Citrus Sinensis ID: 000604
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1398 | 2.2.26 [Sep-21-2011] | |||||||
| Q9Y2I7 | 2098 | 1-phosphatidylinositol 3- | yes | no | 0.266 | 0.177 | 0.382 | 2e-71 | |
| Q9Z1T6 | 2097 | 1-phosphatidylinositol 3- | yes | no | 0.266 | 0.177 | 0.382 | 6e-71 | |
| P34756 | 2278 | 1-phosphatidylinositol 3- | yes | no | 0.203 | 0.124 | 0.443 | 1e-69 | |
| B0G126 | 2656 | 1-phosphatidylinositol 3- | yes | no | 0.192 | 0.101 | 0.498 | 1e-69 | |
| O59722 | 1932 | 1-phosphatidylinositol 3- | yes | no | 0.241 | 0.174 | 0.386 | 3e-67 | |
| O96838 | 1809 | Putative 1-phosphatidylin | yes | no | 0.263 | 0.203 | 0.337 | 3e-60 | |
| P39077 | 534 | T-complex protein 1 subun | no | no | 0.190 | 0.5 | 0.271 | 2e-21 | |
| Q5NVF9 | 545 | T-complex protein 1 subun | no | no | 0.205 | 0.526 | 0.242 | 2e-20 | |
| P49368 | 545 | T-complex protein 1 subun | no | no | 0.205 | 0.526 | 0.242 | 2e-20 | |
| Q4R963 | 545 | T-complex protein 1 subun | N/A | no | 0.205 | 0.526 | 0.246 | 2e-20 |
| >sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 | Back alignment and function desciption |
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Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 244/442 (55%), Gaps = 69/442 (15%)
Query: 1018 VVIAVFDDDPTSIISYALSSKEYED----------W--VADKLYDNDGS----------- 1054
V IAV + +P+SII++ALS KEY + W + L N S
Sbjct: 1658 VPIAVCEKEPSSIIAFALSCKEYRNALEELSKATQWNSAEEGLPTNSTSDSRPKSSSPIR 1717
Query: 1055 ---WSAGEIH----------KEGSAVSSFSAWQSFGSLDLD-------------YIHYGS 1088
S G+ + K+ S + SF + S DL Y G
Sbjct: 1718 LPEMSGGQTNRTTETEPQPTKKASGMLSFFRGTAGKSPDLSSQKRETLRGADSAYYQVGQ 1777
Query: 1089 YGSE-------DASSSVGTLFTDPKK--SPHLTISFGDESSTAGGKVKFSVTSYFAKQFD 1139
G E + V T K+ +PH+ + F D KF Y+A +F
Sbjct: 1778 TGKEGTENQGVEPQDEVDGGDTQKKQLINPHVELQFSD------ANAKFYCRLYYAGEFH 1831
Query: 1140 SLRKKCCPSGV-DFVRSLSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTELESFEEFA 1198
+R+ S DF+RSLS S W A+GGKS F + D+RFI+KQ+ + E++SF +FA
Sbjct: 1832 KMREVILDSSEEDFIRSLSHSSPWQARGGKSGAAFYATEDDRFILKQMPRLEVQSFLDFA 1891
Query: 1199 PEYFKYLTDSLNSRSPTCLAKILGIYQVSVKHLKGGKETKIDLMVMENLFFRRSISRVYD 1258
P YF Y+T+++ + PT LAKILG+Y++ K+ + E K+DL+VMENLF+ R +++V+D
Sbjct: 1892 PHYFNYITNAVQQKRPTALAKILGVYRIGYKNSQNNTEKKLDLLVMENLFYGRKMAQVFD 1951
Query: 1259 LKGSARSRYNTDTTG---TNKVLLDMNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLAS 1315
LKGS R+R TG + VLLD NLL+ +R PL++ S +K L +I +D+ FL+S
Sbjct: 1952 LKGSLRNRNVKTDTGKESCDVVLLDENLLKMVRDNPLYIRSHSKAVLRTSIHSDSHFLSS 2011
Query: 1316 VDVMDYSLLVGVDEERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIISPK 1375
++DYSLLVG D+ ELV+GIID++R +TWDK LE VK++GILGG + PT++SP+
Sbjct: 2012 HLIIDYSLLVGRDDTSNELVVGIIDYIRTFTWDKKLEMVVKSTGILGG-QGKMPTVVSPE 2070
Query: 1376 QYKKRFRKAMTSYFLTVPDQWS 1397
Y+ RF +AM YFL VPD W+
Sbjct: 2071 LYRTRFCEAMDKYFLMVPDHWT 2092
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The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. Plays a role in the biogenesis of endosome carrier vesicles (ECV)/ multivesicular bodies (MVB) transport intermediates from early endosomes. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0 |
| >sp|Q9Z1T6|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3 | Back alignment and function description |
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| >sp|P34756|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3 | Back alignment and function description |
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| >sp|B0G126|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1 | Back alignment and function description |
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| >sp|O59722|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2 | Back alignment and function description |
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| >sp|O96838|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1 | Back alignment and function description |
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| >sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1398 | ||||||
| 224101819 | 1725 | predicted protein [Populus trichocarpa] | 0.972 | 0.788 | 0.714 | 0.0 | |
| 224108341 | 1739 | predicted protein [Populus trichocarpa] | 0.956 | 0.768 | 0.7 | 0.0 | |
| 255570092 | 1651 | fyve finger-containing phosphoinositide | 0.956 | 0.809 | 0.713 | 0.0 | |
| 359472635 | 1711 | PREDICTED: LOW QUALITY PROTEIN: 1-phosph | 0.968 | 0.791 | 0.712 | 0.0 | |
| 297838923 | 1653 | predicted protein [Arabidopsis lyrata su | 0.948 | 0.802 | 0.622 | 0.0 | |
| 42563125 | 1648 | 1-phosphatidylinositol-4-phosphate 5-kin | 0.946 | 0.802 | 0.615 | 0.0 | |
| 297737713 | 1491 | unnamed protein product [Vitis vinifera] | 0.856 | 0.802 | 0.610 | 0.0 | |
| 218201185 | 1553 | hypothetical protein OsI_29312 [Oryza sa | 0.950 | 0.855 | 0.532 | 0.0 | |
| 242081509 | 1626 | hypothetical protein SORBIDRAFT_07g02093 | 0.962 | 0.827 | 0.516 | 0.0 | |
| 125603486 | 1544 | hypothetical protein OsJ_27396 [Oryza sa | 0.949 | 0.860 | 0.531 | 0.0 |
| >gi|224101819|ref|XP_002312432.1| predicted protein [Populus trichocarpa] gi|222852252|gb|EEE89799.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 2006 bits (5198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 997/1395 (71%), Positives = 1147/1395 (82%), Gaps = 35/1395 (2%)
Query: 15 REKQNEGNKEPLRAVVQGHFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVK 74
+EKQN+ NK+P +A++QGHFRALV++LL+ EGIK K+++ +WL I+T IAWQAA FVK
Sbjct: 345 KEKQNKINKDPTKAMIQGHFRALVAQLLQGEGIKASKDENNGEWLDIVTAIAWQAAAFVK 404
Query: 75 PDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGA 134
PDTSRGGSMDP DYVKVKCIA G+P +ST +KGVVCTKNIKHKRMT+QY+NPRLL+LGGA
Sbjct: 405 PDTSRGGSMDPVDYVKVKCIASGNPRDSTLVKGVVCTKNIKHKRMTTQYKNPRLLLLGGA 464
Query: 135 LEYQRVPNQLASFNTLLQQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEIS 194
LEYQ V NQLASFNTL+QQ ENDHLK+++SKIEALRPNVLLVEKSVS YAQ+ LL KEIS
Sbjct: 465 LEYQSVVNQLASFNTLVQQ-ENDHLKLIMSKIEALRPNVLLVEKSVSPYAQEYLLGKEIS 523
Query: 195 LVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSK 254
LVLNVK+PLLERIARCTGA I+PS +NISTTRLGHCELF++E+VSEEHETSNQFNKKPSK
Sbjct: 524 LVLNVKKPLLERIARCTGAQISPSFENISTTRLGHCELFRVERVSEEHETSNQFNKKPSK 583
Query: 255 TLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKM 314
TLM FEGCPRRLGC VLLRG CRE+LKKVKHV+QYAVFAAYHLSLETSFLADEGA+LPKM
Sbjct: 584 TLMSFEGCPRRLGCTVLLRGTCREKLKKVKHVIQYAVFAAYHLSLETSFLADEGASLPKM 643
Query: 315 RLKHSISKPERMMADNAISAIPSSKVAANYQEVADDSTRDDGSVSLRLEHGGLESLSEQL 374
++ SI+ PER ADN+IS IP A EVA S +DDGS+ L+ EH G ESL+ L
Sbjct: 644 TIRPSIAIPERTAADNSISVIPPMICHA---EVAL-SAQDDGSLGLKPEHEGSESLTGNL 699
Query: 375 NHSSVSSV-PLFLDHRYGDGPTDACNDNLEHDVG-LDFRSFNECEDLKVSIVNSF--DAL 430
+ + + P + R G+ + AC+ +L + G LD S ++CE LK+ V+ +
Sbjct: 700 DAGVIHPLSPCSVTCRSGNEFSIACHGDLVSNAGGLDAFSASQCEGLKMFAVSPGIKNLS 759
Query: 431 QQELQEIMGQEERQLGESHELMKFEGVNEDEVSGEYFSAADTNQSILVSFSSRCVLKGTV 490
Q ELQ+IM +EE QL +HE ++ E ++EDEVS EYFS DT QSILVSFSSRCVLKGTV
Sbjct: 760 QPELQDIMAEEEGQLLATHESVQSEKIDEDEVSSEYFSVTDTYQSILVSFSSRCVLKGTV 819
Query: 491 CERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSCCRSCNESAEAHVLCYTHQQGNLTISVK 550
CERSRLLRIKFYG+FDKPLGRYL DLF+Q SCCRSC E AEAHVLC+THQQGNLTI+V+
Sbjct: 820 CERSRLLRIKFYGNFDKPLGRYLRDDLFDQKSCCRSCKEPAEAHVLCFTHQQGNLTINVR 879
Query: 551 CLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELSFSNHA 610
LSSV+LPG+RDGKIWMWHRCLRCAH DGVPPATRRVVMSDAAWGLSFGKFLELSFSNHA
Sbjct: 880 SLSSVKLPGDRDGKIWMWHRCLRCAHIDGVPPATRRVVMSDAAWGLSFGKFLELSFSNHA 939
Query: 611 TANRIASCGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVHLPPSVLEFNGLLQQEWIRKE 670
TANR+A CGHSLQRDCLR+YGFGSM+ FRYSPIDIL+VHLPPS+LEFNG++QQEW RKE
Sbjct: 940 TANRVAPCGHSLQRDCLRFYGFGSMVVFFRYSPIDILNVHLPPSMLEFNGIVQQEWTRKE 999
Query: 671 AEELKVKMETLYAEISNVLEVMEQRSNSIGCEMSDSTDLKSHILELKVQLESERNDYIGL 730
A EL KMET Y EI VL+ MEQRS G E+SD+ +L++ I+ELK QL E+N+Y G+
Sbjct: 1000 AAELLGKMETFYGEIFGVLDSMEQRSKYFGSELSDTNELQNRIMELKDQLVKEKNNYSGI 1059
Query: 731 LQPVVMETSEPGQTAVDILELNRLRRALLIGSHAWDRQLYSLNSLLKKGSIAKAKQGNAS 790
LQ VME+ + QTA+DILELNRLRR LLIGSH W R+LYSL+ LLK + KAK+G+ S
Sbjct: 1060 LQLAVMESLQLDQTAMDILELNRLRRTLLIGSHVWYRKLYSLDCLLKTNYLVKAKEGDVS 1119
Query: 791 YAQLKELRTDLFCKDSKLDHDNEENVSGSLDSLESPANDLHLQQKEELNLPTLEPFGSEN 850
Y +LK+L+ D+FCKDSKLDHD+EEN+SG S E ND ++KE G E
Sbjct: 1120 YTELKDLKNDIFCKDSKLDHDHEENISGYSKSQEHVGNDFQSEKKET---------GEET 1170
Query: 851 SKLTSFLHNREEDVHSDGEITSTLSEKIDSAWTGTDQVVPLVSQTDRPQA---GF----V 903
+ T F N S LS++IDSAWTGTDQ+ V QA GF V
Sbjct: 1171 ASKTLFSDNPSH--------ASNLSDRIDSAWTGTDQLPIKVQPPHASQAEADGFQPVSV 1222
Query: 904 GQISKIDNSPFKRLASPVRVHSFDSALRFQERIARGLPHSLLHLSSIRSFHASGDYRSMV 963
Q + DN PF+R+ +P RVHSFDSALR QERI +GLP LHLS+IRSFHASGDYRSMV
Sbjct: 1223 RQPNLFDNPPFRRMVAPKRVHSFDSALRAQERIQKGLPP--LHLSTIRSFHASGDYRSMV 1280
Query: 964 RDPVSNVMRTYSQILPLEAQKLNLILSSTPSFISSASRMVEGARLLLPQRGDNDVVIAVF 1023
RDPVSN MRTYSQ LPLEA KLNL+ SST SFISSA+ M GARLLLP R ++D+VI V+
Sbjct: 1281 RDPVSNAMRTYSQTLPLEAHKLNLMHSSTHSFISSAANMAGGARLLLPVRANSDLVIGVY 1340
Query: 1024 DDDPTSIISYALSSKEYEDWVADKLYDNDGSWSAGEIHKEGSAVSSFSAWQSFGSLDLDY 1083
D+DP S++SYALSSKE+EDWV D+ ++ G WS + KE SA SSF++WQS S+DLDY
Sbjct: 1341 DNDPASVVSYALSSKEHEDWVTDRSNESAGIWSTIKHSKEDSAASSFTSWQSLDSMDLDY 1400
Query: 1084 IHYGSYGSEDASSSVGTLFTDPKKSPHLTISFGDESSTAGGKVKFSVTSYFAKQFDSLRK 1143
+ YGSYGSED S++GTLF D KKSPHLTIS+ D SS A GKV+FSVT YFAKQFD LRK
Sbjct: 1401 MSYGSYGSEDPFSTLGTLFMDSKKSPHLTISYEDASSIAEGKVRFSVTCYFAKQFDFLRK 1460
Query: 1144 KCCPSGVDFVRSLSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFK 1203
KCCPS VDFVRSLSR +KWSAQGGKSNV+FAKSLDERFIIKQVKKTELESFE+FAPEYFK
Sbjct: 1461 KCCPSDVDFVRSLSRCQKWSAQGGKSNVYFAKSLDERFIIKQVKKTELESFEKFAPEYFK 1520
Query: 1204 YLTDSLNSRSPTCLAKILGIYQVSVKHLKGGKETKIDLMVMENLFFRRSISRVYDLKGSA 1263
YL DSLNSRSPTCLAKILGIYQV+VKHL+G KETK+DLMVMENLFF R+I RVYDLKGS+
Sbjct: 1521 YLIDSLNSRSPTCLAKILGIYQVTVKHLRGVKETKMDLMVMENLFFNRNIGRVYDLKGSS 1580
Query: 1264 RSRYNTDTTGTNKVLLDMNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLASVDVMDYSL 1323
RSRYNTDT+G+NKVLLD NL+E LRTEP+FLGSKAKRSLERAIWNDTSFLASVDVMDYSL
Sbjct: 1581 RSRYNTDTSGSNKVLLDTNLVERLRTEPIFLGSKAKRSLERAIWNDTSFLASVDVMDYSL 1640
Query: 1324 LVGVDEERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIISPKQYKKRFRK 1383
LVGVD+ERKELVLGIIDFMRQYTWDKHLETWVK+SGILGGPKNASPTI+SPKQYKKRFRK
Sbjct: 1641 LVGVDDERKELVLGIIDFMRQYTWDKHLETWVKSSGILGGPKNASPTIVSPKQYKKRFRK 1700
Query: 1384 AMTSYFLTVPDQWSS 1398
AMTSYFLTVPDQWSS
Sbjct: 1701 AMTSYFLTVPDQWSS 1715
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108341|ref|XP_002314813.1| predicted protein [Populus trichocarpa] gi|222863853|gb|EEF00984.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255570092|ref|XP_002526008.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] gi|223534655|gb|EEF36348.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|359472635|ref|XP_003631178.1| PREDICTED: LOW QUALITY PROTEIN: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297838923|ref|XP_002887343.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297333184|gb|EFH63602.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|42563125|ref|NP_177257.3| 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] gi|5902400|gb|AAD55502.1|AC008148_12 Unknown protein [Arabidopsis thaliana] gi|332197029|gb|AEE35150.1| 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297737713|emb|CBI26914.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|218201185|gb|EEC83612.1| hypothetical protein OsI_29312 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|242081509|ref|XP_002445523.1| hypothetical protein SORBIDRAFT_07g020930 [Sorghum bicolor] gi|241941873|gb|EES15018.1| hypothetical protein SORBIDRAFT_07g020930 [Sorghum bicolor] | Back alignment and taxonomy information |
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| >gi|125603486|gb|EAZ42811.1| hypothetical protein OsJ_27396 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1398 | ||||||
| TAIR|locus:2013965 | 1648 | FAB1C "FORMS APLOID AND BINUCL | 0.559 | 0.474 | 0.607 | 0.0 | |
| TAIR|locus:2091050 | 1791 | FAB1B "FORMS APLOID AND BINUCL | 0.639 | 0.499 | 0.479 | 0.0 | |
| TAIR|locus:2125884 | 1757 | FAB1A "FORMS APLOID AND BINUCL | 0.954 | 0.759 | 0.483 | 3.59999944711e-318 | |
| TAIR|locus:2026109 | 1456 | FAB1D "FORMS APLOID AND BINUCL | 0.557 | 0.535 | 0.340 | 8e-202 | |
| ZFIN|ZDB-GENE-030131-9636 | 2100 | pikfyve "phosphoinositide kina | 0.263 | 0.175 | 0.419 | 2.2e-126 | |
| UNIPROTKB|Q9Y2I7 | 2098 | PIKFYVE "1-phosphatidylinosito | 0.202 | 0.134 | 0.462 | 7e-126 | |
| UNIPROTKB|F1PXC7 | 2100 | PIKFYVE "Uncharacterized prote | 0.202 | 0.134 | 0.462 | 3.9e-125 | |
| UNIPROTKB|F1N2K7 | 2102 | PIKFYVE "Uncharacterized prote | 0.202 | 0.134 | 0.462 | 5.1e-125 | |
| UNIPROTKB|F1SST9 | 2105 | PIKFYVE "Uncharacterized prote | 0.202 | 0.134 | 0.462 | 1.3e-124 | |
| MGI|MGI:1335106 | 2097 | Pikfyve "phosphoinositide kina | 0.202 | 0.134 | 0.459 | 1.4e-124 |
| TAIR|locus:2013965 FAB1C "FORMS APLOID AND BINUCLEATE CELLS 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2435 (862.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 485/799 (60%), Positives = 593/799 (74%)
Query: 2 FXXXXXXXXMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIKLGKEDSEEDWLGI 61
F P +EK E + EPLR VV HFRALV+ELLR E + + S +WL I
Sbjct: 297 FSLSSSFSSHIPTKEKLGENSNEPLRTVVHDHFRALVAELLRGEELSPSDDGSAGEWLDI 356
Query: 62 ITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTS 121
+T +AWQAANFVKPDT GGSMDPG+YVK+KC+A G+ NES I+G+VC+KNI HKRM S
Sbjct: 357 VTALAWQAANFVKPDTRAGGSMDPGNYVKIKCVASGNQNESILIRGIVCSKNITHKRMIS 416
Query: 122 QYRNPRLLILGGALEYQRVPNQLASFNTLLQQQENDHLKMVISKIEALRPNVLLVEKSVS 181
QY+NPR+++L G+LEYQRV QLASFNTLLQQ EN+H+K +I+KIE+LRPNVLLVEKS S
Sbjct: 417 QYKNPRVMLLAGSLEYQRVAGQLASFNTLLQQ-ENEHMKAIIAKIESLRPNVLLVEKSAS 475
Query: 182 SYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEE 241
SYAQ LL KEISLVLNVKR LL+RIARCTGA++ PS+D+IST RLGHCELF+ E+V E+
Sbjct: 476 SYAQQYLLEKEISLVLNVKRSLLDRIARCTGAVLCPSLDSISTARLGHCELFRTERVLEQ 535
Query: 242 HETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLET 301
HE NQ N+KPS+TLMYFEGCPRRLGC V+LRG CREELKKVKHV+QYAVFAAYHLSLET
Sbjct: 536 HEAGNQSNRKPSRTLMYFEGCPRRLGCTVVLRGSCREELKKVKHVIQYAVFAAYHLSLET 595
Query: 302 SFLADEGATLPKMRLKHS---ISKPERMMADNAISAIPSSKVAANYQEVADDSTRDDGSV 358
SFLADEGA+LPK+RLK + +R + D IS I S + Q + + + +D
Sbjct: 596 SFLADEGASLPKIRLKQPGMVRTASQRRIIDEGISLITQSPTETDSQALLETAAHEDEHT 655
Query: 359 SLRLEHGGLESLSEQLNHSSVSSVPLFLDHRYGDGPTDACNDNLEHDVGLDFRSFNECED 418
+ EH ESL E + + + ++ +D N + +++ S N+ D
Sbjct: 656 APMPEHEVCESLCEDFDPTQIFPPSSEVETEQ----SDTLNGDFANNLVTRSYSSNQLND 711
Query: 419 L-KVSIVNSFDALQQELQEIMGQE-------ERQLGESHELMKFEGVNEDEVSGEYFSAA 470
L + ++ S + + Q+ G+E E QL +L + E ED+VS EYFSAA
Sbjct: 712 LHEPTLCLSSEIPETPTQQPSGEEDNGRGEEENQLVNPQDLPQHESFYEDDVSSEYFSAA 771
Query: 471 DTNQSILVSFSSRCVLKGTVCERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSCCRSCNES 530
D++QSILVSFSSRCVLK +VCERSRLLRIKFYGSFDKPLGRYL DLF++TS CRSC E
Sbjct: 772 DSHQSILVSFSSRCVLKESVCERSRLLRIKFYGSFDKPLGRYLKDDLFDKTSSCRSCKEL 831
Query: 531 AEAHVLCYTHQQGNLTISVKCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMS 590
+AHVLCY+HQ GNLTI+V+ L S++LPGE+DGKIWMWHRCLRCAH DGVPPATRRVVMS
Sbjct: 832 VDAHVLCYSHQNGNLTINVRRLPSMKLPGEQDGKIWMWHRCLRCAHVDGVPPATRRVVMS 891
Query: 591 DAAWGLSFGKFLELSFSNHATANRIASCGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVH 650
DAAWGLSFGKFLELSFSNHATANR+ASCGHSLQRDCLR+YGFG+M+A FRYSPI+IL+V
Sbjct: 892 DAAWGLSFGKFLELSFSNHATANRVASCGHSLQRDCLRFYGFGNMVAFFRYSPINILTVL 951
Query: 651 LPPSVLEFNGLLQQEWIRKEAEELKVKMETLYAEISNVLEVMEQRSNSIGCEMSDSTDLK 710
LPPS+LEFN QQEWIR EA EL KM T+Y EIS++L ME++S+ + E S++ DL
Sbjct: 952 LPPSMLEFNSHPQQEWIRTEAAELVGKMRTMYTEISDMLNRMEEKSSLLEPEQSEACDLH 1011
Query: 711 SHILELKVQLESERNDYIGLLQPVVMETSEPGQTAVDILELNRLRRALLIGSHAWDRQLY 770
S I+ L QL E+++Y LQP+ E + Q ++DILELNRLRRAL+IG+HAWD QLY
Sbjct: 1012 SRIIGLIDQLVKEKDEYDDALQPIFEENLQI-QGSLDILELNRLRRALMIGAHAWDHQLY 1070
Query: 771 SLNSLLKKGSIAKAKQGNA 789
LNS LKK S+ K NA
Sbjct: 1071 LLNSQLKKASVFKTGDDNA 1089
|
|
| TAIR|locus:2091050 FAB1B "FORMS APLOID AND BINUCLEATE CELLS 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125884 FAB1A "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2026109 FAB1D "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N2K7 PIKFYVE "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1398 | |||
| cd03334 | 261 | cd03334, Fab1_TCP, TCP-1 like domain of the eukary | 1e-128 | |
| cd00139 | 313 | cd00139, PIPKc, Phosphatidylinositol phosphate kin | 1e-108 | |
| pfam01504 | 255 | pfam01504, PIP5K, Phosphatidylinositol-4-phosphate | 5e-80 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 1e-66 | |
| COG5253 | 612 | COG5253, MSS4, Phosphatidylinositol-4-phosphate 5- | 3e-59 | |
| cd03333 | 209 | cd03333, chaperonin_like, chaperonin_like superfam | 3e-47 | |
| TIGR02344 | 525 | TIGR02344, chap_CCT_gamma, T-complex protein 1, ga | 9e-28 | |
| pfam00118 | 481 | pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami | 9e-24 | |
| cd03343 | 517 | cd03343, cpn60, cpn60 chaperonin family | 5e-18 | |
| cd00309 | 464 | cd00309, chaperonin_type_I_II, chaperonin families | 2e-17 | |
| cd03337 | 480 | cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type | 1e-16 | |
| COG0459 | 524 | COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po | 2e-16 | |
| TIGR02339 | 519 | TIGR02339, thermosome_arch, thermosome, various su | 2e-15 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 2e-13 | |
| TIGR02345 | 523 | TIGR02345, chap_CCT_eta, T-complex protein 1, eta | 1e-09 | |
| cd03339 | 526 | cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty | 6e-09 | |
| TIGR02340 | 536 | TIGR02340, chap_CCT_alpha, T-complex protein 1, al | 2e-08 | |
| cd03335 | 527 | cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type | 3e-08 | |
| cd03342 | 484 | cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type | 1e-07 | |
| cd03340 | 522 | cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I | 1e-07 | |
| TIGR02343 | 532 | TIGR02343, chap_CCT_epsi, T-complex protein 1, eps | 1e-06 | |
| PTZ00212 | 533 | PTZ00212, PTZ00212, T-complex protein 1 subunit be | 2e-05 | |
| TIGR02347 | 531 | TIGR02347, chap_CCT_zeta, T-complex protein 1, zet | 2e-05 | |
| cd03338 | 515 | cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type | 2e-05 | |
| cd03336 | 517 | cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type | 2e-04 | |
| TIGR02341 | 518 | TIGR02341, chap_CCT_beta, T-complex protein 1, bet | 0.003 | |
| TIGR02342 | 517 | TIGR02342, chap_CCT_delta, T-complex protein 1, de | 0.004 |
| >gnl|CDD|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-128
Identities = 150/275 (54%), Positives = 195/275 (70%), Gaps = 15/275 (5%)
Query: 35 RALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCI 94
RAL+++LL+ EGI ++E WL I+ + W+AA+ VKPD G MD YVK+K I
Sbjct: 1 RALLAQLLKDEGIS-----NDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKI 55
Query: 95 AKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASFNTLLQQQ 154
GSP++S + GVV TKN+ HKRM S+ +NPR+L+L G LEYQRV N+L S + ++ Q
Sbjct: 56 PGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVI-LQ 114
Query: 155 ENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGAL 214
E ++LK ++S+I ALRP+V+LVEKSVS AQDLLL I+LVLNVK +LERI+RCTGA
Sbjct: 115 EKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGAD 174
Query: 215 ITPSID-NISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLR 273
I S+D +++ +LG CE F++ EEH SKTLM+FEGCP+ LGC +LLR
Sbjct: 175 IISSMDDLLTSPKLGTCESFRVRTYVEEH--------GRSKTLMFFEGCPKELGCTILLR 226
Query: 274 GKCREELKKVKHVVQYAVFAAYHLSLETSFLADEG 308
G EELKKVK VV++ VFAAYHL LETSFLADE
Sbjct: 227 GGDLEELKKVKRVVEFMVFAAYHLKLETSFLADEF 261
|
Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261 |
| >gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|185514 PTZ00212, PTZ00212, T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233827 TIGR02347, chap_CCT_zeta, T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239452 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|211733 TIGR02341, chap_CCT_beta, T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1398 | |||
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| COG5253 | 612 | MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si | 100.0 | |
| cd00139 | 313 | PIPKc Phosphatidylinositol phosphate kinases (PIPK | 100.0 | |
| smart00330 | 342 | PIPKc Phosphatidylinositol phosphate kinases. | 100.0 | |
| KOG0229 | 420 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| PF01504 | 252 | PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; | 100.0 | |
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 100.0 | |
| cd03334 | 261 | Fab1_TCP TCP-1 like domain of the eukaryotic phosp | 100.0 | |
| TIGR02344 | 525 | chap_CCT_gamma T-complex protein 1, gamma subunit. | 100.0 | |
| TIGR02339 | 519 | thermosome_arch thermosome, various subunits, arch | 100.0 | |
| KOG0364 | 527 | consensus Chaperonin complex component, TCP-1 gamm | 100.0 | |
| cd03339 | 526 | TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha | 100.0 | |
| cd03343 | 517 | cpn60 cpn60 chaperonin family. Chaperonins are inv | 100.0 | |
| KOG0361 | 543 | consensus Chaperonin complex component, TCP-1 eta | 100.0 | |
| PTZ00212 | 533 | T-complex protein 1 subunit beta; Provisional | 100.0 | |
| TIGR02343 | 532 | chap_CCT_epsi T-complex protein 1, epsilon subunit | 100.0 | |
| cd03335 | 527 | TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| cd03340 | 522 | TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero | 100.0 | |
| TIGR02342 | 517 | chap_CCT_delta T-complex protein 1, delta subunit. | 100.0 | |
| cd03336 | 517 | TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| TIGR02347 | 531 | chap_CCT_zeta T-complex protein 1, zeta subunit. M | 100.0 | |
| cd03338 | 515 | TCP1_delta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02340 | 536 | chap_CCT_alpha T-complex protein 1, alpha subunit. | 100.0 | |
| TIGR02345 | 522 | chap_CCT_eta T-complex protein 1, eta subunit. Mem | 100.0 | |
| cd03337 | 480 | TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02341 | 519 | chap_CCT_beta T-complex protein 1, beta subunit. M | 100.0 | |
| KOG0358 | 534 | consensus Chaperonin complex component, TCP-1 delt | 100.0 | |
| TIGR02346 | 531 | chap_CCT_theta T-complex protein 1, theta subunit. | 100.0 | |
| cd03342 | 484 | TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| KOG0363 | 527 | consensus Chaperonin complex component, TCP-1 beta | 100.0 | |
| KOG0360 | 545 | consensus Chaperonin complex component, TCP-1 alph | 100.0 | |
| cd00309 | 464 | chaperonin_type_I_II chaperonin families, type I a | 100.0 | |
| PF00118 | 485 | Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon | 100.0 | |
| cd03341 | 472 | TCP1_theta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| COG0459 | 524 | GroL Chaperonin GroEL (HSP60 family) [Posttranslat | 100.0 | |
| cd03333 | 209 | chaperonin_like chaperonin_like superfamily. Chape | 100.0 | |
| KOG0359 | 520 | consensus Chaperonin complex component, TCP-1 zeta | 100.0 | |
| KOG0362 | 537 | consensus Chaperonin complex component, TCP-1 thet | 100.0 | |
| PRK12849 | 542 | groEL chaperonin GroEL; Reviewed | 99.98 | |
| PRK00013 | 542 | groEL chaperonin GroEL; Reviewed | 99.97 | |
| PTZ00114 | 555 | Heat shock protein 60; Provisional | 99.97 | |
| PRK12851 | 541 | groEL chaperonin GroEL; Reviewed | 99.97 | |
| cd03344 | 520 | GroEL GroEL_like type I chaperonin. Chaperonins ar | 99.97 | |
| TIGR02348 | 524 | GroEL chaperonin GroL. This family consists of Gro | 99.97 | |
| PRK12850 | 544 | groEL chaperonin GroEL; Reviewed | 99.97 | |
| PRK12852 | 545 | groEL chaperonin GroEL; Reviewed | 99.96 | |
| CHL00093 | 529 | groEL chaperonin GroEL | 99.96 | |
| PRK14104 | 546 | chaperonin GroEL; Provisional | 99.96 | |
| PLN03167 | 600 | Chaperonin-60 beta subunit; Provisional | 99.96 | |
| KOG0357 | 400 | consensus Chaperonin complex component, TCP-1 epsi | 99.93 | |
| KOG0356 | 550 | consensus Mitochondrial chaperonin, Cpn60/Hsp60p [ | 97.6 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 96.05 |
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-217 Score=1998.89 Aligned_cols=1262 Identities=50% Similarity=0.789 Sum_probs=948.2
Q ss_pred hhhHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHhCCcccccCChhhHHHHHHHHHHHHHhhcCCCCCCCCCCCccCceE
Q 000604 11 MFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVK 90 (1398)
Q Consensus 11 ell~~a~~l~~~~~~~~~i~~~~~~al~~qLl~~~~i~~~sk~~~~~w~~~ls~l~v~Av~~v~~~~~~~~~~Di~~~Ik 90 (1398)
+.-.+-+...+....+..+..+|+++++.+|++.+.+++..+....+|.++++.|+|+|+..++|+.+.++.||+.+|||
T Consensus 286 ~~~~~~~~~ee~~~~m~~~~~~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVk 365 (1598)
T KOG0230|consen 286 EYKSKDKSAEEDEKVMRNVVESHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVK 365 (1598)
T ss_pred CccccccchhhcchhhhccccchHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceE
Confidence 33333344455667788899999999999999999999988777789999999999999999999998899999999999
Q ss_pred EEEccCCCCCcceeEEeEEEeeccCCCCCcceecCCcEEEEeecccccccccChhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000604 91 VKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASFNTLLQQQENDHLKMVISKIEALR 170 (1398)
Q Consensus 91 Ikki~GG~~~dS~lI~GvV~~K~~a~k~Mp~~i~nprIlll~~~Le~~r~~~~~~sl~~ii~~qE~e~L~~~V~rI~~~g 170 (1398)
||||+||+..||++|+||||+|+++||.|++++++|||+|+.|+|+|+|..+++.++++++. ||++||+.+|+||.+.+
T Consensus 366 vK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlq-qE~e~lk~~varI~s~~ 444 (1598)
T KOG0230|consen 366 VKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQ-QEKEYLKKVVARIESLR 444 (1598)
T ss_pred EEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHh-hHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CCEEEecCCCcHHHHHHHHHcCcEEEEccChHHHHHHHHHhCCeEccccccCCCCCcceeeeEEEEEeccccccccccCC
Q 000604 171 PNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNK 250 (1398)
Q Consensus 171 pnVVlvek~Vs~~A~~~L~~~gI~vv~~Vk~~~LerIar~TGA~Ii~sid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~~ 250 (1398)
|||++|+|+|+++|+++|...||+++.|||+..|+||||||||+|++++|.++.++||+|+.|+++++.++|
T Consensus 445 p~vllVeksVS~~aqe~L~~k~I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~h-------- 516 (1598)
T KOG0230|consen 445 PDVLLVEKSVSRIAQELLLDKGISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEH-------- 516 (1598)
T ss_pred CCeEEEechHHHHHHHHhhccCeEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCceEEEEEcCCCCceeEEEeccCCHHHHHHHHHHHHHHHHHHHHhhccCeeeeCCCcccccccccCCC-Ccccccccc
Q 000604 251 KPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLKHSI-SKPERMMAD 329 (1398)
Q Consensus 251 ~~~Kt~i~f~gc~~~~g~TIlLRG~s~~~L~evkr~l~dal~v~~~~~le~~~l~ggGa~e~~~~~~~~~-~~~~~~~~~ 329 (1398)
+..||+|||+||+.++||||+|||++...|.+||++++++++++|++.+|.+|++|.||........... ..+. ...
T Consensus 517 k~sKTlmffegc~~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~~~~~~~~~--~~~ 594 (1598)
T KOG0230|consen 517 KPSKTLMFFEGCPKPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLSIPTSVETS--IIN 594 (1598)
T ss_pred cchhhhHHhhcCCCCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccccccccccceeccc--ccc
Confidence 5679999999999999999999999999999999999999999999999999999999998754333221 1111 334
Q ss_pred cccccCCCccccccccccccCCCCCCCccccccccCccccccccccCCCccccccccC---Cc---CCCCCCCc----cC
Q 000604 330 NAISAIPSSKVAANYQEVADDSTRDDGSVSLRLEHGGLESLSEQLNHSSVSSVPLFLD---HR---YGDGPTDA----CN 399 (1398)
Q Consensus 330 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~l~~~---~~---~~~~~~~~----~~ 399 (1398)
++++++|+++..+.+.+.......+..+.+.....+ -++++|+..++++.. +. ++...... ..
T Consensus 595 ~~~s~~~~~t~st~~~a~~~~~~~e~~~~~~~~~~~-------~ls~sp~~~~~~~~~~i~P~~~~~e~~~~~~~~~~~~ 667 (1598)
T KOG0230|consen 595 RSISTSPGETDSTAEKAPVEALQVEPNRFNGALSSE-------LLSSSPFLEFPLDLLEIAPGELVIETRLSSYSKGPKQ 667 (1598)
T ss_pred cccccCCCCCcchhcccchhhhccchhhhhcccccc-------eeecccccccCCCccccCCccceeecchhhhcCchhh
Confidence 566667766554433332211112222233222211 234556544444322 00 10000000 00
Q ss_pred CcCccccc---ccccc-ccccc-cccccccccchhhhHHHHHHHhhhhhhccc---cchhhccc--CccccccccccCCC
Q 000604 400 DNLEHDVG---LDFRS-FNECE-DLKVSIVNSFDALQQELQEIMGQEERQLGE---SHELMKFE--GVNEDEVSGEYFSA 469 (1398)
Q Consensus 400 ~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~ 469 (1398)
..+..... ..+.+ ...++ ......-..+. . ........ ..+.+... ..++.+ ...+.++
T Consensus 668 ~~lv~~~es~~~~~~~s~~~~~~~l~e~~~~~~~---------~-~~~k~~~~~~~~~~~~~~~~~~~~e~~-~s~~~~~ 736 (1598)
T KOG0230|consen 668 NGLVPAHESVLNDLHESTLSILSKLPETRSGTHE---------G-NEDKGPGLEPELANNQNIQRPEETEEQ-SSKDALD 736 (1598)
T ss_pred ccccccccccccccccccccccccccchhcccch---------h-ccccCccccccccccccccchhhhhhh-hcccCCC
Confidence 00110000 00000 00000 00000000000 0 00000000 00000000 111111 4556789
Q ss_pred cCCCceEEEEEeeeecCCCCccCCCeEEEEeecCCCCCchHHHHHHhhccCCCCCCCCchhhhcccceeeecCcEEEEEE
Q 000604 470 ADTNQSILVSFSSRCVLKGTVCERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSCCRSCNESAEAHVLCYTHQQGNLTISV 549 (1398)
Q Consensus 470 p~~HQ~I~vL~S~~~~~~~~~C~~P~~v~i~fY~~nD~tLGqFLe~~c~~~~~~C~sC~~pm~~H~r~yvH~~g~i~I~v 549 (1398)
|.+||+|+||||++|...+.+|++||++.|+|||++|++||+||+++||++.|.|++|++||++|+|+|||++||++|.|
T Consensus 737 ~~~HQsilVl~ss~~~~k~~~C~r~~l~~ikyy~~~D~~lg~fL~~~~f~~~~~C~sC~~~~laHv~~yvh~~g~l~I~v 816 (1598)
T KOG0230|consen 737 PSSHQSILVLFSSRSVLKGSVCERPHLLRIKYYGSFDKPLGRFLRDYLFDQRYMCPSCNEPMLAHVRCYVHGNGSLTISV 816 (1598)
T ss_pred ccccceeEEEEeeeeeccCCccccccEEEEEeeccccchHhHHHHHHHhcccccCccccchHHHHHHHHhhccCceEEEe
Confidence 99999999999999997778899999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCcCCCCCCCCcEEEEeccccCCCCCCCCCCcceEecccccccccHHHHHHHhccCccccCccCCCCCccccceeee
Q 000604 550 KCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRIASCGHSLQRDCLRY 629 (1398)
Q Consensus 550 e~~~~~~lp~~~~~~I~mWs~C~~C~~~~~~~~~Tp~v~mS~~tw~~SFgKfLEL~F~~~~~~~~~~~C~H~~~rDhvry 629 (1398)
++++.. +||+++++||||+||.+|++. ||+|++|+||+++|++|||||||++||+|++..|+..|+|++||||+||
T Consensus 817 ~~~~e~-l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~Sdaaw~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~f 892 (1598)
T KOG0230|consen 817 KKLPEL-LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLHRDCLRF 892 (1598)
T ss_pred eccccc-cccccCceEEEEeccccCCCC---CCCcceeEcchhhHhhhHHHHHHhhhccccccccccCCcchhhhhhhhh
Confidence 999865 999999999999999999974 7899999999999999999999999999999999999999999999999
Q ss_pred cccCCeEEEEEeeeeeeeEEecCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCchhH
Q 000604 630 YGFGSMIAIFRYSPIDILSVHLPPSVLEFNGLLQQEWIRKEAEELKVKMETLYAEISNVLEVMEQRSNSIGCEMSDSTDL 709 (1398)
Q Consensus 630 F~~~~~v~~f~y~~I~v~ev~~P~~~i~~~~~~~~~~~~~e~~~i~~k~~~~~~~v~~~L~~i~~~~~~~~~~~~~~~~~ 709 (1398)
|||++|||+|+|++|++|+|.+||.++.|+ +.+++|+.+|.++++.||+.+|++|.++|.+|+.+. + -
T Consensus 893 fgf~~mva~f~ys~i~v~~v~lpp~~l~~~-~~~~~~~~~e~k~v~~k~~~~~n~v~~~l~~i~~~~-------~----~ 960 (1598)
T KOG0230|consen 893 FGFGNMVACFRYSPIEVYEVDLPPSKLEFN-HIQQEWLQEEIKEVIEKGEELYNEVLERLSRIAEKD-------E----N 960 (1598)
T ss_pred cccCCceeeeeeccceeEEEeCChhhcccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------c----c
Confidence 999999999999999999999999999999 888999999999999999999999999999998651 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCCCchhhhHHHHHHHHHHHHhhhhhhHHHHHHHhhhhcCcccccccCCc
Q 000604 710 KSHILELKVQLESERNDYIGLLQPVVMETSEPGQTAVDILELNRLRRALLIGSHAWDRQLYSLNSLLKKGSIAKAKQGNA 789 (1398)
Q Consensus 710 ~~~~~el~~~l~~e~~~~~~~l~~~~~~~~~~~~~~~~~l~ln~~~r~l~~~~~~Wd~~~~~~~~~~~~~~~~~~~~~~~ 789 (1398)
+..+.+|+.++.+|+..|++.++.++.....-+++.+|++.+|+.||+|...++.|+.+++.+...+| . .+..|...
T Consensus 961 ~~~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l~l~~~rr~l~~~s~~w~~~l~s~~~~~k-~--~~~~~~~~ 1037 (1598)
T KOG0230|consen 961 RPLIQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDILALNRDRRALLASSYLWDERLISLSKSLK-L--ESSKDTKP 1037 (1598)
T ss_pred cchhhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHHHHHHHHHHHHhhhccccccchhhhhhhc-c--cccccccc
Confidence 55688999999999999999999999977767888899999999999999999999999998776554 1 11111000
Q ss_pred hhhhhhhhcccccccC------CC--CCCCCcCCccC-CCCCCCCccccccccccccccCCCCCCCCCCCCcccccccc-
Q 000604 790 SYAQLKELRTDLFCKD------SK--LDHDNEENVSG-SLDSLESPANDLHLQQKEELNLPTLEPFGSENSKLTSFLHN- 859 (1398)
Q Consensus 790 ~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e- 859 (1398)
... ++..+...+-. .. ...|++...+. ....+.. ...+++. ++. .....+....+.....+
T Consensus 1038 ~~~--~~~~~~~~~r~p~~~k~~~~~~~~~~~~s~~~~~~~~~lp----~~~~s~~--~d~-~~~~~~~~~~~~~s~~~~ 1108 (1598)
T KOG0230|consen 1038 KES--ETNSTAKRKRSPEPQKGVDEDSFLTDSSSDVSSLEHLNLP----LPEDSNS--TDT-GLSGPSEVLEDNESIDEM 1108 (1598)
T ss_pred ccc--cccCccccccCchhhccccccccccccccccCccccccCC----CCCcccc--cch-hccCcccccccccchhhc
Confidence 000 00000000000 00 00111110000 0000000 0000000 000 00000000000000000
Q ss_pred --cccccCCCc-cccccchhhccccccCCCCCCcccccCCCCCCCcccccccCCCCcccccCCCcccccchhhhHHHHHh
Q 000604 860 --REEDVHSDG-EITSTLSEKIDSAWTGTDQVVPLVSQTDRPQAGFVGQISKIDNSPFKRLASPVRVHSFDSALRFQERI 936 (1398)
Q Consensus 860 --~~~~~~s~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~er~ 936 (1398)
.+....+.. .....+.+.++++|.|....+.. .|..... .
T Consensus 1109 ~~~v~n~~s~~~~~~~~~~~~l~~~~~g~r~~~~~---------------------------~P~s~~~----------~ 1151 (1598)
T KOG0230|consen 1109 LGSVRNTYSLANKVRKILKQILDSATIGNRANPKS---------------------------SPFSGQD----------H 1151 (1598)
T ss_pred ccccccccchhhHHHHHHHHhcccccccccccCCC---------------------------CCCchhh----------h
Confidence 000000000 01112233333444333221100 0000000 0
Q ss_pred hcCCCCCcccccccccccCCC-cccccccCCchhhHH-hhhhcCchhHhhhhhcccCCCccccc--ccccccCccccccC
Q 000604 937 ARGLPHSLLHLSSIRSFHASG-DYRSMVRDPVSNVMR-TYSQILPLEAQKLNLILSSTPSFISS--ASRMVEGARLLLPQ 1012 (1398)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-~~~~~~~~~~~k~~~~~~~~p~~~s~--~~~~~~~~~l~~P~ 1012 (1398)
..+++..+. .++..+ +.+.|++.|+.+++. ..........++........|.+++. ......+++|++|
T Consensus 1152 ~~~~~~~~~------~~~~~e~~~~~~~e~~~~~~~~~~~~~e~~lns~~~~~~~~~~~k~~~s~~~s~~~~~~rLl~p- 1224 (1598)
T KOG0230|consen 1152 STDLPLESN------PIHVLEKELSSWIEDPLTNMYYREATKELSLNSQKNSAETKEPPKYPSSESESEPESSSRLLLP- 1224 (1598)
T ss_pred ccccccccC------CccccccccHHHHhhhhhhHhHHHHHHHHHhhcchhhcccccCCcCcccccccccccccceecc-
Confidence 001110000 111112 456788888888765 33333333334444445556666665 3344778899999
Q ss_pred CCCCCceEEeeCCCchhhhhhhcCChhHHHHHHhhcccCCCCCCccccccCCCccc-cccccccCCCCcccccc-cCCCC
Q 000604 1013 RGDNDVVIAVFDDDPTSIISYALSSKEYEDWVADKLYDNDGSWSAGEIHKEGSAVS-SFSAWQSFGSLDLDYIH-YGSYG 1090 (1398)
Q Consensus 1013 ~~~~d~~v~V~EdEPSSiIA~aLsS~dY~~~l~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~d~~~~~-~~s~~ 1090 (1398)
.+.+|.+|+||||||+|+|||||++++|..+..+. ....+ ..++.. ...+..... ....+
T Consensus 1225 ~~~ndl~vp~~edpp~s~ia~al~s~~~~~q~~~p----------------~~sis~~~S~~~--~~~s~~~e~~~~~~~ 1286 (1598)
T KOG0230|consen 1225 LGLNDLVVPVYEDPPPSLIAYALSSKERINQESSP----------------GLSISFSLSNLQ--GRLSKISEFDDTKSE 1286 (1598)
T ss_pred ccCCcccCCcccCCCchhhhhhhcchhhccCCCCC----------------Cccccccccccc--cchhhhhhhhhhhhc
Confidence 88999999999999999999999997776433210 00000 000000 000000000 00000
Q ss_pred CCCCC------CCCCCcCCCC--CCCCceEEEEcCCCCCCCcceeEEEEEcCHHHHHHHHHHcCCChHHHHHHhccCccC
Q 000604 1091 SEDAS------SSVGTLFTDP--KKSPHLTISFGDESSTAGGKVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRKW 1162 (1398)
Q Consensus 1091 ~~~~~------~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~y~p~~F~~LR~~~~~~~~~~~~SL~~~~~~ 1162 (1398)
+.+.+ ..+.+..+.+ ....|++++|+++.. +|+|++|||++|++||+.||.++++||+||+||.+|
T Consensus 1287 sl~~s~l~~s~~~~~e~l~~~~~~~~~h~~~~f~egk~------k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W 1360 (1598)
T KOG0230|consen 1287 SLDNSGLESSSYRRGENLQKSKLETRTHLEYQFSEGKA------KYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKW 1360 (1598)
T ss_pred cccccccchhhhcchhhccccccccccceeeeccCCce------EEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCccc
Confidence 00000 0011111223 667999999998865 999999999999999999999999999999999999
Q ss_pred ccCCCCcceeEEeeccCceEecccCHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhheeeeEEEEeeecCCCeeEEEEEE
Q 000604 1163 SAQGGKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFKYLTDSLNSRSPTCLAKILGIYQVSVKHLKGGKETKIDLM 1242 (1398)
Q Consensus 1163 ~~~gGKSgs~F~~T~D~rfiiK~is~~E~~~f~~~lp~Yf~y~~~~~~~~~~tlL~ki~G~y~i~~~~~~~g~~~~~~~i 1242 (1398)
.++||||||+|++|.|+|||||+|++.|+++|++|||+||+||.++++++.||+||||||+|||.+|++++|++.|++++
T Consensus 1361 ~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~Dvm 1440 (1598)
T KOG0230|consen 1361 EAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVM 1440 (1598)
T ss_pred ccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccCCCCceeEeeCCCcccccccCCCCCCcccccchhhhhhccCCccccChHHHHHHHHHHHhcccccccCCcccCc
Q 000604 1243 VMENLFFRRSISRVYDLKGSARSRYNTDTTGTNKVLLDMNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLASVDVMDYS 1322 (1398)
Q Consensus 1243 VMeNlf~~~~i~~~yDLKGS~~~R~~~~~~~~~~vl~D~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~~imDYS 1322 (1398)
|||||||+++++|+||||||+|||+++.+++.+.||+|+||+++++++||||++++|+.|.++|||||.||+++||||||
T Consensus 1441 VMENLfY~r~vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYS 1520 (1598)
T KOG0230|consen 1441 VMENLFYGRKVSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYS 1520 (1598)
T ss_pred eehhhhhccccceeeeccchhhhccCCCCCCCceEEecHHHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecccceeeEeeeecccccchhhhHhHHhhhhcccCCCCCCCCcccChhHHHHHHHHHHHhccccCCCCCCC
Q 000604 1323 LLVGVDEERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIISPKQYKKRFRKAMTSYFLTVPDQWSS 1398 (1398)
Q Consensus 1323 LLvgi~~~~~~~~~GIID~L~~yt~~KklE~~~K~~~~~gg~~~~~~T~v~P~~Y~~RF~~~m~~~f~~~p~~W~~ 1398 (1398)
||||||++++|||+||||||||||||||||+|||..| +||+++..||||+|++|++||++||++||++|||+|++
T Consensus 1521 LLVGvD~e~~ELvlGIIDfiRtYTWDKkLESWVK~sG-l~gpk~~~PTVVSP~qYK~RFRkAMd~YfL~VPD~Wtg 1595 (1598)
T KOG0230|consen 1521 LLVGVDDENNELVLGIIDFIRTYTWDKKLESWVKSSG-LGGPKNKQPTVVSPEQYKTRFRKAMDTYFLMVPDQWTG 1595 (1598)
T ss_pred eEEEeeCCCCeEEEEehHhhhhhhhhhhhhhheeccc-cccCCCCCCceeCHHHHHHHHHHHHhheeeecCCcccC
Confidence 9999999999999999999999999999999999999 67889999999999999999999999999999999985
|
|
| >COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >smart00330 PIPKc Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in [] | Back alignment and domain information |
|---|
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
| >TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02339 thermosome_arch thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >cd03343 cpn60 cpn60 chaperonin family | Back alignment and domain information |
|---|
| >KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PTZ00212 T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit | Back alignment and domain information |
|---|
| >cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00309 chaperonin_type_I_II chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism | Back alignment and domain information |
|---|
| >cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit | Back alignment and domain information |
|---|
| >COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03333 chaperonin_like chaperonin_like superfamily | Back alignment and domain information |
|---|
| >KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK12849 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK00013 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PTZ00114 Heat shock protein 60; Provisional | Back alignment and domain information |
|---|
| >PRK12851 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >cd03344 GroEL GroEL_like type I chaperonin | Back alignment and domain information |
|---|
| >TIGR02348 GroEL chaperonin GroL | Back alignment and domain information |
|---|
| >PRK12850 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12852 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >CHL00093 groEL chaperonin GroEL | Back alignment and domain information |
|---|
| >PRK14104 chaperonin GroEL; Provisional | Back alignment and domain information |
|---|
| >PLN03167 Chaperonin-60 beta subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1398 | ||||
| 3iyg_G | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 4e-21 | ||
| 3p9d_C | 590 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 3e-18 | ||
| 1q3r_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 6e-16 | ||
| 1q3s_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 8e-16 | ||
| 1q2v_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 8e-16 | ||
| 3ko1_A | 553 | Cystal Structure Of Thermosome From Acidianus Tengc | 2e-14 | ||
| 1a6d_A | 545 | Thermosome From T. Acidophilum Length = 545 | 2e-14 | ||
| 2gk9_A | 392 | Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty | 2e-14 | ||
| 2ybx_A | 394 | Crystal Structure Of Human Phosphatidylinositol-5-P | 1e-13 | ||
| 1bo1_A | 416 | Phosphatidylinositol Phosphate Kinase Type Ii Beta | 2e-13 | ||
| 1gml_A | 178 | Crystal Structure Of The Mouse Cct Gamma Apical Dom | 2e-13 | ||
| 1a6d_B | 543 | Thermosome From T. Acidophilum Length = 543 | 2e-12 | ||
| 3izh_A | 513 | Mm-Cpn D386a With Atp Length = 513 | 2e-10 | ||
| 3aq1_B | 500 | Open State Monomer Of A Group Ii Chaperonin From Me | 2e-10 | ||
| 3los_A | 543 | Atomic Model Of Mm-Cpn In The Closed State Length = | 2e-10 | ||
| 3rus_A | 543 | Crystal Structure Of Cpn-Rls In Complex With Adp Fr | 3e-10 | ||
| 3izi_A | 513 | Mm-Cpn Rls With Atp Length = 513 | 4e-10 | ||
| 1ass_A | 159 | Apical Domain Of The Chaperonin From Thermoplasma A | 2e-09 | ||
| 1e0r_B | 159 | Beta-Apical Domain Of Thermosome Length = 159 | 6e-09 | ||
| 3j02_A | 491 | Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun | 7e-09 | ||
| 3iyf_A | 521 | Atomic Model Of The Lidless Mm-Cpn In The Open Stat | 1e-08 | ||
| 3izn_A | 491 | Mm-Cpn Deltalid With Atp Length = 491 | 1e-08 | ||
| 3p9d_F | 546 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 1e-08 | ||
| 3izk_A | 491 | Mm-Cpn Rls Deltalid With Atp Length = 491 | 2e-08 | ||
| 3p9d_G | 550 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 6e-07 | ||
| 3iyg_E | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 9e-06 | ||
| 3iyg_H | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 2e-05 | ||
| 3p9d_B | 527 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 3e-04 |
| >pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
|
| >pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 590 | Back alignment and structure |
| >pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 | Back alignment and structure |
| >pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 | Back alignment and structure |
| >pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 | Back alignment and structure |
| >pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 | Back alignment and structure |
| >pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 | Back alignment and structure |
| >pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 | Back alignment and structure |
| >pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394 | Back alignment and structure |
| >pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416 | Back alignment and structure |
| >pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain (Triclinic) Length = 178 | Back alignment and structure |
| >pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 | Back alignment and structure |
| >pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 | Back alignment and structure |
| >pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 | Back alignment and structure |
| >pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 | Back alignment and structure |
| >pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 | Back alignment and structure |
| >pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 | Back alignment and structure |
| >pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma Acidophilum Length = 159 | Back alignment and structure |
| >pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome Length = 159 | Back alignment and structure |
| >pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 | Back alignment and structure |
| >pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 | Back alignment and structure |
| >pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 546 | Back alignment and structure |
| >pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 550 | Back alignment and structure |
| >pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 527 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 1e-48
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 1102 FTDPKKSPHLTISFGDESSTAGGKVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRK 1161
F K F E+ + F Y F +LR++ DF SL+RS
Sbjct: 55 FKAYSKIKVDNHLFNKENMPS----HFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAP 110
Query: 1162 WSAQ-GGKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFKYLTDSLNSRSPTCLAKI 1220
+S F S D+R+IIK + ++ +Y +Y+ + T L +
Sbjct: 111 LPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVEC---HGITLLPQF 167
Query: 1221 LGIYQVSVKHLKGGKETKIDLMVMENLFF-RRSISRVYDLKGSARSRYNTDTTGTNKVLL 1279
LG+Y+++V +I ++V N+F R S+ R YDLKGS +R +D ++
Sbjct: 168 LGMYRLNVDG------VEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPT 221
Query: 1280 DMNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLASVDVMDYSLLVGVDEERK 1332
+ + +++ K+ + D FLA + +MDYSLLVG+ + +
Sbjct: 222 LKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVER 274
|
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Length = 178 | Back alignment and structure |
|---|
| >3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 | Back alignment and structure |
|---|
| >3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 | Back alignment and structure |
|---|
| >3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 | Back alignment and structure |
|---|
| >3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 | Back alignment and structure |
|---|
| >1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 | Back alignment and structure |
|---|
| >3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 | Back alignment and structure |
|---|
| >1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 | Back alignment and structure |
|---|
| >3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 | Back alignment and structure |
|---|
| >3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 | Back alignment and structure |
|---|
| >3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 | Back alignment and structure |
|---|
| >3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 | Back alignment and structure |
|---|
| >3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 | Back alignment and structure |
|---|
| >3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 | Back alignment and structure |
|---|
| >1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Length = 159 | Back alignment and structure |
|---|
| >3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 | Back alignment and structure |
|---|
| >3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 | Back alignment and structure |
|---|
| >3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 | Back alignment and structure |
|---|
| >3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 | Back alignment and structure |
|---|
| >3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 | Back alignment and structure |
|---|
| >3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1398 | ||||
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 4e-48 | |
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 3e-12 | |
| d1q3qa2 | 153 | c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon | 1e-30 | |
| d1gmla_ | 168 | c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musc | 2e-30 | |
| d1a6db2 | 152 | c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon | 5e-29 | |
| d1assa_ | 152 | c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermo | 1e-27 | |
| d1q3qa3 | 107 | d.56.1.2 (A:146-216,A:370-405) Thermosome, I domai | 2e-08 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (443), Expect = 4e-48
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 1102 FTDPKKSPHLTISFGDESSTAGGKVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRK 1161
F K F E+ + +F Y F +LR++ D+ S++RS
Sbjct: 38 FKAYSKIKVDNHLFNKENLPS----RFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAP 93
Query: 1162 WSAQG-GKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFKYLTDSLNSRSPTCLAKI 1220
++ G+ F + D RF+IK V ++ +Y +++ T L +
Sbjct: 94 INSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIV---ECHGNTLLPQF 150
Query: 1221 LGIYQVSVKHLKGGKETKIDLMVMENLFFRR-SISRVYDLKGSARSRYNTDTTGTNK--V 1277
LG+Y+++V + ++V N+F R ++ R YDLKGS +R +D
Sbjct: 151 LGMYRLTVDG------VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPT 204
Query: 1278 LLDMNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLASVDVMDYSLLVGVDE 1329
D + L + L +G ++K++ + D FLA + +MDYSLLVG+ +
Sbjct: 205 FKDNDFLN--EGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHD 254
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 153 | Back information, alignment and structure |
|---|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Length = 168 | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 107 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1398 | |||
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1gmla_ | 168 | Thermosome, A-domain {Mouse (Mus musculus), gamma | 100.0 | |
| d1q3qa2 | 153 | Thermosome, A-domain {Archaeon Thermococcus sp. ks | 99.97 | |
| d1assa_ | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1a6db2 | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1q3qa3 | 107 | Thermosome, I domain {Archaeon Thermococcus sp. ks | 99.25 | |
| d1a6da3 | 105 | Thermosome, I domain {Archaeon Thermoplasma acidop | 99.16 | |
| d1a6db3 | 107 | Thermosome, I domain {Archaeon Thermoplasma acidop | 99.09 | |
| d1kida_ | 193 | GroEL, A domain {Escherichia coli [TaxId: 562]} | 97.48 | |
| d1srva_ | 145 | GroEL, A domain {Thermus thermophilus [TaxId: 274] | 97.13 | |
| d1ioka2 | 176 | GroEL, A domain {Paracoccus denitrificans [TaxId: | 96.87 | |
| d1sjpa2 | 184 | GroEL, A domain {Mycobacterium tuberculosis, GroEL | 96.78 | |
| d1w2fa_ | 276 | Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {H | 89.48 | |
| d1a6db1 | 243 | Thermosome, E domain {Archaeon Thermoplasma acidop | 89.19 | |
| d1q3qa1 | 258 | Thermosome, E domain {Archaeon Thermococcus sp. ks | 87.16 | |
| d1a6da1 | 245 | Thermosome, E domain {Archaeon Thermoplasma acidop | 85.67 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=532.87 Aligned_cols=252 Identities=27% Similarity=0.521 Sum_probs=226.4
Q ss_pred CEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC-CCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 1239999828999999998709995889997314766756-999741148763167267412499999999998799999
Q 000604 1125 KVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRKWSA-QGGKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFK 1203 (1398)
Q Consensus 1125 ~~~~~~~~y~p~~F~~LR~~~~~~~~~~~~Sl~~~~~~~~-~gGKSgs~F~~T~D~rfiiK~is~~E~~~f~~~lp~Yf~ 1203 (1398)
...|+|++|+|.+|++||++||+++++|+.||+++..|.. ++|||||+||+|.|+|||||||++.|+++|+++||.||+
T Consensus 57 ~~~fkfk~Y~P~vF~~lR~~fgi~~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~ 136 (383)
T d1bo1a_ 57 PSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQ 136 (383)
T ss_dssp CSEEEEEEECHHHHHHHHHHTTCCHHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 88707998379999999998198989999972788654345657767867880699689998579999999999899999
Q ss_pred HHHHCCCCCCCCHHHHEEEEEEEEEEECCCCEEEEEEEEEEECCCCC-CCCEEEEECCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 99850799999404410006798764047980589999975124689-8702676277854445567988--98532341
Q 000604 1204 YLTDSLNSRSPTCLAKILGIYQVSVKHLKGGKETKIDLMVMENLFFR-RSISRVYDLKGSARSRYNTDTT--GTNKVLLD 1280 (1398)
Q Consensus 1204 y~~~~~~~~~~tlL~ki~G~y~i~~~~~~~g~~~~~~~iVMeNlf~~-~~i~~~yDLKGS~~~R~~~~~~--~~~~vl~D 1280 (1398)
|+.++ +++|||+||||+|+|+++ | .+.|||||+|+|++ ..|+++||||||+++|.+.+.+ ....||||
T Consensus 137 h~~~~---n~~TLL~k~~Gly~i~~~----~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD 207 (383)
T d1bo1a_ 137 FIVEC---HGNTLLPQFLGMYRLTVD----G--VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD 207 (383)
T ss_dssp HHHTT---TTCCSSCCEEEEEEEEET----T--EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECH
T ss_pred HHHHC---CCCCCHHHHHEEEEEEEC----C--CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99860---787578763430378747----9--52799998424567765103676158632567675334555204656
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC-------------------------------
Q ss_conf 2252100498510295789999999984030223588545741266533-------------------------------
Q 000604 1281 MNLLENLRTEPLFLGSKAKRSLERAIWNDTSFLASVDVMDYSLLVGVDE------------------------------- 1329 (1398)
Q Consensus 1281 ~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~~imDYSLLvgi~~------------------------------- 1329 (1398)
+||++. +.+|+|+++.|..|++||++||.||+++||||||||||||.
T Consensus 208 ~df~~~--~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (383)
T d1bo1a_ 208 NDFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLC 285 (383)
T ss_dssp HHHHHT--TCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC------------
T ss_pred HHHHHC--CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 778764--688230799999999999999999987786750436755122111122110011245554445555643223
Q ss_pred ----------------------------------------CCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf ----------------------------------------5440567644100134102467677653022489999997
Q 000604 1330 ----------------------------------------ERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASP 1369 (1398)
Q Consensus 1330 ----------------------------------------~~~~~~~GIID~l~~yt~~KklE~~~K~~~~l~g~~~~~~ 1369 (1398)
++..||+|||||||+|||+||+||++|+. ..++ +.++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl--~~~~-g~~I 362 (383)
T d1bo1a_ 286 SYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTV--KHGA-GAEI 362 (383)
T ss_dssp -----------------------CCSCCTTTSTTEEECSSTTEEEEEEECCSCC--------------------C-CCSS
T ss_pred CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH--CCCC-CCCC
T ss_conf 457897883022215533466445777654454456789975999999997157796899999999992--1188-9896
Q ss_pred CCCCHHHHHHHHHHHHHHCCC
Q ss_conf 413936799999999973045
Q 000604 1370 TIISPKQYKKRFRKAMTSYFL 1390 (1398)
Q Consensus 1370 T~v~P~~Y~~RF~~~m~~~f~ 1390 (1398)
|||+|++|++||++||+++|.
T Consensus 363 S~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 363 STVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp SCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHHHCC
T ss_conf 127989999999999998649
|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
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| >d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
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| >d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
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