Citrus Sinensis ID: 000613

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390-
MARFHSHPHHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPPPPPPHPPSVSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGRIKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELGSGSGNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
cccEEcccccHHHHHHHHHHHHHHHccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccEEEEcccEEEEEcccEEEcccccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEEcccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccEEEEEEcEEEEEEEEEEEccccccccccccccccEEEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEccccEEEEEcccccccccccccccEEEEEcccEEEEEccccccccccccccccccccccEEEEEEcEEEEEEEccccEEEEEEEEEEEccEEEEccccccccHHEEEHHHHcccccEEEEccEEHHHHHEEEEEccEEEEcccccEEEEEccEEEEcEEEEEEccEEEEcccEEEEEcEEEEEccccccEEEcEEEEEEEEEEEEccccEEEEcccccccccccccEEEcccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccEEEEcccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccccEEEEEEEEEEccccEEEEEccccccccccccccccEEEEEEccccccccccccccccEEEEEcccccccccccccccEEEccccccccccccccccccccEEccccccccccccccccccccccEEEEEcccccccccccEEccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccccHHHHHHHHHHcccccccccccEEEEEEEcccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccEEEEEccccEEEEEEEEEccccccccccccccccccEEEEEcccccccccEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccEEEEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHccccccccccccccccccccccccccccHHEEHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEcc
cccEcccccHHHHHHHHHHHHHHHHHcccEEEEccccccEEEEEcccccccccccccccccccccccccccHHHccccccccEEEEEEEEEEEcccEEEEEcEEEEEcccEEEEEccccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccEEEEccccccccccccccccccccccccccccccEEEEcccccccccccccEEEHHcccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEcccccccccccccccEEEEEEEEEEccEEEEEccccccccccccEEEEEEEEcccccEEEEEccccccccccccccccEEcccccEEEEEccccccccccccccccccccccEEEEEcccEEEEEEEEEEEEEEEEEEEEcccEEEEcccccccHHHHHHHHHHHHcccHEEHHHHHHHHHHHHHHcccEEEEcccccEEEEEEEEEEcEEEEEEcccEEEccccccEccccEEEccccccHHHHHEEEEHHEEEEEEccccEEEccccccccccccccEccccccccHHHccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEEcccccccccccccEcccccccccccccccccEEEcccEEcccccccccccccEcccccccccccccccccEEEEEcccccccccEEEEEEEEEccccccccccccccEEccccccccccccHHHHHHHHHHHHcccccEEccccccEEEcccccccccEEEEEEccccccccEEEEEEEEEEEEEccccccccccccccccEcccccccccccEEEEccccccEEccccccHHHcccccccHccccEEEEEEcccccccccccEEccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHcccccHcccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHccEEcccccHEEEEHHHHcccccccccccHHHHccccEEEEEEccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHccEEEEEHEEHHHHccHHEEEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccEEccHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
marfhshphhysLHFAFLFTLFIfftnpnfvlsstyhddfsiidfdsnlfhqdysppspppppphppsvsctddldgigtldstCQIVNdlnltrdvyicgkgnfeiltgvkfhcpisgcsIAVNIsgnftlgvnssivSGTFELVAQNASflngsvvnttglagapppqtsgtpqgieggggghggrgacclvdesklpedvwggdayswsslqkpwsygsrggttsqefdyggggggrIKMVIDEYVvldgsisadggdgghkggggsggSIYLIAYKMTGsglisacggngyagggggrVSVDIfsrhdepkifvhggnsfacpdnaggagtlydavprtltvsnynmstdTETLllefpnqplwtnvyvqncaratVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEmlvdgggdATVATSLLEASNLIVLKEFSIIHSNANLEVHGQgllnlsgpgdrIEAQRLVLALFYSIhvgpgsvlrsplenattdavtprlyceiqdcpvellhppedcnvnsslsFTLQICRVEDIVVDGLVEGSVVHFHRARtisvqssgaisasgmgctggvgrgkvigngvgsggghggkgglgcfndscveggisygnanlpcelgsgsgndtsgnstagggiivmgsfehplsslsvegsvkadgqsfedlstkknyvvrngsiggagggsgGTILLFLHTldigdsavlssvggygshmggggggggrihfhwsdiptgdvyqpiasvrgsiriggglgghelgggengtttgkacpkglygifceecpvgtyknvtgsdkslchqcppqefphraVYISVrggiaetpcpyrciseryhmphcYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKfvgvdelpgpaptqhgsqidhsfpfLESLNEVLEtnraeeshshvhrmyfmgpntfsqpwhlphtppeqIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYeglkvaatPDLMLAYLDFFlggdekrtdlppclhhrfpmslifggdgsymapfslqnDNILTSLmsqlvpptICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLEthanptlqlhglRVDLAWFQATACGYCQYGLLVYAvggeneptsigsfdrgrlieresrvksidmenpsgrlreETLLTRAQRSSESYMKRkrshggiidtnnvqMLEERRDIFYFLSFIvhntkpvghqdLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILplgillpfpaginalfshgprrsvGLARVYALWNVTSLINVVSHCVFALIHFY
marfhshphHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPPPPPPHPPSVSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGRIKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVgpgsvlrspleNATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARtisvqssgaisasgMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELGSGSGNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGqsfedlstkknYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENeptsigsfdrgrlieresrvksidmenpsgrlreetlltraqrssesymkrkrshggiidtnnvqMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
MARFHSHPHHYSLHfaflftlfifftnpnfVLSSTYHDDFSIIDFDSNLFHQDYsppspppppphppsVSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSgtpqgieggggghggrgACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYggggggRIKMVIDEYVVLdgsisadggdgghkggggsggsIYLIAYKMTGSGLISACggngyagggggRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASgmgctggvgrgkvigngvgsggghggkgglgCFNDSCVEGGISYGNANLPCELgsgsgndtsgnstagggIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNgsiggagggsggTILLFLHTLDIGDSAVLSSVggygshmggggggggRIHFHWSDIPTGDVYQPIASVRGSIRIggglgghelgggengtttgKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWlfclllvgllillalvlsvARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDlvglvisvlllgdfslvlltllqlysislVDvflvlfilplgillpfpagiNALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
********HHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFH**********************DLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTT*****************************CCLVDESKLPEDVWGGDAYSWSSLQKPW************************MVIDEYVVLD*********************IYLIAYKMTGSGLISACG**********************PKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCE*****************GIIVMGSF***************************NYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVL*******************IHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDEL*****************FL******************VHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGE**********************************************************IIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHF*
*******PHHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQD*********************LDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPP*****************G****CC*****KLPEDVWGGDAYSWSSLQKPWSY***************GGGGRIKMVIDEYVVLDGSISAD**************SIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVG*********************GCFNDSCVEGGISYGNANLP******************GGIIVMGSFEHPLSSLSVEGSV****************************GSGGTILLFLHTLDIG********************GGGRIHFHWSDIPTGDVYQPIASVRG*****************NGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFV********************FPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGEN**********************************************************IDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
*********HYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDY**************VSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGRIKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELGSGSGNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTR*************SHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
****HSHPHHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPPPPPP***SVSCTDD*DGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSR*GT*S*EFDYGGGGGGRIKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELG**********STAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGP******SQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGG************************************ET**T*AQRSSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
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iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
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MARFHSHPHHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPPPPPPHPPSVSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGRIKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELGSGSGNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1391
2960815971439 unnamed protein product [Vitis vinifera] 0.978 0.945 0.776 0.0
2555508841426 conserved hypothetical protein [Ricinus 0.976 0.953 0.789 0.0
2240889721412 predicted protein [Populus trichocarpa] 0.936 0.922 0.779 0.0
3594759291416 PREDICTED: uncharacterized protein LOC10 0.961 0.944 0.771 0.0
2241416051416 predicted protein [Populus trichocarpa] 0.967 0.950 0.778 0.0
4494613971448 PREDICTED: uncharacterized protein LOC10 0.993 0.954 0.742 0.0
4495072691417 PREDICTED: uncharacterized LOC101205923 0.971 0.953 0.733 0.0
3565156451417 PREDICTED: uncharacterized protein LOC10 0.948 0.930 0.770 0.0
3565100591447 PREDICTED: uncharacterized protein LOC10 0.964 0.927 0.760 0.0
3341876251476 uncharacterized protein [Arabidopsis tha 0.960 0.905 0.743 0.0
>gi|296081597|emb|CBI20602.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1905 bits (4936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1072/1380 (77%), Positives = 1194/1380 (86%), Gaps = 19/1380 (1%)

Query: 13   LHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPPPPPPHPPSVSCT 72
            L    L+TL I   NP+ +L+    D F++ D    +F+QDYSPP+PPPPPP PPSVSC+
Sbjct: 10   LLITILYTLSILIVNPSSILAG--EDSFAVDD----IFYQDYSPPAPPPPPPLPPSVSCS 63

Query: 73   DDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISGNFTL 132
            +DL GIG+LD+TCQ+V++L LT DVYI GKGNF I +GV+  C  SGCSI VNISGNF+L
Sbjct: 64   EDLHGIGSLDTTCQLVSNLQLTDDVYIEGKGNFYIGSGVRLDCLASGCSITVNISGNFSL 123

Query: 133  GVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEGGGGGHGGRGACC 192
            G N+SIV+G FEL A N+S  NGSVVNTT LAG  PPQTSGTPQG++G GGGHGGRGACC
Sbjct: 124  GENASIVTGAFELSAYNSSLHNGSVVNTTALAGTAPPQTSGTPQGVDGAGGGHGGRGACC 183

Query: 193  LVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGRIKMVIDEYVVLD 252
            LVD+ KLPEDVWGGDAYSWSSLQKP S+GS+GGTT++E DYGG GGGR+KM I  ++V+D
Sbjct: 184  LVDKKKLPEDVWGGDAYSWSSLQKPVSFGSKGGTTTKEEDYGGHGGGRVKMEIAGFLVVD 243

Query: 253  GSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGGGRVSVDIFSRHD 312
            GSI ADGG GG KGGGGSGGSIY+ AYKMTGSG ISACGGNG+ GGGGGR+SVD+FSRHD
Sbjct: 244  GSILADGGHGGSKGGGGSGGSIYIKAYKMTGSGRISACGGNGFGGGGGGRISVDVFSRHD 303

Query: 313  EPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPLWTNVY 372
            +PKIFVHGG+SF CP+N+G AGT YDAVPR+L VSN N STDT+TLLLEFP QPLWTNVY
Sbjct: 304  DPKIFVHGGSSFGCPENSGAAGTFYDAVPRSLIVSNNNRSTDTDTLLLEFPYQPLWTNVY 363

Query: 373  VQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSVIKVYG 432
            V++ A+ATVPLLWSRVQVQGQISL CGGVLSFGLAHYA SEFELLAEELLMSDS+IKVYG
Sbjct: 364  VRDHAKATVPLLWSRVQVQGQISLYCGGVLSFGLAHYALSEFELLAEELLMSDSIIKVYG 423

Query: 433  ALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHGQGLLN 492
            ALRM+VK+FLMWNS++L+DGGGDA VATSLLEASNL+VLKE S+IHSNANL VHGQGLLN
Sbjct: 424  ALRMSVKMFLMWNSKLLIDGGGDANVATSLLEASNLVVLKESSVIHSNANLGVHGQGLLN 483

Query: 493  LSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVELLHPP 552
            LSGPGD IEAQRLVL+LFYSIHVGPGSVLR PLENATTDAVTPRLYCE+QDCP ELLHPP
Sbjct: 484  LSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDAVTPRLYCELQDCPTELLHPP 543

Query: 553  EDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASGMGCTGGVG 612
            EDCNVNSSLSFTLQICRVEDI V GL++GSVVHFHRARTI+VQSSG IS S MGCTGGVG
Sbjct: 544  EDCNVNSSLSFTLQICRVEDITVQGLIKGSVVHFHRARTIAVQSSGKISTSRMGCTGGVG 603

Query: 613  RGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCEL--GSGSGNDTSGNSTA 670
            RGK + +G+GSGGGHGGKGG GC+  SCVEGGISYGNA+LPCEL  GSGSGNDT   STA
Sbjct: 604  RGKFLSSGLGSGGGHGGKGGDGCYKGSCVEGGISYGNADLPCELGSGSGSGNDTLDGSTA 663

Query: 671  GGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAGGGSGGTILLF 730
            GGG+IVMGS EHPLSSLS+EGSVKADG+S  + +    Y + NGS    GGGSGGTILLF
Sbjct: 664  GGGVIVMGSLEHPLSSLSIEGSVKADGESSRESTRNNYYSMNNGSNVNPGGGSGGTILLF 723

Query: 731  LHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIASVRGSIRIGGG 790
            L +L +G++AVLSS+GG+GS  GGGGGGGGRIHFHWSDIPTGDVYQPIASV+GSI   GG
Sbjct: 724  LRSLALGEAAVLSSIGGHGSLHGGGGGGGGRIHFHWSDIPTGDVYQPIASVKGSIHSRGG 783

Query: 791  LGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAV 850
            L   + G GENGT TGKACP+GLYGIFCEECP GTYKNVTGSD+SLC  CP  E P RA+
Sbjct: 784  LARDQSGMGENGTVTGKACPRGLYGIFCEECPAGTYKNVTGSDRSLCRHCPYHELPRRAI 843

Query: 851  YISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVGLLILLALVLS 910
            YISVRGGIAETPCPY+CIS+RYHMPHCYTALEELIYTFGGPWLFCLLL+G+LILLALVLS
Sbjct: 844  YISVRGGIAETPCPYKCISDRYHMPHCYTALEELIYTFGGPWLFCLLLLGVLILLALVLS 903

Query: 911  VARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNT 970
            VARMKFVGVDE PGPAPTQHGSQIDHSFPFLESLNEVLETNRAEES SHVHRMYFMGPNT
Sbjct: 904  VARMKFVGVDESPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESQSHVHRMYFMGPNT 963

Query: 971  FSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAWSWQ 1030
            FS+PWHLPHTPPEQIKEIVYEGAFN FVDEINAIA Y WWEG+++SIL+ILAYPLAWSWQ
Sbjct: 964  FSEPWHLPHTPPEQIKEIVYEGAFNGFVDEINAIAAYQWWEGSMHSILSILAYPLAWSWQ 1023

Query: 1031 QWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDEKRT 1090
            QWRRR KLQ+LRE+VRS YDHACLRSCRSRALYEGLKVAAT DLMLA++DFFLGGDEKRT
Sbjct: 1024 QWRRRKKLQQLREFVRSGYDHACLRSCRSRALYEGLKVAATSDLMLAHVDFFLGGDEKRT 1083

Query: 1091 DLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQLRL 1150
            DLP  L  RFPMSL FGGDGSYMAPFSL +DNILTSLMSQ +PPT  YRLVAGLNAQLRL
Sbjct: 1084 DLPFRLQQRFPMSLPFGGDGSYMAPFSLNSDNILTSLMSQAIPPTTWYRLVAGLNAQLRL 1143

Query: 1151 VRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGENEP 1210
            VRRGRLR TFRPVLRWLETHA+P L++HG++VDLAWFQ+TACGYCQYGLLVYAV  E E 
Sbjct: 1144 VRRGRLRVTFRPVLRWLETHASPALRVHGVQVDLAWFQSTACGYCQYGLLVYAVEDETES 1203

Query: 1211 TSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGIIDTN 1270
            T +   D     E +SR     M           LL+ A+RS+ES MKRK+ +G I+DTN
Sbjct: 1204 TPVDGVDGAIQNEHQSRDFGAAM-----------LLSGARRSTESLMKRKKPYGYILDTN 1252

Query: 1271 NVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTLLQLYSISLVD 1330
            ++ MLEE++DIFY LSFI+HNTKPVG  DLVGLVIS+LLL D SLVLLTLLQLYSISL D
Sbjct: 1253 SLHMLEEKKDIFYPLSFIIHNTKPVGQHDLVGLVISMLLLADISLVLLTLLQLYSISLAD 1312

Query: 1331 VFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHF 1390
            VFLVLF+LPLGILLPFPAGINALFSHGPRRS GLARVYALWN+TSLINV+   +   +H+
Sbjct: 1313 VFLVLFVLPLGILLPFPAGINALFSHGPRRSAGLARVYALWNITSLINVMVAFICGYVHY 1372

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255550884|ref|XP_002516490.1| conserved hypothetical protein [Ricinus communis] gi|223544310|gb|EEF45831.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224088972|ref|XP_002308587.1| predicted protein [Populus trichocarpa] gi|222854563|gb|EEE92110.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359475929|ref|XP_002278525.2| PREDICTED: uncharacterized protein LOC100243932 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224141605|ref|XP_002324157.1| predicted protein [Populus trichocarpa] gi|222865591|gb|EEF02722.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449461397|ref|XP_004148428.1| PREDICTED: uncharacterized protein LOC101205923 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449507269|ref|XP_004162983.1| PREDICTED: uncharacterized LOC101205923 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356515645|ref|XP_003526509.1| PREDICTED: uncharacterized protein LOC100804207 [Glycine max] Back     alignment and taxonomy information
>gi|356510059|ref|XP_003523758.1| PREDICTED: uncharacterized protein LOC100783686 [Glycine max] Back     alignment and taxonomy information
>gi|334187625|ref|NP_001154709.2| uncharacterized protein [Arabidopsis thaliana] gi|332004329|gb|AED91712.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1391
TAIR|locus:21237621432 AT4G32920 "AT4G32920" [Arabido 0.874 0.849 0.579 0.0
TAIR|locus:2123762 AT4G32920 "AT4G32920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3712 (1311.7 bits), Expect = 0., Sum P(2) = 0.
 Identities = 714/1232 (57%), Positives = 860/1232 (69%)

Query:    69 VSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISG 128
             VSC DDL G+G+LDSTC++V DLNLTRD+ I GKGN  +L GV+  C   GCSI+VNISG
Sbjct:    58 VSCVDDLGGVGSLDSTCKLVADLNLTRDLNITGKGNLHVLPGVRLVCQFPGCSISVNISG 117

Query:   129 NFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSXXXXXXXXXXXXXXXX 188
             NF+L  NSS+++GTF L A+NA F   S V+TTGLAG PPP TS                
Sbjct:   118 NFSLAENSSVIAGTFRLAAENAEFGLSSAVDTTGLAGEPPPDTSGTPEGVEGAGGGYGGR 177

Query:   189 XACCLVDES-KLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYXXXXXXRIKMVIDE 247
              ACCL D + K+PEDV+GGD Y WSSL+KP  YGSRGG+TS E DY       + + I  
Sbjct:   178 GACCLSDTTTKIPEDVFGGDVYGWSSLEKPEIYGSRGGSTSNEVDYGGGGGGTVAIEILG 237

Query:   248 YVVLXXXXXXXXXXXXXXXXXXXXXXIYLIAYKMTGSGLISACXXXXXXXXXXXRVSVDI 307
             Y+ L                      I+++A+KM G+G +SA            RVSVDI
Sbjct:   238 YISLNGSVLADGASGGVKGGGGSGGSIFVMAHKMAGNGRLSASGGDGYAGGGGGRVSVDI 297

Query:   308 FSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPL 367
             +SRH +PKIF +GG SF CP+NAG AGTLYD +  +LT+ N+N +T T+TLLLEFPN  L
Sbjct:   298 YSRHSDPKIFFNGGRSFGCPENAGAAGTLYDVISESLTIDNHNKTTYTDTLLLEFPNHRL 357

Query:   368 WTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSV 427
             +TN+Y++N A+  VPL WSRVQVQG ISLS GG L+FGL  YA+SEFEL AEELLMS+S 
Sbjct:   358 FTNLYIRNMAKVAVPLRWSRVQVQGLISLSNGGELNFGLPRYASSEFELFAEELLMSNSA 417

Query:   428 IKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHG 487
             IKVYGALRMTVK+FLM  S M +DGGG   + TS+LE SNL+VLKE S+I SN NL VHG
Sbjct:   418 IKVYGALRMTVKVFLMLKSRMFIDGGGVTILGTSMLEISNLLVLKESSVIQSNGNLGVHG 477

Query:   488 QGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVE 547
             QGLLNL+G GD IEAQRL+L+LFYSI VG G+VLR PL+NA+T  +TP+LYC+ QDCPVE
Sbjct:   478 QGLLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTGGLTPKLYCQRQDCPVE 537

Query:   548 LLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASXXXX 607
             LLHPPEDCNVNSSL FTLQICRVEDI V+GL++GSV+ FH ART+ V+SSG ISA     
Sbjct:   538 LLHPPEDCNVNSSLPFTLQICRVEDITVEGLIKGSVIQFHLARTVLVRSSGTISADGMGC 597

Query:   608 XXXXXXXXXXXXXXXXXXXXXXXXXXXCFNDSCVEGGISYGNANLPCELXXXXXXXXXXX 667
                                        C+N +C+EGG SYGNA+LPCEL           
Sbjct:   598 KGGVGTGRFLRSGIGSGGGHGGKGGSGCYNHTCIEGGESYGNADLPCELGSGSGNEESTD 657

Query:   668 XXXXXXIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNXXXXXXXXXXXXTI 727
                   IIV+GS EHPLSSLS+EGS+  DG+S      +K     +            T+
Sbjct:   658 SVAGGGIIVLGSLEHPLSSLSLEGSITTDGES-----PRKTLKGLSNSSLGPGGGSGGTV 712

Query:   728 LLFLHTLDIGDSAVLSSVXXXXXXXXXXXXXXXRIHFHWSDIPTGDVYQPIASVRGSIRI 787
             LLFL TL+IG SA+LSS+               RIHFHWSDIPTGDVY P+A V+G + +
Sbjct:   713 LLFLRTLEIGRSAILSSIGGNGSLKGGGGGSGGRIHFHWSDIPTGDVYHPVAIVKGRVYV 772

Query:   788 XXXXXXXXXXXXXXXXXXXKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPH 847
                                KACP+GLYG+FCEECP GTYKNVTGSDK+LCH CP  + PH
Sbjct:   773 RGGMGIIEDNIGGNGTLTGKACPEGLYGLFCEECPSGTYKNVTGSDKALCHLCPANDIPH 832

Query:   848 RAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWXXXXXXXXXXXXXXX 907
             RAVY++VRGG+AETPCPY+CIS+RYHMPHCYT LEELIYTFGGPW               
Sbjct:   833 RAVYVTVRGGVAETPCPYKCISDRYHMPHCYTTLEELIYTFGGPWLFGVLLVVVLLLLAL 892

Query:   908 XXXXARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMG 967
                 ARMKFV  DEL G APTQHGSQIDHSFPFLESLNEV+ET+R EES  H+HR+YF+G
Sbjct:   893 VFSVARMKFVSGDELHGSAPTQHGSQIDHSFPFLESLNEVMETSRVEESQGHMHRIYFLG 952

Query:   968 PNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAW 1027
             PNTFS+PWHL HTPPE+IKEIVYE AFN FVDE+N IA Y WWEGAIY +L++L YPLAW
Sbjct:   953 PNTFSEPWHLSHTPPEEIKEIVYEAAFNGFVDEVNVIAAYQWWEGAIYIMLSVLVYPLAW 1012

Query:  1028 SWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDE 1087
             SWQQ RRR+K Q+LR++VRSEYDH+CLRSCRSRALYEGLKVAATPDLMLA+LDFFLGGDE
Sbjct:  1013 SWQQSRRRLKFQKLRDFVRSEYDHSCLRSCRSRALYEGLKVAATPDLMLAHLDFFLGGDE 1072

Query:  1088 KRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQ 1147
             KR+DLPP +H R PM LIFGGDGSYMA +SLQ+D+ILTSL+SQLVPPT  YR VAGLNAQ
Sbjct:  1073 KRSDLPPQVHQRLPMPLIFGGDGSYMAYYSLQSDDILTSLLSQLVPPTTWYRFVAGLNAQ 1132

Query:  1148 LRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGE 1207
             LRLV++G+LR+TFR V+RW+ETH NP L+ HG+RVDLA FQA +   CQYG+LV+ +   
Sbjct:  1133 LRLVQQGKLRSTFRSVMRWIETHGNPALKRHGVRVDLARFQALSSSSCQYGILVHTIA-- 1190

Query:  1208 NEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGII 1267
             +E  S  S D       +       +EN SG  RE     +  RS  ++++ +   G II
Sbjct:  1191 DEVASTRSDDE----TEQQHPWGTQIENHSGDFRENF---QPLRSEINHVRHQEC-GEII 1242

Query:  1268 DTNNVQMLEERRDIFYFLSFIVHNTKPVGHQD 1299
             D  ++Q L+E +D+   +SF++HNTKPVGHQD
Sbjct:  1243 DIGSLQFLKEEKDVLSLISFLIHNTKPVGHQD 1274
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0006486 "protein glycosylation" evidence=RCA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1391
pfam0769948 pfam07699, GCC2_GCC3, GCC2 and GCC3 0.002
>gnl|CDD|219525 pfam07699, GCC2_GCC3, GCC2 and GCC3 Back     alignment and domain information 
 Score = 37.4 bits (87), Expect = 0.002
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 818 CEECPVGTYKNVTGSDKSLCHQCPP 842
           CE CP GTY+   G D   C  CPP
Sbjct: 11  CEPCPRGTYQPEEGQDS--CIPCPP 33

Length = 48

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1391
KOG0196 996 consensus Tyrosine kinase, EPH (ephrin) receptor f 96.34
PF0769948 GCC2_GCC3: GCC2 and GCC3; InterPro: IPR011641 Prot 96.11
PF10256118 Erf4: Golgin subfamily A member 7/ERF4 family; Int 93.74
PHA02637127 TNF-alpha-receptor-like protein; Provisional 91.46
PF0756254 NCD3G: Nine Cysteines Domain of family 3 GPCR; Int 91.4
cd0018598 TNFR Tumor necrosis factor receptor (TNFR) domain; 90.91
PHA02637127 TNF-alpha-receptor-like protein; Provisional 82.89
KOG09211282 consensus Dosage compensation complex, subunit MLE 81.9
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] Back     alignment and domain information 
Probab=96.34  E-value=0.0032  Score=79.02  Aligned_cols=61  Identities=36%  Similarity=0.805  Sum_probs=44.8

Q ss_pred             CCCCCCcc----cccceeCCCCcccccCCCCCCCcccCCCCCCCCcceeEeecCCccCCCCCccccCCCcCC------Cc
Q 000613          807 KACPKGLY----GIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHM------PH  876 (1391)
Q Consensus       807 ~~CP~Gly----G~fC~eCP~GtYKn~sGs~~~lC~pCp~~~~p~ra~~i~v~gG~~~~~Cpy~C~s~~~~~------p~  876 (1391)
                      =-|-+||.    |.-|+.||.||||...+  ..+|.+||.+....         -...+.|.  |..++|+.      -.
T Consensus       261 C~C~aGye~~~~~~~C~aCp~G~yK~~~~--~~~C~~CP~~S~s~---------~ega~~C~--C~~gyyRA~~Dp~~mp  327 (996)
T KOG0196|consen  261 CVCKAGYEEAENGKACQACPPGTYKASQG--DSLCLPCPPNSHSS---------SEGATSCT--CENGYYRADSDPPSMP  327 (996)
T ss_pred             eeecCCCCcccCCCcceeCCCCcccCCCC--CCCCCCCCCCCCCC---------CCCCCccc--ccCCcccCCCCCCCCC
Confidence            45888883    67799999999999875  47899999865322         12357786  99999974      24


Q ss_pred             ccch
Q 000613          877 CYTA  880 (1391)
Q Consensus       877 C~Tp  880 (1391)
                      |.+|
T Consensus       328 CT~P  331 (996)
T KOG0196|consen  328 CTRP  331 (996)
T ss_pred             CCCC
Confidence            7665

>PF07699 GCC2_GCC3: GCC2 and GCC3; InterPro: IPR011641 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>PF10256 Erf4: Golgin subfamily A member 7/ERF4 family; InterPro: IPR019383 Proteins in this entry include Golgin subfamily A member 7 and the Ras modification protein ERF4 Back     alignment and domain information
>PHA02637 TNF-alpha-receptor-like protein; Provisional Back     alignment and domain information
>PF07562 NCD3G: Nine Cysteines Domain of family 3 GPCR; InterPro: IPR011500 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>cd00185 TNFR Tumor necrosis factor receptor (TNFR) domain; superfamily of TNF-like receptor domains Back     alignment and domain information
>PHA02637 TNF-alpha-receptor-like protein; Provisional Back     alignment and domain information
>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1391
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.3 bits (153), Expect = 6e-10
 Identities = 98/616 (15%), Positives = 182/616 (29%), Gaps = 186/616 (30%)

Query: 810  PKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCIS 869
             + +   F EE     YK +    K+   Q  P       +YI  R  +      +    
Sbjct: 75   QEEMVQKFVEEVLRINYKFLMSPIKTEQRQ--PS--MMTRMYIEQRDRLYNDNQVFA--- 127

Query: 870  ERYHMP--HCYTALEELIYTFGGPWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAP 927
             +Y++     Y  L +                      AL L +   K V +D + G   
Sbjct: 128  -KYNVSRLQPYLKLRQ----------------------AL-LELRPAKNVLIDGVLG--- 160

Query: 928  TQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMGPNTFSQPW------HLPHTP 981
               G            +   L+      S+    +M F     F   W      + P T 
Sbjct: 161  --SGKT---------WV--ALDVCL---SYKVQCKMDF---KIF---WLNLKNCNSPETV 198

Query: 982  PEQIKEIVY--EGAFNSFVD-EINAIATYHWWEGAIYSILAILAYPLA-------WSWQQ 1031
             E +++++Y  +  + S  D   N     H  +  +  +L    Y           + + 
Sbjct: 199  LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 1032 WRRRMKLQRLREYVRSEYDHAC--LRSCRSRALYEGLKVAA-------------TPDLML 1076
            W                ++ +C  L + R + + + L  A              TPD + 
Sbjct: 259  WN--------------AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304

Query: 1077 AYLDFFLGGDEKRTDLPP--CLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPP 1134
            + L  +L    +  DLP      +   +S+I       +       DN       +L   
Sbjct: 305  SLLLKYLDCRPQ--DLPREVLTTNPRRLSII----AESIRDGLATWDNWKHVNCDKLT-- 356

Query: 1135 TICYRLVAGLNAQLRLVRRGRLR--ATFRPVLRWLETHAN-PTLQLHGLRVDLAWFQATA 1191
            TI   + + LN       R      + F P        A+ PT+ L  +     WF    
Sbjct: 357  TI---IESSLNVLEPAEYRKMFDRLSVFPP-------SAHIPTILLSLI-----WFDVI- 400

Query: 1192 CGYCQYGLLVYAVGGENEPTSI-GSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQ 1250
                           +++   +     +  L+E+         +  +  +    L  + +
Sbjct: 401  ---------------KSDVMVVVNKLHKYSLVEK-------QPKESTISIPSIYLELKVK 438

Query: 1251 RSSESYMKRKRSHGGIIDTNNVQMLEERRDIF------YFLSFIVHNTKPVGHQDLVGLV 1304
              +E  +     H  I+D  N+    +  D+       YF S I H+ K + H + + L 
Sbjct: 439  LENEYAL-----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493

Query: 1305 ISVLLLGDFS-----LVLLTLLQLYSISLVDVFLVL-----FILP--------LGILLPF 1346
              V L  DF      +   +     S S+++    L     +I          +  +L F
Sbjct: 494  RMVFL--DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 1347 PAGINALFSHGPRRSV 1362
               I           +
Sbjct: 552  LPKIEENLICSKYTDL 567
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1391
d2heyr354 g.24.1.1 (R:29-82) Tumor necrosis factor receptor 0.004
d1jmab156 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (H 0.004
>d2heyr3 g.24.1.1 (R:29-82) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 54 Back     information, alignment and structure

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Tumor necrosis factor receptor superfamily member 4, OX40L receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 5/42 (11%)

Query: 809 CPKGLY---GIFCEECPVGTYKNV--TGSDKSLCHQCPPQEF 845
           C    Y      C EC  G       + S  ++C  C P  +
Sbjct: 3   CVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFY 44
>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo sapiens) [TaxId: 9606]} Length = 56 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1391
d1sg1x342 Low affinity neurotrophin receptor p75NTR {Rat (Ra 91.54
d1exta159 Tumor necrosis factor (TNF) receptor {Human (Homo 90.12
d1jmab156 Cellular receptor HveA {Human (Homo sapiens) [TaxI 88.9
d1jmab156 Cellular receptor HveA {Human (Homo sapiens) [TaxI 88.67
d2heyr354 Tumor necrosis factor receptor superfamily member 81.3
>d1sg1x3 g.24.1.1 (X:96-137) Low affinity neurotrophin receptor p75NTR {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Low affinity neurotrophin receptor p75NTR
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.54  E-value=0.041  Score=28.42  Aligned_cols=30  Identities=37%  Similarity=0.805  Sum_probs=23.2

Q ss_pred             CCCCCCCC---------CCCCEECCCCCCCCCCCCCCCCC
Q ss_conf             78999754---------53221289994125579999885
Q 000613          807 KACPKGLY---------GIFCEECPVGTYKNVTGSDKSLC  837 (1391)
Q Consensus       807 ~~CP~Gly---------G~fC~eCP~GtYKn~sGs~~~~C  837 (1391)
                      ..||+|+.         .+-|++||.|||.+++- ....|
T Consensus         3 s~CppG~GV~~~gt~~~DT~C~~C~~GtFSd~~S-s~~~C   41 (42)
T d1sg1x3           3 SVCEVGSGLVFSCQDKQNTVCEECPEGTYSDEAN-HVDPC   41 (42)
T ss_dssp             CCBCTTEEEEECCBTTBCCEEEECCTTEECCSCB-SSCCC
T ss_pred             CCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCC-CCCCC
T ss_conf             6388985852438688893443893986448677-75756
>d1exta1 g.24.1.1 (A:13-71) Tumor necrosis factor (TNF) receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2heyr3 g.24.1.1 (R:29-82) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure