Citrus Sinensis ID: 000498
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M3G7 | 3856 | Serine/threonine-protein | yes | no | 0.988 | 0.374 | 0.689 | 0.0 | |
| Q62388 | 3066 | Serine-protein kinase ATM | yes | no | 0.867 | 0.413 | 0.331 | 0.0 | |
| Q13315 | 3056 | Serine-protein kinase ATM | yes | no | 0.862 | 0.411 | 0.328 | 0.0 | |
| Q6PQD5 | 3057 | Serine-protein kinase ATM | yes | no | 0.858 | 0.409 | 0.327 | 0.0 | |
| Q4WVM7 | 2796 | Serine/threonine-protein | yes | no | 0.474 | 0.247 | 0.358 | 1e-122 | |
| Q4IB89 | 2813 | Serine/threonine-protein | yes | no | 0.7 | 0.363 | 0.291 | 1e-120 | |
| Q2U639 | 2925 | Serine/threonine-protein | yes | no | 0.448 | 0.223 | 0.358 | 1e-116 | |
| Q5BHE2 | 2793 | Serine/threonine-protein | yes | no | 0.478 | 0.250 | 0.340 | 1e-113 | |
| O74630 | 2812 | Serine/threonine-protein | yes | no | 0.451 | 0.234 | 0.333 | 1e-113 | |
| Q7RZT9 | 2939 | Serine/threonine-protein | N/A | no | 0.481 | 0.239 | 0.331 | 1e-113 |
| >sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1 | Back alignment and function desciption |
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Score = 2084 bits (5400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1010/1464 (68%), Positives = 1206/1464 (82%), Gaps = 21/1464 (1%)
Query: 7 WHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACR 66
W SD +IV+AVWTLV + SD+A S+R VSDF+SR+GI DPH VVFHLP + + MH +
Sbjct: 2404 WQSDDEIVNAVWTLVRVSASDEADSMRLLVSDFLSRIGIRDPHTVVFHLPGNLVSMHGLQ 2463
Query: 67 PINHGSGSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKG 126
H +GS + + GIS+E LI +L LKKYL+DDSV+I+D+TSQTLRGILSTE+G
Sbjct: 2464 GFGHNTGS--KVRSLTENGISDETLITLLNFLKKYLLDDSVKIIDVTSQTLRGILSTERG 2521
Query: 127 QRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKFKANGISPEKSTVWETDGKTFET 186
Q+A+ SFDS ER+L+EVH +GVN+++VE LLD +++FKA S E VW TD K F+
Sbjct: 2522 QQALSSFDSCERALIEVHGRGVNLDIVEKILLDSQKQFKAEKFSLETPEVWSTDNKNFDR 2581
Query: 187 WICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQ 246
WIC L Y +I C DV +RLCQ+I LLK+E++ELL PSVVV+LAG +D++L LI+SQ
Sbjct: 2582 WICQLVYCMIALCEDVPIRLCQNIALLKAEISELLFPSVVVSLAGRIGMDINLHDLITSQ 2641
Query: 247 VQKYIFTESNKLIKSIQVFLNALNELRLCHVMERSS-SVPPKRESSKYVKHSGSSAKPRS 305
V+++IFT+SNKL KS QV LN LNELR+C+V+ERS S KRE K+S S S
Sbjct: 2642 VKEHIFTDSNKLTKSKQVMLNTLNELRMCYVLERSIFSGQTKRE-----KNSRSC----S 2692
Query: 306 TSAKARDVVATSN---ATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEH 362
T+AK RDV + SN A++TT+W+KVYWLS+DYL VA SAV+CG+Y T+ MYVE+WCEE
Sbjct: 2693 TAAKIRDVESGSNGMAASITTNWEKVYWLSIDYLVVAGSAVVCGAYLTASMYVEYWCEEK 2752
Query: 363 YKSLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHKLSSQIVTLEHEGNWS 422
+ +L+LG PDFS+ + LP H+EILVSA+T+INEPDSLYG+I S+KLS+QI+T EHEGNW+
Sbjct: 2753 FGNLSLGDPDFSYHDKLPDHVEILVSAITRINEPDSLYGVIHSNKLSAQIITFEHEGNWT 2812
Query: 423 KALEYYELQVRSDVMLQMDGNSGALSPHGL-PSVHLSPSTSENEMMQRKPYKGLMRSLQQ 481
+ALEYY+LQ RS M+ S L P+ S +QR+P+KGL+RSLQQ
Sbjct: 2813 RALEYYDLQARSQKMVVPSSLSENLEVEQFQPTTSARHSVFGEGEVQRQPFKGLIRSLQQ 2872
Query: 482 VGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSGQNIKS 541
GCMHVLD+YC+GLTS +G FQ+DPEF +LQYEAAWR G WDFSL Y + Q+ K+
Sbjct: 2873 TGCMHVLDLYCRGLTSREGCFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHCQPLQHAKN 2932
Query: 542 GHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCH 601
++HE+LH CL AL+EGD + FY KLK +K+ELVLS++ ASEESTE+IYS +VKLQIL H
Sbjct: 2933 NNYHESLHCCLRALQEGDYDGFYGKLKDTKKELVLSISRASEESTEFIYSTVVKLQILHH 2992
Query: 602 LGVAWDIRWK-SSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLE 660
LG+ WD+RW SS +S++ Y KQ +PVIPT+ QLSWLN +W+SI+ +TQLHM LLE
Sbjct: 2993 LGLVWDLRWTTSSHQSVHGYLVKQMACVDPVIPTMDQLSWLNKDWNSIITQTQLHMTLLE 3052
Query: 661 PFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTV 720
PF+AFRRVLLQIL C+ TMQHLL+SAS LRKG R S AAA+LHE KFL Q
Sbjct: 3053 PFIAFRRVLLQILGCEKCTMQHLLQSASLLRKGTRFSHAAASLHEFKFLCARSNGQQPVP 3112
Query: 721 YWLGRLEEAKLLRAQGQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRII 780
WLG+LEEAKLL AQG+HE++I+LA YI NY+ EEA D+YR++GKWLAE+RSSNSR I
Sbjct: 3113 DWLGKLEEAKLLHAQGRHEVSISLANYILHNYQLKEEASDIYRVIGKWLAETRSSNSRTI 3172
Query: 781 LENYLKPAVSFSEDQRT-TDKKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRL 839
LE YL+PAVS +E+Q + K+ ++RQ QT FHLAHYADALFKSYEERL+S+EWQAA+RL
Sbjct: 3173 LEKYLRPAVSLAEEQSSKICKRLVDRQSQTWFHLAHYADALFKSYEERLSSSEWQAALRL 3232
Query: 840 RKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALE 899
RKHKT ELE IKR KSS K E++DYS+KIQ+LQKQL MD+EEA+KL DRDNFL LALE
Sbjct: 3233 RKHKTKELEVFIKRFKSSKKAEQSDYSLKIQDLQKQLTMDKEEAEKLQVDRDNFLKLALE 3292
Query: 900 GYKRCLVIGDKYDV---FRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASRM 956
GYKRCL IGDKYDV FR VS+WFSL+S++NVI NM+ TI EVQSYKFIPLVYQIASR+
Sbjct: 3293 GYKRCLEIGDKYDVRVVFRQVSMWFSLASQKNVIDNMLSTIKEVQSYKFIPLVYQIASRL 3352
Query: 957 GSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDK 1016
GS+KD G ++FQ ALVSL++KMAIDHPYHTI QLLALANGDRIKD QRSRNSFVVDMDK
Sbjct: 3353 GSSKDESGSNSFQSALVSLIRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDMDK 3412
Query: 1017 KLAAENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREDTNKRIQLPREIRCLRQLEL 1076
KLAAE+LL+++S YHG +IRQMKQ+VD+YIKLAELETRREDTN+++ LPREIR ++QLEL
Sbjct: 3413 KLAAEHLLQDVSHYHGPMIRQMKQLVDIYIKLAELETRREDTNRKVALPREIRSVKQLEL 3472
Query: 1077 VPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSG 1136
VPVVTAT+P+D +CQYNEGSFP+F+GL++SV VMNGINAPKVVECFGSDG KY+QLAKSG
Sbjct: 3473 VPVVTATIPVDRSCQYNEGSFPFFRGLSDSVTVMNGINAPKVVECFGSDGQKYKQLAKSG 3532
Query: 1137 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1196
NDDLRQDAVMEQFFGLVNTFL N+RDTWKRRL VRTYKV+PFTPSAG+LEWVDGT+PLGD
Sbjct: 3533 NDDLRQDAVMEQFFGLVNTFLHNNRDTWKRRLAVRTYKVIPFTPSAGVLEWVDGTIPLGD 3592
Query: 1197 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1256
YLIGS+R+ GAHGRYGIG+W + KCREHMS+ KDKR AF +VC NFRPV+HYFFLE+FLQ
Sbjct: 3593 YLIGSSRSEGAHGRYGIGNWKYPKCREHMSSAKDKRKAFVDVCTNFRPVMHYFFLEKFLQ 3652
Query: 1257 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLK 1316
PA WF KRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLK
Sbjct: 3653 PADWFVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLK 3712
Query: 1317 TPERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWA 1376
TPERVPFRLTRDIIDGMG+TGVEGVFRRCCE+TLSVMRTNKEALLTIVEVFIHDPLYKWA
Sbjct: 3713 TPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWA 3772
Query: 1377 LSPLKALQRQKEMDDDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQV 1436
LSPLKALQRQKE +D LEG ++E+EGNKDA RAL+RVKQKLDGYEGGEMRS+HGQ
Sbjct: 3773 LSPLKALQRQKETEDYDGMNLEGLQEEFEGNKDATRALMRVKQKLDGYEGGEMRSIHGQA 3832
Query: 1437 QQLIQDAIDPERFCLMFPGWGAWL 1460
QQLIQDAID +R MFPGWGAW+
Sbjct: 3833 QQLIQDAIDTDRLSHMFPGWGAWM 3856
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Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR) or DNA replication stalling. Plays a central role in the perception and response to both stress-induced damage in somatic cells and developmentally programmed DNA damage during meiosis. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates histone variant H2AX to form H2AXS139ph at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Involved in transcriptional regulation of RAD51, PARP1, GR1, and LIG4 in response to DNA double strand breaks. Plays a dual role by activating the DNA damage response at dysfunctional telomeres and yet preventing this activation at functional telomeres. Not required for telomere length homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q62388|ATM_MOUSE Serine-protein kinase ATM OS=Mus musculus GN=Atm PE=1 SV=2 | Back alignment and function description |
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| >sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3 | Back alignment and function description |
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| >sp|Q6PQD5|ATM_PIG Serine-protein kinase ATM OS=Sus scrofa GN=ATM PE=3 SV=2 | Back alignment and function description |
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| >sp|Q4WVM7|ATM_ASPFU Serine/threonine-protein kinase tel1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tel1 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TEL1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q2U639|ATM_ASPOR Serine/threonine-protein kinase tel1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tel1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q5BHE2|ATM_EMENI Serine/threonine-protein kinase tel1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tel1 PE=3 SV=1 | Back alignment and function description |
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| >sp|O74630|ATM_SCHPO Serine/threonine-protein kinase tel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tel1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q7RZT9|ATM_NEUCR Serine/threonine-protein kinase tel-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tel-1 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | ||||||
| 359491245 | 2956 | PREDICTED: serine/threonine-protein kina | 0.983 | 0.485 | 0.784 | 0.0 | |
| 297733786 | 3085 | unnamed protein product [Vitis vinifera] | 0.983 | 0.465 | 0.762 | 0.0 | |
| 255540663 | 2954 | ataxia telangiectasia mutated, putative | 0.985 | 0.487 | 0.761 | 0.0 | |
| 356507238 | 3439 | PREDICTED: serine/threonine-protein kina | 0.984 | 0.417 | 0.747 | 0.0 | |
| 449441017 | 2985 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 0.986 | 0.482 | 0.732 | 0.0 | |
| 56748564 | 3856 | RecName: Full=Serine/threonine-protein k | 0.988 | 0.374 | 0.689 | 0.0 | |
| 7529272 | 3856 | ataxia-telangiectasia mutated protein (A | 0.988 | 0.374 | 0.689 | 0.0 | |
| 240255538 | 3845 | serine/threonine-protein kinase [Arabido | 0.980 | 0.372 | 0.685 | 0.0 | |
| 297815998 | 3832 | hypothetical protein ARALYDRAFT_323420 [ | 0.980 | 0.373 | 0.678 | 0.0 | |
| 222617585 | 2743 | hypothetical protein OsJ_00056 [Oryza sa | 0.961 | 0.511 | 0.610 | 0.0 |
| >gi|359491245|ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2337 bits (6056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1146/1461 (78%), Positives = 1271/1461 (86%), Gaps = 25/1461 (1%)
Query: 7 WHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACR 66
W +D DIVHAVW LVHMC SDDA+S+RA VSDFISRVGIGDPHCVVFHLP D +H CR
Sbjct: 1514 WRADQDIVHAVWNLVHMCGSDDANSVRALVSDFISRVGIGDPHCVVFHLPGDYSQIHVCR 1573
Query: 67 PINHGSGSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKG 126
PI+H SG+ E +F LD ISEELL+A++++LKKYLMDDSV+I+D+TSQTL GILSTE+G
Sbjct: 1574 PIHHDSGA--EISFPLDTSISEELLLALMRLLKKYLMDDSVKIIDLTSQTLWGILSTERG 1631
Query: 127 QRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKFKANGISPEKSTVWETDGKTFET 186
Q+A++SFDSYERSL+EVHSKGVNVELVE L DLE+KF A I EKST+W+T KTFE
Sbjct: 1632 QKALLSFDSYERSLIEVHSKGVNVELVEKLLSDLEKKFNAEAIPLEKSTIWKTHEKTFEM 1691
Query: 187 WICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQ 246
WICPL +SLIG CND +LRLCQDIVLLK+EVAELLLP+V+VNLAG K++ VDL KLISSQ
Sbjct: 1692 WICPLVHSLIGFCNDTILRLCQDIVLLKAEVAELLLPNVIVNLAGRKDLAVDLCKLISSQ 1751
Query: 247 VQKYIFTESNKLIKSIQVFLNALNELRLCHVMER--SSSVPPKRESSKYVKHSGSSAKPR 304
VQ+ IF ESN+ IKSIQV L+ALNELRL +VMER SSS+P KRE+S+ + SS
Sbjct: 1752 VQENIFVESNRSIKSIQVMLDALNELRLFYVMERTTSSSIPLKRETSRVNSSTMSSVALV 1811
Query: 305 STSAKARDVVATSNATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHYK 364
STS W+KVYWLS+DYL VAKSA+ICGSYFTSVMYVEHWCEEH+
Sbjct: 1812 STSL----------------WEKVYWLSIDYLDVAKSAIICGSYFTSVMYVEHWCEEHFN 1855
Query: 365 SLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHKLSSQIVTLEHEGNWSKA 424
SLTLG PDFSH E LP HIEILVSA+TQINEPDSLYGIIQ HKL+SQI+T EHEGNWSKA
Sbjct: 1856 SLTLGKPDFSHCEMLPHHIEILVSAITQINEPDSLYGIIQLHKLTSQIITFEHEGNWSKA 1915
Query: 425 LEYYELQVRSDVMLQMDGNSGALSP-HGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVG 483
LEYY+LQVRS+ + MDG+S LSP H +VH S S SE+ + QR+PYKGL+RSLQ++G
Sbjct: 1916 LEYYDLQVRSEPVAGMDGSSRNLSPEHSQLTVHPSFSKSEDVIRQREPYKGLIRSLQKIG 1975
Query: 484 CMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSG-QNIKSG 542
C HVLD+YC+GLTS GQFQHD EFT+LQYEAAWR GNWDFSL Y+GAN PS Q+I+
Sbjct: 1976 CTHVLDLYCQGLTSQNGQFQHDLEFTELQYEAAWRAGNWDFSLLYMGANSPSSSQHIRCD 2035
Query: 543 HFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHL 602
HF+ENLHSCL A +EGD EF+ KLK SKQELVLSV AS +STEYIYS I+KLQI HL
Sbjct: 2036 HFNENLHSCLRAFQEGDFNEFHSKLKDSKQELVLSVCHASGQSTEYIYSTIIKLQIFYHL 2095
Query: 603 GVAWDIRWKSSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLEPF 662
G+AW +RW E I P QK+ SEP+IPT+ QLSWLNT+WSSILKRTQLHMNLLEPF
Sbjct: 2096 GMAWGLRWAPPSEKIETSPGMQKVFSEPIIPTMDQLSWLNTDWSSILKRTQLHMNLLEPF 2155
Query: 663 MAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTVYW 722
+AFRRVLLQILS KD +QHLL+S+STLRKG R SQAAAALHE KFL G+Q S YW
Sbjct: 2156 IAFRRVLLQILSSKDCMVQHLLQSSSTLRKGSRFSQAAAALHEFKFLCNRMGEQHSASYW 2215
Query: 723 LGRLEEAKLLRAQGQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRIILE 782
LGRLEEAKLLRAQGQHEMAINLAKYIS+N + NEEA +VYRLVGKWLAE+RSSNSR ILE
Sbjct: 2216 LGRLEEAKLLRAQGQHEMAINLAKYISQNSQLNEEASNVYRLVGKWLAETRSSNSRTILE 2275
Query: 783 NYLKPAVSFSEDQRTTDKKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKH 842
YLK AV ++D + TDKK+IERQ QTHFHLAHYADALF+S+EERLASNEWQAA RLRKH
Sbjct: 2276 KYLKRAVLLAKDNKNTDKKTIERQSQTHFHLAHYADALFRSHEERLASNEWQAATRLRKH 2335
Query: 843 KTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALEGYK 902
KTIELEALIKRL+SS+KGEKTDYS+KIQELQKQLAMD EEA+KL DDRDNFL L LEGYK
Sbjct: 2336 KTIELEALIKRLRSSSKGEKTDYSVKIQELQKQLAMDAEEAEKLQDDRDNFLSLTLEGYK 2395
Query: 903 RCLVIGDKYDV---FRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGST 959
RCLV+GDKYDV FRLVSLWFSLSSRQNVI M+ T+ EVQSYKFIPLVYQIASRMGS+
Sbjct: 2396 RCLVLGDKYDVRVVFRLVSLWFSLSSRQNVINMMLSTVQEVQSYKFIPLVYQIASRMGSS 2455
Query: 960 KDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA 1019
KD LG H+FQFALVSLVKKM+IDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA
Sbjct: 2456 KDGLGPHSFQFALVSLVKKMSIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA 2515
Query: 1020 AENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREDTNKRIQLPREIRCLRQLELVPV 1079
AENLL+ELSS HG+II+QMKQMV++YIKLAELET+REDTNKR+ LPREIR LRQLELVPV
Sbjct: 2516 AENLLKELSSCHGSIIQQMKQMVEIYIKLAELETKREDTNKRVMLPREIRSLRQLELVPV 2575
Query: 1080 VTATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDD 1139
VT+T P+D CQY+EGSFP+FKGL +SVM+MNGINAPKVVEC GSDG KYRQLAKSGNDD
Sbjct: 2576 VTSTFPVDRNCQYHEGSFPHFKGLGDSVMIMNGINAPKVVECLGSDGQKYRQLAKSGNDD 2635
Query: 1140 LRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLI 1199
LRQDAVMEQFF LVNTFL NHRDTWKRRL VRTYKVVPFTPSAG+LEWV+GT+PLG+YLI
Sbjct: 2636 LRQDAVMEQFFSLVNTFLENHRDTWKRRLRVRTYKVVPFTPSAGVLEWVNGTLPLGEYLI 2695
Query: 1200 GSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAY 1259
GSTRNGGAHGRYG+ DWSF KCREHM+N KDKR AFQEVC+NFRPV+H FFLERFLQPA
Sbjct: 2696 GSTRNGGAHGRYGMEDWSFSKCREHMTNEKDKRKAFQEVCKNFRPVMHNFFLERFLQPAD 2755
Query: 1260 WFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPE 1319
WFEKRLAYTRSVAASSMVGYIVGLGDRH+MNILIDQATAEVVHIDLGVAFEQGLMLKTPE
Sbjct: 2756 WFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLMLKTPE 2815
Query: 1320 RVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSP 1379
RVPFRLTRDIIDGMGVTGVEGVFRRCCE+TLSVMRTNKEALLTIVEVFIHDPLYKWALSP
Sbjct: 2816 RVPFRLTRDIIDGMGVTGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALSP 2875
Query: 1380 LKALQRQKEMDDDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQL 1439
LKALQRQKE DDDLET LE E+EYEGNKDA RAL+RVKQKLDGYE GEMRSVHGQV+QL
Sbjct: 2876 LKALQRQKETDDDLETSLEDLEEEYEGNKDAARALLRVKQKLDGYEEGEMRSVHGQVRQL 2935
Query: 1440 IQDAIDPERFCLMFPGWGAWL 1460
IQDAIDP+RFC MFPGWGAWL
Sbjct: 2936 IQDAIDPDRFCRMFPGWGAWL 2956
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733786|emb|CBI15033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255540663|ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis] gi|223550511|gb|EEF51998.1| ataxia telangiectasia mutated, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356507238|ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449441017|ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|56748564|sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName: Full=Ataxia telangiectasia mutated homolog; Short=AtATM gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|7529272|emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|240255538|ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis thaliana] gi|332644858|gb|AEE78379.1| serine/threonine-protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297815998|ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|222617585|gb|EEE53717.1| hypothetical protein OsJ_00056 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | ||||||
| ZFIN|ZDB-GENE-040809-1 | 2773 | atm "ataxia telangiectasia mut | 0.648 | 0.341 | 0.370 | 4.8e-174 | |
| MGI|MGI:107202 | 3066 | Atm "ataxia telangiectasia mut | 0.653 | 0.311 | 0.370 | 1.3e-172 | |
| UNIPROTKB|Q5MPF8 | 3061 | atm "Ataxia telangiectasia mut | 0.649 | 0.309 | 0.375 | 1.4e-171 | |
| UNIPROTKB|Q13315 | 3056 | ATM "Serine-protein kinase ATM | 0.650 | 0.310 | 0.372 | 1.3e-169 | |
| UNIPROTKB|E1BEI6 | 3057 | ATM "Uncharacterized protein" | 0.651 | 0.311 | 0.370 | 8.8e-167 | |
| RGD|1593265 | 3064 | Atm "ataxia telangiectasia mut | 0.651 | 0.310 | 0.370 | 1.7e-165 | |
| UNIPROTKB|Q6PQD5 | 3057 | ATM "Serine-protein kinase ATM | 0.65 | 0.310 | 0.361 | 6.6e-164 | |
| UNIPROTKB|J9JHR5 | 3057 | ATM "Uncharacterized protein" | 0.647 | 0.309 | 0.367 | 1e-163 | |
| UNIPROTKB|E1C0Q6 | 3069 | ATM "Uncharacterized protein" | 0.591 | 0.281 | 0.370 | 6.5e-160 | |
| UNIPROTKB|F1PEL7 | 3065 | ATM "Uncharacterized protein" | 0.623 | 0.296 | 0.359 | 6.4e-159 |
| ZFIN|ZDB-GENE-040809-1 atm "ataxia telangiectasia mutated" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1573 (558.8 bits), Expect = 4.8e-174, Sum P(3) = 4.8e-174
Identities = 384/1037 (37%), Positives = 579/1037 (55%)
Query: 474 GLMRSLQQVGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANF 533
G++ LQ G +L Y GL K + PE +L+++AAWR+ WD LP
Sbjct: 1777 GIVEGLQNFGLCSILSTYLHGLE--KDGMEWGPELRELRFQAAWRSTQWDCDLP------ 1828
Query: 534 PSGQNIKSGHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAI 593
+ +K G +E+L + L ALR+ + F + L +++ V + S E+ +Y A+
Sbjct: 1829 ERNEKLKPG-INESLFNALQALRDKEFSLFEQTLNYARGREVEELCRGSLEAVSSLYPAL 1887
Query: 594 VKLQILCHLGVAWDIRWKS-SGESIN-IYPEKQK---IVSEPVIPTVGQLSWLNTEWSSI 648
LQ + L ++ + + S+N +Y + Q+ ++++ V + L SSI
Sbjct: 1888 CNLQRISELQSVEELFSRPVTDSSLNEVYRKWQQHSDLLTDSDFSLVEPVLALR---SSI 1944
Query: 649 LKRTQLHMNLLEPFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELK- 707
+ L + +P + L+ S HL+E R A A+ +K
Sbjct: 1945 --QEALISSETDPDR--KNYLISTYS------SHLMELCRLARSAGNTQLAERAVFHMKQ 1994
Query: 708 --FLYTGPGDQCSTVYWLGRLEEAKLLRAQGQHEMAINLAKYISENYES----NEEAPDV 761
+ +G G W +LEEA++ + +H +A+ L K + ++ N V
Sbjct: 1995 HNLVMSGSGSSS----WAWQLEEAQVFWVKKEHGLALELLKQMIHKLDNLVCVNPAVVPV 2050
Query: 762 Y----RLVGKWLAESRSSNSRIILENYLKPAVSFSEDQRTTDKKSIERQCQTHFHLAHYA 817
Y RL G WLAES + +ILENYL+ AV ED K ++ Q +F LA ++
Sbjct: 2051 YSECLRLCGSWLAESCLESPAVILENYLERAVEVIEDLWRFKSKLQSQKTQAYFSLARFS 2110
Query: 818 DALFKSYEERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLA 877
DA ++ E + S+E++ KH +E L K Y++K+Q ++L
Sbjct: 2111 DAQYQGIENYMKSSEFE-----NKHALLEKAKEEVDLMRERKVNNNRYTVKVQ---RELE 2162
Query: 878 MDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYD--VFRLVSLWFSLSSRQNVIKNMVD 935
+D + L DR+ FL A+E Y CL +G+++D VFRL SLW + + V M
Sbjct: 2163 LDVKALANLQADRNRFLLKAVENYIECLELGEEHDTWVFRLASLWLENADVKAVNDKMKS 2222
Query: 936 TIDEVQSYKFIPLVYQIASRMGS-TKDALGLHN--FQFALVSLVKKMAIDHPYHTIFQLL 992
+ ++ SYKF+PL+YQ+A+RMG+ ++ + F L L+ + ++DHP+HT+F +L
Sbjct: 2223 GVKKIPSYKFLPLMYQLAARMGTKVSSSMASQDVGFHHVLNELICQSSVDHPHHTLFIIL 2282
Query: 993 ALANGDRIKDKQRSRNS-------FVVDMDKKXXXXXXXXXXSSYHGAIIRQMKQMVDVY 1045
AL N ++ RSR+S +D+++ +++ ++ + + Y
Sbjct: 2283 ALVNANKDDSFSRSRSSKSSARQPSPLDLERAEVARKIIDVVRKKRAKMVKDIEMLCNAY 2342
Query: 1046 IKLAELETRREDTNKR-IQLPRE--IRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKG 1102
I LA ++ R T K+ I +P E + ++ LE V + T + +D + +Y + +
Sbjct: 2343 ITLAYMDASRHKTEKKAIPIPAEQPLMQIKDLEDVIIPTMDIKVDPSGRYED--VVTVRS 2400
Query: 1103 LAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRD 1162
+ G+N PK+++C GSDG RQL K G DDLRQDAVM+Q F + +T L+ + +
Sbjct: 2401 FKRHFHLAGGVNLPKIIDCEGSDGISRRQLVK-GQDDLRQDAVMQQVFHMCSTLLQRNAE 2459
Query: 1163 TWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCR 1222
T KR+L +R YKVVPF+ +G+LEW GTVP+G++L+ + GAH R+ DW+ + CR
Sbjct: 2460 TRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPQK--GAHKRFRPQDWANMLCR 2517
Query: 1223 EHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMV 1277
+ M + DK AF EVC+NFRPV YF +ERFL PA W E+RLAYTRSVA SS+V
Sbjct: 2518 KKMMEAQRMEFNDKLQAFTEVCQNFRPVFRYFCMERFLDPAIWLERRLAYTRSVATSSIV 2577
Query: 1278 GYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTG 1337
GYIVGLGDRH NILID+ T+E+VHIDLGVAFEQG +L TPE VPFRL+RDI+DGMG+TG
Sbjct: 2578 GYIVGLGDRHIQNILIDELTSELVHIDLGVAFEQGKILPTPETVPFRLSRDIVDGMGITG 2637
Query: 1338 VEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKA--LQR---QKEMD-- 1390
VEGVFRRCCEKT+ VMR+++EALLTIVEV ++DPL+ W ++PLKA LQ+ Q E++
Sbjct: 2638 VEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQQHDEQAELNAT 2697
Query: 1391 -------DDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDA 1443
D++ET + D NK AER L+R+++KL G E G + SV GQV LIQ A
Sbjct: 2698 LNPTPGGDEIETHRKA-SDSQSFNKVAERVLLRLQEKLKGVEDGTVLSVGGQVNLLIQQA 2756
Query: 1444 IDPERFCLMFPGWGAWL 1460
+DP+ +FPGW AW+
Sbjct: 2757 MDPKNLSRLFPGWQAWV 2773
|
|
| MGI|MGI:107202 Atm "ataxia telangiectasia mutated homolog (human)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5MPF8 atm "Ataxia telangiectasia mutated" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q13315 ATM "Serine-protein kinase ATM" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BEI6 ATM "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1593265 Atm "ataxia telangiectasia mutated" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6PQD5 ATM "Serine-protein kinase ATM" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9JHR5 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0Q6 ATM "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEL7 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.737 |
| 3rd Layer | 2.7.11 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | ATM | ATM (ATAXIA-TELANGIECTASIA MUTATED); 1-phosphatidylinositol-3-phosphate 5-kinase; encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. ; Serine/threonine protein kinase which activates checkpoint sig [...] (3845 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | BRCA1 | • | 0.871 | ||||||||
 | H2AXA | • | 0.867 | ||||||||
 | RAD50 | • | • | 0.847 | |||||||
 | GAMMA-H2AX | • | 0.821 | ||||||||
 | ATRAD51 | • | 0.788 | ||||||||
 | MRE11 | • | 0.786 | ||||||||
 | PARP2 | • | 0.748 | ||||||||
 | ERCC1 | • | 0.677 | ||||||||
 | APP | • | 0.677 | ||||||||
 | WEE1 | • | 0.659 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1460 | |||
| cd05171 | 279 | cd05171, PIKKc_ATM, Ataxia telangiectasia mutated | 1e-173 | |
| cd00892 | 237 | cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and | 1e-88 | |
| cd05164 | 222 | cd05164, PIKKc, Phosphoinositide 3-kinase-related | 1e-82 | |
| cd05169 | 280 | cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat | 3e-75 | |
| COG5032 | 2105 | COG5032, TEL1, Phosphatidylinositol kinase and pro | 2e-72 | |
| smart00146 | 240 | smart00146, PI3Kc, Phosphoinositide 3-kinase, cata | 2e-67 | |
| cd00142 | 219 | cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI | 2e-60 | |
| pfam00454 | 233 | pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- | 5e-53 | |
| cd05172 | 235 | cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas | 6e-53 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 1e-45 | |
| cd00896 | 350 | cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3 | 3e-13 | |
| pfam02259 | 350 | pfam02259, FAT, FAT domain | 8e-13 | |
| cd05167 | 311 | cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinas | 1e-12 | |
| cd05168 | 293 | cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase | 2e-12 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 3e-12 | |
| cd00891 | 352 | cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), | 6e-12 | |
| cd00893 | 289 | cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4 | 1e-11 | |
| cd05163 | 253 | cd05163, TRRAP, TRansformation/tRanscription domai | 1e-11 | |
| cd05173 | 362 | cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase | 3e-11 | |
| pfam02260 | 33 | pfam02260, FATC, FATC domain | 6e-09 | |
| cd05165 | 366 | cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K) | 1e-08 | |
| cd05174 | 361 | cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase | 2e-06 | |
| cd00894 | 365 | cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase | 9e-06 | |
| cd05166 | 353 | cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K | 6e-05 | |
| cd05175 | 366 | cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase | 5e-04 |
| >gnl|CDD|119431 cd05171, PIKKc_ATM, Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Score = 516 bits (1332), Expect = e-173
Identities = 181/283 (63%), Positives = 221/283 (78%), Gaps = 9/283 (3%)
Query: 1100 FKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRN 1159
+ GINAPK++ C GSDG KY+QL K G+DD RQDAVMEQ F LVNT L
Sbjct: 1 VSKFKDVFTTAGGINAPKIITCVGSDGKKYKQLLKGGDDD-RQDAVMEQVFQLVNTLLER 59
Query: 1160 HRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFL 1219
+++T KR+L +RTYKVVP +P AGILEWVDGT+PLG+YL+G+T GAH RY GDW+
Sbjct: 60 NKETRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYLVGAT---GAHERYRPGDWTAR 116
Query: 1220 KCREHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAAS 1274
KCR+ M+ V+ ++ F ++C+NFRPV YFFLE+FL P WFE+RLAYTRSVA S
Sbjct: 117 KCRKAMAEVQKESNEERLKVFLKICKNFRPVFRYFFLEKFLDPQDWFERRLAYTRSVATS 176
Query: 1275 SMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMG 1334
S+VGYI+GLGDRHA NILID+ TAEVVHIDLG+AFEQG +L PE VPFRLTRDI+DGMG
Sbjct: 177 SIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFEQGKILPVPETVPFRLTRDIVDGMG 236
Query: 1335 VTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWAL 1377
+TGVEGVFRRCCEKTL V+R NK+A+LTI+EV ++DPLY W +
Sbjct: 237 ITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSWTV 279
|
ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transition. Patients with the human genetic disorder Ataxia telangiectasia (A-T), caused by truncating mutations in ATM, show genome instability, increased cancer risk, immunodeficiency, compromised mobility, and neurodegeneration. A-T displays clinical heterogeneity, which is correlated to the degree of retained ATM activity. Length = 279 |
| >gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >gnl|CDD|214538 smart00146, PI3Kc, Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase | Back alignment and domain information |
|---|
| >gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119422 cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|216950 pfam02259, FAT, FAT domain | Back alignment and domain information |
|---|
| >gnl|CDD|119427 cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119428 cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119417 cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119419 cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119433 cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|202180 pfam02260, FATC, FATC domain | Back alignment and domain information |
|---|
| >gnl|CDD|119425 cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119434 cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119420 cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119426 cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|88554 cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1460 | |||
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 100.0 | |
| KOG0890 | 2382 | consensus Protein kinase of the PI-3 kinase family | 100.0 | |
| KOG0891 | 2341 | consensus DNA-dependent protein kinase [Replicatio | 100.0 | |
| COG5032 | 2105 | TEL1 Phosphatidylinositol kinase and protein kinas | 100.0 | |
| KOG0889 | 3550 | consensus Histone acetyltransferase SAGA, TRRAP/TR | 100.0 | |
| cd05171 | 279 | PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat | 100.0 | |
| cd05170 | 307 | PIKKc_SMG1 Suppressor of morphogenetic effect on g | 100.0 | |
| cd05163 | 253 | TRRAP TRansformation/tRanscription domain-Associat | 100.0 | |
| cd05169 | 280 | PIKKc_TOR TOR (Target of rapamycin), catalytic dom | 100.0 | |
| cd05172 | 235 | PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK) | 100.0 | |
| cd00892 | 237 | PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela | 100.0 | |
| cd05164 | 222 | PIKKc Phosphoinositide 3-kinase-related protein ki | 100.0 | |
| cd00142 | 219 | PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f | 100.0 | |
| cd00891 | 352 | PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic | 100.0 | |
| cd00896 | 350 | PI3Kc_III Phosphoinositide 3-kinase (PI3K), class | 100.0 | |
| cd05166 | 353 | PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I | 100.0 | |
| cd05165 | 366 | PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, | 100.0 | |
| cd05177 | 354 | PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05168 | 293 | PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T | 100.0 | |
| smart00146 | 202 | PI3Kc Phosphoinositide 3-kinase, catalytic domain. | 100.0 | |
| cd00894 | 365 | PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05174 | 361 | PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05176 | 353 | PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd00893 | 289 | PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I | 100.0 | |
| cd05173 | 362 | PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| PF00454 | 235 | PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina | 100.0 | |
| cd05167 | 311 | PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), | 100.0 | |
| cd00895 | 354 | PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| cd05175 | 366 | PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| KOG0906 | 843 | consensus Phosphatidylinositol 3-kinase VPS34, inv | 100.0 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 100.0 | |
| KOG0904 | 1076 | consensus Phosphatidylinositol 3-kinase catalytic | 100.0 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 100.0 | |
| KOG0902 | 1803 | consensus Phosphatidylinositol 4-kinase [Signal tr | 99.96 | |
| KOG0903 | 847 | consensus Phosphatidylinositol 4-kinase, involved | 99.93 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.91 | |
| PF02260 | 33 | FATC: FATC domain; InterPro: IPR003152 The FATC do | 99.34 | |
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 98.94 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 95.47 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 94.07 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 89.86 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 88.38 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 87.92 | |
| smart00145 | 184 | PI3Ka Phosphoinositide 3-kinase family, accessory | 87.87 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 86.61 | |
| cd00870 | 166 | PI3Ka_III Phosphoinositide 3-kinase (PI3K) class I | 82.99 | |
| cd00872 | 171 | PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, | 82.58 | |
| PF13575 | 370 | DUF4135: Domain of unknown function (DUF4135) | 80.7 | |
| cd00864 | 152 | PI3Ka Phosphoinositide 3-kinase family, accessory | 80.46 |
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-176 Score=1696.93 Aligned_cols=1267 Identities=40% Similarity=0.591 Sum_probs=1010.9
Q ss_pred cccCCChhHHHHHHHHHHhhcCCCcccHHHHHHHHHhhhCCCCCcEEEEecCCCccccccccCCCCCCCCCccceeccCc
Q 000498 5 VDWHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACRPINHGSGSATEFNFHLDA 84 (1460)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1460)
.+|+.+++++..+|..+++-....+-+.....-+|+.+++..|+|.++|++|+..+++|+-.-..+. .+.-+.-.+-.
T Consensus 1510 ~~~q~~~e~v~~~~~~~q~~~~~~~~~~~e~~~~~~~~v~~~~~~~L~~~~~~~~~~s~g~~i~~~~--~~~n~~~~~K~ 1587 (2806)
T KOG0892|consen 1510 WFWQKSPEIVDLVHYYPQTDPRLCDTSNYEPSKDFLWKVICQDDCSLLFKLPILLDSSIGIQIRMFF--EGSNIMELTKN 1587 (2806)
T ss_pred hHHhcCccceechhhcccCChhhhhhcccCchhhhhhchhccccceEEEEcCcccccchhhhhhhcc--ccchhhhhhhh
Confidence 4799999999999999999999999999999999999999999999999999998877754432222 23334444556
Q ss_pred cchHHHHHHHHHHHHHhhhcCcchhhchHHHHHHHHhccccccchhhchhHHHHHHHHHhhccCcchhHHhhhhchhhhh
Q 000498 85 GISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKGQRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKF 164 (1460)
Q Consensus 85 ~~~~~~~~~il~~l~~~l~~~~~~~~~~a~~~L~~ilst~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1460)
++.++........+..+..+..+.+.+...++....+++-.+......++.|.+.+++++
T Consensus 1588 ~i~~~dk~~~~~~~~~~~~~~~~~~~~il~~t~~es~s~w~s~~~ls~f~~c~~~~~~~~-------------------- 1647 (2806)
T KOG0892|consen 1588 LIFPLDKITLDSFLKTLVSEEGSFIIDILQQTNNESLSNWLSEFALKLFNMCGRSSTTHS-------------------- 1647 (2806)
T ss_pred hccchhHHHHHHHHHHHhhccchhHHHHHhhhhccchhhHHHHHHHHHHHHHhccCCchh--------------------
Confidence 788888888899999999999999999999999999999888888777888877777632
Q ss_pred hcCCCCCCCCcccccCCCCHHhhHHHHHHHhhccCCchhhhhcHHHHhhcHhHHHHHhHHHHHHHhcCCCcchhHHHHHH
Q 000498 165 KANGISPEKSTVWETDGKTFETWICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLIS 244 (1460)
Q Consensus 165 ~~~~~~~~~~~~w~~~~~s~~~Wi~~l~~~Ll~~~~~~~Lr~~~~l~~~~~~~A~~LlP~~v~~i~~~~d~~~~~~~~ls 244 (1460)
|.++......|++.++..+|-.+.+.. |..+....--+-+.++|.+..+
T Consensus 1648 ------------~st~~~~~~t~i~~~i~~~l~~~s~~~---~~~~~~~~~yi~~~~~~sl~~n---------------- 1696 (2806)
T KOG0892|consen 1648 ------------LSTYMANFSTSICQLIICLLLLESDFN---PGNNLKQKDYIFELILSSLLKN---------------- 1696 (2806)
T ss_pred ------------hccccccccHHHHHHHHHHHHhhcccc---HHHHHHHHHHHHHHHhhccccc----------------
Confidence 444445578999999988874333322 4445544444444444443311
Q ss_pred HHHHhhhhhcchhhhHHHHHHHHHHHHHhHhhHhhhccCCCCCcccccccccCCCCCCCccchhhhhhhhhhcccccccc
Q 000498 245 SQVQKYIFTESNKLIKSIQVFLNALNELRLCHVMERSSSVPPKRESSKYVKHSGSSAKPRSTSAKARDVVATSNATMTTS 324 (1460)
Q Consensus 245 ~~~~~~~~~~~~~~~~~iq~~l~~~~~Lr~~~~~er~~~~p~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 324 (1460)
.-....+-+|.+.++|.+ ++-.+ -+.
T Consensus 1697 -------------~~~~~~m~~ni~~~~~~~---~~~~~--------------------------------------~n~ 1722 (2806)
T KOG0892|consen 1697 -------------SNSIFKMDMNILKYLRRQ---LGCHA--------------------------------------FNP 1722 (2806)
T ss_pred -------------hhHHHHHHHHHHHHHHHh---hchhh--------------------------------------hcc
Confidence 011233455666666654 11100 023
Q ss_pred cccccccccCHHHHHHHHHHhchhhHHhhhhHhHhHHhhccccCCCCCCCcCCCcchHHHHHHHHHhhcCCchhhhhhhc
Q 000498 325 WDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHYKSLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQ 404 (1460)
Q Consensus 325 ~~~~~wL~Id~~~lA~aA~~C~ay~tALly~E~~~~~~~~~~~~~~~~~s~~~~~~~~~e~L~~Iy~~IdEPD~~yGi~~ 404 (1460)
|...+|+++++...+-++.+|.+|-..++|.=+.-.+ ..+........+++|.++|+.|++||++||+..
T Consensus 1723 ~~~~~~~~~~~~~~~~~~~~~~~~e~s~~~~t~~~~k----------~k~~e~~~~~lqDil~~~y~~I~~pD~lyG~~~ 1792 (2806)
T KOG0892|consen 1723 FEIYYWLPIVYSVAASTAYDCLLFEYSLLSLTIHSPK----------NKRDELDITLLQDILKKAYESINCPDALYGIKR 1792 (2806)
T ss_pred hhhhccccHHHHHHHHHHHHHHHHHHHHHHHhhcCcc----------cchhHHHHHHHHHHHHHHHhhCCCcchhcccCC
Confidence 4456689999999999999998888888777552110 111122334456777888999999999999998
Q ss_pred ccchh-hHHHHHHhhCCHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCCccCCCCCchhhhhhccchhhHHHHHHHhhh
Q 000498 405 SHKLS-SQIVTLEHEGNWSKALEYYELQVRSDVMLQMDGNSGALSPHGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVG 483 (1460)
Q Consensus 405 ~~~l~-~~i~~yE~eg~W~kAL~~Yd~~l~~~~~~~~~~~s~~~~~~~~p~~~~~~~~~e~~~~~~~~~~GlmrcL~~lG 483 (1460)
...++ .+++.+||+++|.+||..||..-. .|+ + + ...|.+++|++.|
T Consensus 1793 ~~~~~~~~l~~~~he~~w~~aL~~~d~~~~------------------~~s-----s--~-------~~~~~~~sLq~~g 1840 (2806)
T KOG0892|consen 1793 PTSLKNLILITAEHEKNWPRALSYYDLADM------------------YPS-----S--E-------DEAGFINSLQNAG 1840 (2806)
T ss_pred cccccccccchhhhhhhHHHHHHhhcchhh------------------ccc-----h--H-------hHhHHHHHHHHhc
Confidence 77777 789999999999999999998653 133 0 1 2389999999999
Q ss_pred hhhHHHHhhhccccccCCCCCCcchhHHHHHHHHhcCCCCCcccccCCCCCCCcCcccchhhhhHHHHHHHHhcCChHHH
Q 000498 484 CMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSGQNIKSGHFHENLHSCLTALREGDSEEF 563 (1460)
Q Consensus 484 ~~~~L~~~~~gl~~~~~~~~~~~~~~~~~~eaAWrlg~WD~~~~~~~~~~~~~~~~~~~~f~~~L~~~L~Al~~~d~~~~ 563 (1460)
+.|++.+|++|++... ..++++..+..|++|||+|+||...+++-+ .+...+..||..+|.+|+|+++++++++
T Consensus 1841 ~~~I~~~y~~Gl~~~~--~~~~~~~~e~~Ye~awr~g~Wd~~t~~~~~----~~~~~~~~y~e~~f~~l~al~ere~e~~ 1914 (2806)
T KOG0892|consen 1841 FFHILEFYIDGLKSND--KIDEPSNEELVYEAAWRLGKWDILTLSLVD----QNKTKGDYYHESLFEALRALHEREIEGS 1914 (2806)
T ss_pred chhHHHHHhcChhhhh--hhhhhhhhhhhHHHHHhcCCcccCCcchhh----hhhhhchhHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999876 567788889999999999999986543211 1445677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhcc-CCccccccccccccCCCCCcchhhhhHHH
Q 000498 564 YRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHLGVAWDIRWKSS-GESINIYPEKQKIVSEPVIPTVGQLSWLN 642 (1460)
Q Consensus 564 ~~~i~~aR~~l~~~Ls~~s~ES~~~~y~~lvrLq~L~ELe~i~el~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 642 (1460)
..+|+.+|...+..++..+.||....|+.+.+||.+.+||.+.++.+... ++..-....+.....++..+.....+.+.
T Consensus 1915 yl~le~a~~~~v~~i~~~see~~~~~y~~l~~L~~l~~l~~i~~l~~~~~~~~~~~~~~~k~~t~~q~~~~~~~~~~~~~ 1994 (2806)
T KOG0892|consen 1915 YLHLEDARNKKVLLINPNSEESSLSFYATLYDLQFLVTLEPIRCLQSTADKHQSNTDILQKWKTNLQLSSQLMECLSLLI 1994 (2806)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhhhhHhhhhhhcchhhhhHHHHHHHHHHhhccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876322 00000000000000001111122233333
Q ss_pred HHHHHHHHhhhcchhhhhhhhHHHHHHHHhcccchHHHHHHHHHHHHHHhcCChhHHHHHHHHHhhhcCCCCCCCchhhh
Q 000498 643 TEWSSILKRTQLHMNLLEPFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTVYW 722 (1460)
Q Consensus 643 ~~W~~rl~~~~~~~~~~EpiL~~R~~vl~il~~~~~~~~~wl~~a~laRkag~~~~A~~aL~~l~~l~~~~~~q~~~~~~ 722 (1460)
..|+..+...+.+...-++.++.+..++...++....+....+.+.+.++-.+ .+.+...+.+.++
T Consensus 1995 ~d~n~l~s~~~l~~~l~~~~~~~~~~~l~~~g~e~~~la~~~~~~~~~~~~~r--~~~~i~~~~~~~~------------ 2060 (2806)
T KOG0892|consen 1995 EDRNVLLSLLQLHKQLSESQLADLASLLKYYGLELCKLAESFLIADLLQNIAR--AFPVIMLSIKLLC------------ 2060 (2806)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhchhhHHhHHH--hhHHHHHHHHHHh------------
Confidence 33333333333333333333333333333333333223332333333332222 1222233332222
Q ss_pred hHhHHHHHHHHHcCChHHHHHHH-------------HHHH-hhccCCCchhHHHHHHHHHHHHhhcCChHHHHHHhhhhh
Q 000498 723 LGRLEEAKLLRAQGQHEMAINLA-------------KYIS-ENYESNEEAPDVYRLVGKWLAESRSSNSRIILENYLKPA 788 (1460)
Q Consensus 723 ~a~lE~Ak~LWa~Ge~~~AI~~L-------------k~l~-~~~~~~~~~a~ll~llG~Wlaetr~e~~~~I~~~Y~~~a 788 (1460)
.++.|+..|+++....+-..| .... ++...+....++++.+|+|++|+++|++..|+++|+++|
T Consensus 2061 --~~s~aq~~~k~~~~~~~e~iL~~~~~kne~~~~~s~~~~~~~~lk~~~~~~~a~~g~Wlaetk~ens~~i~e~yl~~a 2138 (2806)
T KOG0892|consen 2061 --KFSLAQENLKHDIDKLSEAILWQRDEKNEAIISLSESLAKNNSLKEFPSDIYAVLGKWLAETKSENSALISEKYLEKA 2138 (2806)
T ss_pred --hhhhhhhhccchhhhhHHHHHHHHHhhhhHHHHHHhhhhhcchhhhhHHHHHHHHHHHHHHhhccchhhhHHHHHHHH
Confidence 233444444444332222222 2111 222223456889999999999999999999999999999
Q ss_pred hhcccccccch-hHHHHHhhhhhhhHHhhHHHHHhhHHHHhccHHHHHHHHHhhhhHHHHHHHHHHHhhcCccccchhhH
Q 000498 789 VSFSEDQRTTD-KKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSI 867 (1460)
Q Consensus 789 ~~l~~~~~~~~-~~~~~~~~~~~~~lA~f~D~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~y~~ 867 (1460)
+.+++.++... ++.......+++++|+|.|.+|+.+++|+.+.+|+.+++++++.+++++.+.++-....+ .
T Consensus 2139 ~~~ae~~d~e~~~~~~~~~s~a~~~~akysd~~~~~~~~~~~sse~et~~~l~k~~~~~~~~~~er~~q~~~-------~ 2211 (2806)
T KOG0892|consen 2139 VSLAEHYDNESCKALIYCQSFAQFCLAKYSDPDYQEDEERRSSSEFETLKDLQKLERSTVEASNEREEQMRK-------N 2211 (2806)
T ss_pred HHHhhhcchhHHHHHHhHHHHHHHHHHhccCchhhhHHHHHhHHHHhhHHHHHHHHHhhhhhhHHHHHHHHH-------H
Confidence 99888763322 222344568999999999999999999999999999999999999888876554322111 3
Q ss_pred HHHHHHHHHhhcHHHHHHhHhhHHHHHHHHHHHHHHHhhcCCccc---hhHHHHHHHhccchHHHHHHHHHhhccccccc
Q 000498 868 KIQELQKQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYD---VFRLVSLWFSLSSRQNVIKNMVDTIDEVQSYK 944 (1460)
Q Consensus 868 ~~~~~~~~~~~D~~e~~~l~~~r~~fl~~Al~~Yl~sL~~~~~~d---v~RllsLWf~~~~~~~v~~~~~~~l~~iPs~k 944 (1460)
+..+.++++.+|+++++++..+|.+||.+|++||++|+..|++|| ++|+|+|||++++.+++++.|.+.+.+||+||
T Consensus 2212 ~~~~~~rq~~lDe~~l~~l~~~r~~fL~~Alt~Yl~cl~~~~~~D~~~i~R~cslWfsns~~~evn~~mk~~i~~ipsyK 2291 (2806)
T KOG0892|consen 2212 HHVRVQRQLILDEEELLALSEDRSKFLTLALTNYLNCLSESDEYDVDLIFRCCSLWFSNSHLKEVNNSLKHEIQTVPSYK 2291 (2806)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccHHHHHHHhhhhccccchHHHHHHHHHHhccCCcch
Confidence 445678999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred hhhhhhhhhccccCCccccccccHHHHHHHHHHHHHHhCChhhhhHHhhcccCCc-hhhhhcccchhhhhhhHHHHHHHH
Q 000498 945 FIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDR-IKDKQRSRNSFVVDMDKKLAAENL 1023 (1460)
Q Consensus 945 fl~~lpQL~sRl~~~~~~~~~~~f~~~L~~Ll~~i~~~hP~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 1023 (1460)
|+||++||+|||+. .++..||+.|..|+.+++++||||++|+|+++.+..+ .++..++|.+ ++.+|..+++.+
T Consensus 2292 Fip~~yQlAaRl~~----~~~~~fq~~L~~Li~r~~~dhPyhtly~L~~L~~~~rd~e~~n~sr~s--l~~~rki~a~l~ 2365 (2806)
T KOG0892|consen 2292 FIPLVYQLAARLGN----SENNSFQKSLTSLIYRVGRDHPYHTLYQLLSLVNAVRDNEDENRSRGS--IDRDRKIAAELD 2365 (2806)
T ss_pred hHHHHHHHHHHhcc----ccCchHHHHHHHHHHHHhccCchHHHHHHHHHHhcCcChhhhhhcccc--cchhHHHHHHHh
Confidence 99999999999994 2467899999999999999999999999999999877 5666777776 788999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhhhcccccccc-ccchhh--hhhccccCcccccccccCCCCCCccCCCCcCcc
Q 000498 1024 LEELSSYHGAIIRQMKQMVDVYIKLAELETRREDTNKR-IQLPRE--IRCLRQLELVPVVTATVPIDCTCQYNEGSFPYF 1100 (1460)
Q Consensus 1024 l~~~~~~~~~~~~~~~~l~~~~~~la~~~~~~~~~~~~-~~l~~~--l~~l~~l~~~p~~t~~lp~~~~~~~~~~~~~~i 1100 (1460)
+.......+.++++++.+|++|+.+|+.++...+++.+ +.+|.. +.+..+++.+|+||+++++++++.| +++|+|
T Consensus 2366 ~~~v~~~~~~~v~~v~~lc~~yI~lAnl~~~q~~t~~k~v~~p~~~~~~K~~nl~~v~~pT~ev~v~~s~~~--~~~p~i 2443 (2806)
T KOG0892|consen 2366 LCDVNQGAGNMVRQLECLCEAYISLANLKTSQNDTTSKLVRLPGYQWFLKQLNLEGVPPPTMNVKVNDSGDY--GNIPTV 2443 (2806)
T ss_pred hhHhhccchhHHHHHHHHHHHHHHHhcCcccccchhhhhhcCccccHHHhhhhccCCCCCCCCccccCCccc--CCCceE
Confidence 99888889999999999999999999987766666665 566664 4455667889999999999887644 568999
Q ss_pred ccccceEEEecCCCcceEEEEEeCCCceEeeeeecCccchhHHHHHHHHHHHHHHHHhhCcccccCCceeccceEEEcCC
Q 000498 1101 KGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTP 1180 (1460)
Q Consensus 1101 ~~f~~~v~v~~s~~~Pk~i~~~gsdG~~y~~L~K~g~dDlRqD~r~~Qlf~~iN~lL~~~~et~~r~L~i~tY~ViPLs~ 1180 (1460)
.+|.++|.+++|++.||+|+|+||||++|++|+|+|+||||||++|+|+|+++|++|.++++|++|+|.||||+||||+|
T Consensus 2444 ~s~~~~v~~~~GinaPkiI~c~gSDG~~~kqLVK~gnDDLRQDAVMeQvF~~vN~lL~~~~et~krkL~irTYKVvPls~ 2523 (2806)
T KOG0892|consen 2444 VSFDDTVTFAGGINAPKVITCVGSDGKTYKQLVKGGNDDLRQDAVMEQVFGQVNTFLQNDRETRKRKLSIRTYKVIPLSP 2523 (2806)
T ss_pred EecccceeeecCccCCeEEEEEccCchhHHHHHhcccchHHHHHHHHHHHHHHHHHhhccHHHHhcccceeEEeeeecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEcCCCCchHHHhhhhccCCCCCCCcCCCcchhHHHHhhhcchH-----hHHHHHHHHHhhhhhhHHHHHHHHcC
Q 000498 1181 SAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFL 1255 (1460)
Q Consensus 1181 ~~GLIE~v~~t~sl~~il~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~k~~~f~~i~~~~~pvl~~~f~~~f~ 1255 (1460)
++|+||||.||+|+++++.... +|+|+||+|+||++.+||+.|++++ +|+++|.+||.+|+||||+||+|+||
T Consensus 2524 ~sGvlEwv~~tiplgeyLv~~~--~gah~ry~p~d~s~~~crk~m~~~q~k~~E~r~k~y~~vc~n~~PvfryFflEkF~ 2601 (2806)
T KOG0892|consen 2524 KAGVLEWVTNTIPLGEYLVVES--GGAHKRYRPNDWSLSKCRKLMSEVQKKSLETRLKAYDKVCRNIRPVFRYFFLEKFP 2601 (2806)
T ss_pred ccceeecccCCeehhhhhcccC--CccccccCCCCCChHHHHHHHHHHhcccHHHHHHHHHHHHhhchHHHHHHHHHhcC
Confidence 9999999999999999997644 8999999999999999999998776 89999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhhhccchhhheeccCCCCCCeeEEecCCCeEEEeecchhhccccCCCCCCCCCcccchhhhhcccc
Q 000498 1256 QPAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGV 1335 (1460)
Q Consensus 1256 ~~~~w~~~R~~ft~S~A~~S~vgyIlgLGDRH~~NILld~~tG~vvhIDfg~~f~~g~~l~~pE~VPFRLTrniv~~mG~ 1335 (1460)
+|.+||++|++||||+|+.|||||||||||||.+|||||..||+|||||||++||+|+.||+||+|||||||+||||||+
T Consensus 2602 dP~~WFekrlaYTrsvA~sS~VGyILGLGDRH~qNILid~~taEviHIDlGiAFEQGkilptPE~VPFRLTRDiVdgmGI 2681 (2806)
T KOG0892|consen 2602 DPADWFEKRLAYTRSVAASSMVGYILGLGDRHGQNILIDQQTAEVIHIDLGIAFEQGKILPTPETVPFRLTRDIVDGMGI 2681 (2806)
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHhcccchhhhheeecccccceEEEeeeeehhcCCcCCCCCcccceeehhhccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHhcChHHHHHHHHHHccCCCcccccChhHHHhhhhcccccccCCCCCCcccccc-chhHHHHH
Q 000498 1336 TGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMDDDLETGLEGPEDEYEG-NKDAERAL 1414 (1460)
Q Consensus 1336 ~g~eG~Fr~~~~~t~~~Lr~~~~~l~~iL~~f~~DpL~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~~a~~~l 1414 (1460)
+||||+||+|||.||.+||++++.+++|||+|+||||++|.++|.|+..+|++ ++..+.+.++....... +..|.|++
T Consensus 2682 tGveGvFrRccE~t~~vlR~~~~~lltileVl~yDPLf~W~msplK~~~~q~~-e~~e~~n~~~~~~~~~~nd~~a~r~l 2760 (2806)
T KOG0892|consen 2682 TGVEGVFRRCCEFTLEVLRREKESLLTILEVLLYDPLFSWLMSPLKALKKQKE-EDEENFNLSGNITEDASNDRNAVRAL 2760 (2806)
T ss_pred cCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcchHHHhhcHHHHHHHHHh-hcchhcccccchhhhhccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986 33333443333333333 57899999
Q ss_pred HHHHhhccCCCCCCCcCHHHHHHHHHHHhcCchhhhhhCcccccCC
Q 000498 1415 IRVKQKLDGYEGGEMRSVHGQVQQLIQDAIDPERFCLMFPGWGAWL 1460 (1460)
Q Consensus 1415 ~rv~~KL~g~~~~~~lsv~~qV~~LI~~Atd~~nL~~m~~gW~Pwl 1460 (1460)
.|+++||.|++.|..+||++||++||||||||+|||+|||||.||+
T Consensus 2761 ~r~q~kl~g~e~g~~~sVe~qv~~LIqqA~dpsnLs~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2761 MRAQRKLDGVEQGTMLSVEAQVQELIQQATDPSNLSLMFPGWSAFQ 2806 (2806)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHhcCchhhhhhcCCCcCcC
Confidence 9999999999999999999999999999999999999999999996
|
|
| >KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG0902 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >smart00145 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain) | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >cd00870 PI3Ka_III Phosphoinositide 3-kinase (PI3K) class III, accessory domain (PIK domain); PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >cd00872 PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, accessory domain ; PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >PF13575 DUF4135: Domain of unknown function (DUF4135) | Back alignment and domain information |
|---|
| >cd00864 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1460 | ||||
| 2y3a_A | 1092 | Crystal Structure Of P110beta In Complex With Icsh2 | 9e-11 | ||
| 2x6f_A | 696 | The Crystal Structure Of The Drosophila Class Iii P | 7e-09 | ||
| 3ihy_A | 600 | Human Pik3c3 Crystal Structure Length = 600 | 2e-08 | ||
| 3ls8_A | 614 | Crystal Structure Of Human Pik3c3 In Complex With 3 | 2e-08 | ||
| 1e8x_A | 961 | Structural Insights Into Phoshoinositide 3-Kinase E | 5e-07 | ||
| 1e7u_A | 961 | Structure Determinants Of Phosphoinositide 3-Kinase | 5e-07 | ||
| 3l54_A | 966 | Structure Of Pi3k Gamma With Inhibitor Length = 966 | 4e-06 | ||
| 1he8_A | 965 | Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | 4e-06 | ||
| 3nzs_A | 954 | Structure-Based Optimization Of Pyrazolo -Pyrimidin | 4e-06 | ||
| 3ene_A | 959 | Complex Of Pi3k Gamma With An Inhibitor Length = 95 | 4e-06 | ||
| 1e8y_A | 966 | Structure Determinants Of Phosphoinositide 3-Kinase | 5e-06 | ||
| 4dk5_A | 959 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 5e-06 | ||
| 3qaq_A | 960 | Crystal Structure Of Pi3k-Gamma In Complex With Tri | 5e-06 | ||
| 3apc_A | 966 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 5e-06 | ||
| 3dbs_A | 960 | Structure Of Pi3k Gamma In Complex With Gdc0941 Len | 5e-06 | ||
| 3cst_A | 966 | Crystal Structure Of Pi3k P110gamma Catalytical Dom | 5e-06 | ||
| 4anv_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 6e-06 | ||
| 4anu_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 6e-06 | ||
| 4anx_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 2e-05 | ||
| 4ajw_A | 934 | Discovery And Optimization Of New Benzimidazole- An | 2e-05 | ||
| 2wxf_A | 940 | The Crystal Structure Of The Murine Class Ia Pi 3-K | 2e-05 | ||
| 3zim_A | 940 | Discovery Of A Potent And Isoform-selective Targete | 1e-04 | ||
| 4a55_A | 1096 | Crystal Structure Of P110alpha In Complex With Ish2 | 1e-04 | ||
| 3hhm_A | 1091 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 | ||
| 3hiz_A | 1096 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 | ||
| 2rd0_A | 1096 | Structure Of A Human P110alpha/p85alpha Complex Len | 1e-04 |
| >pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 1092 | Back alignment and structure |
|
| >pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase Vps34 In Complex With 3-Methyladenine Length = 696 | Back alignment and structure |
| >pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure Length = 600 | Back alignment and structure |
| >pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4- Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol Length = 614 | Back alignment and structure |
| >pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase Enzymatic Mechanism And Signalling Length = 961 | Back alignment and structure |
| >pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor Length = 966 | Back alignment and structure |
| >pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | Back alignment and structure |
| >pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And -Pyridine Inhibitors Of Pi3-Kinase Length = 954 | Back alignment and structure |
| >pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor Length = 959 | Back alignment and structure |
| >pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin And Staurosporine Length = 966 | Back alignment and structure |
| >pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A Pyridyl- Triazine Inhibitor Length = 959 | Back alignment and structure |
| >pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With Triazine-Benzimidazole 1 Length = 960 | Back alignment and structure |
| >pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With Ch5132799 Length = 966 | Back alignment and structure |
| >pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941 Length = 960 | Back alignment and structure |
| >pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In Complex With Organoruthenium Inhibitor E5e2 Length = 966 | Back alignment and structure |
| >pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors. Length = 980 | Back alignment and structure |
| >pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For The Treatment Of Phosphatase And Tensin Homologue (Pten)-Deficient Cancers Length = 934 | Back alignment and structure |
| >pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase P110delta In Complex With Pik-39. Length = 940 | Back alignment and structure |
| >pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted Covalent Inhibitor Of The Lipid Kinase Pi3kalpha Length = 940 | Back alignment and structure |
| >pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of P85alpha And The Inhibitor Pik-108 Length = 1096 | Back alignment and structure |
| >pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha And The Drug Wortmannin Length = 1091 | Back alignment and structure |
| >pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha Length = 1096 | Back alignment and structure |
| >pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex Length = 1096 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Length = 614 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-30
Identities = 85/525 (16%), Positives = 181/525 (34%), Gaps = 67/525 (12%)
Query: 874 KQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVFRLVSLWFSLSSRQNVIKNM 933
++ A+ R + D+ L L + D + S +NV +
Sbjct: 112 RRYAVARLR--QADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVSENVSNSG 169
Query: 934 VD--TIDEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPY--HTIF 989
++ ID Q TK+ N + L + + A + + ++
Sbjct: 170 INSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLY 229
Query: 990 QLLA--LANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSSYHGAIIRQMKQMVDVYIK 1047
+ + D + ++ ++ M + A ++ +++ + VD +
Sbjct: 230 WYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVH 289
Query: 1048 LA-ELETRREDTNKRIQLPREIRC-LRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAE 1105
L ++ + K+ + + + ++ L V +P++ + E
Sbjct: 290 LMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLE-------PQVKIRGIIPE 342
Query: 1106 SVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWK 1165
+ + P + DG KY + K G+D LRQD ++ Q L++ LR
Sbjct: 343 TATLFKSALMPAQLFFKTEDGGKYPVIFKHGDD-LRQDQLILQIISLMDKLLRKE----N 397
Query: 1166 RRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHM 1225
L + YKV+ + G ++++ + G+ +
Sbjct: 398 LDLKLTPYKVLATSTKHGFMQFIQSVP-----VAEVLDTEGSIQNF-------------- 438
Query: 1226 SNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGLGD 1285
+ E Y +S A ++ YI+G+GD
Sbjct: 439 --------------------FRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGD 478
Query: 1286 RHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEG--VFR 1343
RH N+L+ + T ++ HID G + P P +L +++++GMG T E FR
Sbjct: 479 RHLDNLLLTK-TGKLFHIDFGYILGRD---PKPLPPPMKLNKEMVEGMGGTQSEQYQEFR 534
Query: 1344 RCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKE 1388
+ C +R +L + + + + AL P K +++ ++
Sbjct: 535 KQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQD 579
|
| >2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Length = 696 | Back alignment and structure |
|---|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 1092 | Back alignment and structure |
|---|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Length = 1091 | Back alignment and structure |
|---|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Length = 940 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A Length = 33 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1460 | ||||
| d1e7ua4 | 369 | d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P | 2e-55 |
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1460 | |||
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d1e7ua1 | 201 | Phoshoinositide 3-kinase (PI3K) helical domain {Pi | 84.54 |