667-72047842599997444689997
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGS-SRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs-sdG~I~lWDlR~~~~i~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~~ 1276 (1472)
....-. ..+...+..+.++|++++++++. .+..+.+||...+..+..+...... +.....+..+.. +..
T Consensus 197 ~~~~~~-~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 267 (426)
T d1hzua2 197 NLTVTS-IGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY--------GPV 267 (426)
T ss_dssp SCEEEE-EECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTT--------EEE
T ss_pred CEEEEE-ECCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCC--------CCE
T ss_conf 204577-56677537613778886788642011000000025562788750587444342011006987--------745
Q ss_pred -EEEEECCCEEEEEECCCC-------EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -999986994999986887-------177898613588987668776323588988999753323445332223448999
Q 000470 1277 -IYVAAGCNEVSLWNAENG-------SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1277 -i~vas~dg~V~VWDl~tg-------~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
.+...+++.+.+|+.... ++...+ .
T Consensus 268 ~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l-----------------------------------------------~ 300 (426)
T d1hzua2 268 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-----------------------------------------------Q 300 (426)
T ss_dssp EEEECTTTCEEEEEECCTTTCTTTBTSEEEEE-----------------------------------------------E
T ss_pred EEECCCCCCEEEEEECCCCCCCCCCCEEEEEE-----------------------------------------------E
T ss_conf 77415789659885225665203302586898-----------------------------------------------6
Q ss_pred CCCCCCEEECCCCCC-CEE-------ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCC
Q ss_conf 886781583448999-189-------816999099973999999649718998899998406786058619999540588
Q 000470 1349 PRLLGIRSLLPLPGG-DLL-------TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQP 1420 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g-~Li-------Tgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~ 1420 (1472)
+|...+++++++|++ +++ +++.|++|++||+++++..+.+....
T Consensus 301 g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~---------------------------- 352 (426)
T d1hzua2 301 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA---------------------------- 352 (426)
T ss_dssp CSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH----------------------------
T ss_pred CCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCC----------------------------
T ss_conf 6887636787489986188850679880228879999898787670895021----------------------------
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEE-EEE----CCCCEEEECC
Q ss_conf 640124678875420177788753045875220698289-998----0894389839
Q 000470 1421 LTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLL-ISS----SRDGAIKVWK 1472 (1472)
Q Consensus 1421 ~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~L-vS~----s~DG~IkVWk 1472 (1472)
....+..|...|..++ |+++|+.+ +|+ +.||.|+||+
T Consensus 353 --------------~~~~~~~~~~rv~~~~-fSpDGk~i~vs~~~~~~~~~~i~v~D 394 (426)
T d1hzua2 353 --------------EWADLGEGAKRVVQPE-YNKRGDEVWFSVWNGKNDSSALVVVD 394 (426)
T ss_dssp --------------HHHCCCSSCCCEEEEE-ECSSSSEEEEEECCCTTSCCEEEEEE
T ss_pred --------------HHCCCCCCCCCEEEEE-ECCCCCEEEEEEECCCCCCCEEEEEE
T ss_conf --------------1025677885189879-99999999999724888898299999
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=5.4e-23 Score=161.92 Aligned_cols=305 Identities=11% Similarity=-0.035 Sum_probs=173.4
Q ss_pred CCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 85556536345112345555899907997999992999--7999939988644211110587416973279999249979
Q 000470 1043 GWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDS--TVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1043 ~W~p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DG--tVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~ 1120 (1472)
.|+..+..+..+ +|.+.|++++|+|||+++++++.|. .|++||..+++ ......|...+.+++|+|+++.
T Consensus 28 v~d~~~~~~~~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~-------~~~~~~~~~~v~~~~~spdg~~ 99 (360)
T d1k32a3 28 IQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-------AEKFEENLGNVFAMGVDRNGKF 99 (360)
T ss_dssp EECTTSSBEEEC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-------EEECCCCCCSEEEEEECTTSSE
T ss_pred EEECCCCCEEEC-CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC-------EEEEECCCCEEEEEEECCCCCC
T ss_conf 998999948991-69998888999899999999992899899999899994-------8875089712774121145432
Q ss_pred EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEE----------CCCEEE
Q ss_conf 9999179949999801124688864334685452330279985899997137998721999995----------897499
Q 000470 1121 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST----------QNCGIH 1190 (1472)
Q Consensus 1121 las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at----------~dg~I~ 1190 (1472)
+++++.++.+++|+++... .......+...+..+.|+|+ ++.++++. .++.++
T Consensus 100 l~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~spd---g~~la~~~~~~~~~~~~~~~~~~~ 162 (360)
T d1k32a3 100 AVVANDRFEIMTVDLETGK--------------PTVIERSREAMITDFTISDN---SRFIAYGFPLKHGETDGYVMQAIH 162 (360)
T ss_dssp EEEEETTSEEEEEETTTCC--------------EEEEEECSSSCCCCEEECTT---SCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCEECCCCCCCCCCCCCCC--------------EEEEEECCCCCCCCHHHCCC---EEEEEEECCCCCCCEEECCCCCEE
T ss_conf 1000111110000012221--------------00000013552023012132---256652123312110002565426
Q ss_pred EEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCC-CCC
Q ss_conf 9959989865400047876653899996999899999379939999789995100674156677204784259999-744
Q 000470 1191 LWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN-AAV 1269 (1472)
Q Consensus 1191 iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~-~~~ 1269 (1472)
+||+.+++...... +.+.+.+++|+|+|.+|++++.++.+.+||........ .....+..+.+ ++... ...
T Consensus 163 v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~ 234 (360)
T d1k32a3 163 VYDMEGRKIFAATT---ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF----EVVSKPFVIPL-IPGSPNPTK 234 (360)
T ss_dssp EEETTTTEEEECSC---SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC----CSCBEEEEEES-STTCCCGGG
T ss_pred EECCCCCCEEEECC---CCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEE----CCCCCEEEEEC-CCCCCCCCE
T ss_conf 63045571353035---43221100125779999999599855753335440232----03641179852-469601206
Q ss_pred CCCCCCEEEEEECC-----CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46899979999869-----9499998688717789861358898766877632358898899975332344533222344
Q 000470 1270 STTARPLIYVAAGC-----NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1270 ~s~~~~~i~vas~d-----g~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
++.++..+..+..+ ..+..+++..+........ ..+.. ....... .. ...............++++
T Consensus 235 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~------~~-~~~~~~~~~~~~~i~~~d~ 305 (360)
T d1k32a3 235 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL-ESSIL-IYSVPVH------GE-FAAYYQGAPEKGVLLKYDV 305 (360)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC-SSEEE-EEECCCC------CS-HHHHHHCCCCCEEEEEEET
T ss_pred ECCCCCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEC-CCCCE-EEEEEEC------CC-CEEEEEECCCCCEEEEEEC
T ss_conf 87776715531136526654001012476752675413-89856-9999735------99-7069996489987999979
Q ss_pred CC--CCCCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 89--99886781583448999-18981699909997399999964971
Q 000470 1345 NE--PPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1345 ~~--~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~ 1389 (1472)
.. ...+...|.+++|+||| ++++++.||.|++||+++++....+.
T Consensus 306 ~~~~~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~ 353 (360)
T d1k32a3 306 KTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353 (360)
T ss_dssp TTCCEEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECC
T ss_pred CCCEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEE
T ss_conf 997498864886879999989899999789949999999998545998
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.91 E-value=3.9e-21 Score=149.84 Aligned_cols=337 Identities=10% Similarity=-0.012 Sum_probs=180.9
Q ss_pred CCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 88555-65363451123455558999079979999929997999939988644211110587416973279999249979
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1120 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~ 1120 (1472)
..|+. +|++++.+..|. .+..++|||||+++++++.||+|++||+.+++..... .......+.+.+.+..|+|+++.
T Consensus 45 ~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~-~i~~~~~~~~~~~s~~~SpDG~~ 122 (432)
T d1qksa2 45 ALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA-EIKIGSEARSIETSKMEGWEDKY 122 (432)
T ss_dssp EEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE-EEECCSEEEEEEECCSTTCTTTE
T ss_pred EEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEE-EEECCCCCCCEEEECCCCCCCCE
T ss_conf 999899983999973799-7137998899999999828999789981089812889-98448898776984321888888
Q ss_pred E-EEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 9-999179949999801124688864334685452330279985899997137998721999995897499995998986
Q 000470 1121 V-VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1199 (1472)
Q Consensus 1121 l-as~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~ 1199 (1472)
+ ++++.++.|++||..+... ......... ...............+.+++++ ...+++...++.|.+||..+.+.
T Consensus 123 l~vs~~~~~~v~i~d~~t~~~-~~~~~~~~~--~~~~~~~~~~~~~~~v~~s~dg--~~~~vs~~~~~~i~~~d~~~~~~ 197 (432)
T d1qksa2 123 AIAGAYWPPQYVIMDGETLEP-KKIQSTRGM--TYDEQEYHPEPRVAAILASHYR--PEFIVNVKETGKILLVDYTDLNN 197 (432)
T ss_dssp EEEEEEETTEEEEEETTTCCE-EEEEECCEE--CTTTCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEETTCSSE
T ss_pred EEEECCCCCEEEEEECCCCCC-EEEECCCCC--CCCCEECCCCCCEEEEEECCCC--CEEEEEECCCCEEEEEECCCCCC
T ss_conf 999817898279990765542-254024776--4352201688850589987899--98999981688299998437875
Q ss_pred CCEEECCCCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCCCCEEECCCCCC--CEEEEEECCCCCCCCCCCCCCE
Q ss_conf 540004787665389999699989999937-9939999789995100674156677--2047842599997444689997
Q 000470 1200 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSS-RGVLTLWDLRFLVPVNSWQYSQVCP--IEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1200 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGss-dG~I~lWDlR~~~~i~s~~~~~~~~--I~~l~~~~p~~~~~~~s~~~~~ 1276 (1472)
...... .+...+..++++|+|+++++++. ++.+.+||.+.+..+.......... .....+..+. .++.
T Consensus 198 ~~~~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~g~~ 268 (432)
T d1qksa2 198 LKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT--------FGPV 268 (432)
T ss_dssp EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT--------TEEE
T ss_pred CEEEEE-CCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCC--------CCCE
T ss_conf 227998-3367542653889887999951666367776144526888721486224567664101489--------8831
Q ss_pred EEEE-ECCCEEEEEECCCCE-------EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999-869949999868871-------77898613588987668776323588988999753323445332223448999
Q 000470 1277 IYVA-AGCNEVSLWNAENGS-------CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1348 (1472)
Q Consensus 1277 i~va-s~dg~V~VWDl~tg~-------~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1348 (1472)
.... .+++.+.+|+..... ............. ..........++......
T Consensus 269 ~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~----------------------~~~s~p~~~~lw~~~~~~ 326 (432)
T d1qksa2 269 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL----------------------FIKTHPNSQYLYVDATLN 326 (432)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC----------------------CEECCTTCSEEEEECTTC
T ss_pred ECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEE----------------------EEEECCCCCCEEECCCCC
T ss_conf 0213568835876245665554656577799886899768----------------------887268864102112678
Q ss_pred CCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHH
Q ss_conf 886781583448999-1898169990999739999996497189988999984067860586199995405886401246
Q 000470 1349 PRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTA 1427 (1472)
Q Consensus 1349 ~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~ 1427 (1472)
.+.....++++ |++ .+.+++.|+.+++||+.+..
T Consensus 327 ~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~-------------------------------------------- 361 (432)
T d1qksa2 327 PEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA-------------------------------------------- 361 (432)
T ss_dssp SSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH--------------------------------------------
T ss_pred CCCCEEEEEEE-EECHHHCCCCCCCCEEECCCCCCC--------------------------------------------
T ss_conf 88770359999-962461045567844863343444--------------------------------------------
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEE-----CCCCEEEECC
Q ss_conf 78875420177788753045875220698289998-----0894389839
Q 000470 1428 KAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISS-----SRDGAIKVWK 1472 (1472)
Q Consensus 1428 ~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~-----s~DG~IkVWk 1472 (1472)
.+..|...+..++ |+++|+.++.+ +.+|.|+||+
T Consensus 362 ----------~l~~~~~~v~~~~-fS~DG~~v~~S~~~~~~~~g~i~i~D 400 (432)
T d1qksa2 362 ----------GITEGQPRVVQGE-FNKDGTEVWFSVWNGKDQESALVVVD 400 (432)
T ss_dssp ----------TCCSSCCEEEEEE-ECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred ----------CCCCCCCCEEEEE-ECCCCCEEEEEEECCCCCCCCEEEEE
T ss_conf ----------4578998689767-98999999999704888888689999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.89 E-value=8.7e-19 Score=134.58 Aligned_cols=260 Identities=12% Similarity=0.078 Sum_probs=181.7
Q ss_pred CCCCC-CCCEEEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 88555-653634511234555589990799799-9992999799993998864421111058741697327999924997
Q 000470 1042 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1119 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~~H~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~ 1119 (1472)
..|++ +|++++.+... +.+..++|+|||+++ ++++.++.|++||..+++ ...++..+.. +..+.|.+++.
T Consensus 15 ~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~------~~~~~~~~~~-~~~~~~~~~~~ 86 (301)
T d1l0qa2 15 SVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN------VIATVPAGSS-PQGVAVSPDGK 86 (301)
T ss_dssp EEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE------EEEEEECSSS-EEEEEECTTSS
T ss_pred EEEECCCCEEEEEEECC-CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCC------EEEEEECCCC-CCCCCCCCCCC
T ss_conf 99999999599999889-9836999928989999997899989999999894------1032000246-43110001111
Q ss_pred EEEE-EECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC
Q ss_conf 9999-917994999980112468886433468545233027998589999713799872199999589749999599898
Q 000470 1120 QVVV-GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1198 (1472)
Q Consensus 1120 ~las-~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~ 1198 (1472)
.+++ +..++.+.+|+..... ..... ..........+++++ ..+++.+..++.+.+||..+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~dg--~~~~~~~~~~~~~~~~~~~~~~ 149 (301)
T d1l0qa2 87 QVYVTNMASSTLSVIDTTSNT-------------VAGTV--KTGKSPLGLALSPDG--KKLYVTNNGDKTVSVINTVTKA 149 (301)
T ss_dssp EEEEEETTTTEEEEEETTTTE-------------EEEEE--ECSSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCCCCCCEEEECCCCCCE-------------EEEEC--CCCCCCEEEEEECCC--CEEEEEECCCCCEEEEECCCCC
T ss_conf 111111111001100124302-------------43202--444442378760589--7155420111100110001463
Q ss_pred CCCEEECCCCCCCEEEEEECCCCCEEEEEECC-CCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEE
Q ss_conf 65400047876653899996999899999379-93999978999510067415667720478425999974446899979
Q 000470 1199 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSR-GVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1277 (1472)
Q Consensus 1199 ~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssd-G~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1277 (1472)
....+.. ...+..++++|++..+++++.+ +.+.+|+............. ..+..+.+ .+++. .+
T Consensus 150 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~g~---------~~ 214 (301)
T d1l0qa2 150 VINTVSV---GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAV-NPEGT---------KA 214 (301)
T ss_dssp EEEEEEC---CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEE-CTTSS---------EE
T ss_pred EEEECCC---CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCC--CCCCEEEC-CCCCC---------CC
T ss_conf 0353156---7884288860465401310121111111111100011101335--77503110-11110---------11
Q ss_pred EEEEC---CCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99986---994999986887177898613588987668776323588988999753323445332223448999886781
Q 000470 1278 YVAAG---CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1354 (1472)
Q Consensus 1278 ~vas~---dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1354 (1472)
+++.. ++.|.+||..++++...+... ..+
T Consensus 215 ~v~~~~~~~~~v~v~D~~t~~~~~~~~~~------------------------------------------------~~~ 246 (301)
T d1l0qa2 215 YVTNVDKYFNTVSMIDTGTNKITARIPVG------------------------------------------------PDP 246 (301)
T ss_dssp EEEEECSSCCEEEEEETTTTEEEEEEECC------------------------------------------------SSE
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEECCC------------------------------------------------CCE
T ss_conf 11002100002323656998199998489------------------------------------------------987
Q ss_pred EEECCCCCC-CE-EECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 583448999-18-981699909997399999964971
Q 000470 1355 RSLLPLPGG-DL-LTGGTDLKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1355 ~sl~~~p~g-~L-iTgg~Dg~IriWDl~~~~~s~vi~ 1389 (1472)
++++++|+| ++ ++++.|++|++||+++++....+.
T Consensus 247 ~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 247 AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEE
T ss_conf 7999918989999998999969999999995999996
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.87 E-value=4.7e-18 Score=129.82 Aligned_cols=261 Identities=13% Similarity=0.132 Sum_probs=182.3
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 99999299979999399886442111105874169732799992499799-99917994999980112468886433468
Q 000470 1072 FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV-VVGACDGIIHMFSVDHISRGLGNVEKYSG 1150 (1472)
Q Consensus 1072 ~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~l-as~s~DG~I~iwdi~~~~~~~~~~~~~~~ 1150 (1472)
.+|+++.|++|.+||+.+++ ...++... .....++|+|+++.+ ++++.++.|++||+.+..
T Consensus 4 ~yV~~~~~~~v~v~D~~t~~------~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~----------- 65 (301)
T d1l0qa2 4 AYIANSESDNISVIDVTSNK------VTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----------- 65 (301)
T ss_dssp EEEEETTTTEEEEEETTTTE------EEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-----------
T ss_pred EEEEECCCCEEEEEECCCCE------EEEEEECC-CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCC-----------
T ss_conf 99997899989999999995------99999889-9836999928989999997899989999999894-----------
Q ss_pred CCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEE-EEEC
Q ss_conf 545233027998589999713799872199999589749999599898654000478766538999969998999-9937
Q 000470 1151 ISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFV-SGSS 1229 (1472)
Q Consensus 1151 ~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~Lv-sGss 1229 (1472)
.+..... +.. ...+.+++++ ...++++..++.+.+||..+++....+.. ...+.+++++|++..++ ++..
T Consensus 66 --~~~~~~~-~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dg~~~~~~~~~ 136 (301)
T d1l0qa2 66 --VIATVPA-GSS-PQGVAVSPDG--KQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNNG 136 (301)
T ss_dssp --EEEEEEC-SSS-EEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETT
T ss_pred --EEEEEEC-CCC-CCCCCCCCCC--CCCCCCCCCCCEEEECCCCCCEEEEECCC---CCCCEEEEEECCCCEEEEEECC
T ss_conf --1032000-246-4311000111--11111111110011001243024320244---4442378760589715542011
Q ss_pred CCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC-CCEEEEEECCCCEEEEEEECCCCCCC
Q ss_conf 99399997899951006741566772047842599997444689997999986-99499998688717789861358898
Q 000470 1230 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNEVSLWNAENGSCHQVLRTANYDGD 1308 (1472)
Q Consensus 1230 dG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~-dg~V~VWDl~tg~~~~~l~~~~~~~~ 1308 (1472)
++.+.+||......+...... ..+..+.+ +|+.. .++++.. .+.+.+|+..............
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 200 (301)
T d1l0qa2 137 DKTVSVINTVTKAVINTVSVG--RSPKGIAV-TPDGT---------KVYVANFDSMSISVIDTVTNSVIDTVKVEA---- 200 (301)
T ss_dssp TTEEEEEETTTTEEEEEEECC--SSEEEEEE-CTTSS---------EEEEEETTTTEEEEEETTTTEEEEEEECSS----
T ss_pred CCCEEEEECCCCCEEEECCCC--CCCEEEEE-ECCCC---------CEEEECCCCCCCCCCCCCCEEEEECCCCCC----
T ss_conf 110011000146303531567--88428886-04654---------013101211111111111000111013357----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CE-E--ECCCCCEEEEEECCCCCC
Q ss_conf 7668776323588988999753323445332223448999886781583448999-18-9--816999099973999999
Q 000470 1309 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DL-L--TGGTDLKIRRWDHCSPGR 1384 (1472)
Q Consensus 1309 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~L-i--Tgg~Dg~IriWDl~~~~~ 1384 (1472)
....+.+.+++ .+ + .++.++.|++||+.+++.
T Consensus 201 --------------------------------------------~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~ 236 (301)
T d1l0qa2 201 --------------------------------------------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (301)
T ss_dssp --------------------------------------------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred --------------------------------------------CCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEE
T ss_conf --------------------------------------------750311011110111100210000232365699819
Q ss_pred CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEE-EEEC
Q ss_conf 649718998899998406786058619999540588640124678875420177788753045875220698289-9980
Q 000470 1385 SYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLL-ISSS 1463 (1472)
Q Consensus 1385 s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~L-vS~s 1463 (1472)
...+. +...+.+++ |++++++| ++++
T Consensus 237 ~~~~~----------------------------------------------------~~~~~~~va-~spdg~~l~va~~ 263 (301)
T d1l0qa2 237 TARIP----------------------------------------------------VGPDPAGIA-VTPDGKKVYVALS 263 (301)
T ss_dssp EEEEE----------------------------------------------------CCSSEEEEE-ECTTSSEEEEEET
T ss_pred EEEEC----------------------------------------------------CCCCEEEEE-EECCCCEEEEEEC
T ss_conf 99984----------------------------------------------------899877999-9189899999989
Q ss_pred CCCEEEECC
Q ss_conf 894389839
Q 000470 1464 RDGAIKVWK 1472 (1472)
Q Consensus 1464 ~DG~IkVWk 1472 (1472)
.||.|+||+
T Consensus 264 ~~~~i~v~D 272 (301)
T d1l0qa2 264 FCNTVSVID 272 (301)
T ss_dssp TTTEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 999699999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=1.3e-18 Score=133.43 Aligned_cols=271 Identities=11% Similarity=0.051 Sum_probs=157.4
Q ss_pred EEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCC-----------EEEEEEECCC
Q ss_conf 34511234555589990799799-99929997999939988644211110587416973-----------2799992499
Q 000470 1051 VAHLQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR-----------ALCTMMLRHS 1118 (1472)
Q Consensus 1051 V~~L~~H~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~-----------I~~i~f~~~~ 1118 (1472)
+....+|.+.+.+++|+|||+++ ++++.++++++||...++. ......+... ...+.+++++
T Consensus 101 i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~ 174 (426)
T d1hzua2 101 IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 174 (426)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE------EEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred EECCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCE------EEEEECCCCCCCCEEECCCCCEEEEEECCCC
T ss_conf 8678887645885002688987999635897699985776412------5786226777364364278850389987878
Q ss_pred CEEEEEEC-CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEE-EECCCEEEEEECCC
Q ss_conf 79999917-99499998011246888643346854523302799858999971379987219999-95897499995998
Q 000470 1119 AQVVVGAC-DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMY-STQNCGIHLWDTRS 1196 (1472)
Q Consensus 1119 ~~las~s~-DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~-at~dg~I~iwDlrt 1196 (1472)
..++.+.. .+.+.+++... ...........+.....+.++++ +++++. ...+..+.++|..+
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~a~~~~~~~~~~~~~~ 238 (426)
T d1hzua2 175 PEFIVNVKETGKVLLVNYKD-------------IDNLTVTSIGAAPFLADGGWDSS---HRYFMTAANNSNKVAVIDSKD 238 (426)
T ss_dssp SEEEEEETTTTEEEEEECSS-------------SSSCEEEEEECCSSEEEEEECTT---SCEEEEEETTCSEEEEEETTT
T ss_pred CEEEEECCCCCEEEEEEECC-------------CCCEEEEEECCCCCCEEEEECCC---CCEEEEEEECCCCEEEEECCC
T ss_conf 78888527897699999246-------------65204577566775376137788---867886420110000000255
Q ss_pred CCCCCEEECCCCCCCEEEEEECCCC---CEEEEEECCCCEEEEECCCC-------CCCCEEECCCCCCCEEEEEECCCCC
Q ss_conf 9865400047876653899996999---89999937993999978999-------5100674156677204784259999
Q 000470 1197 NSNTWTLKAIPEEGYVSSLVTGPCG---NWFVSGSSRGVLTLWDLRFL-------VPVNSWQYSQVCPIEKMCLFVPPPN 1266 (1472)
Q Consensus 1197 ~~~~~~l~~~~h~g~Itsi~~sp~g---~~LvsGssdG~I~lWDlR~~-------~~i~s~~~~~~~~I~~l~~~~p~~~ 1266 (1472)
++.........+........+...+ .+.+....++.+.+|+.... .....+. .+...+..+.+ +|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~-g~~~~v~~v~~-sPdg~ 316 (426)
T d1hzua2 239 RRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKT-HPKSS 316 (426)
T ss_dssp TEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEE-CSSSCCCCEEC-CTTCS
T ss_pred CCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEE-CCCCCEEEEEC-CCCCC
T ss_conf 62788750587444342011006987745774157896598852256652033025868986-68876367874-89986
Q ss_pred CCCCCCCCCEEEEE-------ECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 74446899979999-------86994999986887177898613588987668776323588988999753323445332
Q 000470 1267 AAVSTTARPLIYVA-------AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1339 (1472)
Q Consensus 1267 ~~~~s~~~~~i~va-------s~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1339 (1472)
++++. ..++.|.|||+.++++...+.....
T Consensus 317 ---------~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~---------------------------------- 353 (426)
T d1hzua2 317 ---------HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE---------------------------------- 353 (426)
T ss_dssp ---------EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH----------------------------------
T ss_pred ---------EEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCH----------------------------------
T ss_conf ---------1888506798802288799998987876708950211----------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCC-E-EEC----CCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 2234489998867815834489991-8-981----699909997399999964971899
Q 000470 1340 RVDELNEPPPRLLGIRSLLPLPGGD-L-LTG----GTDLKIRRWDHCSPGRSYCICGPN 1392 (1472)
Q Consensus 1340 ~~~~l~~~~~~~~~V~sl~~~p~g~-L-iTg----g~Dg~IriWDl~~~~~s~vi~g~~ 1392 (1472)
......+...|..+.|+|+|. + +++ +.|+.|++||..+.+...++.|..
T Consensus 354 ----~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 354 ----WADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp ----HHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred ----HCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCC
T ss_conf ----0256778851898799999999999972488889829999999873899987898
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.86 E-value=1.4e-18 Score=133.16 Aligned_cols=154 Identities=12% Similarity=0.077 Sum_probs=100.5
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 799999299979999399886442111105874169732799992499799-9991799499998011246888643346
Q 000470 1071 SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV-VVGACDGIIHMFSVDHISRGLGNVEKYS 1149 (1472)
Q Consensus 1071 ~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~l-as~s~DG~I~iwdi~~~~~~~~~~~~~~ 1149 (1472)
+|+++++.|++|+|||..+++... ......++..+.+++|+|+++.+ ++++.+|.|.+||+.+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~----~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~---------- 67 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDK----VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE---------- 67 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE----EEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC----------
T ss_pred EEEEEECCCCEEEEEECCCCEEEE----EEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC----------
T ss_conf 699997679989999999994999----998778899823799999989999997899949999999992----------
Q ss_pred CCCCCEEECCCC----CCEEEEEEECCCCCCCEEEEEEE------------CCCEEEEEECCCCCCCCEEECCCCCCCEE
Q ss_conf 854523302799----85899997137998721999995------------89749999599898654000478766538
Q 000470 1150 GISDIKKKDTKE----GAIVTLVNYNTDNCASHMFMYST------------QNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1213 (1472)
Q Consensus 1150 ~~~~~~~~~~~~----~~~v~~~~~~~d~~s~~~Lv~at------------~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1213 (1472)
.+....... +.....+.++++ +..++.+. .++.+.+||..++.....+.. .+.+.
T Consensus 68 ---~~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~ 138 (337)
T d1pbyb_ 68 ---TLGRIDLSTPEERVKSLFGAALSPD---GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQIT 138 (337)
T ss_dssp ---EEEEEECCBTTEEEECTTCEEECTT---SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCC
T ss_pred ---EEEEEECCCCCCCCCCEEEEEECCC---CCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCC---CCCCE
T ss_conf ---9888724777312540254898687---75799950477620342034555212035667759884145---68721
Q ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC
Q ss_conf 999969998999993799399997899951006741
Q 000470 1214 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY 1249 (1472)
Q Consensus 1214 si~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~ 1249 (1472)
+++++|++.++++++. .+.+||...+.....+..
T Consensus 139 ~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~ 172 (337)
T d1pbyb_ 139 MLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp CEEECTTSSCEEEESS--SEEEEETTTTEEEEEECS
T ss_pred EEEECCCCCEEEEECC--CCCEEEEECCCEEEEEEC
T ss_conf 8998688888999717--750566303727888614
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.85 E-value=1.4e-19 Score=139.72 Aligned_cols=281 Identities=10% Similarity=0.013 Sum_probs=161.4
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEC-CCCCEEEEEEECCCCEEE-EEECCCCEEEEECCCCCCC
Q ss_conf 99907997999992999799993998864421111058741-697327999924997999-9917994999980112468
Q 000470 1064 IAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVV-VGACDGIIHMFSVDHISRG 1141 (1472)
Q Consensus 1064 iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~-~~~~I~~i~f~~~~~~la-s~s~DG~I~iwdi~~~~~~ 1141 (1472)
++|+++++++++++.|++|.+||+.+.+ ...++.. ++..+.+++|+|+++.++ +++.++.|.+||+.+...
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~------~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~- 74 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDT------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN- 74 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTE------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCC------EEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEE-
T ss_conf 5588999699998699979999999998------999999489997045999789899999978999399996756713-
Q ss_pred CCCCCCCCCCCCCEEECC--CCC---CEEEEEEECCCCCCCEEEEEEE------------CCCEEEEEECCCCCCCCEEE
Q ss_conf 886433468545233027--998---5899997137998721999995------------89749999599898654000
Q 000470 1142 LGNVEKYSGISDIKKKDT--KEG---AIVTLVNYNTDNCASHMFMYST------------QNCGIHLWDTRSNSNTWTLK 1204 (1472)
Q Consensus 1142 ~~~~~~~~~~~~~~~~~~--~~~---~~v~~~~~~~d~~s~~~Lv~at------------~dg~I~iwDlrt~~~~~~l~ 1204 (1472)
+..... ... .....+.++++ |..++++. .++.+.+||..+++....+.
T Consensus 75 ------------~~~~~~~~~~~~~~~~~~~v~~s~D---G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 139 (346)
T d1jmxb_ 75 ------------TFHANLSSVPGEVGRSMYSFAISPD---GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 139 (346)
T ss_dssp ------------EEEEESCCSTTEEEECSSCEEECTT---SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred ------------EEEECCCCCCCCCCCCEEEEEEECC---CCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEE
T ss_conf ------------1231036543454774179999058---8889997057752156514676248998525632656887
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCC-CCCCCC--------
Q ss_conf 47876653899996999899999379939999789995100674156677204784259999744-468999--------
Q 000470 1205 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV-STTARP-------- 1275 (1472)
Q Consensus 1205 ~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~-~s~~~~-------- 1275 (1472)
.......+..+.+.+++..++. ++.+.+||...+..+..+.... ....+.+ +|...... ......
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 213 (346)
T d1jmxb_ 140 TFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPLRN--WNRKGYS-APDVLYFWPHQSPRHEFSMLYTI 213 (346)
T ss_dssp EEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECSTT--CCCTTBC-CCBCCCCCCCCCTTCEEEEEEEE
T ss_pred EEECCCCEEEEEECCCCEEEEE---CCCCEEEECCCCCEEEEEECCC--CCCCEEE-ECCCCEEEEEECCCCCEEEEEEE
T ss_conf 3102474399995278789984---7962699806997899996489--8662377-12552899986499816765123
Q ss_pred --------EEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --------799998699499998688717789861358898766877632358898899975332344533222344899
Q 000470 1276 --------LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1347 (1472)
Q Consensus 1276 --------~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 1347 (1472)
.+..+.....+.+||..++........
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 248 (346)
T d1jmxb_ 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA--------------------------------------------- 248 (346)
T ss_dssp EEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------------------------------------------
T ss_pred EEECCCCEEEEECCCCCEEEEEECCCCCEEEEEEE---------------------------------------------
T ss_conf 11126732575404783499997778836878763---------------------------------------------
Q ss_pred CCCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
Q ss_conf 9886781583448999-189816999099973999999649718998899998406786058619999540588640124
Q 000470 1348 PPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLT 1426 (1472)
Q Consensus 1348 ~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~ 1426 (1472)
.+...+.++.+.+++ .++. ..++.|++||..+.+....+.
T Consensus 249 -~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~d~~~~~~~~~~~------------------------------------- 289 (346)
T d1jmxb_ 249 -DLTELYFTGLRSPKDPNQIY-GVLNRLAKYDLKQRKLIKAAN------------------------------------- 289 (346)
T ss_dssp -ECSSCEEEEEECSSCTTEEE-EEESEEEEEETTTTEEEEEEE-------------------------------------
T ss_pred -CCCCEEEEEEEECCCCEEEE-ECCCEEEEEECCCCCEEEEEC-------------------------------------
T ss_conf -15660688897179978999-429838999899993999974-------------------------------------
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 6788754201777887530458752206982899980894389839
Q 000470 1427 AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1427 ~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvS~s~DG~IkVWk 1472 (1472)
+...+.+++ |+++++.|++++.||.|+||+
T Consensus 290 ---------------~~~~~~~va-~s~DG~~l~v~~~d~~v~v~D 319 (346)
T d1jmxb_ 290 ---------------LDHTYYCVA-FDKKGDKLYLGGTFNDLAVFN 319 (346)
T ss_dssp ---------------CSSCCCEEE-ECSSSSCEEEESBSSEEEEEE
T ss_pred ---------------CCCCEEEEE-ECCCCCEEEEEECCCCEEEEE
T ss_conf ---------------999778999-968999999994899299999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=7.8e-18 Score=128.38 Aligned_cols=207 Identities=13% Similarity=0.054 Sum_probs=140.5
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCC
Q ss_conf 07997999992999799993998864421111058741697327999924997999991799499998011246888643
Q 000470 1067 SHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVE 1146 (1472)
Q Consensus 1067 spd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iwdi~~~~~~~~~~~ 1146 (1472)
++++-++++.+.||+|.|||..+++ ...++..+. .+..++|+|+++.+++++.||.|++||+.+...
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~~------v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~------ 95 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTYE------IKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------ 95 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCC------EEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------
T ss_pred CCCCEEEEEECCCCEEEEEECCCCC------EEEEEECCC-CEEEEEECCCCCEEEEECCCCCEEEEEEECCCC------
T ss_conf 8782899997699979999899983------999973799-713799889999999982899978998108981------
Q ss_pred CCCCCCCCEEECC--CCCCEEEEEEECCCCCCCEE-EEEEECCCEEEEEECCCCCCCCEEECC---------CCCCCEEE
Q ss_conf 3468545233027--99858999971379987219-999958974999959989865400047---------87665389
Q 000470 1147 KYSGISDIKKKDT--KEGAIVTLVNYNTDNCASHM-FMYSTQNCGIHLWDTRSNSNTWTLKAI---------PEEGYVSS 1214 (1472)
Q Consensus 1147 ~~~~~~~~~~~~~--~~~~~v~~~~~~~d~~s~~~-Lv~at~dg~I~iwDlrt~~~~~~l~~~---------~h~g~Its 1214 (1472)
........ .+...+....|+|| |+. ++++..++.|.+||..+++....+... .+.+....
T Consensus 96 -----~~~~~i~~~~~~~~~~~s~~~SpD---G~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (432)
T d1qksa2 96 -----TTVAEIKIGSEARSIETSKMEGWE---DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 167 (432)
T ss_dssp -----CEEEEEECCSEEEEEEECCSTTCT---TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred -----EEEEEEECCCCCCCEEEECCCCCC---CCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEE
T ss_conf -----288998448898776984321888---888999817898279990765542254024776435220168885058
Q ss_pred EEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC-CCEEEEEECC
Q ss_conf 999699989-99993799399997899951006741566772047842599997444689997999986-9949999868
Q 000470 1215 LVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNEVSLWNAE 1292 (1472)
Q Consensus 1215 i~~sp~g~~-LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~-dg~V~VWDl~ 1292 (1472)
+.++|++.. +++...+|.+.+||.........+..+....++.+.+ +|++. ++++++. ++.+.+||..
T Consensus 168 v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~-spdg~---------~~~va~~~~~~v~v~d~~ 237 (432)
T d1qksa2 168 ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGL-DGSHR---------YFITAANARNKLVVIDTK 237 (432)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE-CTTSC---------EEEEEEGGGTEEEEEETT
T ss_pred EEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE-CCCCC---------EEEEECCCCCEEEEEECC
T ss_conf 99878999899998168829999843787522799833675426538-89887---------999951666367776144
Q ss_pred CCEEEEEEECCC
Q ss_conf 871778986135
Q 000470 1293 NGSCHQVLRTAN 1304 (1472)
Q Consensus 1293 tg~~~~~l~~~~ 1304 (1472)
+++....+....
T Consensus 238 ~~~~~~~~~~g~ 249 (432)
T d1qksa2 238 EGKLVAIEDTGG 249 (432)
T ss_dssp TTEEEEEEECSS
T ss_pred CCEEEEEECCCC
T ss_conf 526888721486
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=1.5e-17 Score=126.54 Aligned_cols=267 Identities=8% Similarity=-0.039 Sum_probs=164.5
Q ss_pred CCCCC-CCCEEEECCCC--CCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC
Q ss_conf 88555-65363451123--4555589990799799-99929997999939988644211110587416973279999249
Q 000470 1042 SGWRP-RGILVAHLQEH--CSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1117 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~~H--~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~ 1117 (1472)
..|+. ++.+++.+..+ ...+..++|+|||+++ ++++.||.|.+||+.+++........ ....+...+..++|+++
T Consensus 14 ~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~~~~~~~v~~s~d 92 (337)
T d1pbyb_ 14 VVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS-TPEERVKSLFGAALSPD 92 (337)
T ss_dssp EEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC-BTTEEEECTTCEEECTT
T ss_pred EEEECCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECC-CCCCCCCCEEEEEECCC
T ss_conf 99999999499999877889982379999998999999789994999999999298887247-77312540254898687
Q ss_pred CCEEEEEEC------------CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEC
Q ss_conf 979999917------------99499998011246888643346854523302799858999971379987219999958
Q 000470 1118 SAQVVVGAC------------DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ 1185 (1472)
Q Consensus 1118 ~~~las~s~------------DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~ 1185 (1472)
++.++++.. ++.+.+|+..+.. ...... ....+..+.++++ +..+++++.
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------------~~~~~~--~~~~~~~~~~s~d---g~~l~~~~~ 154 (337)
T d1pbyb_ 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-------------RRKAFE--APRQITMLAWARD---GSKLYGLGR 154 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-------------EEEEEE--CCSSCCCEEECTT---SSCEEEESS
T ss_pred CCEEEEEECCCCCEEEECCCCCCCEEECCCCCCE-------------EEEECC--CCCCCEEEEECCC---CCEEEEECC
T ss_conf 7579995047762034203455521203566775-------------988414--5687218998688---888999717
Q ss_pred CCEEEEEECCCCCCCCEEECCCCCC---------------------CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 9749999599898654000478766---------------------5389999699989999937993999978999510
Q 000470 1186 NCGIHLWDTRSNSNTWTLKAIPEEG---------------------YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPV 1244 (1472)
Q Consensus 1186 dg~I~iwDlrt~~~~~~l~~~~h~g---------------------~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i 1244 (1472)
.+.+||..+++....+....... .........+......++.++.+.+||+..+...
T Consensus 155 --~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (337)
T d1pbyb_ 155 --DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp --SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred --CCCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCEE
T ss_conf --750566303727888614775433113577631401466531246632444103660454036761799986888588
Q ss_pred CEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 06741566772047842599997444689997999986994999986887177898613588987668776323588988
Q 000470 1245 NSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSR 1324 (1472)
Q Consensus 1245 ~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 1324 (1472)
.....++......+.+ .|... .+++ .++.+.+||+.++++...+...
T Consensus 233 ~~~~~~~~~~~~~~~~-~~~~~---------~~~~--~~~~i~v~d~~~~~~~~~~~~~--------------------- 279 (337)
T d1pbyb_ 233 MREVRIMDVFYFSTAV-NPAKT---------RAFG--AYNVLESFDLEKNASIKRVPLP--------------------- 279 (337)
T ss_dssp EEEEEECSSCEEEEEE-CTTSS---------EEEE--EESEEEEEETTTTEEEEEEECS---------------------
T ss_pred EEEECCCCCCEEEEEE-CCCCE---------EEEE--CCCCEEEEECCCCCEEEEECCC---------------------
T ss_conf 8983288750588874-26613---------9997--3552899989889699997489---------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 999753323445332223448999886781583448999-18981699909997399999964971
Q 000470 1325 SNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1325 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~ 1389 (1472)
..+.+++|+|+| .+++++.|+.|++||..+.+....+.
T Consensus 280 ---------------------------~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~ 318 (337)
T d1pbyb_ 280 ---------------------------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ---------------------------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ---------------------------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE
T ss_conf ---------------------------988999997899999999499929999999876989998
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.78 E-value=1.2e-17 Score=127.07 Aligned_cols=270 Identities=10% Similarity=-0.058 Sum_probs=165.4
Q ss_pred CCCCC-CCCEEEECC-CCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
Q ss_conf 88555-653634511-234555589990799799-999299979999399886442111105874169732799992499
Q 000470 1042 SGWRP-RGILVAHLQ-EHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1118 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~-~H~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~ 1118 (1472)
..|+. +++++..+. .|...+.+++|+||++++ ++++.++.|.+||..+++.................+..++|++++
T Consensus 21 ~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG 100 (346)
T d1jmxb_ 21 HVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG 100 (346)
T ss_dssp EEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred EEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
T ss_conf 99999999899999948999704599978989999997899939999675671312310365434547741799990588
Q ss_pred CEEEEEEC------------CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECC
Q ss_conf 79999917------------994999980112468886433468545233027998589999713799872199999589
Q 000470 1119 AQVVVGAC------------DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1186 (1472)
Q Consensus 1119 ~~las~s~------------DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~d 1186 (1472)
+.+++++. ++.+.+|+..+... ...+.... .+..+....+.++ +.+++. +
T Consensus 101 ~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~---~~~~~~---~ 162 (346)
T d1jmxb_ 101 KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE----------AKPVRTFP--MPRQVYLMRAADD---GSLYVA---G 162 (346)
T ss_dssp SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG----------BCCSEEEE--CCSSCCCEEECTT---SCEEEE---S
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEEECCCCEE----------EEEEEEEE--CCCCEEEEEECCC---CEEEEE---C
T ss_conf 8899970577521565146762489985256326----------56887310--2474399995278---789984---7
Q ss_pred CEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCC--------------------------CEEEEEECCCCEEEEECCC
Q ss_conf 74999959989865400047876653899996999--------------------------8999993799399997899
Q 000470 1187 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG--------------------------NWFVSGSSRGVLTLWDLRF 1240 (1472)
Q Consensus 1187 g~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g--------------------------~~LvsGssdG~I~lWDlR~ 1240 (1472)
+.+.+||+.+++....+.. ...+..+.++|++ ..+.++..++.+.+||+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
T d1jmxb_ 163 PDIYKMDVKTGKYTVALPL---RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239 (346)
T ss_dssp SSEEEECTTTCCEEEEECS---TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred CCCEEEECCCCCEEEEEEC---CCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCC
T ss_conf 9626998069978999964---8986623771255289998649981676512311126732575404783499997778
Q ss_pred CCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 95100674156677204784259999744468999799998699499998688717789861358898766877632358
Q 000470 1241 LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFAR 1320 (1472)
Q Consensus 1241 ~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~ 1320 (1472)
+........++...+..+.+ .+... .++.. ..+.+.+||..+++....+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~-~~~~v~v~d~~~~~~~~~~~~~----------------- 291 (346)
T d1jmxb_ 240 GKTHTQEFADLTELYFTGLR-SPKDP---------NQIYG-VLNRLAKYDLKQRKLIKAANLD----------------- 291 (346)
T ss_dssp CCEEEEEEEECSSCEEEEEE-CSSCT---------TEEEE-EESEEEEEETTTTEEEEEEECS-----------------
T ss_pred CCEEEEEEECCCCEEEEEEE-ECCCC---------EEEEE-CCCEEEEEECCCCCEEEEECCC-----------------
T ss_conf 83687876315660688897-17997---------89994-2983899989999399997499-----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCEEEEEECCCCCCCEEEECC
Q ss_conf 8988999753323445332223448999886781583448999-1898169990999739999996497189
Q 000470 1321 PSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGP 1391 (1472)
Q Consensus 1321 p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl~~~~~s~vi~g~ 1391 (1472)
..+++++|+|+| .+++++.|+.|++||.++.+....+.-+
T Consensus 292 -------------------------------~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p 332 (346)
T d1jmxb_ 292 -------------------------------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332 (346)
T ss_dssp -------------------------------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred -------------------------------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC
T ss_conf -------------------------------97789999689999999948992999999658797999889
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=8.4e-16 Score=115.17 Aligned_cols=170 Identities=11% Similarity=0.098 Sum_probs=89.5
Q ss_pred CCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEC-CCCEE
Q ss_conf 11234555589990799799-99929997999939988644211110587416973279999249979999917-99499
Q 000470 1054 LQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC-DGIIH 1131 (1472)
Q Consensus 1054 L~~H~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~-DG~I~ 1131 (1472)
..+|.+.|..++|+|||++| ++++.|++|++|++......... .........+.+++|+|+++.+++++. ++.|.
T Consensus 32 ~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~---~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~ 108 (333)
T d1ri6a_ 32 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF---AAESALPGSLTHISTDHQGQFVFVGSYNAGNVS 108 (333)
T ss_dssp EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE---EEEEECSSCCSEEEECTTSSEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCEEE---EEECCCCCCCEEEEECCCCCEEEECCCCCCCEE
T ss_conf 97579988689995897999999778996999999689870798---530136998549999599988742056888302
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEE-CCCEEEEEECCCCCCCCEEE----CC
Q ss_conf 99801124688864334685452330279985899997137998721999995-89749999599898654000----47
Q 000470 1132 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST-QNCGIHLWDTRSNSNTWTLK----AI 1206 (1472)
Q Consensus 1132 iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at-~dg~I~iwDlrt~~~~~~l~----~~ 1206 (1472)
+|+...... ........+...+..+.++++ ++.++.+. .+..|.+|+........... ..
T Consensus 109 ~~~~~~~~~------------~~~~~~~~~~~~~~~v~~s~d---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (333)
T d1ri6a_ 109 VTRLEDGLP------------VGVVDVVEGLDGCHSANISPD---NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 173 (333)
T ss_dssp EEEEETTEE------------EEEEEEECCCTTBCCCEECTT---SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EECCCCCCC------------EECCCCCCCCCCCEEEEEEEC---CEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEE
T ss_conf 200111000------------000100377853149886301---01310256554205689732687410010001334
Q ss_pred CCCCCEEEEEECCCCCEEEE-EECCCCEEEEECCCC
Q ss_conf 87665389999699989999-937993999978999
Q 000470 1207 PEEGYVSSLVTGPCGNWFVS-GSSRGVLTLWDLRFL 1241 (1472)
Q Consensus 1207 ~h~g~Itsi~~sp~g~~Lvs-GssdG~I~lWDlR~~ 1241 (1472)
.....+..++|++++.++.. +...+...+|+....
T Consensus 174 ~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 209 (333)
T d1ri6a_ 174 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP 209 (333)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT
T ss_pred ECCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCC
T ss_conf 038875279996020147862046672178851035
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.77 E-value=2.2e-14 Score=105.87 Aligned_cols=270 Identities=11% Similarity=0.059 Sum_probs=163.9
Q ss_pred CCC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCCCCCEEEECCCC----
Q ss_conf 855-56536345112345555899907997999992----------999799993998864421111058741697----
Q 000470 1043 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSAS----------DDSTVKVWDSRKLEKDISFRSRLTYHLEGS---- 1107 (1472)
Q Consensus 1043 ~W~-p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS----------~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~---- 1107 (1472)
.|+ ..|+++..+..+..+ .++|+|||+++++++ .++.|.+||..+++.. .....+..
T Consensus 51 v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~------~~~~~~~~~~~~ 122 (373)
T d2madh_ 51 VLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI------ADIELPDAPRFD 122 (373)
T ss_pred EEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEE------EEEECCCCCEEE
T ss_conf 9989999799999579886--07986899989999605775321245318999977789388------897268851368
Q ss_pred ---CEEEEEEECCCCEEEEEE--CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf ---327999924997999991--799499998011246888643346854523302799858999971379987219999
Q 000470 1108 ---RALCTMMLRHSAQVVVGA--CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMY 1182 (1472)
Q Consensus 1108 ---~I~~i~f~~~~~~las~s--~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~ 1182 (1472)
....+.|++++..+++.. .++.+.+|+..... .. .+.....+..+++++ ...+++
T Consensus 123 ~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-------------~~-----~~~~~~~~~~~s~~g--~~~~v~ 182 (373)
T d2madh_ 123 VGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS-------------DD-----QLLSSPTCYHIHPGA--PSTFYL 182 (373)
T ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCE-------------EE-----EEECCCEEEEEECCC--CCEEEE
T ss_conf 5168970899858993799998698746776236872-------------89-----982452069996289--919999
Q ss_pred EECCCEEEEEECCCCCCCCEEECC----CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CC-----
Q ss_conf 958974999959989865400047----87665389999699989999937993999978999510067415-66-----
Q 000470 1183 STQNCGIHLWDTRSNSNTWTLKAI----PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QV----- 1252 (1472)
Q Consensus 1183 at~dg~I~iwDlrt~~~~~~l~~~----~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~-~~----- 1252 (1472)
...++.+.+||.......+..... ........+.+++++ .++..+.++.+.+|+............. ..
T Consensus 183 ~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (373)
T d2madh_ 183 LCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred ECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCC-EEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEE
T ss_conf 9479939999747742667886300366753043458878994-299925896599997689907897763056475786
Q ss_pred -----CCCEEEEEECCCCCCC-CCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----7720478425999974-4468999799998699499998688717789861358898766877632358898899
Q 000470 1253 -----CPIEKMCLFVPPPNAA-VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1326 (1472)
Q Consensus 1253 -----~~I~~l~~~~p~~~~~-~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 1326 (1472)
.....+.+ +++.... .....+..++....++.+.+||..+++....+...
T Consensus 262 ~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~----------------------- 317 (373)
T d2madh_ 262 DTWRPGGWQQVAY-LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----------------------- 317 (373)
T ss_pred EEECCCCCEEEEE-ECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCC-----------------------
T ss_conf 6413674133577-1499759995488824786258986999989999698986689-----------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC---EEECCCCCEEEEEECCCCCCCEEEEC
Q ss_conf 97533234453322234489998867815834489991---89816999099973999999649718
Q 000470 1327 PKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD---LLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1327 ~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~---LiTgg~Dg~IriWDl~~~~~s~vi~g 1390 (1472)
..+.++.|+|+|. +++++.|+.|++||+.+++....+.+
T Consensus 318 -------------------------~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~ 359 (373)
T d2madh_ 318 -------------------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVE 359 (373)
T ss_pred -------------------------CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECC
T ss_conf -------------------------982589999899989999967999299999999989999888
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.74 E-value=3.9e-14 Score=104.33 Aligned_cols=300 Identities=9% Similarity=-0.038 Sum_probs=172.5
Q ss_pred CCCCCCEEEEEECCCCCEEEEE-----ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE----
Q ss_conf 1234555589990799799999-----2999799993998864421111058741697327999924997999991----
Q 000470 1055 QEHCSAVNEIAISHDHSFFVSA-----SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA---- 1125 (1472)
Q Consensus 1055 ~~H~~~V~~iafspd~~~lvSg-----S~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s---- 1125 (1472)
..+.+++..++++||++.++.. +.++.|.+||..+++ ...+...+. ...+.|+|++..+++++
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~------~~~~~~~~~--~~~~a~SpDG~~l~va~~~~~ 88 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGS------ILGHVNGGF--LPNPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC------EEEEEECCC--CCCEEECCCCCEEEEEEECCC
T ss_conf 567898656301899978999734225787659999899997------999995798--860798689998999960577
Q ss_pred ------CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCE------EEEEEECCCCCCCEEEEE--EECCCEEEE
Q ss_conf ------799499998011246888643346854523302799858------999971379987219999--958974999
Q 000470 1126 ------CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAI------VTLVNYNTDNCASHMFMY--STQNCGIHL 1191 (1472)
Q Consensus 1126 ------~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~d~~s~~~Lv~--at~dg~I~i 1191 (1472)
.++.|.+||..+.. .+.......... ...+.|+++ +..+++ ...++.+.+
T Consensus 89 ~~~~~~~~~~v~v~D~~t~~-------------~~~~~~~~~~~~~~~~~~~~~~~~s~d---g~~~~v~~~~~~~~~~~ 152 (373)
T d2madh_ 89 RIAKGKRTDYVEVFDPVTFL-------------PIADIELPDAPRFDVGPYSWMNANTPN---NADLLFFQFAAGPAVGL 152 (373)
T ss_pred CCCCCCCCEEEEEEECCCCC-------------EEEEEECCCCCEEEECCCCCCEEEEEC---CCCEEEEEECCCCCEEE
T ss_conf 53212453189999777893-------------888972688513685168970899858---99379999869874677
Q ss_pred EECCCCCCCCEEECCCCCCCEEEEEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEECCCC----CCC-EEEEEECCCC
Q ss_conf 95998986540004787665389999699989-99993799399997899951006741566----772-0478425999
Q 000470 1192 WDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQV----CPI-EKMCLFVPPP 1265 (1472)
Q Consensus 1192 wDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~-LvsGssdG~I~lWDlR~~~~i~s~~~~~~----~~I-~~l~~~~p~~ 1265 (1472)
|+....+... +...+.++.++|++.. +++++.||.+.+||............... .+. ..... .+.
T Consensus 153 ~~~~~~~~~~------~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 224 (373)
T d2madh_ 153 VVQGGSSDDQ------LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQA-NKS- 224 (373)
T ss_pred EECCCCEEEE------EECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEE-CCC-
T ss_conf 6236872899------82452069996289919999947993999974774266788630036675304345887-899-
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97444689997999986994999986887177898613588987668776323588988999753323445332223448
Q 000470 1266 NAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELN 1345 (1472)
Q Consensus 1266 ~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 1345 (1472)
...+..+.++.+.+|+.................... ...+. |... ....
T Consensus 225 ---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~------------~~~~----- 273 (373)
T d2madh_ 225 ---------GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK--ADTWR---PGGW------------QQVA----- 273 (373)
T ss_pred ---------CEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEE--EEEEC---CCCC------------EEEE-----
T ss_conf ---------429992589659999768990789776305647578--66413---6741------------3357-----
Q ss_pred CCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHH
Q ss_conf 99988678158344899918981699909997399999964971899889999840678605861999954058864012
Q 000470 1346 EPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1425 (1472)
Q Consensus 1346 ~~~~~~~~V~sl~~~p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~ 1425 (1472)
.............++..+++...++.|.+||..+++....+.
T Consensus 274 --~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~------------------------------------ 315 (373)
T d2madh_ 274 --YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS------------------------------------ 315 (373)
T ss_pred --EECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEC------------------------------------
T ss_conf --714997599954888247862589869999899996989866------------------------------------
Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC--EEEEECCCCEEEECC
Q ss_conf 46788754201777887530458752206982--899980894389839
Q 000470 1426 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQR--LLISSSRDGAIKVWK 1472 (1472)
Q Consensus 1426 ~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~--~LvS~s~DG~IkVWk 1472 (1472)
+...+.+++ |+++++ ++++++.||.|+||+
T Consensus 316 ----------------~~~~~~~~a-~spDG~~~l~vt~~~d~~v~v~D 347 (373)
T d2madh_ 316 ----------------LGHDVDAIS-VAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred ----------------CCCCEEEEE-ECCCCCEEEEEEECCCCEEEEEE
T ss_conf ----------------899825899-99899989999967999299999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.2e-18 Score=133.72 Aligned_cols=291 Identities=20% Similarity=0.259 Sum_probs=173.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78023999999999970369920012422311210234886036789999999762446101899876542121223579
Q 000470 430 KLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSM 509 (1472)
Q Consensus 430 ~~~~sk~~~l~ll~~~~~~~~de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l~~ 509 (1472)
..+.-|..|+..+..+++.+..+..-+.++|.+..+++|+...||..|+.++.++...... .-+.++|+|.+..
T Consensus 176 ~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~------~~~~~~i~~~l~~ 249 (588)
T d1b3ua_ 176 DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQ------EDLEALVMPTLRQ 249 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCH------HHHHHHTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHH
T ss_conf 9989999999999989987157877999999999974488524678999888776305888------9999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCHH-------H-HCCCHHHHHHH
Q ss_conf 999998314677883069999999999999997521-03444468999999999742001-------1-02570889999
Q 000470 510 LPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSE-AGVLDKLSAPHKSPSSSNETSVQ-------L-QRLNADVQLSQ 580 (1472)
Q Consensus 510 l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~l~~ 580 (1472)
+.+|++..||.+.|++|+.|+.....-......+.. ...+... +.+.... . .....+.....
T Consensus 250 ~~~D~~~~Vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ll~d~---------~~~vr~~a~~~l~~~~~~l~~~~~~~~ 320 (588)
T d1b3ua_ 250 AAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC---------EAEVRAAASHKVKEFCENLSADCRENV 320 (588)
T ss_dssp HHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCS---------SHHHHHHHHHHHHHHHHTSCTTTHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20235688889999857888877665343444168999987213---------357779999879999998766554332
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 99999999999822999996899999834300000138656553212222213569875689999710241445304311
Q 000470 581 LRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERS 660 (1472)
Q Consensus 581 l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s 660 (1472)
....+...+..++. |.+..||.++...+..++..+|++.+.+.++|.++.+|+|.|+.+|.+.+.++..++..+|...
T Consensus 321 ~~~~i~~~l~~~~~--d~~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~~~ 398 (588)
T d1b3ua_ 321 IMSQILPCIKELVS--DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQ 398 (588)
T ss_dssp HHHTHHHHHHHHHT--CSCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 19999888887613--8876789999998865543013167888888889999875102222677888888875003134
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 4574788897631798148899999999999981988257899-999853222346869999999999999970489443
Q 000470 661 VEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILL-EMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVD 739 (1472)
Q Consensus 661 ~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~~~~-~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~~ad 739 (1472)
+.+.++|.+.+.+.|....|...+++++..+++. +....+. .+......++..++..||++|+..+..+++.+++..
T Consensus 399 ~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~--~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~~ 476 (588)
T d1b3ua_ 399 LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQ--LGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEW 476 (588)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH--HCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 4367789999998433588999999999999977--18476778888887763568741689999999999999839387
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=3e-19 Score=137.55 Aligned_cols=299 Identities=16% Similarity=0.170 Sum_probs=204.3
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 26888843102678023999999999970369920012422311210234886036789999999762446101899876
Q 000470 418 IASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAK 497 (1472)
Q Consensus 418 ~ls~i~s~~R~~~~~~sk~~~l~ll~~~~~~~~de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~ 497 (1472)
++.++...++. ..+.-|..|++.+..++..++++.....++|.+..++.|.+..||..+.++|.++...+. ..
T Consensus 204 l~~~l~~l~~d-~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~------~~ 276 (588)
T d1b3ua_ 204 IIPMFSNLASD-EQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVG------PE 276 (588)
T ss_dssp HHHHHHHHHTC-SCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHC------HH
T ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH------HH
T ss_conf 99999997448-852467899988877630588899999999999972023568888999985788887766------53
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH------HHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 542121223579999998314677883069999999------99999-99975210344446899999999974200110
Q 000470 498 IFPEYILPMLSMLPDDPEESVRICYASNIAKLALTA------YGFLV-HSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQ 570 (1472)
Q Consensus 498 iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a------~rfl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1472)
+..+.++|.+..+..|++..||.+-+.+++.++..- .-+++ +...+... +.. .+........
T Consensus 277 ~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~--~~d---------~~~~vr~~~~ 345 (588)
T d1b3ua_ 277 ITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEL--VSD---------ANQHVKSALA 345 (588)
T ss_dssp HHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHH--HTC---------SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC---------CCHHHHHHHH
T ss_conf 43444168999987213357779999879999998766554332199998888876--138---------8767899999
Q ss_pred -CCCHH---HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -25708---89999999999999998229999968999998343000001386565532122222135698756899997
Q 000470 571 -RLNAD---VQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFY 646 (1472)
Q Consensus 571 -~~~~~---~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff 646 (1472)
.+..- -.-+...+.+...+..++. |.++.||.+.+..+..++.-+|.....+.+++.+...++|++|..|.+.+
T Consensus 346 ~~l~~~~~~~~~~~~~~~l~p~l~~~l~--d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~ 423 (588)
T d1b3ua_ 346 SVIMGLSPILGKDNTIEHLLPLFLAQLK--DECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAII 423 (588)
T ss_dssp TTGGGGHHHHCHHHHHHHTHHHHHHHHT--CSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9886554301316788888888999987--51022226778888888750031344367789999998433588999999
Q ss_pred HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 102414453043114574788897631798148899999999999981988257-8999998532223468699999999
Q 000470 647 GQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKR-ILLEMIERAFPLLCYPSQWVRRSVV 725 (1472)
Q Consensus 647 ~~i~~v~~~vG~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~-~~~~~~~~~~~ll~HPn~wIR~~~~ 725 (1472)
+.+..++...|...+.+++.|++...|.|+..-|-..|+++|..|++. +.+. ..-.++.....++-+||.++|++++
T Consensus 424 ~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~--~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~ 501 (588)
T d1b3ua_ 424 EYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEK--FGKEWAHATIIPKVLAMSGDPNYLHRMTTL 501 (588)
T ss_dssp HHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH--HCHHHHHHHTHHHHHHTTTCSCHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999999977184767788888877635687416899999999999998--393878999999999986599878999999
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999997048944
Q 000470 726 TFIAASSESLGAV 738 (1472)
Q Consensus 726 ~~i~~~~~~l~~a 738 (1472)
..+..+...++.-
T Consensus 502 ~~l~~l~~~~~~~ 514 (588)
T d1b3ua_ 502 FCINVLSEVCGQD 514 (588)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHH
T ss_conf 9999999986968
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=9.4e-14 Score=101.83 Aligned_cols=284 Identities=9% Similarity=0.072 Sum_probs=170.0
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 7999992999799993998864421111058741697327999924997999991-799499998011246888643346
Q 000470 1071 SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYS 1149 (1472)
Q Consensus 1071 ~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s-~DG~I~iwdi~~~~~~~~~~~~~~ 1149 (1472)
..+++++.|++|++|++...... .......+++.+.+++|+|+++.|++++ .|+.|++|+++....
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l----~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~--------- 71 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGAL----TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG--------- 71 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE----EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC---------
T ss_pred EEEEECCCCCCEEEEEECCCCCE----EEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCC---------
T ss_conf 99998789993899998399976----99999757998868999589799999977899699999968987---------
Q ss_pred CCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEC-CCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 854523302799858999971379987219999958-9749999599898654000478766538999969998999993
Q 000470 1150 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ-NCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGS 1228 (1472)
Q Consensus 1150 ~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~-dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs 1228 (1472)
.. ... .....+.....++|+|+ ++.++++.. ++.|.+|+..............+...+.++.++|+++.++++.
T Consensus 72 ~~-~~~-~~~~~~~~p~~l~~spD---g~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~ 146 (333)
T d1ri6a_ 72 AL-TFA-AESALPGSLTHISTDHQ---GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA 146 (333)
T ss_dssp CE-EEE-EEEECSSCCSEEEECTT---SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE
T ss_pred CE-EEE-EECCCCCCCEEEEECCC---CCEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCEEEECCC
T ss_conf 07-985-30136998549999599---98874205688830220011100000010037785314988630101310256
Q ss_pred C-CCCEEEEECCCCCCCCEEE-----CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE-CCCEEEEEECCCCEE----E
Q ss_conf 7-9939999789995100674-----156677204784259999744468999799998-699499998688717----7
Q 000470 1229 S-RGVLTLWDLRFLVPVNSWQ-----YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSC----H 1297 (1472)
Q Consensus 1229 s-dG~I~lWDlR~~~~i~s~~-----~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas-~dg~V~VWDl~tg~~----~ 1297 (1472)
. +..+.+|+........... .........+.+ ++... .++... ..+...+|+...... .
T Consensus 147 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~-~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~ 216 (333)
T d1ri6a_ 147 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF-HPNEQ---------YAYCVNELNSSVDVWELKDPHGNIECV 216 (333)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE-CTTSS---------EEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred CCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEE-ECCCE---------EEEEECCCCCCEEEEEECCCCCCEEEE
T ss_conf 55420568973268741001000133403887527999-60201---------478620466721788510355520210
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC--CEEECCCCCEEE
Q ss_conf 898613588987668776323588988999753323445332223448999886781583448999--189816999099
Q 000470 1298 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGGTDLKIR 1375 (1472)
Q Consensus 1298 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g--~LiTgg~Dg~Ir 1375 (1472)
........ ..........+.+++++ .++++..++.++
T Consensus 217 ~~~~~~~~-----------------------------------------~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~ 255 (333)
T d1ri6a_ 217 QTLDMMPE-----------------------------------------NFSDTRWAADIHITPDGRHLYACDRTASLIT 255 (333)
T ss_dssp EEEECSCT-----------------------------------------TCCSCCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEEEEC-----------------------------------------CCCCCCCCEEEEEECCCCCEEEECCCCCEEE
T ss_conf 02234306-----------------------------------------8776553126899515672055045688278
Q ss_pred EEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
Q ss_conf 97399999964971899889999840678605861999954058864012467887542017778875304587522069
Q 000470 1376 RWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLN 1455 (1472)
Q Consensus 1376 iWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~ 1455 (1472)
+|++........+.+.. .+.+.+.+++ |+++
T Consensus 256 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~p~~~a-~spD 286 (333)
T d1ri6a_ 256 VFSVSEDGSVLSKEGFQ------------------------------------------------PTETQPRGFN-VDHS 286 (333)
T ss_dssp EEEECTTSCCEEEEEEE------------------------------------------------ECSSSCCCEE-ECTT
T ss_pred EEEECCCCCEEEEEEEE------------------------------------------------CCCCCEEEEE-EECC
T ss_conf 78873999789999996------------------------------------------------7899762899-9079
Q ss_pred CCEEEEE-CCCCEEEECC
Q ss_conf 8289998-0894389839
Q 000470 1456 QRLLISS-SRDGAIKVWK 1472 (1472)
Q Consensus 1456 ~~~LvS~-s~DG~IkVWk 1472 (1472)
+++|+.+ ++++.|.||+
T Consensus 287 Gk~l~va~~~~~~v~v~~ 304 (333)
T d1ri6a_ 287 GKYLIAAGQKSHHISVYE 304 (333)
T ss_dssp SSEEEEECTTTCEEEEEE
T ss_pred CCEEEEEECCCCEEEEEE
T ss_conf 899999988999399999
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.68 E-value=6.5e-14 Score=102.88 Aligned_cols=276 Identities=11% Similarity=0.033 Sum_probs=157.0
Q ss_pred CCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEE----------ECCCCEEEEECCCCCCCCCCCC-CEEEECCCCCEE
Q ss_conf 8555-653634511234555589990799799999----------2999799993998864421111-058741697327
Q 000470 1043 GWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSA----------SDDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRAL 1110 (1472)
Q Consensus 1043 ~W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSg----------S~DGtVkIWD~~~~e~~~~~~s-~~t~~~~~~~I~ 1110 (1472)
.|+. +|++++++..+..+ .++||||+++++.+ +.||.|++||..+++....... .......+....
T Consensus 32 v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~ 109 (355)
T d2bbkh_ 32 VIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW 109 (355)
T ss_dssp EEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG
T ss_pred EEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCC
T ss_conf 9999999499999899998--56994899999999677764201589998999999999798898058864031179873
Q ss_pred EEEEECCCCEEEEEE--CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCE
Q ss_conf 999924997999991--799499998011246888643346854523302799858999971379987219999958974
Q 000470 1111 CTMMLRHSAQVVVGA--CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCG 1188 (1472)
Q Consensus 1111 ~i~f~~~~~~las~s--~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~ 1188 (1472)
.+.|+++++.++++. .+..+.+|+..+.. ........... ...... ....+..+.||.
T Consensus 110 ~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~--~~~~~~-----~~~~~~~~~dg~ 169 (355)
T d2bbkh_ 110 MTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA-------------FKRMLDVPDCY--HIFPTA-----PDTFFMHCRDGS 169 (355)
T ss_dssp GEEECTTSSEEEEEECSSSCEEEEEETTTTE-------------EEEEEECCSEE--EEEEEE-----TTEEEEEETTSC
T ss_pred EEEEECCCCEEEEECCCCCCEEEEEECCCCC-------------EEEEEECCCCC--EEEECC-----CCCEEEECCCCC
T ss_conf 4999338871577327988204543057883-------------76677058740--473069-----963699938999
Q ss_pred EEEEECCCCCCCCEEE----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC--CEEECCCCCCCEEEEEEC
Q ss_conf 9999599898654000----4787665389999699989999937993999978999510--067415667720478425
Q 000470 1189 IHLWDTRSNSNTWTLK----AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPV--NSWQYSQVCPIEKMCLFV 1262 (1472)
Q Consensus 1189 I~iwDlrt~~~~~~l~----~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i--~s~~~~~~~~I~~l~~~~ 1262 (1472)
...++........... ...+...+.+..+.+.+..++.++.+|.+.+||+..+... ..... +........+ .
T Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 247 (355)
T d2bbkh_ 170 LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA-LTEAERADGW-R 247 (355)
T ss_dssp EEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEES-SCHHHHHTTE-E
T ss_pred EEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCC-CCCCEEEEEE-E
T ss_conf 8999834787379996243330001106102153899738874699829999658990799844578-4412685433-0
Q ss_pred CCC-CCCCCCCCCCEEEEEECC----------CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999-974446899979999869----------949999868871778986135889876687763235889889997533
Q 000470 1263 PPP-NAAVSTTARPLIYVAAGC----------NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1331 (1472)
Q Consensus 1263 p~~-~~~~~s~~~~~i~vas~d----------g~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 1331 (1472)
|.. ..+..+.++..++++..+ +.|.+||..+++....+....
T Consensus 248 p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~--------------------------- 300 (355)
T d2bbkh_ 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--------------------------- 300 (355)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---------------------------
T ss_pred CCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCC---------------------------
T ss_conf 35108999807997678874068712651799759998678884989966899---------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC---EEECCCCCEEEEEECCCCCCCEEEEC
Q ss_conf 234453322234489998867815834489991---89816999099973999999649718
Q 000470 1332 RRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD---LLTGGTDLKIRRWDHCSPGRSYCICG 1390 (1472)
Q Consensus 1332 ~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~---LiTgg~Dg~IriWDl~~~~~s~vi~g 1390 (1472)
.+++++|+|+|. +++++.|+.|++||.++++....+.+
T Consensus 301 ---------------------~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~ 341 (355)
T d2bbkh_ 301 ---------------------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341 (355)
T ss_dssp ---------------------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred ---------------------CEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf ---------------------87799992899969999978999899999999989999928
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.60 E-value=8e-13 Score=95.77 Aligned_cols=203 Identities=7% Similarity=-0.027 Sum_probs=92.1
Q ss_pred EEEEEECCCCCEEEEE-----ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE----------
Q ss_conf 5589990799799999-----2999799993998864421111058741697327999924997999991----------
Q 000470 1061 VNEIAISHDHSFFVSA-----SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA---------- 1125 (1472)
Q Consensus 1061 V~~iafspd~~~lvSg-----S~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s---------- 1125 (1472)
+.-.+.+||++.++.. +.+++|.+||..+++ ...+...+ ....++|+|+++.+++++
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~------~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~ 75 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR------VIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGE 75 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE------EEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCC------EEEEEECC--CCCCEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 174765899999999826647776719999999994------99999899--9985699489999999967776420158
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEE--ECCCEEEEEECCCCCCCCEE
Q ss_conf 7994999980112468886433468545233027998589999713799872199999--58974999959989865400
Q 000470 1126 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS--TQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1126 ~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~a--t~dg~I~iwDlrt~~~~~~l 1203 (1472)
.||.|++||..+... .... .... . . ....+.....+.|+++ +..++.+ +.+..+.+||..+++....+
T Consensus 76 ~d~~v~v~D~~t~~~-~~~~-~~~~--~-~--~~~~~~~~~~~~~s~d---g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 145 (355)
T d2bbkh_ 76 RTDYVEVFDPVTLLP-TADI-ELPD--A-P--RFLVGTYPWMTSLTPD---GKTLLFYQFSPAPAVGVVDLEGKAFKRML 145 (355)
T ss_dssp EEEEEEEECTTTCCE-EEEE-EETT--C-C--CCCBSCCGGGEEECTT---SSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCCE-EEEE-ECCC--C-C--EEECCCCCCEEEEECC---CCEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 999899999999979-8898-0588--6-4--0311798734999338---87157732798820454305788376677
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC-----CCCCCCEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 0478766538999969998999993799399997899951006741-----56677204784259999744468999799
Q 000470 1204 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-----SQVCPIEKMCLFVPPPNAAVSTTARPLIY 1278 (1472)
Q Consensus 1204 ~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~-----~~~~~I~~l~~~~p~~~~~~~s~~~~~i~ 1278 (1472)
..+. ....... .....+..+.||....|+.........+.. .+...+....+ . .+...++
T Consensus 146 ~~~~---~~~~~~~--~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~ 210 (355)
T d2bbkh_ 146 DVPD---CYHIFPT--APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY-S---------QKAGRLV 210 (355)
T ss_dssp ECCS---EEEEEEE--ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE-E---------TTTTEEE
T ss_pred ECCC---CCEEEEC--CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCC-C---------CCCCEEE
T ss_conf 0587---4047306--9963699938999899983478737999624333000110610215-3---------8997388
Q ss_pred EEECCCEEEEEECCCCEE
Q ss_conf 998699499998688717
Q 000470 1279 VAAGCNEVSLWNAENGSC 1296 (1472)
Q Consensus 1279 vas~dg~V~VWDl~tg~~ 1296 (1472)
.++.++.+.+|++..+..
T Consensus 211 ~~~~~~~~~v~~~~~~~~ 228 (355)
T d2bbkh_ 211 WPTYTGKIHQIDLSSGDA 228 (355)
T ss_dssp EEBTTSEEEEEECTTSSC
T ss_pred EECCCCEEEEEECCCCCE
T ss_conf 746998299996589907
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.45 E-value=8e-12 Score=89.27 Aligned_cols=273 Identities=10% Similarity=-0.027 Sum_probs=152.5
Q ss_pred CCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCCCC-CEEEECCCCCEEE
Q ss_conf 555-6536345112345555899907997999992----------999799993998864421111-0587416973279
Q 000470 1044 WRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSAS----------DDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRALC 1111 (1472)
Q Consensus 1044 W~p-~G~lV~~L~~H~~~V~~iafspd~~~lvSgS----------~DGtVkIWD~~~~e~~~~~~s-~~t~~~~~~~I~~ 1111 (1472)
|++ .|.++..+..+..+ .++|+||++.++.++ .|++|.+||..+++....... .......+.....
T Consensus 51 ~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~ 128 (368)
T d1mdah_ 51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI 128 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS
T ss_pred EECCCCCEEEEEECCCCC--CCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCC
T ss_conf 708998377888578777--513989998899975567640103567869999899993830643785421024688640
Q ss_pred EEEECCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEE
Q ss_conf 99924997999991-79949999801124688864334685452330279985899997137998721999995897499
Q 000470 1112 TMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIH 1190 (1472)
Q Consensus 1112 i~f~~~~~~las~s-~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~ 1190 (1472)
++|++++++++++. .++.+.+||+.+.. ..+......... ..+.. ...++..+.||.+.
T Consensus 129 ~a~SpDGk~l~va~~~~~~v~~~d~~~~~-------------~~~~~~~~~~~~-----~~~~~--~~~~v~~~~Dg~~~ 188 (368)
T d1mdah_ 129 IGNCASSACLLFFLFGSSAAAGLSVPGAS-------------DDQLTKSASCFH-----IHPGA--AATHYLGSCPASLA 188 (368)
T ss_dssp EEECTTSSCEEEEECSSSCEEEEEETTTE-------------EEEEEECSSCCC-----CEEEE--TTEEECCCCTTSCE
T ss_pred EEECCCCCEEEEEECCCCEEEEEECCCCC-------------EEEEEECCCCCE-----ECCCC--CCEEEEECCCCCEE
T ss_conf 58878998999996899859999899893-------------867860467523-----74699--82399994899889
Q ss_pred EEECCCCCCCCEEEC----CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCC-EEEEEECCCC
Q ss_conf 995998986540004----78766538999969998999993799399997899951006741566772-0478425999
Q 000470 1191 LWDTRSNSNTWTLKA----IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPI-EKMCLFVPPP 1265 (1472)
Q Consensus 1191 iwDlrt~~~~~~l~~----~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I-~~l~~~~p~~ 1265 (1472)
.|++........... ..+...+....+++++..+.+ ..|.+.++|.................. ....+ .|..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 265 (368)
T d1mdah_ 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNF-RSAG 265 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTE-EECS
T ss_pred EEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEE--CCCCEEEEEECCCCEEEEEECCCCCCEEEEEEE-CCCC
T ss_conf 9982689626665303111356664660101558689993--489779996069936997602465430455401-2788
Q ss_pred -CCCCCCCCCCEEEEEECC---------CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -974446899979999869---------9499998688717789861358898766877632358898899975332344
Q 000470 1266 -NAAVSTTARPLIYVAAGC---------NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV 1335 (1472)
Q Consensus 1266 -~~~~~s~~~~~i~vas~d---------g~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1335 (1472)
.....+.++..+++...+ ..+.+||..++++...+...
T Consensus 266 ~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~-------------------------------- 313 (368)
T d1mdah_ 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-------------------------------- 313 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--------------------------------
T ss_pred CEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCC--------------------------------
T ss_conf 356887179987999835897334058864999989999486895589--------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCC---EEECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 53322234489998867815834489991---8981699909997399999964971
Q 000470 1336 NQKYRVDELNEPPPRLLGIRSLLPLPGGD---LLTGGTDLKIRRWDHCSPGRSYCIC 1389 (1472)
Q Consensus 1336 ~~~~~~~~l~~~~~~~~~V~sl~~~p~g~---LiTgg~Dg~IriWDl~~~~~s~vi~ 1389 (1472)
..+.++.|+|+|. +++++.|+.|++||..+++....+.
T Consensus 314 ----------------~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~ 354 (368)
T d1mdah_ 314 ----------------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp ----------------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred ----------------CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf ----------------96517999989998999994899969999899997999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.38 E-value=2.6e-13 Score=98.91 Aligned_cols=83 Identities=19% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 99988320128999489589993066795988970999999999999999999999999988984248889979991599
Q 000470 1 MSSTPCVHKKFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 80 (1472)
Q Consensus 1 l~hpNIv~~~~~~~~~~~~ylV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIvH~DIKpeNILv~~~~ 80 (1472)
+.|++++..+++. . .+++|||+++..... ++......++.|++.||.+||++||+||||||+|||++. +
T Consensus 71 l~~~~v~~~~~~~--~--~~lvme~~~~~~~~~------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~ 139 (191)
T d1zara2 71 LQGLAVPKVYAWE--G--NAVLMELIDAKELYR------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-E 139 (191)
T ss_dssp TTTSSSCCEEEEE--T--TEEEEECCCCEEGGG------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-T
T ss_pred CCCCCCCEEEEEC--C--CEEEEEEECCCCCCC------HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEEC-C
T ss_conf 1699914499862--8--889999504565420------015789999999999999982688898368903611428-9
Q ss_pred CEEEEECCCCCCCC
Q ss_conf 09997136643236
Q 000470 81 WLYLSDFASFKPTY 94 (1472)
Q Consensus 81 ~vkL~DFg~~k~~~ 94 (1472)
.++|+|||.++...
T Consensus 140 ~~~liDFG~a~~~~ 153 (191)
T d1zara2 140 GIWIIDFPQSVEVG 153 (191)
T ss_dssp EEEECCCTTCEETT
T ss_pred CEEEEECCCCCCCC
T ss_conf 89998778843089
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.34 E-value=1.8e-09 Score=73.89 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=17.0
Q ss_pred CCCCCCCEEEEEEEECCCCEEE-EECC
Q ss_conf 7887530458752206982899-9808
Q 000470 1439 AGCHRDSILSLGSVKLNQRLLI-SSSR 1464 (1472)
Q Consensus 1439 ~~~H~d~I~~ia~~~~~~~~Lv-S~s~ 1464 (1472)
+..|...+.+++ |++++++++ +++.
T Consensus 411 ~~~~~~~~~s~~-fSpdgky~~~~~s~ 436 (470)
T d2bgra1 411 LNPERCQYYSVS-FSKEAKYYQLRCSG 436 (470)
T ss_dssp TSTTTBCBEEEE-ECTTSSEEEEEECS
T ss_pred CCCCCCCEEEEE-ECCCCCEEEEEECC
T ss_conf 358889879999-99899999998328
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.32 E-value=1e-10 Score=82.04 Aligned_cols=211 Identities=9% Similarity=-0.060 Sum_probs=101.0
Q ss_pred CCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEE-CCCCCEEEEEEECCCCE--EEEEECCCCE
Q ss_conf 1234555589990799799-999299979999399886442111105874-16973279999249979--9999179949
Q 000470 1055 QEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYH-LEGSRALCTMMLRHSAQ--VVVGACDGII 1130 (1472)
Q Consensus 1055 ~~H~~~V~~iafspd~~~l-vSgS~DGtVkIWD~~~~e~~~~~~s~~t~~-~~~~~I~~i~f~~~~~~--las~s~DG~I 1130 (1472)
..|........++|||+++ ++...+..|.+||+.+++. ..... ..+..+..+.|.++++. ++..+. ..+
T Consensus 68 d~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~------~~ii~iP~g~gphgi~~spdg~t~YV~~~~~-~~v 140 (441)
T d1qnia2 68 DCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKT------DKITHIPNVQAIHGLRLQKVPKTNYVFCNAE-FVI 140 (441)
T ss_dssp CBCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE------EEEEECTTCCCEEEEEECCSSBCCEEEEEEC-SCE
T ss_pred CCCCCCCCEECCCCCCCEEEEECCCCCEEEEEECCCCCE------EEEEECCCCCCCCCEEEECCCCEEEEEECCC-CCC
T ss_conf 556777221032688888999738999799998877847------5579567887864348705699899995667-754
Q ss_pred EE------EECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECC-CEEEEEECCCCCCCCEE
Q ss_conf 99------980112468886433468545233027998589999713799872199999589-74999959989865400
Q 000470 1131 HM------FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN-CGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1131 ~i------wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~d-g~I~iwDlrt~~~~~~l 1203 (1472)
.+ |+.+. ....-............+... +.....+.++++ |+.+++++.+ ..+..+|..+......+
T Consensus 141 ~~~~dg~~~~~~~-~~~~~~~iD~~t~~v~~qI~v--~~~p~~v~~spd---Gk~a~vt~~nse~~~~id~~t~~~~d~i 214 (441)
T d1qnia2 141 PQPNDGTDFSLDN-SYTMFTAIDAETMDVAWQVIV--DGNLDNTDADYT---GKYATSTCYNSERAVDLAGTMRNDRDWV 214 (441)
T ss_dssp ESSCSSSCCCGGG-EEEEEEEEETTTCSEEEEEEE--SSCCCCEEECSS---SSEEEEEESCTTCCSSHHHHTCSSBCEE
T ss_pred CCCCCCCCCCCCC-CCCEEEEECCCCCEEEEEEEC--CCCCCCEEECCC---CCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 4367663001455-532388663755606478736--998654698799---9989998517873189851571217899
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE-C
Q ss_conf 047876653899996999899999379939999789995100674156677204784259999744468999799998-6
Q 000470 1204 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G 1282 (1472)
Q Consensus 1204 ~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas-~ 1282 (1472)
.. ......+.+.++|.++..+ .++.+.+|+......+..+..+ ...+.+.+ +|++. ++++++ .
T Consensus 215 ~v---~n~p~~~~~~~dGk~~~v~-~~~v~vvd~~~~~~v~~~IPvg--ksPhGv~v-SPDGk---------yl~~~~~~ 278 (441)
T d1qnia2 215 VV---FNVERIAAAVKAGNFKTIG-DSKVPVVDGRGESEFTRYIPVP--KNPHGLNT-SPDGK---------YFIANGKL 278 (441)
T ss_dssp EE---EEHHHHHHHHHTTCCBCCT-TCCCCEEECSSSCSSEEEECCB--SSCCCEEE-CTTSC---------EEEEECTT
T ss_pred EE---CCCCCEEEEECCCCEEEEC-CCCCEEEECCCCCCEEEEEECC--CCCCCCEE-CCCCC---------EEEEECCC
T ss_conf 96---8851107996699999969-9982899803687068997179--88667268-99987---------89990775
Q ss_pred CCEEEEEECCCC
Q ss_conf 994999986887
Q 000470 1283 CNEVSLWNAENG 1294 (1472)
Q Consensus 1283 dg~V~VWDl~tg 1294 (1472)
++.|+|||+++.
T Consensus 279 ~~tvsv~d~~k~ 290 (441)
T d1qnia2 279 SPTVSVIAIDKL 290 (441)
T ss_dssp SSBEEEEEGGGH
T ss_pred CCCEEEEEEEHH
T ss_conf 993899983224
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.14 E-value=1.9e-09 Score=73.85 Aligned_cols=228 Identities=8% Similarity=-0.025 Sum_probs=115.7
Q ss_pred CCCCC-CCCEEEECCCCCC-------CEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEE
Q ss_conf 88555-6536345112345-------555899907997999992-99979999399886442111105874169732799
Q 000470 1042 SGWRP-RGILVAHLQEHCS-------AVNEIAISHDHSFFVSAS-DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1112 (1472)
Q Consensus 1042 ~~W~p-~G~lV~~L~~H~~-------~V~~iafspd~~~lvSgS-~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i 1112 (1472)
..|++ .++.++.+..|.. ....++|+|||++++.+. .++++.+||+.+.+. ......++....
T Consensus 99 ~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~-- 170 (368)
T d1mdah_ 99 EVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSASCFHI-- 170 (368)
T ss_dssp EEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSSCCCC--
T ss_pred EEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCE------EEEEECCCCCEE--
T ss_conf 999899993830643785421024688640588789989999968998599998998938------678604675237--
Q ss_pred EEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEE
Q ss_conf 99249979999917994999980112468886433468545233027998589999713799872199999589749999
Q 000470 1113 MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLW 1192 (1472)
Q Consensus 1113 ~f~~~~~~las~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iw 1192 (1472)
+......+++.+.||.+.+|+........... . ......+........+.++ +..+ .+..+.++++
T Consensus 171 -~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~---g~~~--~~~~~~v~~~ 236 (368)
T d1mdah_ 171 -HPGAAATHYLGSCPASLAASDLAAAPAAAGIV--G------AQCTGAQNCSSQAAQANYP---GMLV--WAVASSILQG 236 (368)
T ss_dssp -EEEETTEEECCCCTTSCEEEECCSSCCCCEEC--C------CCSCTTSCBCSCCEEETTT---TEEE--ECBSSCCEEE
T ss_pred -CCCCCCEEEEECCCCCEEEEEECCCCEEEEEE--E------CCCCCCCCCCEEECCCCCC---CEEE--EECCCCEEEE
T ss_conf -46998239999489988999826896266653--0------3111356664660101558---6899--9348977999
Q ss_pred ECCCCCCCC----------EEECCCCCCCEEEEEECCCCCEEEEEECCC---------CEEEEECCCCCCCCEEECCCCC
Q ss_conf 599898654----------000478766538999969998999993799---------3999978999510067415667
Q 000470 1193 DTRSNSNTW----------TLKAIPEEGYVSSLVTGPCGNWFVSGSSRG---------VLTLWDLRFLVPVNSWQYSQVC 1253 (1472)
Q Consensus 1193 Dlrt~~~~~----------~l~~~~h~g~Itsi~~sp~g~~LvsGssdG---------~I~lWDlR~~~~i~s~~~~~~~ 1253 (1472)
|........ ........+....+++++++..+++...++ .+.+||...+..+..+... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~--~ 314 (368)
T d1mdah_ 237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--H 314 (368)
T ss_dssp ECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--E
T ss_pred EECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCC--C
T ss_conf 60699369976024654304554012788356887179987999835897334058864999989999486895589--9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCEEE-EEECCCEEEEEECCCCEEEEEEEC
Q ss_conf 7204784259999744468999799-998699499998688717789861
Q 000470 1254 PIEKMCLFVPPPNAAVSTTARPLIY-VAAGCNEVSLWNAENGSCHQVLRT 1302 (1472)
Q Consensus 1254 ~I~~l~~~~p~~~~~~~s~~~~~i~-vas~dg~V~VWDl~tg~~~~~l~~ 1302 (1472)
.+..+.+ +|++. .+++ ++.+++.|.+||..+++....+..
T Consensus 315 ~~~~~a~-spDG~--------~~ly~s~~~~~~v~v~D~~tgk~~~~i~~ 355 (368)
T d1mdah_ 315 DSDAIIA-AQDGA--------SDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EECEEEE-CCSSS--------CEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred CEEEEEE-CCCCC--------EEEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf 6517999-98999--------89999948999699998999979999879
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.12 E-value=2.6e-08 Score=66.45 Aligned_cols=93 Identities=5% Similarity=-0.099 Sum_probs=51.2
Q ss_pred CCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC---CCCEEEEC---------CCCCEE
Q ss_conf 855565363451123455558999079979999929997999939988644211---11058741---------697327
Q 000470 1043 GWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISF---RSRLTYHL---------EGSRAL 1110 (1472)
Q Consensus 1043 ~W~p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~---~s~~t~~~---------~~~~I~ 1110 (1472)
.|+..+.-+..+..|.+.+....|||||+.+|..+ |+.+.+|+...++..... .....+.+ ..+...
T Consensus 96 l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~ 174 (470)
T d2bgra1 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (470)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 99898885131246874231010146764135751-46413798899946532101477740535432011210047765
Q ss_pred EEEEECCCCEEEEEECCCC-EEEEECC
Q ss_conf 9999249979999917994-9999801
Q 000470 1111 CTMMLRHSAQVVVGACDGI-IHMFSVD 1136 (1472)
Q Consensus 1111 ~i~f~~~~~~las~s~DG~-I~iwdi~ 1136 (1472)
.+.|+|+++.++....|.+ +..|.+.
T Consensus 175 ~~~wSPDGk~ia~~~~d~~~v~~~~~~ 201 (470)
T d2bgra1 175 ALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (470)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred CCEECCCCCCCCEEEECCCCCCEEEEE
T ss_conf 307999987220268637767069987
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=6.7e-09 Score=70.25 Aligned_cols=283 Identities=16% Similarity=0.164 Sum_probs=165.1
Q ss_pred CHHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEECCCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 023999999999970369920---0124223112102348--86036789999999762446101899876542121223
Q 000470 432 PHYRRAAILLLKSSSLFIDDE---DRLQRVLPHVIAMLSD--PAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPM 506 (1472)
Q Consensus 432 ~~sk~~~l~ll~~~~~~~~de---~~LdrilPyl~~ll~d--~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~ 506 (1472)
...+..++..+-.+.+....+ ..++.++++++..+.+ .+..||..|++++..++....... +...+...+++.
T Consensus 143 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~--~~~~~~~~~~~~ 220 (458)
T d1ibrb_ 143 EHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANF--DKESERHFIMQV 220 (458)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHH--TSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_conf 778888998888987631410002338899999999861545679999999999999988613245--667777776766
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
Q ss_conf 5799999983146778830699999999999999975210--34444689999999997420011025708899999999
Q 000470 507 LSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEA--GVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKS 584 (1472)
Q Consensus 507 l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 584 (1472)
+..+..++++-||....+||..+++....++.- .+... ..+.... .+. .+......-.-+..+-+.
T Consensus 221 l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~--~l~~~~~~~~~~~~--------~~~--~~~~~~~a~~~l~~i~~~ 288 (458)
T d1ibrb_ 221 VCEATQCPDTRVRVAALQNLVKIMSLYYQYMET--YMGPALFAITIEAM--------KSD--IDEVALQGIEFWSNVCDE 288 (458)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTT--TTTTTHHHHHHHHH--------HCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH--------CCC--CHHHHHHHHHHHHHHHHH
T ss_conf 887725998999999999999999871999998--88778999999984--------354--599999999999998998
Q ss_pred HHHHHHHHHC---C---C-CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEC
Q ss_conf 9999999822---9---9-9996899999834300000138656553212222213569875689999710241445304
Q 000470 585 IAEVVQELVM---G---P-KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG 657 (1472)
Q Consensus 585 i~~~v~~ll~---~---~-~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG 657 (1472)
.......... . . -......+..+..+.+.. .-.+++.-....|.+|.+|.+..+.+..++...|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~ 359 (458)
T d1ibrb_ 289 EMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPIL---------TQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE 359 (458)
T ss_dssp HHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHH---------HHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8999985036787641899999999998899872667---------7640001021011223399999999999987551
Q ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 3114574788897631798148899999999999981--98825789999985322234686999999999999997048
Q 000470 658 ERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKS--GYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESL 735 (1472)
Q Consensus 658 ~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~--gLl~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l 735 (1472)
...+ +.++|.+.|.|.|++-.|...++.+|..+++. +-.-++.+-+++..+.+++-|||..||++|+..+..++..+
T Consensus 360 ~~~~-~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~ 438 (458)
T d1ibrb_ 360 DDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 438 (458)
T ss_dssp TTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHG
T ss_pred HHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7556-678999999856999899999999999999754776789889999999998848998999999999999999972
Q ss_pred CCC
Q ss_conf 944
Q 000470 736 GAV 738 (1472)
Q Consensus 736 ~~a 738 (1472)
+..
T Consensus 439 ~~~ 441 (458)
T d1ibrb_ 439 PEA 441 (458)
T ss_dssp GGG
T ss_pred HCC
T ss_conf 010
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=3.6e-11 Score=85.03 Aligned_cols=250 Identities=13% Similarity=0.090 Sum_probs=157.2
Q ss_pred HHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCC----CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 3268888431026-7802399999999997036992----0012422311210234886036789999999762446101
Q 000470 417 LIASLLCSCVRNV-KLPHYRRAAILLLKSSSLFIDD----EDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 491 (1472)
Q Consensus 417 i~ls~i~s~~R~~-~~~~sk~~~l~ll~~~~~~~~d----e~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~ 491 (1472)
-++..+...+.+. ....-|..|+..+..+..+..+ +.....+.|.+..++.++++.||..++.++.+++....
T Consensus 171 ~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~-- 248 (458)
T d1ibrb_ 171 EILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY-- 248 (458)
T ss_dssp HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCG--
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--
T ss_conf 999999998615456799999999999999886132456677777767668877259989999999999999998719--
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 8998765421212235799----999983146778830699999999999999975210344446899999999974200
Q 000470 492 PPSDAKIFPEYILPMLSML----PDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSV 567 (1472)
Q Consensus 492 ~~~~~~iF~eYilP~l~~l----~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1472)
..|.+|+.+.+..+ ..+...-||....+.+..+++............ ..... ..
T Consensus 249 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~-----~~~~~------------~~ 306 (458)
T d1ibrb_ 249 -----QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEA-----AEQGR------------PP 306 (458)
T ss_dssp -----GGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-----TCSSS------------CS
T ss_pred -----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH------------HH
T ss_conf -----999988877899999998435459999999999999899889999850367-----87641------------89
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 11025708899999999999999982299-----9996899999834300000138656553212222213569875689
Q 000470 568 QLQRLNADVQLSQLRKSIAEVVQELVMGP-----KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLR 642 (1472)
Q Consensus 568 ~~~~~~~~~~l~~l~~~i~~~v~~ll~~~-----~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR 642 (1472)
...... ......+.+.......+.+. |.+..++.+....+..+|..+|.+ .-+.+++.+...|++.||.-|
T Consensus 307 ~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~-~~~~l~~~i~~~l~s~~~~~r 382 (458)
T d1ibrb_ 307 EHTSKF---YAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD-IVPHVLPFIKEHIKNPDWRYR 382 (458)
T ss_dssp SCCCCC---HHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTT-HHHHHHHHHHHHTTCSSHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999---9998899872667764000102101122339999999999998755175-566789999998569998999
Q ss_pred HHHHHCCCEEEEEECCCHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 999710241445304311457---4788897631798148899999999999981
Q 000470 643 AVFYGQIVYVCFFVGERSVEE---YLLPYIEQALSDATEAVIVNALDCLAILCKS 694 (1472)
Q Consensus 643 ~aff~~i~~v~~~vG~~s~e~---~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~ 694 (1472)
-|-+..+..++...+...+++ -++|.+.+.|.|+++.|-..|+.+|..+++.
T Consensus 383 ~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~ 437 (458)
T d1ibrb_ 383 DAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICEL 437 (458)
T ss_dssp HHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999975477678988999999999884899899999999999999997
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.95 E-value=1.1e-06 Score=55.77 Aligned_cols=246 Identities=9% Similarity=0.100 Sum_probs=128.4
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC-EEEEE-ECCCCEEEEECCC
Q ss_conf 555899907997999992999799993998864421111058741697327999924997-99999-1799499998011
Q 000470 1060 AVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA-QVVVG-ACDGIIHMFSVDH 1137 (1472)
Q Consensus 1060 ~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~-~las~-s~DG~I~iwdi~~ 1137 (1472)
.-..++++++++.+++-...+.|++||... +....+.....-.........+++..+.. .+++. +.++.|..++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY- 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred CCCEEEECCCCCEEEEECCCCEEEEEECCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC-
T ss_conf 900799949998999979989899996999-999981665788664226630001234455200004775310000025-
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEE
Q ss_conf 24688864334685452330279985899997137998721999995897499995998986540004787665389999
Q 000470 1138 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~ 1217 (1472)
+. ..+............++..++ +.++++....+.+.++|.. ++...++....+...+..+++
T Consensus 102 -----g~--------~~~~~~~~~~~~p~~~avd~~---G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~ 164 (279)
T d1q7fa_ 102 -----GQ--------FVRKFGATILQHPRGVTVDNK---GRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVV 164 (279)
T ss_dssp -----SC--------EEEEECTTTCSCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEE
T ss_pred -----CC--------CEEECCCCCCCCCCEECCCCC---CCEEEEEECCCEEEEECCC-CCEEECCCCCCCCCCCCEEEE
T ss_conf -----63--------024038886425420000147---8479996326325676268-750100220010256624320
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CCCCCEEEEEECCCCCCCCCCCCCCEEEEEE-C-CCEEEEEECCCC
Q ss_conf 699989999937993999978999510067415-6677204784259999744468999799998-6-994999986887
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G-CNEVSLWNAENG 1294 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas-~-dg~V~VWDl~tg 1294 (1472)
+++++.+++....+.|.+||.. +..+..+... .......+++ .+.+ + ++++. . +..|.+|+. +|
T Consensus 165 d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giav-D~~G---------~-i~Vad~~~~~~v~~f~~-~G 231 (279)
T d1q7fa_ 165 NDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGI-NSNG---------E-ILIADNHNNFNLTIFTQ-DG 231 (279)
T ss_dssp CSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEE-CTTC---------C-EEEEECSSSCEEEEECT-TS
T ss_pred CCCEEEEEEECCCCCEEEEECC-CCEEEEECCCCCCCCCCCCCC-CCCC---------E-EEEEECCCCCEEEEECC-CC
T ss_conf 1200178620135510023047-944453011321148762323-1478---------6-99997899808999999-99
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCEE
Q ss_conf 17789861358898766877632358898899975332344533222344899988678158344899918981699909
Q 000470 1295 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKI 1374 (1472)
Q Consensus 1295 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~~p~g~LiTgg~Dg~I 1374 (1472)
+....+..... ....+.++..++|.++.+..+++|
T Consensus 232 ~~~~~~~~~~~---------------------------------------------~~~p~~vav~~dG~l~V~~~n~~v 266 (279)
T d1q7fa_ 232 QLISALESKVK---------------------------------------------HAQCFDVALMDDGSVVLASKDYRL 266 (279)
T ss_dssp CEEEEEEESSC---------------------------------------------CSCEEEEEEETTTEEEEEETTTEE
T ss_pred CEEEEEECCCC---------------------------------------------CCCEEEEEEECCCCEEEEECCCEE
T ss_conf 99999968888---------------------------------------------898837999089919999189969
Q ss_pred EEEECCCC
Q ss_conf 99739999
Q 000470 1375 RRWDHCSP 1382 (1472)
Q Consensus 1375 riWDl~~~ 1382 (1472)
++|.....
T Consensus 267 ~~fr~~~~ 274 (279)
T d1q7fa_ 267 YIYRYVQL 274 (279)
T ss_dssp EEEECSCC
T ss_pred EEEEEEEE
T ss_conf 99872203
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.88 E-value=1.9e-06 Score=54.35 Aligned_cols=272 Identities=9% Similarity=-0.018 Sum_probs=135.4
Q ss_pred CCCC-CCCEEEECC-CCCCCEEEEEECCCCC--EEEEEECCCC-----------------EEEEECCCCCCCCCCCCCEE
Q ss_conf 8555-653634511-2345555899907997--9999929997-----------------99993998864421111058
Q 000470 1043 GWRP-RGILVAHLQ-EHCSAVNEIAISHDHS--FFVSASDDST-----------------VKVWDSRKLEKDISFRSRLT 1101 (1472)
Q Consensus 1043 ~W~p-~G~lV~~L~-~H~~~V~~iafspd~~--~lvSgS~DGt-----------------VkIWD~~~~e~~~~~~s~~t 1101 (1472)
.|++ .++....+. .+...+..++|+|+++ |++..+.+.. +..+|..+++ ...+
T Consensus 98 vIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~------v~~q 171 (441)
T d1qnia2 98 RIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD------VAWQ 171 (441)
T ss_dssp EEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCS------EEEE
T ss_pred EEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE------EEEE
T ss_conf 9988778475579567887864348705699899995667754436766300145553238866375560------6478
Q ss_pred EECCCCCEEEEEEECCCCEEEEEECCCC-EEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEE
Q ss_conf 7416973279999249979999917994-999980112468886433468545233027998589999713799872199
Q 000470 1102 YHLEGSRALCTMMLRHSAQVVVGACDGI-IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1180 (1472)
Q Consensus 1102 ~~~~~~~I~~i~f~~~~~~las~s~DG~-I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~L 1180 (1472)
.... +....+.|++++.++++++.+.. +..++.. .... ...+...+. -....+.++ |+.+
T Consensus 172 I~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~--t~~~--------~d~i~v~n~-----p~~~~~~~d---Gk~~ 232 (441)
T d1qnia2 172 VIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGT--MRND--------RDWVVVFNV-----ERIAAAVKA---GNFK 232 (441)
T ss_dssp EEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHH--TCSS--------BCEEEEEEH-----HHHHHHHHT---TCCB
T ss_pred EECC-CCCCCEEECCCCCEEEEEECCCCCEEEEECC--CCCE--------EEEEEECCC-----CCEEEEECC---CCEE
T ss_conf 7369-9865469879999899985178731898515--7121--------789996885-----110799669---9999
Q ss_pred EEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEE
Q ss_conf 99958974999959989865400047876653899996999899-99937993999978999510067415667720478
Q 000470 1181 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF-VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1259 (1472)
Q Consensus 1181 v~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~L-vsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~ 1259 (1472)
+.+.++.+.+++.........+.. ...+..+.++|+|.++ ++|..++++.+||+...... +. ....+...+.
T Consensus 233 -~v~~~~v~vvd~~~~~~v~~~IPv---gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~--~~-~~~~~~~~~~ 305 (441)
T d1qnia2 233 -TIGDSKVPVVDGRGESEFTRYIPV---PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL--FE-DKIELRDTIV 305 (441)
T ss_dssp -CCTTCCCCEEECSSSCSSEEEECC---BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH--TT-TSSCGGGGEE
T ss_pred -EECCCCCEEEECCCCCCEEEEEEC---CCCCCCCEECCCCCEEEEECCCCCCEEEEEEEHHHHH--HH-CCCCCCEEEE
T ss_conf -969998289980368706899717---9886672689998789990775993899983224457--52-5688424799
Q ss_pred EECCCCC----CCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4259999----744468999799998699499998688717789861358898766877632358898899975332344
Q 000470 1260 LFVPPPN----AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV 1335 (1472)
Q Consensus 1260 ~~~p~~~----~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1335 (1472)
. .+... ...+..++....+...|..|..|++.... +.+..... . ...
T Consensus 306 ~-~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~--~~~~~~~~--~----------------------~v~-- 356 (441)
T d1qnia2 306 A-EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAI--KHYNGDRV--N----------------------YIR-- 356 (441)
T ss_dssp E-CCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHH--HHHTTCCC--C----------------------CEE--
T ss_pred E-ECCCCCCCCCCEECCCCEEEECCCCCCEEEEECCCHHH--HHHCCCCC--C----------------------EEE--
T ss_conf 6-01455476652265785599852443168972354221--33226777--6----------------------568--
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCEEEEEEC
Q ss_conf 5332223448999886781583448999-1898169990999739
Q 000470 1336 NQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDH 1379 (1472)
Q Consensus 1336 ~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~LiTgg~Dg~IriWDl 1379 (1472)
+. ....-..+|...+.+..++|+| +|+++.--.+=|++.+
T Consensus 357 -~~---~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~~~~ 397 (441)
T d1qnia2 357 -QK---LDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPV 397 (441)
T ss_dssp -EE---EECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGSCCC
T ss_pred -EC---CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf -64---532668987752454223898848996574442557678
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=1.8e-09 Score=73.92 Aligned_cols=143 Identities=14% Similarity=0.198 Sum_probs=96.2
Q ss_pred HHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHH---HHH
Q ss_conf 822999996899999834300000138656553--212222213569875689999710241445304311457---478
Q 000470 592 LVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND--FLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEE---YLL 666 (1472)
Q Consensus 592 ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd--~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~---~il 666 (1472)
.+.+.+.+..+|.+.+..+..++.-+|.....+ -+|+.++..+++. ..|.+-...+..++.......++. -++
T Consensus 572 ~l~~~~~~~e~~~~al~~l~~l~~~~~~~~~~~~~~~l~~l~~~l~~~--~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~ 649 (1207)
T d1u6gc_ 572 RLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNE--ITRLTTVKALTLIAGSPLKIDLRPVLGEGV 649 (1207)
T ss_dssp HHSCSSSCHHHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHTTSS--SHHHHHHHHHHHHTTCSSCCCCHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 987313101788989999998988765565888888877788874230--457999999999987313214789998888
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 8897631798148899999999999981--988257899999853222346869999999999999970489
Q 000470 667 PYIEQALSDATEAVIVNALDCLAILCKS--GYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLG 736 (1472)
Q Consensus 667 Pll~q~L~D~eE~Vv~~~l~~l~~l~~~--gLl~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~ 736 (1472)
|.+...|.+..+.+-..++.+|..+++. +-+.+..+-.++....+++.+.+..+|+.++.++..+.+..+
T Consensus 650 ~~l~~~l~~~~~~~r~~al~~L~~l~~~~~~~~~~~~~~~~l~~l~~ll~~~d~~v~~~~l~~l~~l~~~~~ 721 (1207)
T d1u6gc_ 650 PILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYP 721 (1207)
T ss_dssp HHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHTTCGGGSCTTCHHHHHHHHHHHHHHTTSCG
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 898775014438899999999999998454210067776677763244434407889999999888886263
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.79 E-value=2.3e-06 Score=53.74 Aligned_cols=210 Identities=11% Similarity=0.043 Sum_probs=125.5
Q ss_pred CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 36345112345555899907997999992999799993998864421111058741697327999924997999991799
Q 000470 1049 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1128 (1472)
Q Consensus 1049 ~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG 1128 (1472)
+.++.+.... .+..++++|||+++++...+++|..||... + ...+....+.+.+++|.++++.+++...++
T Consensus 19 ~v~~~~p~~~-~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~-------~~~~~~~~~~~~gla~~~dG~l~v~~~~~~ 89 (302)
T d2p4oa1 19 KIITSFPVNT-FLENLASAPDGTIFVTNHEVGEIVSITPDG-N-------QQIHATVEGKVSGLAFTSNGDLVATGWNAD 89 (302)
T ss_dssp EEEEEECTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTC-C-------EEEEEECSSEEEEEEECTTSCEEEEEECTT
T ss_pred CEEEECCCCC-CCCCEEECCCCCEEEEECCCCEEEEEECCC-C-------EEEEECCCCCCCEEEECCCCCEEEEECCCC
T ss_conf 0788888998-847877999988999968899899990899-8-------899971799853689867788699832895
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEE----
Q ss_conf 4999980112468886433468545233027998589999713799872199999589749999599898654000----
Q 000470 1129 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK---- 1204 (1472)
Q Consensus 1129 ~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~---- 1204 (1472)
.+..|+..... + ..........+.....+.+.++ ++++++...++.+..+|...+.....+.
T Consensus 90 ~~~~~~~~~~~---~--------~~~~~~~~~~~~~~n~i~~~~~---g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 155 (302)
T d2p4oa1 90 SIPVVSLVKSD---G--------TVETLLTLPDAIFLNGITPLSD---TQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 155 (302)
T ss_dssp SCEEEEEECTT---S--------CEEEEEECTTCSCEEEEEESSS---SEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred EEEEEEECCCC---C--------CEEECCCCCCCCCCCEEEECCC---CCEEEECCCCCCCEEEECCCCCCEEEECCCCC
T ss_conf 37888710111---1--------0121023578632216677157---97875035655410242168730367518864
Q ss_pred ----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC-CCCCCCEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf ----478766538999969998999993799399997899951006741-566772047842599997444689997999
Q 000470 1205 ----AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-SQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1205 ----~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~-~~~~~I~~l~~~~p~~~~~~~s~~~~~i~v 1279 (1472)
.......+..+.++. +..+++.+..+.+..+|............ ........+.+ ..++.+.++
T Consensus 156 ~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~----------d~dG~l~va 224 (302)
T d2p4oa1 156 ARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAF----------DVEGNLYGA 224 (302)
T ss_dssp SCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEE----------BTTCCEEEE
T ss_pred CEEECCCCCCCCCCCCCCC-CCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE----------CCCCCEEEE
T ss_conf 0143157632243201169-83044037887698634433332345310158998752378----------799999999
Q ss_pred EECCCEEEEEECC
Q ss_conf 9869949999868
Q 000470 1280 AAGCNEVSLWNAE 1292 (1472)
Q Consensus 1280 as~dg~V~VWDl~ 1292 (1472)
...++.|..++..
T Consensus 225 ~~~~~~V~~i~p~ 237 (302)
T d2p4oa1 225 THIYNSVVRIAPD 237 (302)
T ss_dssp CBTTCCEEEECTT
T ss_pred ECCCCCEEEECCC
T ss_conf 7489918998789
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=2.5e-08 Score=66.58 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=15.3
Q ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 2422311210234886036789999999762
Q 000470 455 LQRVLPHVIAMLSDPAAIVRCAALETLCDIL 485 (1472)
Q Consensus 455 LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L 485 (1472)
+..++|.++..+.|....||..++.++..++
T Consensus 369 ~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~ 399 (1207)
T d1u6gc_ 369 YKTVSPALISRFKEREENVKADVFHAYLSLL 399 (1207)
T ss_dssp HTTTHHHHHSTTSCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999845985489999999999999
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.69 E-value=8e-06 Score=50.24 Aligned_cols=185 Identities=10% Similarity=0.029 Sum_probs=99.9
Q ss_pred CCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEE
Q ss_conf 55565363451123455558999079979999929997999939988644211110587416973279999249979999
Q 000470 1044 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1123 (1472)
Q Consensus 1044 W~p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las 1123 (1472)
|+|.|... .+....+.+++++|+++++++++...++.+..|+........ ..............+++.++++.+++
T Consensus 54 i~p~g~~~-~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~n~i~~~~~g~~~v~ 129 (302)
T d2p4oa1 54 ITPDGNQQ-IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV---ETLLTLPDAIFLNGITPLSDTQYLTA 129 (302)
T ss_dssp ECTTCCEE-EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE---EEEEECTTCSCEEEEEESSSSEEEEE
T ss_pred EECCCCEE-EEECCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCE---EECCCCCCCCCCCEEEECCCCCEEEE
T ss_conf 90899889-997179985368986778869983289537888710111101---21023578632216677157978750
Q ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE
Q ss_conf 91799499998011246888643346854523302799858999971379987219999958974999959989865400
Q 000470 1124 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1203 (1472)
Q Consensus 1124 ~s~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l 1203 (1472)
.+.++.+..++..... ......... ...............+.+.. +.++++.+..+.|..+|+.........
T Consensus 130 ~~~~~~i~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~ngi~~~~----~~l~~~~~~~~~i~~~~~~~~~~~~~~ 201 (302)
T d2p4oa1 130 DSYRGAIWLIDVVQPS---GSIWLEHPM-LARSNSESVFPAANGLKRFG----NFLYVSNTEKMLLLRIPVDSTDKPGEP 201 (302)
T ss_dssp ETTTTEEEEEETTTTE---EEEEEECGG-GSCSSTTCCSCSEEEEEEET----TEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCCCCCEEEECCCCC---CEEEECCCC-CCEEECCCCCCCCCCCCCCC----CCEEEECCCCCEEEECCCCCCCCCCCC
T ss_conf 3565541024216873---036751886-40143157632243201169----830440378876986344333323453
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 0478766538999969998999993799399997899
Q 000470 1204 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF 1240 (1472)
Q Consensus 1204 ~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~ 1240 (1472)
......+.+..++++++|+..++...++.|..|+..-
T Consensus 202 ~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G 238 (302)
T d2p4oa1 202 EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 238 (302)
T ss_dssp EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCCCEEEECCCC
T ss_conf 1015899875237879999999974899189987899
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.69 E-value=4.1e-07 Score=58.65 Aligned_cols=295 Identities=14% Similarity=0.137 Sum_probs=143.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCC---CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 780239999999999703699200---12422311210234886036789999999762446101899876542121223
Q 000470 430 KLPHYRRAAILLLKSSSLFIDDED---RLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPM 506 (1472)
Q Consensus 430 ~~~~sk~~~l~ll~~~~~~~~de~---~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~ 506 (1472)
.....+..|+..+..+++..+.+. .++-++|.++.++.|+++.||..|+.++.++......... +...++.. ++.
T Consensus 381 ~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~-~~~~~~~l-l~~ 458 (861)
T d2bpta1 381 DNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESID-PQQHLPGV-VQA 458 (861)
T ss_dssp SSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSC-TTTTHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHH-HHH
T ss_conf 7778888899899998841026668887899999998873376205666898899999998130100-47762045-689
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH-------HHH
Q ss_conf 57999999831467788306999999999---------99999975210344446899999999974200-------110
Q 000470 507 LSMLPDDPEESVRICYASNIAKLALTAYG---------FLVHSIRLSEAGVLDKLSAPHKSPSSSNETSV-------QLQ 570 (1472)
Q Consensus 507 l~~l~~d~~~~vr~~~A~~l~~LA~~a~r---------fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 570 (1472)
+.....+ +..|+...+..+..+.+.... +......+- ....... ....... ...
T Consensus 459 l~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~----~~~~~~~~~~~al~~~i 528 (861)
T d2bpta1 459 CLIGLQD-HPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLI-----GAANRID----NEFNARASAFSALTTMV 528 (861)
T ss_dssp HHHHHTS-CHHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHH-----HHHTCSC----CGGGHHHHHHHHHHHHH
T ss_pred HHHCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-----HHHHHHH----HHHHHHHHHHHHHHHHH
T ss_conf 9860246-708999999999999987523022114688754788999-----9874212----34899999999899999
Q ss_pred -CCCH--HHHHHHHHHHHHHHHHHHHCCCCC--CH-------HHHHHHHHCCCCHHCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf -2570--889999999999999998229999--96-------899999834300000138656--553212222213569
Q 000470 571 -RLNA--DVQLSQLRKSIAEVVQELVMGPKQ--TP-------SIRRALLQDIGNLCSFFGQRQ--SNDFLLPILPAFLND 636 (1472)
Q Consensus 571 -~~~~--~~~l~~l~~~i~~~v~~ll~~~~~--~~-------~vk~all~~i~~Lc~FFG~~k--tnd~iLshliT~LNd 636 (1472)
.... ...+..+...+.+.+...+..... .. .++..++.-+..++..++..- -.+-++..++..+++
T Consensus 529 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 608 (861)
T d2bpta1 529 EYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEK 608 (861)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 98688889999999999999999999888654116677679999999999999998615365799999999997510015
Q ss_pred -CCHHHHHHHHHCCCEEEEEECCCHHHHH---HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCC
Q ss_conf -8756899997102414453043114574---7888976317981488999999999999819-8825789999985322
Q 000470 637 -RDEQLRAVFYGQIVYVCFFVGERSVEEY---LLPYIEQALSDATEAVIVNALDCLAILCKSG-YLRKRILLEMIERAFP 711 (1472)
Q Consensus 637 -~d~~LR~aff~~i~~v~~~vG~~s~e~~---ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~g-Ll~k~~~~~~~~~~~~ 711 (1472)
.++.+|...+..+..++..+|... +.| ++|.+.++|.|.++.|...++..+..+++.. -.-+++.-+++.....
T Consensus 609 ~~~~~v~~~~l~~l~~l~~~~~~~~-~~~l~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~~~~~~~~~i~~~L~~ 687 (861)
T d2bpta1 609 KDSAFIEDDVFYAISALAASLGKGF-EKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQ 687 (861)
T ss_dssp TTGGGTHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8836588789999988887745789-999999705999873799889999999999999997578727119999999999
Q ss_pred CCCCCC--HHHHHHHHHHHHHHHHCCCC
Q ss_conf 234686--99999999999999704894
Q 000470 712 LLCYPS--QWVRRSVVTFIAASSESLGA 737 (1472)
Q Consensus 712 ll~HPn--~wIR~~~~~~i~~~~~~l~~ 737 (1472)
.+-.|| .=+|.+++..+..++..++.
T Consensus 688 ~l~~~~~~~~~k~~~~~~l~~i~~~~~~ 715 (861)
T d2bpta1 688 MISNPNARRELKPAVLSVFGDIASNIGA 715 (861)
T ss_dssp HHHCTTCCTTHHHHHHHHHHHHHHHHGG
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8578888899999999999999999879
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=6.7e-08 Score=63.74 Aligned_cols=298 Identities=18% Similarity=0.086 Sum_probs=132.2
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC--CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 3268888431026780239999999999703699200--12422311210234886036789999999762446101899
Q 000470 417 LIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDED--RLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 494 (1472)
Q Consensus 417 i~ls~i~s~~R~~~~~~sk~~~l~ll~~~~~~~~de~--~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~ 494 (1472)
.++.++...+.+- .+..|-.|+-.+-++++-..+.. .|+.++|+++.++.|+.+.||..|+.+|.++...+ .+.
T Consensus 395 ~~l~~l~~~l~s~-~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~---~~~ 470 (888)
T d1qbkb_ 395 HILPLLKELLFHH-EWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWV---VSQ 470 (888)
T ss_dssp HHHHHHHHTTTSS-SHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHH---HSS
T ss_pred HHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH---HHH
T ss_conf 9999988751220-568999999986435555787742120355679998426998999999999999999986---654
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 87654212122357999999831467788306999999999999-----9997521034444689999999997420011
Q 000470 495 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLV-----HSIRLSEAGVLDKLSAPHKSPSSSNETSVQL 569 (1472)
Q Consensus 495 ~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1472)
...-|-+-++|.|-....|++..||.+-+.+|..|++.+..-+. +.+.+-. .+.. . .....
T Consensus 471 ~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~--~l~~---~---------~~~~~ 536 (888)
T d1qbkb_ 471 PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVF--AFSK---Y---------QHKNL 536 (888)
T ss_dssp CHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHH--HTTT---C---------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH---H---------HHHHH
T ss_conf 15655455589999884289878999899999999987553113579999999999--9860---0---------37799
Q ss_pred -H--------------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCC------CCCCC
Q ss_conf -0--------------25708899999999999999982299999689999983430000013865655------32122
Q 000470 570 -Q--------------RLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSN------DFLLP 628 (1472)
Q Consensus 570 -~--------------~~~~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktn------d~iLs 628 (1472)
. ..+....++.+...+.+.... +. ++ ......+++.++.++..+|..-.. +-++.
T Consensus 537 ~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~--~~-~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~ 612 (888)
T d1qbkb_ 537 LILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNM-LK--DE-DKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVN 612 (888)
T ss_dssp HHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTT-SC--TT-CTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-CC--CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999986231013367999999999999975-12--10-68899999999999998678776569999999998
Q ss_pred CCCC-------------CCCCCCHHHHHHHHHCCCEEEEEECCCHHHHH-----HHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 2221-------------35698756899997102414453043114574-----78889763179814889999999999
Q 000470 629 ILPA-------------FLNDRDEQLRAVFYGQIVYVCFFVGERSVEEY-----LLPYIEQALSDATEAVIVNALDCLAI 690 (1472)
Q Consensus 629 hliT-------------~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~-----ilPll~q~L~D~eE~Vv~~~l~~l~~ 690 (1472)
.+.. ...+.|.......++.+.+++..+|... ++| ++|++.+++.|...-|-..++..+..
T Consensus 613 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~-~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgd 691 (888)
T d1qbkb_ 613 LVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNI-EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGD 691 (888)
T ss_dssp HHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTT-HHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 899899999987416201100068899999999888998730566-6666585699999999679976899999999887
Q ss_pred HHHC-CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9981-9882578999998532223468699999999999999704894
Q 000470 691 LCKS-GYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGA 737 (1472)
Q Consensus 691 l~~~-gLl~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~~ 737 (1472)
+++. +---++++-+++.....-|-+++.=++..++.-+..++..++.
T Consensus 692 l~~~~~~~~~~~l~~~~~~l~~~L~~~~~~v~~~a~~~ig~ia~~~~~ 739 (888)
T d1qbkb_ 692 LTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGI 739 (888)
T ss_dssp HHHHCGGGTGGGHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 787516877877999999999873867789999999999999998779
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.59 E-value=1.5e-05 Score=48.43 Aligned_cols=197 Identities=8% Similarity=0.026 Sum_probs=101.4
Q ss_pred CCEEEEEECCCCCEEEEE-ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
Q ss_conf 555589990799799999-2999799993998864421111058741697327999924997999991799499998011
Q 000470 1059 SAVNEIAISHDHSFFVSA-SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDH 1137 (1472)
Q Consensus 1059 ~~V~~iafspd~~~lvSg-S~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iwdi~~ 1137 (1472)
-.-..++++++|..+++. +..+.+..++....... ..... .......+++.++++.+++....+.+++++-..
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-----~~~~~-~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~ 87 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-----VLPFN-GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN 87 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEE-----ECCCC-SCCSCCCEEECTTCCEEEEETTTEEEEECTTCS
T ss_pred CCCCEEEECCCCCEEEEECCCCCEEEEECCCCCEEE-----EECCC-CCCCCEEEEECCCCCEEEEEEEECEEEEEEECC
T ss_conf 987889996999999997189988999938996689-----74369-866840899938998898631000035542112
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEE
Q ss_conf 24688864334685452330279985899997137998721999995897499995998986540004787665389999
Q 000470 1138 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1217 (1472)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~ 1217 (1472)
...............++++++ ++++++-.....+..++...... +.... .....+.++++
T Consensus 88 ---------------~~~~~~~~~~~~p~~iavd~~---g~i~v~d~~~~~~~~~~~~~~~~-~~~~~-~~~~~p~~i~~ 147 (260)
T d1rwia_ 88 ---------------NQTVLPFDGLNYPEGLAVDTQ---GAVYVADRGNNRVVKLAAGSKTQ-TVLPF-TGLNDPDGVAV 147 (260)
T ss_dssp ---------------CCEECCCCSCCSEEEEEECTT---CCEEEEEGGGTEEEEECTTCSSC-EECCC-CSCCSCCEEEE
T ss_pred ---------------CEEEEEEEEEEECCCCCCCCC---CEEEEECCCCCCCCCCCCCCCEE-EEEEE-CCCCCCCEEEE
T ss_conf ---------------000000100000000024553---20575033555321123222201-22320-36677520545
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECC
Q ss_conf 699989999937993999978999510067415667720478425999974446899979999869949999868
Q 000470 1218 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1218 sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWDl~ 1292 (1472)
+++++.+++....+.|..+|....... .+....-.....+++ .+.+ .+.++-..++.|..++..
T Consensus 148 ~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~gi~~-d~~g---------~l~vsd~~~~~i~~~~~~ 211 (260)
T d1rwia_ 148 DNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAV-DEAG---------TVYVTEHNTNQVVKLLAG 211 (260)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEE-CTTC---------CEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCEEE-EEECCCCCCCCCCEE-EEEE---------EEEEEECCCCEEEEEECC
T ss_conf 489988641025643322234310012-221011478763123-1000---------134321489989999699
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.43 E-value=2.2e-07 Score=60.34 Aligned_cols=272 Identities=14% Similarity=0.109 Sum_probs=160.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6780239999999999703699200124----223112102348860367899999997624461018998765421212
Q 000470 429 VKLPHYRRAAILLLKSSSLFIDDEDRLQ----RVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYIL 504 (1472)
Q Consensus 429 ~~~~~sk~~~l~ll~~~~~~~~de~~Ld----rilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYil 504 (1472)
-....-|..|+..+..+..++.+....+ .+++-+...+.+..+.||..|+.++..+.... ++++.
T Consensus 192 ~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~-----------~~~~~ 260 (861)
T d2bpta1 192 ETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKY-----------YTFMK 260 (861)
T ss_dssp CCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHH-----------GGGCH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----------HHHHH
T ss_conf 4789999999999999999876767766654477776798856998999999999999998877-----------89999
Q ss_pred CCC--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
Q ss_conf 235--------799999983146778830699999999999999975210344446899999999974200110257088
Q 000470 505 PML--------SMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADV 576 (1472)
Q Consensus 505 P~l--------~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (1472)
|.+ .....+.++.||....+.+..+++....+......... .....++.
T Consensus 261 ~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~~---------------------~~~~~~~~-- 317 (861)
T d2bpta1 261 PYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQ---------------------SPLQSYNF-- 317 (861)
T ss_dssp HHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---------------------CSCCCCCH--
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHH--
T ss_conf 9999899999998732754999999999999999999889999986203---------------------67899999--
Q ss_pred HHHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE
Q ss_conf 99999999999999982299-----9996899999834300000138656553212222213569875689999710241
Q 000470 577 QLSQLRKSIAEVVQELVMGP-----KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVY 651 (1472)
Q Consensus 577 ~l~~l~~~i~~~v~~ll~~~-----~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~ 651 (1472)
....+...+...+ ..+... +.+..++.+...-+..++..+|.+ ....+++.+..++++.||..|-+.+..+..
T Consensus 318 ~~~~l~~i~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 395 (861)
T d2bpta1 318 ALSSIKDVVPNLL-NLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNH-ILEPVLEFVEQNITADNWRNREAAVMAFGS 395 (861)
T ss_dssp HHHHHHHHHHHHH-HHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999-99887302444014778888999988877603314-665411113542001777888889989999
Q ss_pred EEEEECCCHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC--CCCHH-HHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 445304311457---47888976317981488999999999999819--88257-8999998532223468699999999
Q 000470 652 VCFFVGERSVEE---YLLPYIEQALSDATEAVIVNALDCLAILCKSG--YLRKR-ILLEMIERAFPLLCYPSQWVRRSVV 725 (1472)
Q Consensus 652 v~~~vG~~s~e~---~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~g--Ll~k~-~~~~~~~~~~~ll~HPn~wIR~~~~ 725 (1472)
++...+...++. -++|.+.+.|.|+++.|...++.++..+++.- .+.+. .+-.++... --.+..+..+++.+.
T Consensus 396 i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~ll~~l-~~~~~~~~~~~~~~~ 474 (861)
T d2bpta1 396 IMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQAC-LIGLQDHPKVATNCS 474 (861)
T ss_dssp TSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHH-HHHHTSCHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHH
T ss_conf 8841026668887899999998873376205666898899999998130100477620456899-860246708999999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999999704894
Q 000470 726 TFIAASSESLGA 737 (1472)
Q Consensus 726 ~~i~~~~~~l~~ 737 (1472)
..+......+..
T Consensus 475 ~~~~~l~~~~~~ 486 (861)
T d2bpta1 475 WTIINLVEQLAE 486 (861)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHHHHHHHHHHH
T ss_conf 999999987523
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=2.1e-06 Score=54.03 Aligned_cols=89 Identities=19% Similarity=0.186 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999703699200124223112102348860367899999997624461-018998765421212235799999983
Q 000470 438 AILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVR-NFPPSDAKIFPEYILPMLSMLPDDPEE 516 (1472)
Q Consensus 438 ~l~ll~~~~~~~~de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~-~~~~~~~~iF~eYilP~l~~l~~d~~~ 516 (1472)
+...|-.+++...++ .+..++|++...+.+++..+|-+|+.++..+..-+. .+.| +-+-++|.|..+..|++.
T Consensus 377 a~~~L~~l~~~~~~~-il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~-----~l~~li~~l~~~l~d~~~ 450 (888)
T d1qbkb_ 377 SAAALDVLANVYRDE-LLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIP-----YLPELIPHLIQCLSDKKA 450 (888)
T ss_dssp HHHHSTTTTTTCCSS-SHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTT-----THHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHHHHHHHHHCCCCCH
T ss_conf 999876676512999-99999999887512205689999999864355557877421-----203556799984269989
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 1467788306999999
Q 000470 517 SVRICYASNIAKLALT 532 (1472)
Q Consensus 517 ~vr~~~A~~l~~LA~~ 532 (1472)
.||.+-+.||+.+++.
T Consensus 451 ~Vr~~a~~~l~~~~~~ 466 (888)
T d1qbkb_ 451 LVRSITCWTLSRYAHW 466 (888)
T ss_dssp HHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999998
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=5.2e-05 Score=44.92 Aligned_cols=132 Identities=11% Similarity=0.029 Sum_probs=58.6
Q ss_pred HHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHH---HHHHHHHHHHCCCC
Q ss_conf 689999983430000013865655321222221356987568999971024144530431145---74788897631798
Q 000470 600 PSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVE---EYLLPYIEQALSDA 676 (1472)
Q Consensus 600 ~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e---~~ilPll~q~L~D~ 676 (1472)
..++.+...-+..++..+|. ..-+.+++.+-..+++.+|.-|-+....+..++...+...++ .-++|.+.+.+.|+
T Consensus 342 ~~~~~~a~~~l~~l~~~~~~-~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~ 420 (876)
T d1qgra_ 342 WNPCKAAGVCLMLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP 420 (876)
T ss_dssp CCHHHHHHHHHHHHHHHHGG-GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 13999999999999987366-65355678999860251378889999988766643229889899999999999861578
Q ss_pred CHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1488999999999999819---88257899999853222346869999999999999970
Q 000470 677 TEAVIVNALDCLAILCKSG---YLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSE 733 (1472)
Q Consensus 677 eE~Vv~~~l~~l~~l~~~g---Ll~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~ 733 (1472)
...|...++.++..+++.- ......+-.++..... .+..+.-++..++..+.....
T Consensus 421 ~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~v~~~~~~~l~~l~~ 479 (876)
T d1qgra_ 421 SVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIE-GLSAEPRVASNVCWAFSSLAE 479 (876)
T ss_dssp SHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHH-HTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHH
T ss_conf 60899999988999999813111017776667999998-826987999999987889999
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.36 E-value=5.7e-05 Score=44.67 Aligned_cols=244 Identities=11% Similarity=0.135 Sum_probs=113.2
Q ss_pred EEEEEECCCCCEEEEEEC-------CCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf 558999079979999929-------9979999399886442111105874169732799992499799999179949999
Q 000470 1061 VNEIAISHDHSFFVSASD-------DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1133 (1472)
Q Consensus 1061 V~~iafspd~~~lvSgS~-------DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iw 1133 (1472)
.-.++|.++|++.++... +|+|..||..+......... ......+.-..+.|.++++.++++...+.|..+
T Consensus 20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~--~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP--EVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC--EETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECC--CCCCCCCCCEEEEEECCCCEEEEEECCCEEEEE
T ss_conf 717399699999999875402345299999998999959999777--655678853069990799989999779839999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCEEECCCCCC---EEEEEEECCCCCCCEEEEEEEC---------------CCEEEEEECC
Q ss_conf 801124688864334685452330279985---8999971379987219999958---------------9749999599
Q 000470 1134 SVDHISRGLGNVEKYSGISDIKKKDTKEGA---IVTLVNYNTDNCASHMFMYSTQ---------------NCGIHLWDTR 1195 (1472)
Q Consensus 1134 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~d~~s~~~Lv~at~---------------dg~I~iwDlr 1195 (1472)
+.+.... .+.. ....+. ....+.++++ |.+.++-.. .|.|..++..
T Consensus 98 ~~~g~~~------------~~~~-~~~~g~~~~~pndl~~d~~---G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d 161 (314)
T d1pjxa_ 98 QTDGTFE------------EIAK-KDSEGRRMQGCNDCAFDYE---GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp ETTSCEE------------ECCS-BCTTSCBCBCCCEEEECTT---SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred ECCCCEE------------EEEE-CCCCCCCCCCCCEEEECCC---CCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEC
T ss_conf 4777479------------9973-3432454578727898889---9899914866754320110002688438999525
Q ss_pred CCCCCCEEECCCCCCCEEEEEECCCCC-----EEEEEECCCCEEEEECCCCCCCCEEEC----C--CCCCCEEEEEECCC
Q ss_conf 898654000478766538999969998-----999993799399997899951006741----5--66772047842599
Q 000470 1196 SNSNTWTLKAIPEEGYVSSLVTGPCGN-----WFVSGSSRGVLTLWDLRFLVPVNSWQY----S--QVCPIEKMCLFVPP 1264 (1472)
Q Consensus 1196 t~~~~~~l~~~~h~g~Itsi~~sp~g~-----~LvsGssdG~I~lWDlR~~~~i~s~~~----~--~~~~I~~l~~~~p~ 1264 (1472)
++... +.. .....+.++|++++. ..++-+..+.|..||+.....+..... + .......+++
T Consensus 162 -g~~~~-~~~--~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiav---- 233 (314)
T d1pjxa_ 162 -GQMIQ-VDT--AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF---- 233 (314)
T ss_dssp -SCEEE-EEE--EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE----
T ss_pred -CCEEE-EEC--CCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEE----
T ss_conf -74037-507--8532213699788776303799986024311776116765430156899713356664102578----
Q ss_pred CCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99744468999799998699499998688717789861358898766877632358898899975332344533222344
Q 000470 1265 PNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1344 (1472)
Q Consensus 1265 ~~~~~~s~~~~~i~vas~dg~V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1344 (1472)
..++++.++..+.+.|.+||.+.+.....+....
T Consensus 234 ------D~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~---------------------------------------- 267 (314)
T d1pjxa_ 234 ------DEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF---------------------------------------- 267 (314)
T ss_dssp ------BTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS----------------------------------------
T ss_pred ------ECCCCEEEEECCCCEEEEEECCCCEEEEEEECCC----------------------------------------
T ss_conf ------3478579998279999999699997999997999----------------------------------------
Q ss_pred CCCCCCCCCCEEECCCCCC--CEEECCCCCEEEEEECCCCC
Q ss_conf 8999886781583448999--18981699909997399999
Q 000470 1345 NEPPPRLLGIRSLLPLPGG--DLLTGGTDLKIRRWDHCSPG 1383 (1472)
Q Consensus 1345 ~~~~~~~~~V~sl~~~p~g--~LiTgg~Dg~IriWDl~~~~ 1383 (1472)
....+++|.+++ .++|.+..++|...++..+.
T Consensus 268 -------~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G 301 (314)
T d1pjxa_ 268 -------EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp -------SCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred -------CCEEEEEEECCCCEEEEEECCCCCEEEEECCCCC
T ss_conf -------9878999928989999998789919999789999
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=3.3e-07 Score=59.20 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 11326888843102678023999999999970369920---012422311210234886036789999999762446101
Q 000470 415 IVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDE---DRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 491 (1472)
Q Consensus 415 ~~i~ls~i~s~~R~~~~~~sk~~~l~ll~~~~~~~~de---~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~ 491 (1472)
.-.++.++...+.+ .....|-.++..+..++.....+ ..++.++|.++.++.|+++.||.+|+.++.++.......
T Consensus 364 ~~~~~~~i~~~l~~-~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 442 (876)
T d1qgra_ 364 VPHVLPFIKEHIKN-PDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA 442 (876)
T ss_dssp HHHHHHHHHHHTTC-SSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf 35567899986025-13788899999887666432298898999999999998615786089999998899999981311
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8998765421212235799999983146778830699999999
Q 000470 492 PPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAY 534 (1472)
Q Consensus 492 ~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~ 534 (1472)
... .-+-+-+++.+.....+ ...|+...+.++..|.+...
T Consensus 443 ~~~--~~~~~~~~~~l~~~l~~-~~~v~~~~~~~l~~l~~~~~ 482 (876)
T d1qgra_ 443 AIN--DVYLAPLLQCLIEGLSA-EPRVASNVCWAFSSLAEAAY 482 (876)
T ss_dssp TSS--TTTHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
T ss_conf 101--77766679999988269-87999999987889999988
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.29 E-value=2.2e-07 Score=60.39 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=40.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 12222213569875689999710241445304---311457478889763179814889999999999998198825789
Q 000470 626 LLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG---ERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRIL 702 (1472)
Q Consensus 626 iLshliT~LNd~d~~LR~aff~~i~~v~~~vG---~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~~~ 702 (1472)
+++.+..+|...|+..+......+..++..-. ..-++.-++|.+.+.|..+...|...++.++..++...--....+
T Consensus 247 ~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~~~~ 326 (503)
T d1wa5b_ 247 ALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVV 326 (503)
T ss_dssp GHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987235638999999999875322771111001122331110110257863644567777777877888878763
Q ss_pred H--HHHHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9--99985322234686999999999999997
Q 000470 703 L--EMIERAFPLLCYPSQWVRRSVVTFIAASS 732 (1472)
Q Consensus 703 ~--~~~~~~~~ll~HPn~wIR~~~~~~i~~~~ 732 (1472)
. +++.....++-||+..||..++..++.++
T Consensus 327 ~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~ 358 (503)
T d1wa5b_ 327 INAGVLPALRLLLSSPKENIKKEACWTISNIT 358 (503)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 12340999999963997888999987788886
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.28 E-value=8.4e-05 Score=43.58 Aligned_cols=96 Identities=9% Similarity=0.062 Sum_probs=42.9
Q ss_pred ECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CCCCCEEEEEEC
Q ss_conf 5897499995998986540004787665389999699989999937993999978999510067415-667720478425
Q 000470 1184 TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFV 1262 (1472)
Q Consensus 1184 t~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~-~~~~I~~l~~~~ 1262 (1472)
+.++.|..++.. +.....+.. .....+..+++++++..+++....+.+.++|.. +..+..+... +......+.. .
T Consensus 90 ~~~~~i~~~~~~-g~~~~~~~~-~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~-d 165 (279)
T d1q7fa_ 90 SPTHQIQIYNQY-GQFVRKFGA-TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVV-N 165 (279)
T ss_dssp GGGCEEEEECTT-SCEEEEECT-TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEE-C
T ss_pred CCCCCCCCCCCC-CCCEEECCC-CCCCCCCEECCCCCCCEEEEEECCCEEEEECCC-CCEEECCCCCCCCCCCCEEEE-C
T ss_conf 775310000025-630240388-864254200001478479996326325676268-750100220010256624320-1
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECC
Q ss_conf 999974446899979999869949999868
Q 000470 1263 PPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1292 (1472)
Q Consensus 1263 p~~~~~~~s~~~~~i~vas~dg~V~VWDl~ 1292 (1472)
+. +..+++....+.|.+||..
T Consensus 166 ~~---------g~i~v~d~~~~~V~~~d~~ 186 (279)
T d1q7fa_ 166 DK---------QEIFISDNRAHCVKVFNYE 186 (279)
T ss_dssp SS---------SEEEEEEGGGTEEEEEETT
T ss_pred CC---------EEEEEEECCCCCEEEEECC
T ss_conf 20---------0178620135510023047
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.11 E-value=3.8e-06 Score=52.33 Aligned_cols=232 Identities=13% Similarity=0.094 Sum_probs=118.3
Q ss_pred CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12422311210234886036789999999762446101899876542121223579999998314677883069999999
Q 000470 454 RLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTA 533 (1472)
Q Consensus 454 ~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a 533 (1472)
....++|.++.++...++.|+..|+.+|..+...-...- ..+...-++|.|..+..+++..++..-+.+|..|+...
T Consensus 185 ~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~---~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~ 261 (434)
T d1q1sc_ 185 AVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERI---EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGT 261 (434)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHH---HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH---HHHHHCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHHH
T ss_conf 365699999999852442012567766402201234567---77763154201000023430655402122135677666
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH
Q ss_conf 99999999752103444468999999999742001102570889999999999999998229999968999998343000
Q 000470 534 YGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNL 613 (1472)
Q Consensus 534 ~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~L 613 (1472)
.++-. ......+.+.+..++. +.++.||+.-+.-+..|
T Consensus 262 ~~~~~----------------------------------------~~~~~~~~~~l~~ll~--~~~~~v~~~a~~~L~~l 299 (434)
T d1q1sc_ 262 DEQTQ----------------------------------------KVIDAGALAVFPSLLT--NPKTNIQKEATWTMSNI 299 (434)
T ss_dssp HHHHH----------------------------------------HHHHTTGGGGHHHHTT--CSSHHHHHHHHHHHHHH
T ss_pred HHHHH----------------------------------------HHHHCCCCCHHHHHHC--CCCHHHHHHHHHHHHHH
T ss_conf 67789----------------------------------------9985256405777613--64146668888788652
Q ss_pred HCCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH----HHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 00138656---5532122222135698756899997102414453043114----5747888976317981488999999
Q 000470 614 CSFFGQRQ---SNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSV----EEYLLPYIEQALSDATEAVIVNALD 686 (1472)
Q Consensus 614 c~FFG~~k---tnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~----e~~ilPll~q~L~D~eE~Vv~~~l~ 686 (1472)
|.--...+ .+.-+++.++..|++.++..|..-...|..++..-..... +.-++|.|.+.|.+.++-++..+|+
T Consensus 300 ~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~ 379 (434)
T d1q1sc_ 300 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILD 379 (434)
T ss_dssp TTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 00450457777665468999987751586889999999999983499999999998976999999865999899999999
Q ss_pred HHHHHHHCC--CCCHHHHHHH------HHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999819--8825789999------9853222346869999999999999
Q 000470 687 CLAILCKSG--YLRKRILLEM------IERAFPLLCYPSQWVRRSVVTFIAA 730 (1472)
Q Consensus 687 ~l~~l~~~g--Ll~k~~~~~~------~~~~~~ll~HPn~wIR~~~~~~i~~ 730 (1472)
+|..+++.+ .-....+.+. +...--|.-|+|.=||+.|..+|..
T Consensus 380 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~n~~i~~~a~~il~~ 431 (434)
T d1q1sc_ 380 AISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEK 431 (434)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9999999887547748999999986879999998869989999999999999
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.04 E-value=0.00026 Score=40.42 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=23.1
Q ss_pred CEEEEEEECCCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 21999995897499995998986540004787665389999699989999937993999978
Q 000470 1177 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDL 1238 (1472)
Q Consensus 1177 ~~~Lv~at~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDl 1238 (1472)
++++++...++.|..+|...... ..+.. ...+.+..++++++++.+++....+.|..++.
T Consensus 151 g~~~v~~~~~~~i~~~d~~~~~~-~~~~~-~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~ 210 (260)
T d1rwia_ 151 GNVYVTDTDNNRVVKLEAESNNQ-VVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 210 (260)
T ss_dssp CCEEEEEGGGTEEEEECTTTCCE-EECCC-SSCCSEEEEEECTTCCEEEEETTTTEEEEECT
T ss_pred CCEEEECCCCCCCCCCCCCCCEE-EEEEC-CCCCCCCCCEEEEEEEEEEEECCCCEEEEEEC
T ss_conf 98864102564332223431001-22210-11478763123100013432148998999969
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.03 E-value=1.9e-06 Score=54.28 Aligned_cols=147 Identities=10% Similarity=0.053 Sum_probs=67.7
Q ss_pred HHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC---CHH
Q ss_conf 999982299999689999983430000013865---65532122222135698756899997102414453043---114
Q 000470 588 VVQELVMGPKQTPSIRRALLQDIGNLCSFFGQR---QSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGE---RSV 661 (1472)
Q Consensus 588 ~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~---ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~---~s~ 661 (1472)
.+..++. +.++.++...+.-+..||.-.... -.+.-+++.++.++++.++.++.+....+..++..-.. .-+
T Consensus 192 ~l~~ll~--~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~ 269 (434)
T d1q1sc_ 192 TLVRLLH--HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVI 269 (434)
T ss_dssp HHHHHTT--CSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHH--CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999985--24420125677664022012345677776315420100002343065540212213567766667789998
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH--HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 5747888976317981488999999999999819882578999--99853222346869999999999999970489
Q 000470 662 EEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE--MIERAFPLLCYPSQWVRRSVVTFIAASSESLG 736 (1472)
Q Consensus 662 e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~~~~~--~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~ 736 (1472)
+.-+++.+.+-|.++..-|...++.+|..|+...--.+..+.+ ++.....++-+++.=+|..++..+..++..-+
T Consensus 270 ~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~ 346 (434)
T d1q1sc_ 270 DAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGT 346 (434)
T ss_dssp HTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSC
T ss_pred HCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 52564057776136414666888878865200450457777665468999987751586889999999999983499
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.02 E-value=0.00029 Score=40.11 Aligned_cols=176 Identities=7% Similarity=0.058 Sum_probs=79.5
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEE--EEE-CCCCEEEEE
Q ss_conf 45555899907997999992999799993998864421111058741697327999924997999--991-799499998
Q 000470 1058 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVV--VGA-CDGIIHMFS 1134 (1472)
Q Consensus 1058 ~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~la--s~s-~DG~I~iwd 1134 (1472)
...+.-++|+++++++.+++. +.+..|.+....... ...... .+.....+.++++++.+. ++. ..++|..+.
T Consensus 39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~---~~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~ 113 (365)
T d1jofa_ 39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIV---HEASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEE---EEEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCEEEECCCCCEEEEEEC-CCEEEEEEECCCCEE---EEEEEC-CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEE
T ss_conf 999777999489899999938-947899990899769---876412-899867899878998799999327997899867
Q ss_pred CCCCCCCCCCCC---CCCCCC-CCEEECCCCCCEEEEEEECCCCCCCEEEEEEE-CCCEEEEEECCCCCCC---CEEECC
Q ss_conf 011246888643---346854-52330279985899997137998721999995-8974999959989865---400047
Q 000470 1135 VDHISRGLGNVE---KYSGIS-DIKKKDTKEGAIVTLVNYNTDNCASHMFMYST-QNCGIHLWDTRSNSNT---WTLKAI 1206 (1472)
Q Consensus 1135 i~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at-~dg~I~iwDlrt~~~~---~~l~~~ 1206 (1472)
+.... ..+... ...... .........+..+..+.|+|+ +++++++. ....|.+|+....... ......
T Consensus 114 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPd---G~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T d1jofa_ 114 FYKFA-GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT---ETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp ESSSC-CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT---SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred CCCCC-CCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCC---CCEEEEEECCCCEEEEEECCCCCCEEECCCEEEC
T ss_conf 45788-7420686640330047646755688981159788899---9989982079987999970688716652511112
Q ss_pred CCCCCEEEEEECCCCCEEE-EEECCCCEEEEECCCCC
Q ss_conf 8766538999969998999-99379939999789995
Q 000470 1207 PEEGYVSSLVTGPCGNWFV-SGSSRGVLTLWDLRFLV 1242 (1472)
Q Consensus 1207 ~h~g~Itsi~~sp~g~~Lv-sGssdG~I~lWDlR~~~ 1242 (1472)
.....+..++|+|+++++. ++..++.|.+||+....
T Consensus 190 ~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~ 226 (365)
T d1jofa_ 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCC
T ss_conf 7887408999889986699951589989999955987
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.01 E-value=1e-05 Score=49.49 Aligned_cols=287 Identities=15% Similarity=0.055 Sum_probs=145.6
Q ss_pred CCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 80239999999999703699---200124223112102348860367899999997624461018998765421212235
Q 000470 431 LPHYRRAAILLLKSSSLFID---DEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPML 507 (1472)
Q Consensus 431 ~~~sk~~~l~ll~~~~~~~~---de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l 507 (1472)
...-+..|+..|-.++..-. +...-.-++|.++.++.+..+.++..++.+|..+.......+ .....+.++|.|
T Consensus 175 ~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~---~~~~~~~~l~~l 251 (503)
T d1wa5b_ 175 SVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQP---DWSVVSQALPTL 251 (503)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCC---CHHHHGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHHH
T ss_conf 71589999999999854118999988741355630120456888999999999999846874204---799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-CCCCCCCCCCCCCCCCCCCCCH---HH--HCCCHHHHH
Q ss_conf 79999998314677883069999999999999997---521-0344446899999999974200---11--025708899
Q 000470 508 SMLPDDPEESVRICYASNIAKLALTAYGFLVHSIR---LSE-AGVLDKLSAPHKSPSSSNETSV---QL--QRLNADVQL 578 (1472)
Q Consensus 508 ~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~l 578 (1472)
..+....+.-++...+.+|..|+............ +.. ...+...+. ..... .. .....+...
T Consensus 252 ~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--------~v~~~al~~l~nl~~~~~~~~ 323 (503)
T d1wa5b_ 252 AKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHEST--------LVQTPALRAVGNIVTGNDLQT 323 (503)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCH--------HHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCH--------HHHHHHHHHHHHHHHHHHHHH
T ss_conf 987235638999999999875322771111001122331110110257863--------644567777777877888878
Q ss_pred HHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE
Q ss_conf 999-9999999999822999996899999834300000138---656553212222213569875689999710241445
Q 000470 579 SQL-RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFG---QRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCF 654 (1472)
Q Consensus 579 ~~l-~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG---~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~ 654 (1472)
..+ ...+.+.+..|+.. .++.|+...+.-+..+|..-. ..-.+.-+++.|+..|+..++..|......|..++.
T Consensus 324 ~~~~~~~~l~~l~~ll~~--~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~nl~~ 401 (503)
T d1wa5b_ 324 QVVINAGVLPALRLLLSS--PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASS 401 (503)
T ss_dssp HHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 763123409999999639--978889999877888861469888999971465236776026873689999999999973
Q ss_pred EECCC--H----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH-------HHHH------HHHHHHCCCCCC
Q ss_conf 30431--1----457478889763179814889999999999998198825-------7899------999853222346
Q 000470 655 FVGER--S----VEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRK-------RILL------EMIERAFPLLCY 715 (1472)
Q Consensus 655 ~vG~~--s----~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k-------~~~~------~~~~~~~~ll~H 715 (1472)
..... . ++.-+++.|..-|...+.-++..+|.+|..+.+.|--.+ ..+. +.+...--|.-|
T Consensus 402 ~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~~~~~~~~~~~~~~~~~iee~g~~~~i~~Lq~~ 481 (503)
T d1wa5b_ 402 GGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQN 481 (503)
T ss_dssp HTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGC
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 65354899999998976999999865998899999999999999988877565302301899999988779999998769
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 869999999999999
Q 000470 716 PSQWVRRSVVTFIAA 730 (1472)
Q Consensus 716 Pn~wIR~~~~~~i~~ 730 (1472)
||..|++-|..++-.
T Consensus 482 ~~~~i~~~A~~il~~ 496 (503)
T d1wa5b_ 482 ENDKIYEKAYKIIET 496 (503)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 989999999999998
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.93 E-value=0.00041 Score=39.14 Aligned_cols=16 Identities=6% Similarity=0.144 Sum_probs=8.7
Q ss_pred EEEEEECCCCCEEEEE
Q ss_conf 3899996999899999
Q 000470 1212 VSSLVTGPCGNWFVSG 1227 (1472)
Q Consensus 1212 Itsi~~sp~g~~LvsG 1227 (1472)
...+.++|+|.+|+++
T Consensus 257 ~~~i~~spdG~~lyvs 272 (365)
T d1jofa_ 257 ADVCALTFSGKYMFAS 272 (365)
T ss_dssp EEEEEECTTSSEEEEE
T ss_pred CCCEEECCCCCEEEEE
T ss_conf 6316998999978997
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=1.3e-05 Score=48.95 Aligned_cols=183 Identities=19% Similarity=0.143 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 780239999999999703699200124223112102348860367899999997624461018998765421212235-7
Q 000470 430 KLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPML-S 508 (1472)
Q Consensus 430 ~~~~sk~~~l~ll~~~~~~~~de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l-~ 508 (1472)
..|..|..|++.|..+.. +..+|.++.++.|+++.||..|+++|.++-.... . .+.+++.| .
T Consensus 31 ~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~----~-----~~~~~~~l~~ 93 (276)
T d1oyza_ 31 HNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKK----C-----EDNVFNILNN 93 (276)
T ss_dssp SSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTT----T-----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCC--------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC----C-----CCCHHHHHHH
T ss_conf 999999999999986188--------7399999999809998999999999987202212----1-----2022999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999983146778830699999999999999975210344446899999999974200110257088999999999999
Q 000470 509 MLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEV 588 (1472)
Q Consensus 509 ~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~ 588 (1472)
.+..|++..||...+.+|+.+..... . . ...+.+.
T Consensus 94 ~~l~d~~~~vr~~a~~aL~~~~~~~~-----------------------------------~------~----~~~~~~~ 128 (276)
T d1oyza_ 94 MALNDKSACVRATAIESTAQRCKKNP-----------------------------------I------Y----SPKIVEQ 128 (276)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHHHCG-----------------------------------G------G----HHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCC-----------------------------------H------H----HHHHHHH
T ss_conf 98669976689999999998702462-----------------------------------1------0----1899999
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Q ss_conf 99982299999689999983430000013865655321222221356987568999971024144530431145747888
Q 000470 589 VQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 668 (1472)
Q Consensus 589 v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPl 668 (1472)
+..++. |.++.|+++....+.. .| +...++.++..+++.++..|......+..+. .. .....|.
T Consensus 129 l~~~~~--d~~~~vr~~a~~~l~~----~~----~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~ 192 (276)
T d1oyza_ 129 SQITAF--DKSTNVRRATAFAISV----IN----DKATIPLLINLLKDPNGDVRNWAAFAININK----YD--NSDIRDC 192 (276)
T ss_dssp HHHHTT--CSCHHHHHHHHHHHHT----C-------CCHHHHHHHHTCSSHHHHHHHHHHHHHHT----CC--CHHHHHH
T ss_pred HHHHHC--CCCHHHHHHHHHHHHH----CC----HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----CC--CCCCCHH
T ss_conf 999864--7204899999998741----02----3889999887404664011135777877651----02--1113316
Q ss_pred HHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 9763179814889999999999
Q 000470 669 IEQALSDATEAVIVNALDCLAI 690 (1472)
Q Consensus 669 l~q~L~D~eE~Vv~~~l~~l~~ 690 (1472)
+.+.+.|....|-..++.++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~al~~ 214 (276)
T d1oyza_ 193 FVEMLQDKNEEVRIEAIIGLSY 214 (276)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCH
T ss_conf 6664110000123332001000
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=0.00071 Score=37.56 Aligned_cols=215 Identities=11% Similarity=0.009 Sum_probs=107.6
Q ss_pred CCCEEEECCCCCCCEEEEEECCCCCEEEEEECC-CC--EEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEE
Q ss_conf 653634511234555589990799799999299-97--999939988644211110587416973279999249979999
Q 000470 1047 RGILVAHLQEHCSAVNEIAISHDHSFFVSASDD-ST--VKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1123 (1472)
Q Consensus 1047 ~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~D-Gt--VkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las 1123 (1472)
.|.-...+..+.+.+..-+|||||+.+|-.+.+ +. +.+.+..... ......+.+...+..|+|++..++.
T Consensus 27 dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~spdg~~i~~ 99 (269)
T d2hqsa1 27 DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-------VRQVASFPRHNGAPAFSPDGSKLAF 99 (269)
T ss_dssp TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-------EEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCCCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC-------EEEEEEEECCCCCCEECCCCCEEEE
T ss_conf 999767986589842603887899989999815267513443113675-------0677642024543024488986467
Q ss_pred EE-CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCC--EEEEEECCCCCCC
Q ss_conf 91-79949999801124688864334685452330279985899997137998721999995897--4999959989865
Q 000470 1124 GA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNC--GIHLWDTRSNSNT 1200 (1472)
Q Consensus 1124 ~s-~DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~dg--~I~iwDlrt~~~~ 1200 (1472)
.. .+|...++...... .................+..+. ...+++...+| .|...++......
T Consensus 100 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~i~~~~~~~~~~~ 164 (269)
T d2hqsa1 100 ALSKTGSLNLYVMDLAS-------------GQIRQVTDGRSNNTEPTWFPDS--QNLAFTSDQAGRPQVYKVNINGGAPQ 164 (269)
T ss_dssp EECTTSSCEEEEEETTT-------------CCEEECCCCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTSSCCE
T ss_pred EEECCCCCCEEECCCCC-------------CCCEEEEECCCCCCCCCCCCCC--CCCEECCCCCCCCEEEEEECCCCCCE
T ss_conf 64027864100002221-------------2200001014421145434554--43300001268743865421331000
Q ss_pred CEEECCCCCCCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 4000478766538999969998999993799-399997899951006741566772047842599997444689997999
Q 000470 1201 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG-VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1279 (1472)
Q Consensus 1201 ~~l~~~~h~g~Itsi~~sp~g~~LvsGssdG-~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~v 1279 (1472)
. +.. ..+......|+|++.+++..+.++ ...+|............. .........| +|++. +|+.
T Consensus 165 ~-~~~--~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~p~~-SPDG~---------~i~f 230 (269)
T d2hqsa1 165 R-ITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS-STFLDETPSL-APNGT---------MVIY 230 (269)
T ss_dssp E-CCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC-CSSSCEEEEE-CTTSS---------EEEE
T ss_pred E-EEC--CCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEE-CCCCCCCEEE-CCCCC---------EEEE
T ss_conf 1-000--1222234322345430577860588012567603564405850-6865445589-89999---------9999
Q ss_pred EEC---CCEEEEEECCCCEEE
Q ss_conf 986---994999986887177
Q 000470 1280 AAG---CNEVSLWNAENGSCH 1297 (1472)
Q Consensus 1280 as~---dg~V~VWDl~tg~~~ 1297 (1472)
.+. ...+.+|++..+...
T Consensus 231 ~s~~~~~~~l~~~~~dg~~~~ 251 (269)
T d2hqsa1 231 SSSQGMGSVLNLVSTDGRFKA 251 (269)
T ss_dssp EEEETTEEEEEEEETTSCCEE
T ss_pred EECCCCCCEEEEEECCCCCEE
T ss_conf 981799847999999999779
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=97.73 E-value=3.6e-05 Score=45.94 Aligned_cols=20 Identities=25% Similarity=0.165 Sum_probs=9.6
Q ss_pred CCCCCCCCCCCHHHHHHHHH
Q ss_conf 22221356987568999971
Q 000470 628 PILPAFLNDRDEQLRAVFYG 647 (1472)
Q Consensus 628 shliT~LNd~d~~LR~aff~ 647 (1472)
+.|+.+++|+||..|.+--+
T Consensus 189 ~~L~~l~~D~d~~VR~aaae 208 (233)
T d1lrva_ 189 DDLLELLHDPDWTVRLAAVE 208 (233)
T ss_dssp GGGGGGGGCSSHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHH
T ss_conf 99999873998899999997
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=97.73 E-value=2.3e-05 Score=47.21 Aligned_cols=163 Identities=20% Similarity=0.230 Sum_probs=83.4
Q ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31121023488603678999999976244610189987654212122357999999831467788306999999999999
Q 000470 459 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLV 538 (1472)
Q Consensus 459 lPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~ 538 (1472)
+.-|..|++|+.+.||..|.+.| | -+.|..|..|++..||.+.|..++.
T Consensus 68 ~~~L~~Ll~D~d~~VR~~AA~~L----------p-----------~~~L~~L~~D~d~~VR~~aa~~l~~---------- 116 (233)
T d1lrva_ 68 VEALTPLIRDSDEVVRRAVAYRL----------P-----------REQLSALMFDEDREVRITVADRLPL---------- 116 (233)
T ss_dssp GGGGGGGTTCSSHHHHHHHHTTS----------C-----------SGGGGGTTTCSCHHHHHHHHHHSCT----------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHC----------C-----------HHHHHHHHCCCCHHHHHHHHHCCCH----------
T ss_conf 99999882698989999999974----------8-----------9999998449974689988742688----------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCC
Q ss_conf 99975210344446899999999974200110257088999999999999999822999996899999834300000138
Q 000470 539 HSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFG 618 (1472)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG 618 (1472)
.. +..... + -++.--....+..-...+..|+. |.++.||++...++.
T Consensus 117 --~~------L~~Ll~------------D----~d~~VR~~aa~~~~~~~L~~L~~--D~d~~VR~~aA~~~~------- 163 (233)
T d1lrva_ 117 --EQ------LEQMAA------------D----RDYLVRAYVVQRIPPGRLFRFMR--DEDRQVRKLVAKRLP------- 163 (233)
T ss_dssp --GG------GGGGTT------------C----SSHHHHHHHHHHSCGGGGGGTTT--CSCHHHHHHHHHHSC-------
T ss_pred --HH------HHHHHC------------C----CCHHHHHHHHHCCCHHHHHHHHC--CCCHHHHHHHHHHCC-------
T ss_conf --99------999855------------9----98789999986110668998834--897899999998459-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 65655321222221356987568999971024144530431145747888976317981488999999999999819882
Q 000470 619 QRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 698 (1472)
Q Consensus 619 ~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~ 698 (1472)
-+.|+..++|.|+..|.+-.+.+. -|.|.+.+.|++..|-..|.+.+.
T Consensus 164 --------~~~L~~l~~D~d~~VR~~aa~~L~---------------~~~L~~l~~D~d~~VR~aaae~~~--------- 211 (233)
T d1lrva_ 164 --------EESLGLMTQDPEPEVRRIVASRLR---------------GDDLLELLHDPDWTVRLAAVEHAS--------- 211 (233)
T ss_dssp --------GGGGGGSTTCSSHHHHHHHHHHCC---------------GGGGGGGGGCSSHHHHHHHHHHSC---------
T ss_pred --------HHHHHHHCCCCCHHHHHHHHHHCC---------------CHHHHHHHHCCCHHHHHHHHHHCC---------
T ss_conf --------999998705998899999998458---------------499999873998899999997063---------
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 578999998532223468699999999
Q 000470 699 KRILLEMIERAFPLLCYPSQWVRRSVV 725 (1472)
Q Consensus 699 k~~~~~~~~~~~~ll~HPn~wIR~~~~ 725 (1472)
.+ .+..|-.|+.+||.+++
T Consensus 212 ----~~----ll~~L~D~d~~VR~aA~ 230 (233)
T d1lrva_ 212 ----LE----ALRELDEPDPEVRLAIA 230 (233)
T ss_dssp ----HH----HHHHCCCCCHHHHHHHH
T ss_pred ----HH----HHHHHCCCCHHHHHHHH
T ss_conf ----99----99986799999999999
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.71 E-value=0.00094 Score=36.75 Aligned_cols=203 Identities=11% Similarity=0.045 Sum_probs=99.4
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCC---CEEEEEEECCCCEEEEEECC---------
Q ss_conf 555899907997999992999799993998864421111058741697---32799992499799999179---------
Q 000470 1060 AVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS---RALCTMMLRHSAQVVVGACD--------- 1127 (1472)
Q Consensus 1060 ~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~---~I~~i~f~~~~~~las~s~D--------- 1127 (1472)
.-+.++|.+++..++.+...+.+...|......... .....+. ...++++.++++..++-...
T Consensus 72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~-----~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~ 146 (314)
T d1pjxa_ 72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIA-----KKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECC-----SBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEE-----ECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 530699907999899997798399994777479997-----334324545787278988899899914866754320110
Q ss_pred ----CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCC-C-EEEEEEECCCEEEEEECCCCCCCC
Q ss_conf ----9499998011246888643346854523302799858999971379987-2-199999589749999599898654
Q 000470 1128 ----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-S-HMFMYSTQNCGIHLWDTRSNSNTW 1201 (1472)
Q Consensus 1128 ----G~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s-~-~~Lv~at~dg~I~iwDlrt~~~~~ 1201 (1472)
..=.+|.++.. + ........ -..-+.++|+++... . .++++-+..+.|..+|+.....+.
T Consensus 147 ~~~~~~G~v~~~~~d----g---------~~~~~~~~-~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~ 212 (314)
T d1pjxa_ 147 SMQEKFGSIYCFTTD----G---------QMIQVDTA-FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE 212 (314)
T ss_dssp TTSSSCEEEEEECTT----S---------CEEEEEEE-ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE
T ss_pred EECCCCCEEEEEEEC----C---------CEEEEECC-CCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCC
T ss_conf 002688438999525----7---------40375078-532213699788776303799986024311776116765430
Q ss_pred E---E-E-CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCE
Q ss_conf 0---0-0-478766538999969998999993799399997899951006741566772047842599997444689997
Q 000470 1202 T---L-K-AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1276 (1472)
Q Consensus 1202 ~---l-~-~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~ 1276 (1472)
. + . .....+.+..++++.+|+..++....|.|..||...+..+..+..+. .....+++ .|+.. .
T Consensus 213 ~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~-~~~t~~af-g~d~~---------~ 281 (314)
T d1pjxa_ 213 NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-EKPSNLHF-KPQTK---------T 281 (314)
T ss_dssp EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS-SCEEEEEE-CTTSS---------E
T ss_pred EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-CCEEEEEE-ECCCC---------E
T ss_conf 1568997133566641025783478579998279999999699997999997999-98789999-28989---------9
Q ss_pred EEEE-ECCCEEEEEECC
Q ss_conf 9999-869949999868
Q 000470 1277 IYVA-AGCNEVSLWNAE 1292 (1472)
Q Consensus 1277 i~va-s~dg~V~VWDl~ 1292 (1472)
++++ +.++.|...++.
T Consensus 282 lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 282 IFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEETTTTEEEEEECS
T ss_pred EEEEECCCCCEEEEECC
T ss_conf 99998789919999789
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.56 E-value=0.0015 Score=35.43 Aligned_cols=210 Identities=8% Similarity=0.056 Sum_probs=113.4
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC--CCEEEEEC
Q ss_conf 4555589990799799999299979999399886442111105874169732799992499799999179--94999980
Q 000470 1058 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD--GIIHMFSV 1135 (1472)
Q Consensus 1058 ~~~V~~iafspd~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~D--G~I~iwdi 1135 (1472)
.-.+-.++|.++++++++-..+|.|.-|+....+ ..............+++.++++.+++...+ ....++.+
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~------~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~ 112 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE------IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 112 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC------EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CCCCEECEECCCCCEEEEECCCCEEEEEECCCCE------EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEE
T ss_conf 8674707899999999997799999999899995------9999948998703899999999999956897311049987
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEC-CCCCCEEEEEEECCCCCCCEEEEEEEC------CCEEEEEECCCCCCCCEEECCCC
Q ss_conf 11246888643346854523302-799858999971379987219999958------97499995998986540004787
Q 000470 1136 DHISRGLGNVEKYSGISDIKKKD-TKEGAIVTLVNYNTDNCASHMFMYSTQ------NCGIHLWDTRSNSNTWTLKAIPE 1208 (1472)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~s~~~Lv~at~------dg~I~iwDlrt~~~~~~l~~~~h 1208 (1472)
+... +. ...... ........-+.+.++ |.+.++... .+.+..++...... ..+.. .
T Consensus 113 ~~~~---~~--------~~~~~~~~~~~~~~nd~~~d~~---G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~~--~ 175 (319)
T d2dg1a1 113 TENG---DN--------LQDIIEDLSTAYCIDDMVFDSK---GGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQ--N 175 (319)
T ss_dssp CTTS---CS--------CEEEECSSSSCCCEEEEEECTT---SCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEE--E
T ss_pred CCCC---CE--------EEEECCCCCCCCCCCCEEEEEC---CCEEECCCCCCCCCCCCEEEEEECCCCEE-EEEEE--C
T ss_conf 3899---63--------6444267775558752267730---65320013540025742157884166335-78861--2
Q ss_pred CCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCC-CEEE------CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 6653899996999899-99937993999978999510-0674------15667720478425999974446899979999
Q 000470 1209 EGYVSSLVTGPCGNWF-VSGSSRGVLTLWDLRFLVPV-NSWQ------YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1280 (1472)
Q Consensus 1209 ~g~Itsi~~sp~g~~L-vsGssdG~I~lWDlR~~~~i-~s~~------~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~va 1280 (1472)
....+.++|+|++++| ++-+..+.|..||+...... .... .........+++ ..++++.++.
T Consensus 176 ~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~v----------D~~G~l~Va~ 245 (319)
T d2dg1a1 176 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI----------DSDDNLYVAM 245 (319)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE----------BTTCCEEEEE
T ss_pred CCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEECCCCCEEEECCCCCCCEEEEEE----------CCCCCEEEEE
T ss_conf 330100010122212787404689147999769983620246333312577641036417----------3899999998
Q ss_pred ECCCEEEEEECCCCEEEEEEE
Q ss_conf 869949999868871778986
Q 000470 1281 AGCNEVSLWNAENGSCHQVLR 1301 (1472)
Q Consensus 1281 s~dg~V~VWDl~tg~~~~~l~ 1301 (1472)
.+.+.|.+||- .|+....+.
T Consensus 246 ~~~g~V~~~~p-~G~~l~~i~ 265 (319)
T d2dg1a1 246 YGQGRVLVFNK-RGYPIGQIL 265 (319)
T ss_dssp ETTTEEEEECT-TSCEEEEEE
T ss_pred CCCCEEEEECC-CCCEEEEEE
T ss_conf 48998999979-995988996
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.50 E-value=0.00022 Score=40.84 Aligned_cols=274 Identities=12% Similarity=0.086 Sum_probs=134.2
Q ss_pred HHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 32688884310267--8023999999999970369920012422311210234886036789999999762446101899
Q 000470 417 LIASLLCSCVRNVK--LPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 494 (1472)
Q Consensus 417 i~ls~i~s~~R~~~--~~~sk~~~l~ll~~~~~~~~de~~LdrilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~ 494 (1472)
.+...+...+++.. .+-.|.+++.++-.+++....+. +..++|+++.++.|+...||..|..++..++.........
T Consensus 455 ~l~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~~~~-~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~ 533 (959)
T d1wa5c_ 455 FFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQ-LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSP 533 (959)
T ss_dssp HHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSC
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999736887509999999999987774126788-9999999998727996158999999999999866003320
Q ss_pred CCCCCCCCCCCCCCCCC-------CC--CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 87654212122357999-------99--9831---467788306999999999999999752103444468999999999
Q 000470 495 DAKIFPEYILPMLSMLP-------DD--PEES---VRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSS 562 (1472)
Q Consensus 495 ~~~iF~eYilP~l~~l~-------~d--~~~~---vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1472)
...+-.|++.|-+..+. .+ .... ++...-++|..+ ..+|-+..
T Consensus 534 ~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~i---i~~~~~~~---------------------- 588 (959)
T d1wa5c_ 534 AFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRV---LQTSEDSI---------------------- 588 (959)
T ss_dssp CBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHH---HHHHTTTT----------------------
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHH----------------------
T ss_conf 01032887775699999999999986122025678899999999999---99879888----------------------
Q ss_pred CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCC---CCCCCCCCCCCCCCH
Q ss_conf 74200110257088999999999999999822999996899999834300000138656553---212222213569875
Q 000470 563 NETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND---FLLPILPAFLNDRDE 639 (1472)
Q Consensus 563 ~~~~~~~~~~~~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd---~iLshliT~LNd~d~ 639 (1472)
. . ....+-..+...+..+..+ ..++.....+++-|..|..+.|.+.-.. .++|-+...++....
T Consensus 589 -------~--~---~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~~~~~ 655 (959)
T d1wa5c_ 589 -------Q--P---LFPQLLAQFIEIVTIMAKN-PSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQ 655 (959)
T ss_dssp -------G--G---GHHHHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred -------H--H---HHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf -------8--8---9999999999999998568-4236789999999999998428135999999999999999843316
Q ss_pred HHHHH---HHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHCCCC
Q ss_conf 68999---97102414453043114574788897631798148899999999999981---9882578999998532223
Q 000470 640 QLRAV---FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKS---GYLRKRILLEMIERAFPLL 713 (1472)
Q Consensus 640 ~LR~a---ff~~i~~v~~~vG~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~---gLl~k~~~~~~~~~~~~ll 713 (1472)
.+... ++..+...+..+.+.- -+++-|++...+.+..+. +..++..+..++.. .+.+-..++.++ .-++
T Consensus 656 ~~~~~~~~l~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~l 730 (959)
T d1wa5c_ 656 EFIPYVFQIIAFVVEQSATIPESI-KPLAQPLLAPNVWELKGN-IPAVTRLLKSFIKTDSSIFPDLVPVLGIF---QRLI 730 (959)
T ss_dssp TTHHHHHHHHHHHHHHCSSCCTTT-GGGHHHHTSGGGGCCTTT-HHHHHHHHHHHHHHHGGGCSCSHHHHHHH---HHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCHHHHCCHHHHHHHH---HHHH
T ss_conf 478999999999987477866889-999999863788877611-89999999999972878644628799999---9987
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 46869999999999999970489
Q 000470 714 CYPSQWVRRSVVTFIAASSESLG 736 (1472)
Q Consensus 714 ~HPn~wIR~~~~~~i~~~~~~l~ 736 (1472)
.++.. ++.+..++..+...++
T Consensus 731 ~~~~~--~~~~~~ll~~ii~~~~ 751 (959)
T d1wa5c_ 731 ASKAY--EVHGFDLLEHIMLLID 751 (959)
T ss_dssp TCTTT--HHHHHHHHHHHHHHSC
T ss_pred CCCCC--HHHHHHHHHHHHHHCC
T ss_conf 79830--6899999999999785
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0049 Score=32.10 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=19.0
Q ss_pred CEEEEEECCCCCEEEEEECCC----CEEEEECCCCCCCCEEE
Q ss_conf 538999969998999993799----39999789995100674
Q 000470 1211 YVSSLVTGPCGNWFVSGSSRG----VLTLWDLRFLVPVNSWQ 1248 (1472)
Q Consensus 1211 ~Itsi~~sp~g~~LvsGssdG----~I~lWDlR~~~~i~s~~ 1248 (1472)
.+..+.|.+++.+++....++ .+.++|...+.+...+.
T Consensus 256 y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~ 297 (465)
T d1xfda1 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (465)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 045668757993899997410030137997079992787789
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00036 Score=39.50 Aligned_cols=307 Identities=15% Similarity=0.098 Sum_probs=134.0
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 68888431026780239999999999703699200124----22311210234886036789999999762446101899
Q 000470 419 ASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQ----RVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 494 (1472)
Q Consensus 419 ls~i~s~~R~~~~~~sk~~~l~ll~~~~~~~~de~~Ld----rilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~ 494 (1472)
+..+...+++...+..+..|+..|..++. +++.+-. -.+|-++.++.++++.|+..|+++|..+...-. .
T Consensus 61 v~~l~~~L~~~~~~~~~~~a~~~L~~l~~--~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~----~ 134 (529)
T d1jdha_ 61 VSAIVRTMQNTNDVETARCTAGTLHNLSH--HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE----G 134 (529)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHTT--SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCT----T
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC----H
T ss_conf 99999998479999999999999999958--91669999987989999998579798999999999998651320----1
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 87654-21212235799999983146778830699999999999999975210344446899999999974200110257
Q 000470 495 DAKIF-PEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLN 573 (1472)
Q Consensus 495 ~~~iF-~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1472)
....| -.-.+|.|..+..+++.-++..-|.+|..|+....-.-.... ..|..... -.-....+
T Consensus 135 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~---~~~~~~~L-------------~~ll~~~~ 198 (529)
T d1jdha_ 135 AKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIIL---ASGGPQAL-------------VNIMRTYT 198 (529)
T ss_dssp HHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHH---HTTHHHHH-------------HHHHHHCC
T ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCCHHH-------------HHHHHHHH
T ss_conf 136787658814899988705768888889999887630047888887---60563689-------------99998610
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
Q ss_conf 08899999999999999982299999689999983430000013865655321222221356987568999971024144
Q 000470 574 ADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVC 653 (1472)
Q Consensus 574 ~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~ 653 (1472)
...++......+..|.. +...++.+.+. -.++.|..+|.+.+..++..-...+..++
T Consensus 199 ----~~~~~~~~~~~l~~ls~----~~~~~~~~~~~---------------g~~~~L~~ll~~~~~~~~~~a~~~l~~ls 255 (529)
T d1jdha_ 199 ----YEKLLWTTSRVLKVLSV----CSSNKPAIVEA---------------GGMQALGLHLTDPSQRLVQNCLWTLRNLS 255 (529)
T ss_dssp ----CHHHHHHHHHHHHHHTT----STTHHHHHHHT---------------THHHHHHTTTTSSCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHC----CCCCCCHHHHH---------------HHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf ----48999999998751101----33233045654---------------33346999862540155530156777504
Q ss_pred EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH--HHHHHHCCCCC--CCCHHHHHHHHHHHH
Q ss_conf 53043114574788897631798148899999999999981988257899--99985322234--686999999999999
Q 000470 654 FFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILL--EMIERAFPLLC--YPSQWVRRSVVTFIA 729 (1472)
Q Consensus 654 ~~vG~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~~~~--~~~~~~~~ll~--HPn~wIR~~~~~~i~ 729 (1472)
.--.......-++|.|.+-|.+..+-|...++.+|..|+.-.-=.+..+. +.+.....++. .++.=++..++..+.
T Consensus 256 ~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~ 335 (529)
T d1jdha_ 256 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALR 335 (529)
T ss_dssp TTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 32110256640101445412454288999999988750122037888888750078999999840011137889998850
Q ss_pred HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHH
Q ss_conf 9970489443259994224332024877657998998106999849999999
Q 000470 730 ASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQV 781 (1472)
Q Consensus 730 ~~~~~l~~ad~~c~l~P~l~p~l~~~~~~~~~~~~ll~~l~~Pisr~v~~~~ 781 (1472)
.++......+. .+..+........|+..+++|-.+.+-..+
T Consensus 336 ~l~~~~~~~~~-----------~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~ 376 (529)
T d1jdha_ 336 HLTSRHQEAEM-----------AQNAVRLHYGLPVVVKLLHPPSHWPLIKAT 376 (529)
T ss_dssp HHTSSSTTHHH-----------HHHHHHHTTCHHHHHHTTSTTCCHHHHHHH
T ss_pred CCCCHHHCCHH-----------HHHHHHHCCCCHHHHHHHHCCCHHHHHHHH
T ss_conf 02200000003-----------566677645612478987153127899999
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.94 E-value=0.0029 Score=33.55 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=16.5
Q ss_pred CEECCCCCCCEEECCCCCEEEEECCCC
Q ss_conf 842488899799915990999713664
Q 000470 64 ICHGDIKCENVLVTSWNWLYLSDFASF 90 (1472)
Q Consensus 64 IvH~DIKpeNILv~~~~~vkL~DFg~~ 90 (1472)
++|+|+.|.|||++.++..-|+||+.+
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a 211 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred EEEEECCCCCEEECCCCEEEEEECHHC
T ss_conf 898600476423649965999602314
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.92 E-value=0.00011 Score=42.74 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC
Q ss_conf 99968999998343000001386565532122222135698756899997102414453043114574788897631798
Q 000470 597 KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDA 676 (1472)
Q Consensus 597 ~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~L~D~ 676 (1472)
|.++.||++-+..+.. +|. + .++-|+..|+|.||..|..=...+..+ . ..-.+|.|++.|.|+
T Consensus 3 D~~~~VR~~A~~aL~~----~~~-~----~~~~L~~~l~d~~~~vR~~a~~~L~~~-------~-~~~~~~~L~~~l~d~ 65 (111)
T d1te4a_ 3 DENKWVRRDVSTALSR----MGD-E----AFEPLLESLSNEDWRIRGAAAWIIGNF-------Q-DERAVEPLIKLLEDD 65 (111)
T ss_dssp SSCCCSSSSCCSSTTS----CSS-T----THHHHHHGGGCSCHHHHHHHHHHHGGG-------C-SHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHH----HCH-H----HHHHHHHHHCCCCHHHHHHHHHHHHHC-------C-HHHHHHHHHHHHCCC
T ss_conf 9599999999999987----387-8----999999997499878999999998761-------0-123279987330230
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 1488999999999999819882578999998532223468699999999999
Q 000470 677 TEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 728 (1472)
Q Consensus 677 eE~Vv~~~l~~l~~l~~~gLl~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i 728 (1472)
++.|-..++.+|..+- ... .+.....++-+|+.++|++++.-+
T Consensus 66 ~~~VR~~a~~aL~~i~------~~~---~~~~L~~ll~d~~~~vr~~A~~aL 108 (111)
T d1te4a_ 66 SGFVRSGAARSLEQIG------GER---VRAAMEKLAETGTGFARKVAVNYL 108 (111)
T ss_dssp CTHHHHHHHHHHHHHC------SHH---HHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHC------CCC---HHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 3379999999999867------611---499999988299899999999998
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=96.88 E-value=0.005 Score=32.06 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=127.0
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12102348860367899999997624461018998765421212235799999983146778830699999999999999
Q 000470 461 HVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHS 540 (1472)
Q Consensus 461 yl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~ 540 (1472)
-|..+|+|+++.||..|+++|...= .+=.+|.|..++.|++..||..-+..|+.+..
T Consensus 23 ~L~~~L~d~~~~vR~~A~~~L~~~~--------------~~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~--------- 79 (276)
T d1oyza_ 23 ELFRLLDDHNSLKRISSARVLQLRG--------------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKI--------- 79 (276)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC---------
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC---------
T ss_conf 9998846999999999999998618--------------87399999999809998999999999987202---------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCC
Q ss_conf 97521034444689999999997420011025708899999999999999982299999689999983430000013865
Q 000470 541 IRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQR 620 (1472)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~v~~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ 620 (1472)
. . . ..+..+..+ ...++. |.++.||.+-+..+..+|. +..
T Consensus 80 --------------------~--~--~-----~~~~~~~~l-------~~~~l~--d~~~~vr~~a~~aL~~~~~--~~~ 119 (276)
T d1oyza_ 80 --------------------C--K--K-----CEDNVFNIL-------NNMALN--DKSACVRATAIESTAQRCK--KNP 119 (276)
T ss_dssp --------------------C--T--T-----THHHHHHHH-------HHHHHH--CSCHHHHHHHHHHHHHHHH--HCG
T ss_pred --------------------C--C--C-----CCCCHHHHH-------HHHHHC--CCCHHHHHHHHHHHHHHCC--CCC
T ss_conf --------------------2--1--2-----120229999-------999866--9976689999999998702--462
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 65532122222135698756899997102414453043114574788897631798148899999999999981988257
Q 000470 621 QSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKR 700 (1472)
Q Consensus 621 ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~L~D~eE~Vv~~~l~~l~~l~~~gLl~k~ 700 (1472)
.....+++.+..-++|.++..|.+-...+..+ . ....+|.+...+.+..+.|...+..++..+....
T Consensus 120 ~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~-------~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~----- 186 (276)
T d1oyza_ 120 IYSPKIVEQSQITAFDKSTNVRRATAFAISVI-------N-DKATIPLLINLLKDPNGDVRNWAAFAININKYDN----- 186 (276)
T ss_dssp GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCC-----
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-------C-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC-----
T ss_conf 10189999999986472048999999987410-------2-3889999887404664011135777877651021-----
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999998532223468699999999999999
Q 000470 701 ILLEMIERAFPLLCYPSQWVRRSVVTFIAAS 731 (1472)
Q Consensus 701 ~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~ 731 (1472)
..........+.+++.++|..++.-...+
T Consensus 187 --~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 215 (276)
T d1oyza_ 187 --SDIRDCFVEMLQDKNEEVRIEAIIGLSYR 215 (276)
T ss_dssp --HHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf --11331666641100001233320010000
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.63 E-value=0.012 Score=29.62 Aligned_cols=198 Identities=11% Similarity=0.038 Sum_probs=109.9
Q ss_pred CCCCCC-EEEECCCCCCCEEEEEECCCCCEEEEEECC--CCEEEE--ECCCCCCCCCCCCCEEEE--CCCCCEEEEEEEC
Q ss_conf 555653-634511234555589990799799999299--979999--399886442111105874--1697327999924
Q 000470 1044 WRPRGI-LVAHLQEHCSAVNEIAISHDHSFFVSASDD--STVKVW--DSRKLEKDISFRSRLTYH--LEGSRALCTMMLR 1116 (1472)
Q Consensus 1044 W~p~G~-lV~~L~~H~~~V~~iafspd~~~lvSgS~D--GtVkIW--D~~~~e~~~~~~s~~t~~--~~~~~I~~i~f~~ 1116 (1472)
|+|.|. ....+.+.....+.+++++||+++++...+ ....++ +....+. ..... ........+++.+
T Consensus 66 i~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~nd~~~d~ 139 (319)
T d2dg1a1 66 INPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL------QDIIEDLSTAYCIDDMVFDS 139 (319)
T ss_dssp ECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC------EEEECSSSSCCCEEEEEECT
T ss_pred EECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEE------EEECCCCCCCCCCCCEEEEE
T ss_conf 989999599999489987038999999999999568973110499873899636------44426777555875226773
Q ss_pred CCCEEEEEECC----CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCE-EEEEEECCCEEEE
Q ss_conf 99799999179----949999801124688864334685452330279985899997137998721-9999958974999
Q 000470 1117 HSAQVVVGACD----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASH-MFMYSTQNCGIHL 1191 (1472)
Q Consensus 1117 ~~~~las~s~D----G~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~-~Lv~at~dg~I~i 1191 (1472)
+++..++.... ..-.+|.++.. + ..+..... .-.....++|+++ ++ +.++-+..+.|..
T Consensus 140 ~G~l~vtd~~~~~~~~~g~v~~~~~d----g--------~~~~~~~~-~~~~pnGia~s~d---g~~lyvad~~~~~I~~ 203 (319)
T d2dg1a1 140 KGGFYFTDFRGYSTNPLGGVYYVSPD----F--------RTVTPIIQ-NISVANGIALSTD---EKVLWVTETTANRLHR 203 (319)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTT----S--------CCEEEEEE-EESSEEEEEECTT---SSEEEEEEGGGTEEEE
T ss_pred CCCEEECCCCCCCCCCCCEEEEEECC----C--------CEEEEEEE-CCCEEEEEEECCC---CCEEEEECCCCCCEEE
T ss_conf 06532001354002574215788416----6--------33578861-2330100010122---2127874046891479
Q ss_pred EECCCCCCC-CEE-----ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCC-----CCEEEEE
Q ss_conf 959989865-400-----04787665389999699989999937993999978999510067415667-----7204784
Q 000470 1192 WDTRSNSNT-WTL-----KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-----PIEKMCL 1260 (1472)
Q Consensus 1192 wDlrt~~~~-~~l-----~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~~~~i~s~~~~~~~-----~I~~l~~ 1260 (1472)
||+...... ... ......+.+..++++.+|+..++....|.|.+||. .+..+..+..+... .++++.+
T Consensus 204 ~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~ 282 (319)
T d2dg1a1 204 IALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQF 282 (319)
T ss_dssp EEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEE
T ss_pred EEECCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CCCEEEEEECCCCCCCCCCEEEEEEE
T ss_conf 99769983620246333312577641036417389999999848998999979-99598899688757786750466778
Q ss_pred ECCCC
Q ss_conf 25999
Q 000470 1261 FVPPP 1265 (1472)
Q Consensus 1261 ~~p~~ 1265 (1472)
.+..
T Consensus 283 -~~~~ 286 (319)
T d2dg1a1 283 -IPGT 286 (319)
T ss_dssp -CTTS
T ss_pred -ECCC
T ss_conf -0799
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.38 E-value=0.017 Score=28.59 Aligned_cols=90 Identities=8% Similarity=0.066 Sum_probs=37.1
Q ss_pred EEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC-----CE-EECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 9971379987219999958974999959989865-----40-00478766538999969998999993799399997899
Q 000470 1167 LVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT-----WT-LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF 1240 (1472)
Q Consensus 1167 ~~~~~~d~~s~~~Lv~at~dg~I~iwDlrt~~~~-----~~-l~~~~h~g~Itsi~~sp~g~~LvsGssdG~I~lWDlR~ 1240 (1472)
.+.|+++. ..++++-+..+.|..+++...... .. .......+.+..+++|.+|+..++....|.|..||. .
T Consensus 152 g~~~s~d~--~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~ 228 (295)
T d2ghsa1 152 SICFSPDG--TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 228 (295)
T ss_dssp EEEECTTS--CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred EEEECCCC--CEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECC-C
T ss_conf 02465877--66898515663246764535555324535788416755566632678699998953207884688569-9
Q ss_pred CCCCCEEECCCCCCCEEEEE
Q ss_conf 95100674156677204784
Q 000470 1241 LVPVNSWQYSQVCPIEKMCL 1260 (1472)
Q Consensus 1241 ~~~i~s~~~~~~~~I~~l~~ 1260 (1472)
+..+..+..+.. .+++++|
T Consensus 229 G~~~~~i~lP~~-~~T~~~F 247 (295)
T d2ghsa1 229 GNHIARYEVPGK-QTTCPAF 247 (295)
T ss_dssp CCEEEEEECSCS-BEEEEEE
T ss_pred CCEEEEECCCCC-CEEEEEE
T ss_conf 928668638998-5279898
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.16 E-value=0.022 Score=27.84 Aligned_cols=53 Identities=6% Similarity=-0.016 Sum_probs=31.4
Q ss_pred EECCC--CCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE
Q ss_conf 99079--97999992999799993998864421111058741697327999924997999991
Q 000470 1065 AISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1125 (1472)
Q Consensus 1065 afspd--~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s 1125 (1472)
..+|| |+.+|-.+. |-|-+.|+..++ .+ .+..+.+.+....|+|+|+.||-..
T Consensus 5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g~------~~-~Lt~~~~~~~~p~~SPDG~~iaf~~ 59 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCC-DDLWEHDLKSGS------TR-KIVSNLGVINNARFFPDGRKIAIRV 59 (281)
T ss_dssp CEEEEEETTEEEEEET-TEEEEEETTTCC------EE-EEECSSSEEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCEEEEEEC-CCEEEEECCCCC------EE-EEECCCCCCCCEEECCCCCEEEEEE
T ss_conf 2588879999999909-968999899998------79-9766998526779878999899998
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.014 Score=29.13 Aligned_cols=103 Identities=18% Similarity=0.149 Sum_probs=59.2
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC----CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 88843102678023999999999970369920012----42231121023488603678999999976244610189987
Q 000470 421 LLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRL----QRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDA 496 (1472)
Q Consensus 421 ~i~s~~R~~~~~~sk~~~l~ll~~~~~~~~de~~L----drilPyl~~ll~d~~~~Vr~~al~~l~~~L~~v~~~~~~~~ 496 (1472)
.+...+++-.....+..+..++..++.. ++++- .-.+|-++.++.+.+..++..|+.++..+-. ....
T Consensus 189 ~L~~ll~~~~~~~~~~~~~~~l~~ls~~--~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls~------~~~~ 260 (529)
T d1jdha_ 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVC--SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSD------AATK 260 (529)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHTTS--TTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHT------TCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC------CCCC
T ss_conf 8999998610489999999987511013--3233045654333469998625401555301567775043------2110
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 65421212235799999983146778830699999
Q 000470 497 KIFPEYILPMLSMLPDDPEESVRICYASNIAKLAL 531 (1472)
Q Consensus 497 ~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~ 531 (1472)
.+..+-++|.|..+..+++..|+..-+.+|..|+.
T Consensus 261 ~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~ 295 (529)
T d1jdha_ 261 QEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTC 295 (529)
T ss_dssp CSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 25664010144541245428899999998875012
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.024 Score=27.58 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=32.4
Q ss_pred CEEEEEEECCCCCCCEEEEEEEC-C---CEEEEEECCCCCCCCEEECCCCCCCE----EEEEECCCCCE
Q ss_conf 58999971379987219999958-9---74999959989865400047876653----89999699989
Q 000470 1163 AIVTLVNYNTDNCASHMFMYSTQ-N---CGIHLWDTRSNSNTWTLKAIPEEGYV----SSLVTGPCGNW 1223 (1472)
Q Consensus 1163 ~~v~~~~~~~d~~s~~~Lv~at~-d---g~I~iwDlrt~~~~~~l~~~~h~g~I----tsi~~sp~g~~ 1223 (1472)
..+..+.|.++ +.+++.... + ..|.++|..++++...+.. ...++| ....|.++|..
T Consensus 255 ~y~~~~~W~~d---~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e-~~~~wv~~~~~~p~~~~dg~~ 319 (465)
T d1xfda1 255 YYITMVKWATS---TKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSKDGRK 319 (465)
T ss_dssp EEEEEEEESSS---SEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECTTSCS
T ss_pred CEEEEEEECCC---CEEEEEEECCCCCCCEEEEECCCCCCEEEEEEE-CCCCEEECCCCCEEECCCCCE
T ss_conf 30456687579---938999974100301379970799927877897-278517356786057468980
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.87 E-value=0.03 Score=27.00 Aligned_cols=199 Identities=7% Similarity=0.028 Sum_probs=92.0
Q ss_pred CCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 6973279999249979999917-994999980112468886433468545233027998589999713799872199999
Q 000470 1105 EGSRALCTMMLRHSAQVVVGAC-DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS 1183 (1472)
Q Consensus 1105 ~~~~I~~i~f~~~~~~las~s~-DG~I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~a 1183 (1472)
+...+..-+|+|+|+.||-... ++...+|...... + ..+. ............|+|+ +..++..
T Consensus 37 ~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~----------~--~~~~-~~~~~~~~~~~~~spd---g~~i~~~ 100 (269)
T d2hqsa1 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN----------G--AVRQ-VASFPRHNGAPAFSPD---GSKLAFA 100 (269)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT----------C--CEEE-EECCSSCEEEEEECTT---SSEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCC----------C--CEEE-EEEEECCCCCCEECCC---CCEEEEE
T ss_conf 898426038878999899998152675134431136----------7--5067-7642024543024488---9864676
Q ss_pred -ECCCEEE--EEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEE-EECCCCEEEE--ECCCCCCCCEEECCCCCCCEE
Q ss_conf -5897499--995998986540004787665389999699989999-9379939999--789995100674156677204
Q 000470 1184 -TQNCGIH--LWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS-GSSRGVLTLW--DLRFLVPVNSWQYSQVCPIEK 1257 (1472)
Q Consensus 1184 -t~dg~I~--iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~Lvs-GssdG~I~lW--DlR~~~~i~s~~~~~~~~I~~ 1257 (1472)
...+... .+........... ..........+.+.+.++.. ...+|...+| ++...... ...........
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~--~~~~~~~~~~~ 175 (269)
T d2hqsa1 101 LSKTGSLNLYVMDLASGQIRQVT---DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ--RITWEGSQNQD 175 (269)
T ss_dssp ECTTSSCEEEEEETTTCCEEECC---CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE--ECCCSSSEEEE
T ss_pred EECCCCCCEEECCCCCCCCEEEE---ECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCE--EEECCCCCCCC
T ss_conf 40278641000022212200001---01442114543455443300001268743865421331000--10001222234
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEEC-CCE--EEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7842599997444689997999986-994--9999868871778986135889876687763235889889997533234
Q 000470 1258 MCLFVPPPNAAVSTTARPLIYVAAG-CNE--VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRN 1334 (1472)
Q Consensus 1258 l~~~~p~~~~~~~s~~~~~i~vas~-dg~--V~VWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 1334 (1472)
..+ +|++. .++.... .+. +.+.+...+.+. ...
T Consensus 176 ~~~-spdg~---------~~~~~~~~~~~~~i~~~~~~~~~~~-~~~--------------------------------- 211 (269)
T d2hqsa1 176 ADV-SSDGK---------FMVMVSSNGGQQHIAKQDLATGGVQ-VLS--------------------------------- 211 (269)
T ss_dssp EEE-CTTSS---------EEEEEEECSSCEEEEEEETTTCCEE-ECC---------------------------------
T ss_pred CCC-CCCCC---------EEEEEEECCCCEEEEEEECCCCCCE-EEE---------------------------------
T ss_conf 322-34543---------0577860588012567603564405-850---------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCC-CEE---ECCCCCEEEEEECCCCC
Q ss_conf 45332223448999886781583448999-189---81699909997399999
Q 000470 1335 VNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL---TGGTDLKIRRWDHCSPG 1383 (1472)
Q Consensus 1335 ~~~~~~~~~l~~~~~~~~~V~sl~~~p~g-~Li---Tgg~Dg~IriWDl~~~~ 1383 (1472)
.........|+|+| .|+ .-+....|++|+++...
T Consensus 212 ---------------~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~ 249 (269)
T d2hqsa1 212 ---------------STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 249 (269)
T ss_dssp ---------------CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred ---------------CCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCC
T ss_conf ---------------68654455898999999999817998479999999997
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=95.55 E-value=0.014 Score=29.13 Aligned_cols=10 Identities=10% Similarity=0.202 Sum_probs=4.8
Q ss_pred HHHHHHHCCC
Q ss_conf 9999998898
Q 000470 55 AVKQCHEKGI 64 (1472)
Q Consensus 55 aL~~lH~~gI 64 (1472)
.+++++..|+
T Consensus 57 ~l~~L~~~gv 66 (255)
T d1nd4a_ 57 RLSWLATTGV 66 (255)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHHHHCCC
T ss_conf 9999986599
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.47 E-value=0.042 Score=26.05 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=30.8
Q ss_pred CCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEE
Q ss_conf 9991898169990999739999996497189988999984067860586199995
Q 000470 1361 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQE 1415 (1472)
Q Consensus 1361 p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e 1415 (1472)
.+|.+++|..|++++.+|.++++..-...-+.. ..+...+|+ .+|.+++..
T Consensus 487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~-~~~~P~ty~---~~GkQYv~v 537 (573)
T d1kb0a2 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG-VVAAPSTYM---VDGRQYVSV 537 (573)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEE---ETTEEEEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCCC-CCCCCEEEE---ECCEEEEEE
T ss_conf 699899977999199999998868579989899-451677999---899999999
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.29 E-value=0.0034 Score=33.13 Aligned_cols=104 Identities=9% Similarity=0.125 Sum_probs=61.5
Q ss_pred HHHHCCCCHHCCCCCCCCC--CCCCCCCCCC----CCC-CCHHHHHHHHHCCCEEEEEECCCH---HHHHHHHHHHHHCC
Q ss_conf 9983430000013865655--3212222213----569-875689999710241445304311---45747888976317
Q 000470 605 ALLQDIGNLCSFFGQRQSN--DFLLPILPAF----LND-RDEQLRAVFYGQIVYVCFFVGERS---VEEYLLPYIEQALS 674 (1472)
Q Consensus 605 all~~i~~Lc~FFG~~ktn--d~iLshliT~----LNd-~d~~LR~aff~~i~~v~~~vG~~s---~e~~ilPll~q~L~ 674 (1472)
.+++-|..++..||..-.. +.+++.++.. .++ .+..++...|++|..+..++|+.. +++.++|++.+.+.
T Consensus 572 ~ll~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~ 651 (959)
T d1wa5c_ 572 FLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFS 651 (959)
T ss_dssp HHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999879888889999999999999998568423678999999999999842813599999999999999984
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9814889999999999998198825789999985
Q 000470 675 DATEAVIVNALDCLAILCKSGYLRKRILLEMIER 708 (1472)
Q Consensus 675 D~eE~Vv~~~l~~l~~l~~~gLl~k~~~~~~~~~ 708 (1472)
.........+++-+..+.+..---...+++++..
T Consensus 652 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 685 (959)
T d1wa5c_ 652 EDIQEFIPYVFQIIAFVVEQSATIPESIKPLAQP 685 (959)
T ss_dssp TTCTTTHHHHHHHHHHHHHHCSSCCTTTGGGHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 3316478999999999987477866889999999
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.05 E-value=0.056 Score=25.21 Aligned_cols=84 Identities=7% Similarity=-0.008 Sum_probs=45.8
Q ss_pred CCCC--CCCCEEEECCCCCCCEEEEEECCCCCEEEEEEC-CC-----CEEEEECCCCCCC-CCCCCCEEEECCCCCEEEE
Q ss_conf 8855--565363451123455558999079979999929-99-----7999939988644-2111105874169732799
Q 000470 1042 SGWR--PRGILVAHLQEHCSAVNEIAISHDHSFFVSASD-DS-----TVKVWDSRKLEKD-ISFRSRLTYHLEGSRALCT 1112 (1472)
Q Consensus 1042 ~~W~--p~G~lV~~L~~H~~~V~~iafspd~~~lvSgS~-DG-----tVkIWD~~~~e~~-~~~~s~~t~~~~~~~I~~i 1112 (1472)
.+|. ..|.....|..+.+.+...+|||||+.+|-.+. ++ .+.+.+...++.. .+. ...............
T Consensus 22 dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~-~~~~~~~~~~~~~~~ 100 (281)
T d1k32a2 22 DLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITY-FSGKSTGRRMFTDVA 100 (281)
T ss_dssp EEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCC-CCEEEETTEECSEEE
T ss_pred CEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEE-CCCCCCCCCCCCCCC
T ss_conf 6899989999879976699852677987899989999862898772289999825995288641-688754764443431
Q ss_pred EEECCCCEEEEEEC
Q ss_conf 99249979999917
Q 000470 1113 MMLRHSAQVVVGAC 1126 (1472)
Q Consensus 1113 ~f~~~~~~las~s~ 1126 (1472)
.|+|+++.++....
T Consensus 101 ~~spdg~~l~~~~~ 114 (281)
T d1k32a2 101 GFDPDGNLIISTDA 114 (281)
T ss_dssp EECTTCCEEEEECT
T ss_pred CCCCCCCEEEEEEC
T ss_conf 02798877999971
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.48 E-value=0.078 Score=24.29 Aligned_cols=51 Identities=18% Similarity=0.097 Sum_probs=29.6
Q ss_pred CCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEE
Q ss_conf 9991898169990999739999996497189988999984067860586199995
Q 000470 1361 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQE 1415 (1472)
Q Consensus 1361 p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e 1415 (1472)
.+|.+++|+.|+.+|-+|.++++..-...-+.. ..+....| ..+|.+++.-
T Consensus 496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~-~~~~P~ty---~~~G~qYv~i 546 (582)
T d1flga_ 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG-IVSPPITW---EQDGEQYLGV 546 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEE---EETTEEEEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCCC-CCCCCEEE---EECCEEEEEE
T ss_conf 698699967999699999999868679889999-62167799---9899999999
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.18 E-value=0.02 Score=28.08 Aligned_cols=81 Identities=21% Similarity=0.171 Sum_probs=49.3
Q ss_pred HHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 98229999968999998343000001386565532122222135698756899997102414453043114574788897
Q 000470 591 ELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIE 670 (1472)
Q Consensus 591 ~ll~~~~~~~~vk~all~~i~~Lc~FFG~~ktnd~iLshliT~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~ 670 (1472)
.++. |.++.||++-+.-+... |..+ .++.|+..|+|+||..|.+-.+++-.+ |. +-..|+|.
T Consensus 29 ~~l~--d~~~~vR~~a~~~L~~~----~~~~----~~~~L~~~l~d~~~~VR~~a~~aL~~i----~~----~~~~~~L~ 90 (111)
T d1te4a_ 29 ESLS--NEDWRIRGAAAWIIGNF----QDER----AVEPLIKLLEDDSGFVRSGAARSLEQI----GG----ERVRAAME 90 (111)
T ss_dssp HGGG--CSCHHHHHHHHHHHGGG----CSHH----HHHHHHHHHHHCCTHHHHHHHHHHHHH----CS----HHHHHHHH
T ss_pred HHHC--CCCHHHHHHHHHHHHHC----CHHH----HHHHHHHHHCCCHHHHHHHHHHHHHHH----CC----CCHHHHHH
T ss_conf 9974--99878999999998761----0123----279987330230337999999999986----76----11499999
Q ss_pred HHCCCCCHHHHHHHHHHHH
Q ss_conf 6317981488999999999
Q 000470 671 QALSDATEAVIVNALDCLA 689 (1472)
Q Consensus 671 q~L~D~eE~Vv~~~l~~l~ 689 (1472)
+.|.|+++.|...|+.+|.
T Consensus 91 ~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 91 KLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHTTSCCTHHHHHHHHHGG
T ss_pred HHHCCCCHHHHHHHHHHHH
T ss_conf 9882998999999999987
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=93.72 E-value=0.11 Score=23.32 Aligned_cols=64 Identities=11% Similarity=0.081 Sum_probs=40.1
Q ss_pred CCEEEEEECCCCCCCCEEECCCCCC-------CEEEEE-ECCCC---CEEEEEECCCCEEEEECCCCCCCCEEEC
Q ss_conf 9749999599898654000478766-------538999-96999---8999993799399997899951006741
Q 000470 1186 NCGIHLWDTRSNSNTWTLKAIPEEG-------YVSSLV-TGPCG---NWFVSGSSRGVLTLWDLRFLVPVNSWQY 1249 (1472)
Q Consensus 1186 dg~I~iwDlrt~~~~~~l~~~~h~g-------~Itsi~-~sp~g---~~LvsGssdG~I~lWDlR~~~~i~s~~~ 1249 (1472)
...|...|+++++..|.++...|.. .+..+. ...++ ..++.++.+|.+.++|.++++++.....
T Consensus 277 s~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~ 351 (596)
T d1w6sa_ 277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (596)
T ss_dssp SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEECCC
T ss_conf 443010263550010012403025657765421065310333355532100146543225406778825540144
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.25 E-value=0.047 Score=25.70 Aligned_cols=97 Identities=15% Similarity=0.089 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCC---CCCCCCCCCEEEECCC-CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 7802399999999997036992---0012422311210234-88603678999999976244610189987654-21212
Q 000470 430 KLPHYRRAAILLLKSSSLFIDD---EDRLQRVLPHVIAMLS-DPAAIVRCAALETLCDILPLVRNFPPSDAKIF-PEYIL 504 (1472)
Q Consensus 430 ~~~~sk~~~l~ll~~~~~~~~d---e~~LdrilPyl~~ll~-d~~~~Vr~~al~~l~~~L~~v~~~~~~~~~iF-~eYil 504 (1472)
..+.-|..|+..|-.++..-.. ...-.-++|.++.+++ +..+.||..|+.+|..+...... +...| ..-.+
T Consensus 71 ~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~----~~~~~~~~~gi 146 (264)
T d1xqra1 71 GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEA----GLLQFLRLDGF 146 (264)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHH
T ss_conf 99999999999999999888888899997276379999960499899999999999987424402----67899872012
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 23579999998314677883069999
Q 000470 505 PMLSMLPDDPEESVRICYASNIAKLA 530 (1472)
Q Consensus 505 P~l~~l~~d~~~~vr~~~A~~l~~LA 530 (1472)
|.|.++..+++.-++...+.+|..|+
T Consensus 147 ~~L~~lL~~~~~~~~~~a~~~L~~l~ 172 (264)
T d1xqra1 147 SVLMRAMQQQVQKLKVKSAFLLQNLL 172 (264)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 68899880586578899999999987
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=93.12 E-value=0.14 Score=22.70 Aligned_cols=51 Identities=14% Similarity=0.089 Sum_probs=30.5
Q ss_pred CCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEE
Q ss_conf 9991898169990999739999996497189988999984067860586199995
Q 000470 1361 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQE 1415 (1472)
Q Consensus 1361 p~g~LiTgg~Dg~IriWDl~~~~~s~vi~g~~~~~~~~~~~y~~~~~~~~~~~~e 1415 (1472)
.+|.+++|..|+.+|-+|..+++..-...-+.. ..+...+|+ .+|.+++..
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~-~~~~P~ty~---~dGkqyv~v 518 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSG-IVAAPMTFE---LAGRQYVAI 518 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEE---ETTEEEEEE
T ss_pred CCCEEEEECCCCCEEEEECCCCCEEEEEECCCC-CCCCCEEEE---ECCEEEEEE
T ss_conf 799899977898199999999858279989999-551677999---899999999
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.88 E-value=0.15 Score=22.49 Aligned_cols=201 Identities=9% Similarity=0.027 Sum_probs=92.7
Q ss_pred EEECC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 99907-99799999299979999399886442111105874169732799992499799999179949999801124688
Q 000470 1064 IAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGL 1142 (1472)
Q Consensus 1064 iafsp-d~~~lvSgS~DGtVkIWD~~~~e~~~~~~s~~t~~~~~~~I~~i~f~~~~~~las~s~DG~I~iwdi~~~~~~~ 1142 (1472)
..|++ ++.+..+--..+.|.-||..+++. ..+.. ...+.++++.+++..+++ +.+| +..++..+
T Consensus 23 p~wd~~~~~l~wvDi~~~~I~r~d~~~g~~-------~~~~~-~~~~~~i~~~~dg~l~va-~~~g-l~~~d~~t----- 87 (295)
T d2ghsa1 23 PTFDPASGTAWWFNILERELHELHLASGRK-------TVHAL-PFMGSALAKISDSKQLIA-SDDG-LFLRDTAT----- 87 (295)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEE-------EEEEC-SSCEEEEEEEETTEEEEE-ETTE-EEEEETTT-----
T ss_pred CEEECCCCEEEEEECCCCEEEEEECCCCEE-------EEEEC-CCCCEEEEEECCCCEEEE-EECC-CEEEECCC-----
T ss_conf 759899999999987899999998998959-------99989-998179899659988999-7376-38950464-----
Q ss_pred CCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEC----CCEEEEEECCCCCCCCEEECCCCCCCEEEEEEC
Q ss_conf 8643346854523302799858999971379987219999958----974999959989865400047876653899996
Q 000470 1143 GNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ----NCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1218 (1472)
Q Consensus 1143 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~s~~~Lv~at~----dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~s 1218 (1472)
+....+.. ................++ |.+.++... .+.-.+|.+..++...... .....+.++|+
T Consensus 88 g~~~~l~~-----~~~~~~~~~~nd~~vd~~---G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~---~~~~~Ng~~~s 156 (295)
T d2ghsa1 88 GVLTLHAE-----LESDLPGNRSNDGRMHPS---GALWIGTMGRKAETGAGSIYHVAKGKVTKLFA---DISIPNSICFS 156 (295)
T ss_dssp CCEEEEEC-----SSTTCTTEEEEEEEECTT---SCEEEEEEETTCCTTCEEEEEEETTEEEEEEE---EESSEEEEEEC
T ss_pred CEEEEEEE-----EECCCCCCCCEEEEECCC---CCEEEEECCCCCCCCCEEEEEECCCCEEEEEE---CCCCCCEEEEC
T ss_conf 51357866-----404787661013579799---99988742643133330576622996899865---06876402465
Q ss_pred CCCCEE-EEEECCCCEEEEECCCC--CCCC---EEEC-C-CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf 999899-99937993999978999--5100---6741-5-6677204784259999744468999799998699499998
Q 000470 1219 PCGNWF-VSGSSRGVLTLWDLRFL--VPVN---SWQY-S-QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1290 (1472)
Q Consensus 1219 p~g~~L-vsGssdG~I~lWDlR~~--~~i~---s~~~-~-~~~~I~~l~~~~p~~~~~~~s~~~~~i~vas~dg~V~VWD 1290 (1472)
+++..+ ++.+..+.|..+++... .... .+.. . .......+++ ..++++.++.-+.+.|..||
T Consensus 157 ~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~v----------D~~GnlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 157 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC----------DAEGHIWNARWGEGAVDRYD 226 (295)
T ss_dssp TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE----------CTTSCEEEEEETTTEEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEE----------CCCCCEEEEEECCCCEEEEC
T ss_conf 87766898515663246764535555324535788416755566632678----------69999895320788468856
Q ss_pred CCCCEEEEEEE
Q ss_conf 68871778986
Q 000470 1291 AENGSCHQVLR 1301 (1472)
Q Consensus 1291 l~tg~~~~~l~ 1301 (1472)
- +|+....+.
T Consensus 227 p-~G~~~~~i~ 236 (295)
T d2ghsa1 227 T-DGNHIARYE 236 (295)
T ss_dssp T-TCCEEEEEE
T ss_pred C-CCCEEEEEC
T ss_conf 9-992866863
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.68 E-value=0.16 Score=22.31 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=37.5
Q ss_pred CCEEEEEECCCCCCCCEEECCCCCC-------CEEEEEECCCC---CEEEEEECCCCEEEEECCCCCCCCEEEC
Q ss_conf 9749999599898654000478766-------53899996999---8999993799399997899951006741
Q 000470 1186 NCGIHLWDTRSNSNTWTLKAIPEEG-------YVSSLVTGPCG---NWFVSGSSRGVLTLWDLRFLVPVNSWQY 1249 (1472)
Q Consensus 1186 dg~I~iwDlrt~~~~~~l~~~~h~g-------~Itsi~~sp~g---~~LvsGssdG~I~lWDlR~~~~i~s~~~ 1249 (1472)
...+...|+++++..|.++...|.. ......+..++ ..++.++.+|.+.+.|..+++++..+..
T Consensus 271 s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~ 344 (571)
T d2ad6a1 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCEEEEECCCHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECC
T ss_conf 65325441255011001245676331465655641145511576654046326564499985689837655546
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.78 E-value=0.042 Score=25.99 Aligned_cols=22 Identities=23% Similarity=0.092 Sum_probs=11.2
Q ss_pred ECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 0234886036789999999762
Q 000470 464 AMLSDPAAIVRCAALETLCDIL 485 (1472)
Q Consensus 464 ~ll~d~~~~Vr~~al~~l~~~L 485 (1472)
.+++++++.||..|+..|..+.
T Consensus 66 ~ll~s~~~~vr~~A~~~L~~l~ 87 (264)
T d1xqra1 66 RYLEAGAAGLRWRAAQLIGTCS 87 (264)
T ss_dssp TTTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9837999999999999999999
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=91.48 E-value=0.082 Score=24.12 Aligned_cols=11 Identities=27% Similarity=-0.004 Sum_probs=5.2
Q ss_pred CCCHHHHHHHH
Q ss_conf 99999999999
Q 000470 39 FLSLVEKKWLA 49 (1472)
Q Consensus 39 ~l~~~~~~~i~ 49 (1472)
.|++..+..++
T Consensus 7 ~Lt~~~~~~la 17 (392)
T d2pula1 7 TLNESSAVALA 17 (392)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
T ss_conf 69989999999
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.72 E-value=0.049 Score=25.59 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=11.7
Q ss_pred CCCHHHHHHHHHHHHHHC
Q ss_conf 520478887999999827
Q 000470 139 PSMDIFAVGCVIAELFLE 156 (1472)
Q Consensus 139 ~~~DIwSlG~vl~el~tg 156 (1472)
.....+++|..+..+...
T Consensus 110 ~~~~~~~~g~~~~~~~~~ 127 (316)
T d2ppqa1 110 EAKHCREVGKALAAMHLA 127 (316)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 046788888998764544
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=86.52 E-value=0.38 Score=19.80 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=10.6
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 2047888799999982
Q 000470 140 SMDIFAVGCVIAELFL 155 (1472)
Q Consensus 140 ~~DIwSlG~vl~el~t 155 (1472)
......+|-.++.|..
T Consensus 116 ~~~~~~lG~~LA~lH~ 131 (325)
T d1zyla1 116 IDQMEAVGRYLGRMHQ 131 (325)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999998999999886
|