Citrus Sinensis ID: 000634

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380
MVELHKEEDDNKCATYHDNKKDMDKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEVKSGEGSESDTEDVDMDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFDISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSESGNNYSIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDEI
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccccccc
ccEEEEccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcEEcccccccHHHHHHHHHHHHHHHHHcccccEcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccEccEcccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccEEccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHEcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHccccHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccEcccccHHHHHHHHHHHHHHHHHHHHHHccccc
mvelhkeeddnkcatyhdnkkdmDKYKRKQLGLSCMLNTEVGSVLAVIRRpldahyvqedtFESAVVQSLKSLRSlifnpqqewrtvdpsiylspfldvvqsddipaaATGVALSAILKILKLeifdektpgvkDAINIVVTGItscqlektdpisedAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVqqsasrgdlLQRSARYTMHELIQIIFSrlpdievksgegsesdtedvdmdanlgsgygirSAVDIFHFLCSLLNVVELvegegsrtsdvDVQLFALVLINSAIElsgdaigkhpkLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVyvnydcdplcRNVIEEIGKLLckhsfpvsgpltssqIQAFEGLVILIHNIAEsidkegdtspsgpypveiteykpfweekpnddsdTWVEYVRLRKAQKRKSliagnhfnrdeKKGLEYLKLCqlvsdppdpkALAFFFRFTQGLDKnmigdylgdaDEFHIQVLKEFTETFEFAGMTLDNALRTYLEtfrlpgesQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLntdqhnpqvkkkmTEEEFirnnrginggkdlpREYLSELFHSIASNAISvfgqsgqivdmnpsRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFttllnpyatAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKrlkllpqsviefdisttdapshsraesgvvfpaydptsgnrrssgmisRFTHflsldspedsisLGMNEFEQNLKVIKQcqignifsnstnlpLEALQNLGRSLIFAAagkgqkfstpveeeetvGFCWDLIIAIAIANNnrfqafwpsFHDYLLLVTqfplfspipfAEKAMVGLFKVCLRLLSSyqsdklpeeLIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSvtgrhpdthEQAVETLIMLISdgthiskaTYAYCIDCAFSFvalknspleknlKILDLLSDSVNLLIQWYKNAwsesgnnysiasststssledykglnsLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLaedldfssincincfNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIaespgfrtFWLGVLRRMDtcmkadlgpygetklqeTIPDLLRNMITMMKEreilapkededLWEITYIQIQWiapslkeelfpdei
mvelhkeeddnkcatyhdnkkdmdKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLeifdektpgvkDAINIVVTgitscqlektdpisedAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIfsrlpdievksgegsesdtedvDMDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESidkegdtspsgpyPVEITEykpfweekpnddsdTWVEYVRLRKaqkrksliagnhfnrdeKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTeeefirnnrginggkdLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFDisttdapshsraesgvvfpayDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSyqsdklpeeLIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNawsesgnnySIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKadlgpygetklqetIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWiapslkeelfpdei
MVELHKEEDDNKCATYHDNKKDMDKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEVKSGEGSESDTEDVDMDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCllklkrlkllPQSVIEFDISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLiiaiaiannnRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSESGNNYSIAsststssLEDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDEI
****************************KQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDI*******************NLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAES**************VEITEYKPFWE*******DTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTD*********************INGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFDIS**********************************FTHFLS********SLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSESGNNY***********EDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEY*****************KNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSL*********
***********************************MLNTEVGSVLAV************************SLRSL*FN****WRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFH**********************LIQIIFSRLPDIEVKS*************DANLGSGYGIRSAVDIFHFLCS*********************LFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVV**************VALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESI*********************************************RKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASN*********************LINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVI*****************************************************************VIKQCQIGNIFSNSTNLPLEALQNLGRSLIFA*****************VGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSP*****************************************************NFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHE****************SMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADL******KLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPD**
**********NKCATYHDNKKDMDKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEV***********DVDMDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFDIST********AESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSESGNNYS**********EDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDEI
**********************MDKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLP************************SGYGIRSAVDIFHFLCSLLNVVEL*E*EGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEG****************************TWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQS*****************************************************SISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSE*********************LNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDE*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVELHKEEDDNKCATYHDNKKDMDKYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYVQEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEVKSGEGSESDTEDVDMDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFDISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVNLLIQWYKNAWSESGNNYSIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRxxxxxxxxxxxxxxxxxxxxxLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDEI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1380 2.2.26 [Sep-21-2011]
F4K2K31375 ARF guanine-nucleotide ex yes no 0.976 0.979 0.689 0.0
Q425101451 ARF guanine-nucleotide ex no no 0.950 0.904 0.433 0.0
Q9FLY51443 ARF guanine-nucleotide ex no no 0.95 0.908 0.394 0.0
Q92538 1859 Golgi-specific brefeldin yes no 0.403 0.299 0.337 2e-73
Q9P7R81462 Uncharacterized protein C yes no 0.521 0.492 0.261 1e-72
Q9R1D7 1856 Golgi-specific brefeldin yes no 0.405 0.301 0.330 1e-71
Q9LZX8 1793 Brefeldin A-inhibited gua no no 0.557 0.428 0.249 3e-65
Q9LPC5 1750 Brefeldin A-inhibited gua no no 0.626 0.494 0.254 5e-65
F4JSZ5 1687 Brefeldin A-inhibited gua no no 0.657 0.537 0.243 1e-61
F4JN05 1706 Brefeldin A-inhibited gua no no 0.581 0.470 0.247 5e-56
>sp|F4K2K3|GNL2_ARATH ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana GN=GNL2 PE=2 SV=1 Back     alignment and function desciption
 Score = 1951 bits (5054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 948/1375 (68%), Positives = 1146/1375 (83%), Gaps = 28/1375 (2%)

Query: 25   KYKRKQLGLSCMLNTEVGSVLAVIRRPLDAHYV---QEDTFESAVVQSLKSLRSLIFNPQ 81
            + KRK+LG+SCMLNTEVG+VLAVIRRPL   Y+   + D  +S+V QSLKSLR+LIFNPQ
Sbjct: 7    RAKRKELGISCMLNTEVGAVLAVIRRPLSESYLSPQETDHCDSSVQQSLKSLRALIFNPQ 66

Query: 82   QEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVV 141
            Q+WRT+DPS+YLSPFL+V+QSD+IPA+AT VALS+ILKILK+EIFDEKTPG KDA+N +V
Sbjct: 67   QDWRTIDPSVYLSPFLEVIQSDEIPASATAVALSSILKILKIEIFDEKTPGAKDAMNSIV 126

Query: 142  TGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSAS 201
            +GITSC+LEKTD +SEDAVMMRILQVL  IM+H +S LL D+AVCTIVNTCF VVQQS  
Sbjct: 127  SGITSCRLEKTDLVSEDAVMMRILQVLTGIMKHPSSELLEDQAVCTIVNTCFQVVQQSTG 186

Query: 202  RGDLLQRSARYTMHELIQIIFSRLPDIEVKSGEG---SESDTEDVDMDANLGSGYGIRSA 258
            RGDLLQR+ RYTMHELIQIIFSRLPD EV+  EG   SESDT+++DM      GYGIR  
Sbjct: 187  RGDLLQRNGRYTMHELIQIIFSRLPDFEVRGDEGGEDSESDTDEIDMSG----GYGIRCC 242

Query: 259  VDIFHFLCSLLNVVELVE---GEGSRTSDVDVQLFALVLINSAIELSGDAIGKHPKLLRM 315
            +DIFHFLCSLLNVVE+VE   G    T+D DVQ+FALVLINSAIELSGDAIG+HPKLLRM
Sbjct: 243  IDIFHFLCSLLNVVEVVENLEGTNVHTADEDVQIFALVLINSAIELSGDAIGQHPKLLRM 302

Query: 316  VQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNS 375
            VQDDLFHHLIHYGA SSPLVLSMICS +LNIYHFLR+F+RLQLEAFF FV+LRV A    
Sbjct: 303  VQDDLFHHLIHYGASSSPLVLSMICSCILNIYHFLRKFMRLQLEAFFSFVLLRVTAFTGF 362

Query: 376  HQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQ 435
              LQEVALEG+INFCRQP F++E YVNYDCDP+CRN+ EE GK+LC+H+FP SGPLTS Q
Sbjct: 363  LPLQEVALEGLINFCRQPAFIVEAYVNYDCDPMCRNIFEETGKVLCRHTFPTSGPLTSIQ 422

Query: 436  IQAFEGLVILIHNIAESIDKEGD---------TSPSGPYPVEITEYKPFWEEKPNDDSDT 486
            IQAFEGLVILIHNIA+++D+E D         ++   P PVEI EY PFW +KP +D +T
Sbjct: 423  IQAFEGLVILIHNIADNMDREEDEGNEEDDNNSNVIKPSPVEIHEYIPFWIDKPKEDFET 482

Query: 487  WVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDK 546
            WV+++R+RKAQKRK  IA NHFNRDEKKGLEYLK   LVSDP DP ALA FFRFT GLDK
Sbjct: 483  WVDHIRVRKAQKRKLAIAANHFNRDEKKGLEYLKYNYLVSDPLDPMALASFFRFTPGLDK 542

Query: 547  NMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFS 606
             MIGDYLGD DE H+ VL+ FT TFEF GM LD ALRT+LE+FRLPGESQKI+R++EAFS
Sbjct: 543  TMIGDYLGDPDELHLSVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFS 602

Query: 607  DRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLP 666
            +RF+DQQ+S+IF +KD+V+I CYSLIMLNTDQHNPQV++KMTE+EFIRNNR IN G DLP
Sbjct: 603  ERFYDQQSSDIFASKDTVHILCYSLIMLNTDQHNPQVRRKMTEDEFIRNNRAINAGNDLP 662

Query: 667  REYLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMF 726
            +EYLSELF SIA+NA ++   SG  V+MNP+RWIEL+NR+KT  PF LC FDRR+GRDMF
Sbjct: 663  KEYLSELFQSIATNAFALSTHSGP-VEMNPNRWIELMNRTKTTQPFSLCQFDRRIGRDMF 721

Query: 727  ASIAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLL 786
            A+IAGP++AA+SAFF+H+D+D++L EC++ +ISI+R+AQYGLED LDEL+ASFCKFTTLL
Sbjct: 722  ATIAGPSIAAVSAFFEHSDDDEVLHECVDAMISIARVAQYGLEDILDELIASFCKFTTLL 781

Query: 787  NPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQS 846
            NPY T EETLFAFS+DMKP+MATLAVFTLAN FG+SIR GWRNIVDCLLKL++L+LLPQS
Sbjct: 782  NPYTTPEETLFAFSHDMKPRMATLAVFTLANTFGDSIRGGWRNIVDCLLKLRKLQLLPQS 841

Query: 847  VIEFDISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMN 906
            VIEF+I+  +  S S   +     + D     R+ S ++ RF+HFL+LD+ E+S++LGM+
Sbjct: 842  VIEFEINEENGGSESDMNN---VSSQDTKFNRRQGSSLMGRFSHFLALDNVEESVALGMS 898

Query: 907  EFEQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFC 966
            EFEQNLKVIKQC+IG IFS S+ LP  A+ NLGRSLI+AAAGKGQKFST +EEEETV FC
Sbjct: 899  EFEQNLKVIKQCRIGQIFSKSSVLPDVAVLNLGRSLIYAAAGKGQKFSTAIEEEETVKFC 958

Query: 967  WDLIIAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQ 1026
            WDLII IA++N +RF  FWPS+H+YLL V  FPLFSPIPF EK + GLF+VC+++L+S  
Sbjct: 959  WDLIITIALSNVHRFNMFWPSYHEYLLNVANFPLFSPIPFVEKGLPGLFRVCIKILASNL 1018

Query: 1027 SDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLS 1086
             D LPEELIF+S+ +MWK+DKEI++TC   IT+ VSKIII+Y ANL + +GWKSVL LLS
Sbjct: 1019 QDHLPEELIFRSLTIMWKIDKEIIETCYDTITEFVSKIIIDYSANLHTNIGWKSVLQLLS 1078

Query: 1087 VTGRHPDTHEQAVETLIMLIS-DGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLL 1145
            + GRHP+T EQAV+ LI L+S + +H+S+++YAYCIDCAFSFVAL+NS +EKNLKILDL+
Sbjct: 1079 LCGRHPETKEQAVDALIGLMSFNASHLSQSSYAYCIDCAFSFVALRNSSVEKNLKILDLM 1138

Query: 1146 SDSVNLLIQWYKNAWSESGNNYSIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTS 1205
            +DSV +L++WYK A +++ N+YS AS+TS+SS  +   L  +NF  +LF+KL EA RKT+
Sbjct: 1139 ADSVTMLVKWYKTASTDTANSYSPASNTSSSSSMEENNLRGVNFVHHLFLKLSEAFRKTT 1198

Query: 1206 LARREEIRNHAVLALQKCFTLA-EDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRREN 1264
            LARREEIRN AV +L+K FT+  EDL F+   CI C + VIF  +DDLHEK+++YSRREN
Sbjct: 1199 LARREEIRNRAVTSLEKSFTMGHEDLGFTPSGCIYCIDHVIFPTIDDLHEKLLDYSRREN 1258

Query: 1265 AEREMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGE 1324
            AEREMRSMEGTLK AM++L NVFL +++QI ES  FRTFWLGVLRRMDTCMKADLG YG+
Sbjct: 1259 AEREMRSMEGTLKIAMKVLMNVFLVYLEQIVESAEFRTFWLGVLRRMDTCMKADLGEYGD 1318

Query: 1325 TKLQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDE 1379
             KLQE +P+LL  MI  MKE+EIL  KED+DLWEITYIQIQWIAP+LK+ELFPDE
Sbjct: 1319 NKLQEVVPELLTTMIGTMKEKEILVQKEDDDLWEITYIQIQWIAPALKDELFPDE 1373
Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination.
Arabidopsis thaliana (taxid: 3702)
>sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana GN=GN PE=1 SV=1 Back     alignment and function description
>sp|Q9FLY5|GNL1_ARATH ARF guanine-nucleotide exchange factor GNL1 OS=Arabidopsis thaliana GN=GNL1 PE=3 SV=1 Back     alignment and function description
>sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2 Back     alignment and function description
>sp|Q9P7R8|YHV3_SCHPO Uncharacterized protein C211.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC211.03c PE=1 SV=1 Back     alignment and function description
>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Cricetulus griseus GN=GBF1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 Back     alignment and function description
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 Back     alignment and function description
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1380
255558936 2072 peptidase, putative [Ricinus communis] g 0.984 0.655 0.744 0.0
2254452821390 PREDICTED: pattern formation protein EMB 0.996 0.989 0.740 0.0
4494433231388 PREDICTED: pattern formation protein EMB 0.991 0.985 0.727 0.0
2241434981375 predicted protein [Populus trichocarpa] 0.986 0.990 0.723 0.0
1478528311366 hypothetical protein VITISV_034627 [Viti 0.979 0.989 0.725 0.0
2978121451376 sec7 domain-containing protein [Arabidop 0.977 0.980 0.689 0.0
152411421375 protein GNOM-like 2 [Arabidopsis thalian 0.976 0.979 0.689 0.0
3575004471369 Pattern formation protein EMB30 [Medicag 0.977 0.985 0.664 0.0
3565296121373 PREDICTED: pattern formation protein EMB 0.984 0.989 0.661 0.0
3265334581386 predicted protein [Hordeum vulgare subsp 0.981 0.976 0.585 0.0
>gi|255558936|ref|XP_002520491.1| peptidase, putative [Ricinus communis] gi|223540333|gb|EEF41904.1| peptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 2140 bits (5545), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1019/1369 (74%), Positives = 1204/1369 (87%), Gaps = 11/1369 (0%)

Query: 19   NKKDMDKYKRKQLGLSCMLNTEVGSVLAVIRRPLD---AHYVQEDTFESAVVQSLKSLRS 75
            +K   ++ +RK++ LSCMLNTE+ +VLAVIRRP D   + + QE+ ++++++ SLKSLR 
Sbjct: 705  DKSWQERKRRKEVSLSCMLNTELSAVLAVIRRPHDPTNSVFHQEEGYDTSILHSLKSLRD 764

Query: 76   LIFNPQQEWRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKD 135
            LIFNPQQEWRT+DPS+Y+SPFLDV+QSD IPA AT VALSAI KILKL+ FDEKTPG K+
Sbjct: 765  LIFNPQQEWRTIDPSVYISPFLDVIQSDGIPATATNVALSAISKILKLQFFDEKTPGAKE 824

Query: 136  AINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHV 195
            A+N +VTGITSC+LE+TDP +EDAVMMRILQ L +I++HR S+LLTD AVCTIVNTCF V
Sbjct: 825  AVNSIVTGITSCRLERTDPSTEDAVMMRILQALTSIIKHRTSVLLTDHAVCTIVNTCFQV 884

Query: 196  VQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEVKSGEGSESDTEDVDMDANLGSGYGI 255
            VQQS  R DLLQR A++ M E+I+IIF+RL D EVKSGE SESDTED+D+ +N+ SGYG+
Sbjct: 885  VQQSTHRADLLQRGAKFAMREMIEIIFARLQDFEVKSGEESESDTEDIDIGSNMDSGYGV 944

Query: 256  RSAVDIFHFLCSLLNVVELVEGEG--SRTSDVDVQLFALVLINSAIELSGDAIGKHPKLL 313
            R  VDIFHFLCSLLNVV++VE EG  S+ SD ++Q+F LVLINSA+ELSGD IGK PKLL
Sbjct: 945  RCVVDIFHFLCSLLNVVDIVESEGFSSQASDQNIQIFGLVLINSAVELSGDTIGKQPKLL 1004

Query: 314  RMVQDDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASG 373
            RM+QDDLFHHLIHYG  SS LVLSMICSTVLNIYH LR FIR+QLEAF GFV+LR A +G
Sbjct: 1005 RMIQDDLFHHLIHYGISSSTLVLSMICSTVLNIYHSLRSFIRVQLEAFLGFVLLRTAGAG 1064

Query: 374  NSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTS 433
            +  QLQEVALE IINFCRQP+F++E+YVNYDCDP+CRN+ EEIGKLLCK SFP S PL+ 
Sbjct: 1065 SPSQLQEVALEAIINFCRQPSFIVEMYVNYDCDPICRNIFEEIGKLLCKLSFPGSSPLSY 1124

Query: 434  SQIQAFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRL 493
             QIQAFEGL+I+IHNIA++IDK+ D+SPSGPYPV+ITEY PFWEEKP +D +TWVEY+RL
Sbjct: 1125 VQIQAFEGLLIIIHNIADNIDKDDDSSPSGPYPVKITEYIPFWEEKPKEDFETWVEYLRL 1184

Query: 494  RKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYL 553
            RKAQKRK LIAG+HFNRDEKKGLEYL+LCQLVSDP DPKA A FFRFT GLDK+MIGDYL
Sbjct: 1185 RKAQKRKVLIAGDHFNRDEKKGLEYLRLCQLVSDPADPKAFAIFFRFTPGLDKSMIGDYL 1244

Query: 554  GDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQ 613
            GD DEFH+ VLKEFTETF F+GM LDNALRTYL TFRLPGESQKIQRILEAFS+RF+DQQ
Sbjct: 1245 GDPDEFHMLVLKEFTETFRFSGMILDNALRTYLATFRLPGESQKIQRILEAFSERFYDQQ 1304

Query: 614  TSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSEL 673
            +S+IF +KD+V+I CYSLIMLNTDQHNPQVKKKMTEEEFIRNNR INGG+DLPR+YLSEL
Sbjct: 1305 SSDIFASKDAVFILCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRAINGGQDLPRDYLSEL 1364

Query: 674  FHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPA 733
            F SIA++AI++FGQSG  V+MNP  WIEL+NRS+ M PFIL D+DRR+GRDMFA IAGP+
Sbjct: 1365 FQSIAAHAITLFGQSGP-VEMNPGSWIELMNRSRVMQPFILGDYDRRIGRDMFACIAGPS 1423

Query: 734  VAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNPYATAE 793
            +AALS+FF+HADED+ML ECI GL+S++RI QY LED LDELLASF KFTTLLNPYA+AE
Sbjct: 1424 IAALSSFFEHADEDEMLHECIGGLVSVARITQYELEDILDELLASFSKFTTLLNPYASAE 1483

Query: 794  ETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLKLKRLKLLPQSVIEFD-- 851
            ETLFAFSND+KP+MATLAVFT+ANNFG+SIR GWRNIVDCLLKLKRLKLLPQSV+EFD  
Sbjct: 1484 ETLFAFSNDLKPRMATLAVFTIANNFGDSIRGGWRNIVDCLLKLKRLKLLPQSVVEFDDT 1543

Query: 852  -ISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEFEQ 910
              S++D P H R ES +   ++DP  GNRRS+GM++RF+ FL+++S EDSISLGM+EFEQ
Sbjct: 1544 SASSSDVPGHKRNESSISL-SHDPKFGNRRSAGMMNRFSPFLTIESMEDSISLGMSEFEQ 1602

Query: 911  NLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLI 970
            NLKVIKQC+IG+IF+NS NLP + L NLGRSLIFAA GKGQKFSTP+EEEETVGF WDLI
Sbjct: 1603 NLKVIKQCRIGSIFTNSINLPDDGLLNLGRSLIFAAGGKGQKFSTPIEEEETVGFAWDLI 1662

Query: 971  IAIAIANNNRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKL 1030
            +A+++ N +RF  FWPSFHD LL V QFPLFSP+PFAEKA++GLFK+C++LLSS ++++L
Sbjct: 1663 VAVSMVNMHRFLNFWPSFHDNLLGVAQFPLFSPVPFAEKAILGLFKICVKLLSSNRTERL 1722

Query: 1031 PEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVTGR 1090
            PEELIFKSINLMWKLDKEILDTC + IT+SVSKI+ +YPANLQ+++GWK+ LHLLSVTGR
Sbjct: 1723 PEELIFKSINLMWKLDKEILDTCCESITKSVSKILTDYPANLQTSLGWKTCLHLLSVTGR 1782

Query: 1091 HPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVN 1150
            HP+T++Q V+TLI ++SDGTH+S+  YAYCIDCAF ++ALKNSPLEKNLKIL+LL+DSVN
Sbjct: 1783 HPETYDQGVDTLIQMVSDGTHVSRMNYAYCIDCAFGYIALKNSPLEKNLKILELLADSVN 1842

Query: 1151 LLIQWYKNAWSESGNNYSIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTSLARRE 1210
            LLIQWYK  ++++G+NYSI SSTS SS ED KGL S NFA+ LF+KLGEA RKTSLARRE
Sbjct: 1843 LLIQWYKE-YADTGSNYSITSSTSNSSFEDSKGLGSPNFAITLFVKLGEAFRKTSLARRE 1901

Query: 1211 EIRNHAVLALQKCFTLAEDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMR 1270
            EIRN A+L+LQK F+L+++LDFS +NCI+CFNLVIFAM DDLHEKMIEYSRRENAEREMR
Sbjct: 1902 EIRNQAILSLQKSFSLSKELDFSPLNCISCFNLVIFAMADDLHEKMIEYSRRENAEREMR 1961

Query: 1271 SMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETKLQET 1330
            SMEGTLK AMELL +V+L+F+K I  SPGFRTFWLGVLRRMDTCMKADLG YGET+LQE 
Sbjct: 1962 SMEGTLKLAMELLTDVYLKFLKPITMSPGFRTFWLGVLRRMDTCMKADLGEYGETRLQEV 2021

Query: 1331 IPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDE 1379
            IPDLLR +IT MKE EIL P ED+DLW+ITYIQIQWIAP LKEELFP+E
Sbjct: 2022 IPDLLRRIITKMKEEEILVPTEDDDLWDITYIQIQWIAPFLKEELFPEE 2070

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225445282|ref|XP_002281184.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443323|ref|XP_004139429.1| PREDICTED: pattern formation protein EMB30-like [Cucumis sativus] gi|449517299|ref|XP_004165683.1| PREDICTED: pattern formation protein EMB30-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224143498|ref|XP_002324976.1| predicted protein [Populus trichocarpa] gi|222866410|gb|EEF03541.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147852831|emb|CAN79521.1| hypothetical protein VITISV_034627 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297812145|ref|XP_002873956.1| sec7 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319793|gb|EFH50215.1| sec7 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15241142|ref|NP_197462.1| protein GNOM-like 2 [Arabidopsis thaliana] gi|449061824|sp|F4K2K3.1|GNL2_ARATH RecName: Full=ARF guanine-nucleotide exchange factor GNL2; AltName: Full=Protein GNOM-like 2 gi|332005347|gb|AED92730.1| protein GNOM-like 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357500447|ref|XP_003620512.1| Pattern formation protein EMB30 [Medicago truncatula] gi|355495527|gb|AES76730.1| Pattern formation protein EMB30 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356529612|ref|XP_003533383.1| PREDICTED: pattern formation protein EMB30-like [Glycine max] Back     alignment and taxonomy information
>gi|326533458|dbj|BAK05260.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1380
TAIR|locus:21831591375 GNL2 "AT5G19610" [Arabidopsis 0.974 0.978 0.680 0.0
TAIR|locus:20358531451 GN "AT1G13980" [Arabidopsis th 0.718 0.683 0.441 3.29999999993e-314
TAIR|locus:21757281443 GNL1 "AT5G39500" [Arabidopsis 0.663 0.634 0.408 1.4e-272
UNIPROTKB|Q75H951175 OSJNBa0056E06.17 "Pattern form 0.743 0.873 0.426 1.9e-258
UNIPROTKB|Q0E1L7996 Os02g0326600 "Os02g0326600 pro 0.589 0.816 0.399 1.6e-193
UNIPROTKB|Q92538 1859 GBF1 "Golgi-specific brefeldin 0.407 0.302 0.325 2.2e-120
UNIPROTKB|E1BMC4 1861 GBF1 "Uncharacterized protein" 0.407 0.301 0.320 2e-117
UNIPROTKB|F1PB51 1857 GBF1 "Uncharacterized protein" 0.407 0.302 0.316 2.2e-117
UNIPROTKB|F1S8S9 1865 GBF1 "Uncharacterized protein" 0.407 0.301 0.320 6.3e-117
RGD|1307160 1807 Gbf1 "golgi brefeldin A resist 0.407 0.311 0.316 1e-116
TAIR|locus:2183159 GNL2 "AT5G19610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4863 (1716.9 bits), Expect = 0., P = 0.
 Identities = 934/1373 (68%), Positives = 1123/1373 (81%)

Query:    27 KRKQLGLSCMLNTEVGSVLAVIRRPLDAHYV--QE-DTFESAVVQSLKSLRSLIFNPQQE 83
             KRK+LG+SCMLNTEVG+VLAVIRRPL   Y+  QE D  +S+V QSLKSLR+LIFNPQQ+
Sbjct:     9 KRKELGISCMLNTEVGAVLAVIRRPLSESYLSPQETDHCDSSVQQSLKSLRALIFNPQQD 68

Query:    84 WRTVDPSIYLSPFLDVVQSDDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTG 143
             WRT+DPS+YLSPFL+V+QSD+IPA+AT VALS+ILKILK+EIFDEKTPG KDA+N +V+G
Sbjct:    69 WRTIDPSVYLSPFLEVIQSDEIPASATAVALSSILKILKIEIFDEKTPGAKDAMNSIVSG 128

Query:   144 ITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTDEAVCTIVNTCFHVVQQSASRG 203
             ITSC+LEKTD +SEDAVMMRILQVL  IM+H +S LL D+AVCTIVNTCF VVQQS  RG
Sbjct:   129 ITSCRLEKTDLVSEDAVMMRILQVLTGIMKHPSSELLEDQAVCTIVNTCFQVVQQSTGRG 188

Query:   204 DLLQRSARYTMHELIQIIFSRLPDIEVKSGEG---SESDTEDVDMDANLGSGYGIRSAVD 260
             DLLQR+ RYTMHELIQIIFSRLPD EV+  EG   SESDT+++DM      GYGIR  +D
Sbjct:   189 DLLQRNGRYTMHELIQIIFSRLPDFEVRGDEGGEDSESDTDEIDMSG----GYGIRCCID 244

Query:   261 IFHFLCSLLNVVELVEG-EGSR--TSDVDVQLFALVLINSAIELSGDAIGKHPKLLRMVQ 317
             IFHFLCSLLNVVE+VE  EG+   T+D DVQ+FALVLINSAIELSGDAIG+HPKLLRMVQ
Sbjct:   245 IFHFLCSLLNVVEVVENLEGTNVHTADEDVQIFALVLINSAIELSGDAIGQHPKLLRMVQ 304

Query:   318 DDLFHHLIHYGARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAFFGFVVLRVAASGNSHQ 377
             DDLFHHLIHYGA SSPLVLSMICS +LNIYHFLR+F+RLQLEAFF FV+LRV A      
Sbjct:   305 DDLFHHLIHYGASSSPLVLSMICSCILNIYHFLRKFMRLQLEAFFSFVLLRVTAFTGFLP 364

Query:   378 LQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQ 437
             LQEVALEG+INFCRQP F++E YVNYDCDP+CRN+ EE GK+LC+H+FP SGPLTS QIQ
Sbjct:   365 LQEVALEGLINFCRQPAFIVEAYVNYDCDPMCRNIFEETGKVLCRHTFPTSGPLTSIQIQ 424

Query:   438 AFEGLVILIHNIAESIDKEGD---------TSPSGPYPVEITEYKPFWEEKPNDDSDTWV 488
             AFEGLVILIHNIA+++D+E D         ++   P PVEI EY PFW +KP +D +TWV
Sbjct:   425 AFEGLVILIHNIADNMDREEDEGNEEDDNNSNVIKPSPVEIHEYIPFWIDKPKEDFETWV 484

Query:   489 EYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNM 548
             +++R+RKAQKRK  IA NHFNRDEKKGLEYLK   LVSDP DP ALA FFRFT GLDK M
Sbjct:   485 DHIRVRKAQKRKLAIAANHFNRDEKKGLEYLKYNYLVSDPLDPMALASFFRFTPGLDKTM 544

Query:   549 IGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDR 608
             IGDYLGD DE H+ VL+ FT TFEF GM LD ALRT+LE+FRLPGESQKI+R++EAFS+R
Sbjct:   545 IGDYLGDPDELHLSVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFSER 604

Query:   609 FFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPRE 668
             F+DQQ+S+IF +KD+V+I CYSLIMLNTDQHNPQV++KMTE+EFIRNNR IN G DLP+E
Sbjct:   605 FYDQQSSDIFASKDTVHILCYSLIMLNTDQHNPQVRRKMTEDEFIRNNRAINAGNDLPKE 664

Query:   669 YLSELFHSIASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFAS 728
             YLSELF SIA+NA ++   SG  V+MNP+RWIEL+NR+KT  PF LC FDRR+GRDMFA+
Sbjct:   665 YLSELFQSIATNAFALSTHSGP-VEMNPNRWIELMNRTKTTQPFSLCQFDRRIGRDMFAT 723

Query:   729 IAGPAVAALSAFFDHADEDDMLQECIEGLISISRIAQYGLEDTLDELLASFCKFTTLLNP 788
             IAGP++AA+SAFF+H+D+D++L EC++ +ISI+R+AQYGLED LDEL+ASFCKFTTLLNP
Sbjct:   724 IAGPSIAAVSAFFEHSDDDEVLHECVDAMISIARVAQYGLEDILDELIASFCKFTTLLNP 783

Query:   789 YATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCXXXXXXXXXXPQSVI 848
             Y T EETLFAFS+DMKP+MATLAVFTLAN FG+SIR GWRNIVDC          PQSVI
Sbjct:   784 YTTPEETLFAFSHDMKPRMATLAVFTLANTFGDSIRGGWRNIVDCLLKLRKLQLLPQSVI 843

Query:   849 EFDISTTDAPSHSRAESGVVFPAYDPTSGNRRSSGMISRFTHFLSLDSPEDSISLGMNEF 908
             EF+I+  +  S S   +     + D     R+ S ++ RF+HFL+LD+ E+S++LGM+EF
Sbjct:   844 EFEINEENGGSESDMNN---VSSQDTKFNRRQGSSLMGRFSHFLALDNVEESVALGMSEF 900

Query:   909 EQNLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWD 968
             EQNLKVIKQC+IG IFS S+ LP  A+ NLGRSLI+AAAGKGQKFST +EEEETV FCWD
Sbjct:   901 EQNLKVIKQCRIGQIFSKSSVLPDVAVLNLGRSLIYAAAGKGQKFSTAIEEEETVKFCWD 960

Query:   969 LXXXXXXXXXXRFQAFWPSFHDYLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSD 1028
             L          RF  FWPS+H+YLL V  FPLFSPIPF EK + GLF+VC+++L+S   D
Sbjct:   961 LIITIALSNVHRFNMFWPSYHEYLLNVANFPLFSPIPFVEKGLPGLFRVCIKILASNLQD 1020

Query:  1029 KLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPANLQSAVGWKSVLHLLSVT 1088
              LPEELIF+S+ +MWK+DKEI++TC   IT+ VSKIII+Y ANL + +GWKSVL LLS+ 
Sbjct:  1021 HLPEELIFRSLTIMWKIDKEIIETCYDTITEFVSKIIIDYSANLHTNIGWKSVLQLLSLC 1080

Query:  1089 GRHPDTHEQAVETLIMLIS-DGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSD 1147
             GRHP+T EQAV+ LI L+S + +H+S+++YAYCIDCAFSFVAL+NS +EKNLKILDL++D
Sbjct:  1081 GRHPETKEQAVDALIGLMSFNASHLSQSSYAYCIDCAFSFVALRNSSVEKNLKILDLMAD 1140

Query:  1148 SVNLLIQWYKNAWSESGNNYSIAXXXXXXXLEDYKGLNSLNFAVNLFIKLGEALRKTSLA 1207
             SV +L++WYK A +++ N+YS A         +   L  +NF  +LF+KL EA RKT+LA
Sbjct:  1141 SVTMLVKWYKTASTDTANSYSPASNTSSSSSMEENNLRGVNFVHHLFLKLSEAFRKTTLA 1200

Query:  1208 RREEIRNHAVLALQKCFTLA-EDLDFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAE 1266
             RREEIRN AV +L+K FT+  EDL F+   CI C + VIF  +DDLHEK+++YSRRENAE
Sbjct:  1201 RREEIRNRAVTSLEKSFTMGHEDLGFTPSGCIYCIDHVIFPTIDDLHEKLLDYSRRENAE 1260

Query:  1267 REMRSMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVLRRMDTCMKADLGPYGETK 1326
             REMRSMEGTLK AM++L NVFL +++QI ES  FRTFWLGVLRRMDTCMKADLG YG+ K
Sbjct:  1261 REMRSMEGTLKIAMKVLMNVFLVYLEQIVESAEFRTFWLGVLRRMDTCMKADLGEYGDNK 1320

Query:  1327 LQETIPDLLRNMITMMKEREILAPKEDEDLWEITYIQIQWIAPSLKEELFPDE 1379
             LQE +P+LL  MI  MKE+EIL  KED+DLWEITYIQIQWIAP+LK+ELFPDE
Sbjct:  1321 LQEVVPELLTTMIGTMKEKEILVQKEDDDLWEITYIQIQWIAPALKDELFPDE 1373
GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA;ISS;IBA
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IBA
GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA
GO:0050790 "regulation of catalytic activity" evidence=IBA
GO:0009846 "pollen germination" evidence=IMP
GO:0090406 "pollen tube" evidence=IDA
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2035853 GN "AT1G13980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175728 GNL1 "AT5G39500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q75H95 OSJNBa0056E06.17 "Pattern formation protein EMB30, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q0E1L7 Os02g0326600 "Os02g0326600 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q92538 GBF1 "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMC4 GBF1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PB51 GBF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S8S9 GBF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307160 Gbf1 "golgi brefeldin A resistant guanine nucleotide exchange factor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4K2K3GNL2_ARATHNo assigned EC number0.68940.97600.9796yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016764001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (1376 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1380
pfam01369188 pfam01369, Sec7, Sec7 domain 1e-75
cd00171185 cd00171, Sec7, Sec7 domain; Domain named after the 2e-75
PLN03076 1780 PLN03076, PLN03076, ARF guanine nucleotide exchang 6e-65
smart00222189 smart00222, Sec7, Sec7 domain 2e-63
COG53071024 COG5307, COG5307, SEC7 domain proteins [General fu 1e-57
pfam12783166 pfam12783, Sec7_N, Guanine nucleotide exchange fac 4e-41
>gnl|CDD|216460 pfam01369, Sec7, Sec7 domain Back     alignment and domain information 
 Score =  248 bits (635), Expect = 1e-75
 Identities = 100/187 (53%), Positives = 132/187 (70%), Gaps = 1/187 (0%)

Query: 494 RKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYL 553
           +K +K+      + FN+  KKG+EYL    L+ D  DPK +A F R T GLDK  IG+YL
Sbjct: 1   QKQRKKLLEEGISKFNKKPKKGIEYLIENGLI-DEDDPKEIAKFLRETPGLDKKAIGEYL 59

Query: 554 GDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQ 613
           G  D F+ +VLKE+ + F+F G+ LD ALR +L +FRLPGE+QKI RILEAFS+R+++  
Sbjct: 60  GKNDPFNRKVLKEYVDLFDFKGLPLDEALRLFLSSFRLPGEAQKIDRILEAFSERYYECN 119

Query: 614 TSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSEL 673
            S +F + D+VYI  YS+IMLNTD HNP VK KMT+E+FI+N RGIN GKD P E+L E+
Sbjct: 120 PSTVFKSADAVYILAYSIIMLNTDLHNPNVKNKMTKEDFIKNLRGINDGKDFPEEFLEEI 179

Query: 674 FHSIASN 680
           + SI S 
Sbjct: 180 YDSIKSE 186

The Sec7 domain is a guanine-nucleotide-exchange-factor (GEF) for the pfam00025 family. Length = 188
>gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S Back     alignment and domain information
>gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>gnl|CDD|214569 smart00222, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1380
KOG09281386 consensus Pattern-formation protein/guanine nucleo 100.0
PLN03076 1780 ARF guanine nucleotide exchange factor (ARF-GEF); 100.0
KOG0929 1514 consensus Guanine nucleotide exchange factor [Intr 100.0
COG53071024 SEC7 domain proteins [General function prediction 100.0
KOG1848 1610 consensus Uncharacterized conserved protein [Funct 100.0
KOG0930395 consensus Guanine nucleotide exchange factor Cytoh 100.0
cd00171185 Sec7 Sec7 domain; Domain named after the S. cerevi 100.0
PF01369190 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do 100.0
smart00222187 Sec7 Sec7 domain. Domain named after the S. cerevi 100.0
KOG0931627 consensus Predicted guanine nucleotide exchange fa 100.0
PF12783168 Sec7_N: Guanine nucleotide exchange factor in Golg 99.96
KOG0932774 consensus Guanine nucleotide exchange factor EFA6 99.95
KOG1846 1777 consensus Uncharacterized conserved protein, conta 98.91
PF0932486 DUF1981: Domain of unknown function (DUF1981); Int 98.81
PLN030761780 ARF guanine nucleotide exchange factor (ARF-GEF); 93.73
KOG18241233 consensus TATA-binding protein-interacting protein 84.49
>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=2e-229  Score=2092.76  Aligned_cols=1286  Identities=43%  Similarity=0.709  Sum_probs=1156.8

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHhcCCCC--CCc-cccccccHHHHHHHHHHHHhcCCcCCCccCCcccchHHHHHHhcC
Q 000634           26 YKRKQLGLSCMLNTEVGSVLAVIRRPLDA--HYV-QEDTFESAVVQSLKSLRSLIFNPQQEWRTVDPSIYLSPFLDVVQS  102 (1380)
Q Consensus        26 ~~~~~~~~~~~~~~E~~~v~~~~rr~~r~--~~~-~~~~~~~~l~~~~~~Lr~~l~~~~~~~~~~~~~~~l~PFL~vi~s  102 (1380)
                      +|++....+||++.|+++++++||||.||  ++. ..+...+||+++|++||+.|.++ ++|+.+||.+||+|||+||+|
T Consensus         2 ~k~~~~~~~~~in~~vg~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~f~~Lr~~ln~~-~~l~~idp~~~L~PFL~vI~s   80 (1386)
T KOG0928|consen    2 RKTSRYISQGMINILVGAVLAVFRRNDRWSVRSFTNLDTSSHSLLSSFKQLREVLNSL-ASLDTIDPLTYLSPFLEVIKS   80 (1386)
T ss_pred             CcccchhhhhhhHHHHhHHHHHHHhccchhhccCCCCcccchHHHHHHHHHHHHhhch-hhhccCChHhHHhHHHHHHhc
Confidence            36677889999999999999999999999  433 56677899999999999988888 569999999999999999999


Q ss_pred             CCCCcchHHHHHHHHHHHHccCCCCCCCcChHHHHHHHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHcccCccccCc
Q 000634          103 DDIPAAATGVALSAILKILKLEIFDEKTPGVKDAINIVVTGITSCQLEKTDPISEDAVMMRILQVLIAIMRHRASILLTD  182 (1380)
Q Consensus       103 ~~~~~~it~~AL~sl~k~l~~~~i~~~~~~~~~a~~~i~~av~~crfe~td~~~De~VllkILq~L~~ll~~~~g~~l~~  182 (1380)
                      ++|+||||++||+||+||+++++|+++++|++.||+.+++||||||||+||+++||+|+|||||||++||.+|+|.+|+|
T Consensus        81 ~~~~g~iTslALssv~Kflt~~iid~~s~n~~~am~~~v~AvthcRFe~td~~Sde~VllkilqvLr~lm~sp~~~lLSn  160 (1386)
T KOG0928|consen   81 DETTGPITSLALSSVLKFLTLNIIDESSPNAADAMRNIVDAVTHCRFEGTDPASDEVVLLKILQVLRSLMDSPAGALLSN  160 (1386)
T ss_pred             ccCCccHHHHHHHHHHHHheeeecCccCccHHHHHHHHHHHHHheeeeccCccchhHHHHHHHHHHHHHHhCchhhhcch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHccCCccccccC-C------------------C------CC
Q 000634          183 EAVCTIVNTCFHVVQQSASRGDLLQRSARYTMHELIQIIFSRLPDIEVKSG-E------------------G------SE  237 (1380)
Q Consensus       183 ~~v~~~l~~C~~l~~q~~~~s~~lr~tA~~tl~q~v~~vF~rl~~~~~~~~-~------------------~------~~  237 (1380)
                      +.||++|+||||+|||+ ++|++||++|++||.+|++.||+|++.+++.-. +                  +      .+
T Consensus       161 q~Ic~ivqTcl~v~~q~-~lselLr~~Ae~Tm~~~~~~IFsrLk~~~~~~~~~~~~~~es~~~~~~~~~~i~~k~~en~e  239 (1386)
T KOG0928|consen  161 QIICDIVQTCLRVVCQS-RLSELLRKSAEHTMHDLTQLIFSRLKYIEPPYVNEMYINDESYQGNVLKDDFIGTKRVENGE  239 (1386)
T ss_pred             hHHHHHHHHHHHHHHHH-hHHHHhhcchhhhHHHHHHHHHHhCccccccccchhhcchHhhhcccccccccCcccCCCCC
Confidence            99999999999999998 899999999999999999999999999883110 0                  0      00


Q ss_pred             CCC--C----Cc--------------c-----------ccCccCCCcchhhHHHHHHHHHhhcccccccCCCCCCCccch
Q 000634          238 SDT--E----DV--------------D-----------MDANLGSGYGIRSAVDIFHFLCSLLNVVELVEGEGSRTSDVD  286 (1380)
Q Consensus       238 ~~~--~----~~--------------~-----------~~~~~~~~~g~~~~~~lf~~Lc~L~~~~~~~~~~~~~~~~~~  286 (1380)
                      .+.  +    ++              +           ....+..+||+|+..++|++||+|+++...      ..++++
T Consensus       240 ~~~~~~~a~~~~~~~~~~~~~~v~~~~~~~~~~~e~a~~~~~~~~~ygip~~~~~~h~l~sl~~~~n~------~~~~es  313 (1386)
T KOG0928|consen  240 ISSEDESATFDDGSISEKFEVPVQQVDREQETDEENAEAMAAMDENYGIPVMKDIFHFLLSLLNVTNT------VAHDES  313 (1386)
T ss_pred             ccCcccccccccccccccccCCccccccccCChhhhhhHhhcccccCCCceeccchhhhhhhcccccc------ccchhh
Confidence            000  0    00              0           012356799999999999999999987432      467789


Q ss_pred             hhHHHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhh-----ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000634          287 VQLFALVLINSAIELSGDAIGKHPKLLRMVQDDLFHHLIHYG-----ARSSPLVLSMICSTVLNIYHFLRRFIRLQLEAF  361 (1380)
Q Consensus       287 ~~~~~L~Li~~~le~~g~~~~~~p~l~~li~~~Lc~~Ll~~~-----~s~~~~~~~~~lri~~~L~~~lr~~Lk~qlE~f  361 (1380)
                      +++++|.||++++|.+|+.|+.||.|+.+++|+++++++..+     .+..+.++++.+.++.+|+..+|.++|.|+|.|
T Consensus       314 ~~~~~l~lin~aie~~g~~i~~~prll~liqd~~fk~l~~~~~~~~k~s~~~~~Lql~~s~vl~l~~~lr~~~k~qle~~  393 (1386)
T KOG0928|consen  314 VRSFALVLINSAIELGGDCIREHPRLLRLIQDPLFKHLIEFLQIPTKMSLERLVLQLFCSLVLNLYLALREQLKLQLEAF  393 (1386)
T ss_pred             hhHHHHHHHHhhHhhcchHHHHhhHHHHHhccHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence            999999999999999999999999999999999999999999     667788999999999999999999999999999


Q ss_pred             HHHHHHHhcC--CCCCHHHHHHHHHHHHHHhcCchHHHHHhHhcCCCCCCccHHHHHHHHHHhhcCCCCCCCchhHHH--
Q 000634          362 FGFVVLRVAA--SGNSHQLQEVALEGIINFCRQPTFLIEVYVNYDCDPLCRNVIEEIGKLLCKHSFPVSGPLTSSQIQ--  437 (1380)
Q Consensus       362 l~~l~~~i~~--~~~~~~~r~l~LE~l~~l~~~p~~~~~ly~nYDCd~~~~nlfe~lv~~L~k~a~~~~~~~~~~~~l--  437 (1380)
                      |+.+..++..  .++|+++||++||++..|||.|.|++++|+|||||++|+||||++++.|+|++||+++++++.+++  
T Consensus       394 Fs~l~~~~~~~~~~~~~~~~e~ale~lv~~~R~p~F~~e~yvNfDCd~~csnlfedl~k~LtknafP~sg~~tt~~i~~l  473 (1386)
T KOG0928|consen  394 FSILLLRGTAEEYGPPYEQQEVALEALVLLCRIPSFLTEMYVNFDCDLYCSNLFEDLIKLLTKNAFPVSGPLTTASILPL  473 (1386)
T ss_pred             HHHHHHHHHhcccCCchHHHHHHHHHHHHHHhccHHHHHHHHhcCCchhhhhhHHHHHHHHHHccCCcccccccccccch
Confidence            9999988876  556899999999999999999999999999999999999999999999999999999999988874  


Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCCCCCCCCcccccCCCccCCCCCCCcchHHHHHHHHHHhhhHHHHHHhhcccChHhHHH
Q 000634          438 AFEGLVILIHNIAESIDKEGDTSPSGPYPVEITEYKPFWEEKPNDDSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLE  517 (1380)
Q Consensus       438 ~Le~l~~ii~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~K~~l~~~~~~Fn~~pk~gi~  517 (1380)
                      |++++.+++..+.+.....+              -.++|..+++    .|+..+|.+| +|++++.|+++||++|||||+
T Consensus       474 ~l~~v~~l~e~~~~~l~~~d--------------~~ef~~~k~e----~~v~~iR~rk-~K~~li~gae~FNe~pkKGi~  534 (1386)
T KOG0928|consen  474 DLEGVLGLAENMIDELQDSD--------------REEFWTDKCE----VWVLFIRSRK-RKRELILGAELFNEDPKKGIE  534 (1386)
T ss_pred             HHHHHHHHHHHHHhhccccC--------------cCccccCCcc----hhhhhhccch-hhHHHHHHHHHhccChhhHHH
Confidence            55555555555554332211              1456665553    5676677666 799999999999999999999


Q ss_pred             HHHHCCCCCCCCCHHHHHHHHHhhcCCChHHHhhhccCChhhhHHHHHHHHhccCCCCCChHHHHHHHhccccCCCchhH
Q 000634          518 YLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQK  597 (1380)
Q Consensus       518 ~l~~~~~~~~~~~p~~ia~fl~~~~~l~k~~igeyL~~~~~~~~~vL~~f~~~fdf~~~~~~~aLR~fl~~frlPgEaq~  597 (1380)
                      ||+++|+|+++.||..+|.|||+||||||++||+|||+++  |.+||++|+++|||+||++|+|||.||++||||||||+
T Consensus       535 fL~ek~li~~~~d~~~~~~ffr~n~rLdKk~iGdfLc~~k--~~~vLn~Fi~tFdF~gmrlDeALRl~L~sFRLPGESQ~  612 (1386)
T KOG0928|consen  535 FLQEKGLIPSDLDPTSVAEFFRYNPRLDKKTIGDFLCDPK--NVSVLNEFIGTFDFQGMRLDEALRLFLESFRLPGESQK  612 (1386)
T ss_pred             HHHhcCccCCCCChHHHHHHHHhCccccHHHHHHHhcCcc--hHHHHHHHHHhcCcCCCcHHHHHHHHHHHcCCCCcHHH
Confidence            9999999999999999999999999999999999999999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCcCCCChHHHHHHHHHHhhccCCCccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHHh
Q 000634          598 IQRILEAFSDRFFDQQTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSI  677 (1380)
Q Consensus       598 Idri~e~Fa~~y~~~~~~~~~~~~d~~~~l~ysiimLntdlhn~~vk~~mt~~~F~~n~rg~~~g~d~~~~~L~~iY~~I  677 (1380)
                      |+|++|+||++||++|+|++|+++|+||+|+|||||||||+||||||++||++||+||+||+|+|+|||+|||.+||++|
T Consensus       613 IeRVlEAFSery~~~n~~~~~~~kDavFvLsYSIIMLNTDqHNpqVK~~MT~dDf~rNlrg~n~g~DFpreyLseiY~SI  692 (1386)
T KOG0928|consen  613 IERVLEAFSERYYSDNSPDIFADKDAVFVLSYSIIMLNTDQHNPQVKRKMTFDDFIRNLRGINGGKDFPREYLSEIYQSI  692 (1386)
T ss_pred             HHHHHHHHHHHHHhcCCCccccccchhhhhhhhhheecccccChhhhccCCHHHHhhhcccccCCCCCCHHHHHHHHHHH
Confidence            99999999999999777799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCcccccCCCCcccCCChhHHHHHHHhhccCCcceeccccccchhhhhhhhhHhHHHHHHHHHhhcCcHHHHHHHHHHH
Q 000634          678 ASNAISVFGQSGQIVDMNPSRWIELINRSKTMLPFILCDFDRRLGRDMFASIAGPAVAALSAFFDHADEDDMLQECIEGL  757 (1380)
Q Consensus       678 ~~~~i~~~~~~~~~~~~~~~~w~~l~~~s~~~~~~~~~~~~~~~~~~mf~~~w~~~laals~~f~~~~d~~~~~~~l~g~  757 (1380)
                      |.+||+||++|++..++.+++|..++.|++++.|++.+++...+|++||..+|||++||++++|+.+++++++++|++|+
T Consensus       693 k~~EIvmPee~hG~~~~~~~~W~~L~~~sktt~~~~~~~~~~~~drdlF~~v~gp~iaals~vFd~a~~d~I~~r~i~g~  772 (1386)
T KOG0928|consen  693 KTNEIVMPEEHHGTEEMFEYRWINLISRSKTTEPFILRDFTLVYDRDLFAMVWGPIIAALSYVFDVAESDTILQRCIDGI  772 (1386)
T ss_pred             hhcceecccccCCchhhhHHHHHHHHhcccccCceeeccchhhhhHHHHHHHccchHHHHHHHhchhhHHHHHHHHHHHH
Confidence            99999999998888888899999999999999999999998899999999999999999999999999999999999999


Q ss_pred             HHHHHHh-hcCCchHHHHHHHHHHhhccCCCCCcchhhhhhccccCchhHHHHHHHHHHHhhcCCchhhcHHHHHHHHHH
Q 000634          758 ISISRIA-QYGLEDTLDELLASFCKFTTLLNPYATAEETLFAFSNDMKPKMATLAVFTLANNFGNSIRAGWRNIVDCLLK  836 (1380)
Q Consensus       758 ~~~a~ia-~~~l~~~~d~~v~~L~k~t~l~~~~~~~~~~~~~~g~~~K~~la~~~l~~ia~~~g~~l~~sW~~il~~l~~  836 (1380)
                      ++||.|+ +||+.+++|.++.+|||||+|.+|+.++++.+..||.|.|+++|+.++|.+++++|++++.+|++|++|+.+
T Consensus       773 ~k~a~isA~y~l~dv~ddli~slCkfTtL~~~s~~~eel~~~fged~ka~~At~tvf~~~n~~Gd~i~~gw~nI~~~~l~  852 (1386)
T KOG0928|consen  773 RKCAKISAYYGLKDVFDDLIISLCKFTTLLNPSSTPEELVLAFGEDTKARMATLTVFFGANKFGDLIRVGWRNIVECLLQ  852 (1386)
T ss_pred             HHHHHHHHHhhhhhhhHHHHHHHhccccccCCccCchHHHHHhcccchhHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            9999999 999999999999999999999999878899999999999999999999999999999999999999999999


Q ss_pred             HHHcccCCCCcccccCCCCCCCCCCcccCCcccC-CCCCCCCC-CCCCCccccccccccCCCCCcccccc----hhhHhH
Q 000634          837 LKRLKLLPQSVIEFDISTTDAPSHSRAESGVVFP-AYDPTSGN-RRSSGMISRFTHFLSLDSPEDSISLG----MNEFEQ  910 (1380)
Q Consensus       837 l~~~~llp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~s~l~s~~~s~l~~~~~~~~~~~~----~~e~~~  910 (1380)
                      |+++.|+|..+.+.....+.    . .+.+.++. +++.+.++ +.++|++|+|++||++++.+++ +.|    ++...+
T Consensus       853 l~r~~llp~~~~e~~~~~~~----~-~~~~~~~~~~~~~~~~k~~~ss~Lls~fs~~Ls~d~e~~~-~~Ptee~l~~~~~  926 (1386)
T KOG0928|consen  853 LNRLVLLPLRLIEDLKNEPE----L-LKLNKLPVPQQEISINKPRKSSGLLSRFSSYLSGDEEEER-PCPTEEELSASKK  926 (1386)
T ss_pred             HHhhccCcHhhhhhhhcCcc----c-cccCCCCCCccccCcccccccchHHHHHHHhcCCcccccC-CCCcHHHHhhhHH
Confidence            99999999998874433221    1 11233332 23344444 7899999999999999876543 233    223456


Q ss_pred             HHHHHHhhhhhhhhhhcCCCCHHHHHHHHHHHHHHhcccCCccCCCCccccchhhHHHHHHHHHhhchhhhhhhHHHHHH
Q 000634          911 NLKVIKQCQIGNIFSNSTNLPLEALQNLGRSLIFAAAGKGQKFSTPVEEEETVGFCWDLIIAIAIANNNRFQAFWPSFHD  990 (1380)
Q Consensus       911 al~~i~~~~i~~LF~~s~~L~~esl~~fv~AL~~ls~~~~~~~~~s~~~e~~~~F~Leklv~V~l~N~~Ri~~~W~~v~~  990 (1380)
                      |++||++|+++++|+++++|+.+++.+++++|+..+...      +.++|+..+||+|+|+.|.+.|+||+..+|+.+++
T Consensus       927 a~~cIk~c~i~~if~~s~~l~~~~l~~Ll~Sli~~s~~~------s~~de~s~~F~lElli~I~l~nrdri~l~w~~~~e 1000 (1386)
T KOG0928|consen  927 ALECIKECHIDQIFTKSKFLQAKSLLTLLKSLIAASNDL------SMEDEESAVFCLELLIAITLSNRDRILLSWFAVYE 1000 (1386)
T ss_pred             HhhHHHhcCHHHHhhhcccccHHHHHHHHHHHHHhcCCc------cCcccchHHHHHHHHHHHHhccccceEeeehhhHH
Confidence            889999999999999999999999999999999998421      45678899999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhccCCCcchhHHHHHhHHHHhccCHHHHHHHHHHHHHHHHHHHhhCCC
Q 000634          991 YLLLVTQFPLFSPIPFAEKAMVGLFKVCLRLLSSYQSDKLPEELIFKSINLMWKLDKEILDTCSQLITQSVSKIIIEYPA 1070 (1380)
Q Consensus       991 hL~~v~~~~~~~~~~l~~rAv~~LlrL~~~lL~~~~~e~l~~~ll~~sL~~L~~l~~~~~~~v~~~il~~L~~ll~~~~~ 1070 (1380)
                      |+..++..+...++.++++|+.|++|+|.|++.  |++.+.++++ ++++.++++++.+.+.+.++|...+.+++.++.+
T Consensus      1001 ~ll~~~~~~~~~~~~lvek~v~gl~rv~~rll~--yk~~l~d~l~-~sl~~ll~L~~ki~d~~~~ki~i~~~~lv~~n~~ 1077 (1386)
T KOG0928|consen 1001 HLLGLLIQTLMGSPLLVEKAVSGLLRVVNRLLP--YKEFLSDELL-DSLRILLKLDPKILDAFLDKIAIFVSKLVKANAA 1077 (1386)
T ss_pred             HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhh--hhhhhhHHHh-hhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999877765668999999999999999998  8999999998 9999999999999999999999999999999999


Q ss_pred             CcccccChHHHHHHHhccCCCCchhHHHHHHHHHHhhCCCccChhhHHHHHHHHHHhHhccCCCccchhhHhHhhhhhHH
Q 000634         1071 NLQSAVGWKSVLHLLSVTGRHPDTHEQAVETLIMLISDGTHISKATYAYCIDCAFSFVALKNSPLEKNLKILDLLSDSVN 1150 (1380)
Q Consensus      1071 ~l~s~~gW~~vf~iL~~~~~~~~~~~~afe~L~~Ivsd~~~lt~~nf~~cV~~l~~F~~~~~~~~n~sl~ai~ll~~~~~ 1150 (1380)
                      ++++..||.++|++|..+++||++....|..+...+.|..|++|+||..||+|++.|++++.....+++.++|.+.....
T Consensus      1078 ~v~~~~~w~~~~slL~~~~~h~~a~~~~~~~~l~~m~e~~hl~~~~fe~~v~~~~~fve~~~~~~~~~l~~lde~s~sg~ 1157 (1386)
T KOG0928|consen 1078 NVHSKDGWALLFSLLELTARHPEADFLKFYRLLSKMSEASHLTPDNFELYVDCGSTFVEARVGQIMRSLSLLDEMSSSGE 1157 (1386)
T ss_pred             HhhccccHHHHHHHHHHHhcCCchhHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccc
Confidence            99999999999999999999999999999988888889999999999999999999999987777889999999998888


Q ss_pred             HHHHHhhhcccccCCccccccCCCCCchhhhhccCchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHhhhhccc
Q 000634         1151 LLIQWYKNAWSESGNNYSIASSTSTSSLEDYKGLNSLNFAVNLFIKLGEALRKTSLARREEIRNHAVLALQKCFTLAEDL 1230 (1380)
Q Consensus      1151 ~~~~~~~~~~~~~g~~~s~~s~~~~s~~~~~~~~~~~~~~~~lW~~Ll~~La~lc~d~R~eVR~~Ai~tLqr~ll~~~g~ 1230 (1380)
                      ...+|.+......++-.+             .+ ........+|++|++.++++|+|.|++|||+|++.|||+ ..+.++
T Consensus      1158 ~~~kw~~~~~~~~~~~~~-------------~~-~~~~~~~~~wl~l~~~~~kl~L~~r~~vRn~aL~~lqr~-~~~~~q 1222 (1386)
T KOG0928|consen 1158 VLDKWEIEAKNATESGDE-------------SK-KSNNYRSEIWLILLQIIRKLCLLSRRGVRNAALTKLQRI-IGALDQ 1222 (1386)
T ss_pred             chhHHHHHHhhhhccccc-------------cc-ccchhhHHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHH-HHhhhc
Confidence            888998763333221110             11 112234559999999999999999999999999999997 557899


Q ss_pred             CCChhhHHHHHHHHHHHhHHHHHHHHHHhhhccchhhhhh--chHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 000634         1231 DFSSINCINCFNLVIFAMVDDLHEKMIEYSRRENAEREMR--SMEGTLKNAMELLANVFLQFIKQIAESPGFRTFWLGVL 1308 (1380)
Q Consensus      1231 ~l~~~~W~~~f~~VLFPLL~~L~~~~~~~S~~~~~~~d~~--~~~ET~v~al~llskvFl~~l~~L~~~~~F~~lW~~iL 1308 (1380)
                      .+.+..|..||+.|+||+++++++.....        +++  .|++|++++.++++|+|++|+..+++.+.|..+|.++|
T Consensus      1223 ~l~~~~~~~Cf~~vlfpll~~l~~~l~~~--------~~~~~~me~t~~~~~~Ll~k~~L~~lq~ls~~~~f~~Lwl~~l 1294 (1386)
T KOG0928|consen 1223 GLAHSYWNPCFDLVLFPLLTDLLELLSDA--------SEKGNEMEVTLLLATKLLSKVFLQELQDLSSLSMFSTLWLGVL 1294 (1386)
T ss_pred             ccchHHHHHHHHHHhHHHHHHHHHHhccc--------ccccchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999875433        334  49999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcchhhhHHHHHHHHHHHhhhhcccCCCC---cchHHHHHHHHHHHHhcccCccccCCC
Q 000634         1309 RRMDTCMKADLGPYGETKLQETIPDLLRNMITMMKEREILAPK---EDEDLWEITYIQIQWIAPSLKEELFPD 1378 (1380)
Q Consensus      1309 d~~~~~m~~~~~~~~s~~L~Eav~esLKnmLLvm~~~g~l~~~---~~~~lW~~Tw~ri~~~lP~l~~el~p~ 1378 (1380)
                      ++|++||+.+.++++++.+.|++||.||||++||++.|++.+.   +.+.+|+.||.++++|+|+|+.||||.
T Consensus      1295 d~m~~l~~~~~~e~~~~~l~e~~pe~l~~~~~~m~~~ei~~~~~~~~~~~~w~~tw~~~~~~~p~l~~El~~~ 1367 (1386)
T KOG0928|consen 1295 DRMEKLMRGKTSEETSDKLNEIVPELLKNMLLVMKLQEIILDKDEIGKDSLWEITWERLNKIAPSLRDELFPD 1367 (1386)
T ss_pred             HHHHHHhhcccccchhhhHHhhhhhhhhhhhhhhhccccccCcccccccchHHHHHHHHHhcCchhhhhhCCC
Confidence            9999999999888889999999999999999999999999775   367899999999999999999999998

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5307 SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>KOG1848 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00171 Sec7 Sec7 domain; Domain named after the S Back     alignment and domain information
>PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] Back     alignment and domain information
>smart00222 Sec7 Sec7 domain Back     alignment and domain information
>KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal Back     alignment and domain information
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins Back     alignment and domain information
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1380
3ltl_A211 Crystal Structure Of Human Big1 Sec7 Domain Length 3e-39
1bc9_A200 Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average 1e-37
1r8m_E203 Sec7 Domain Of The Arf Exchange Factor Arno With Br 7e-37
4a4p_A192 Crystal Structure Of The Sec7 Domain From Human Cyt 8e-37
1r8q_E203 Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A 1e-36
2r0d_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 3e-36
1r8s_E203 Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C 4e-36
2r09_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 5e-35
1pbv_A195 Sec7 Domain Of The Exchange Factor Arno Length = 19 3e-34
3l8n_A202 Crystal Structure Of A Domain Of Brefeldin A-Inhibi 3e-33
1xsz_A356 The Structure Of Ralf Length = 356 6e-29
1re0_B221 Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe 1e-27
1xt0_B203 The Structure Of N-Terminal Sec7 Domain Of Ralf Len 7e-27
1ku1_A230 Crystal Structure Of The Sec7 Domain Of Yeast Gea2 5e-26
>pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 Back     alignment and structure 
Iteration: 1

 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 508 FNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADEFHIQVLKEF 567
           FN+  K+G++YL+   ++   P+   +A F    + LD   +G++LGD D+F+ +V+  +
Sbjct: 29  FNKKPKRGIQYLQEQGMLGTTPED--IAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAY 86
Query: 568 TETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFD-QQTSEIFVAKDSVYI 626
            +  +F+G    +ALR +LE FRLPGE+QKI R++E F+ R+ +  Q   +F + D+ Y+
Sbjct: 87  VDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYV 146
Query: 627 FCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISV 684
             YS+IML TD H+PQVK KMT+E++I+ NRGIN  KDLP EYLS +++ IA   IS+
Sbjct: 147 LAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISM 204
>pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 Back     alignment and structure
>pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 Back     alignment and structure
>pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 Back     alignment and structure
>pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 Back     alignment and structure
>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 Back     alignment and structure
>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 Back     alignment and structure
>pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 Back     alignment and structure
>pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 Back     alignment and structure
>pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 Back     alignment and structure
>pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 Back     alignment and structure
>pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1380
3ltl_A211 Brefeldin A-inhibited guanine nucleotide-exchange 1e-79
1r8s_E203 ARNO; protein transport/exchange factor, protein t 2e-79
1ku1_A230 ARF guanine-nucleotide exchange factor 2; SEC7 dom 1e-77
1xsz_A356 Guanine nucleotide exchange protein; ARF guanine n 1e-77
2r09_A347 Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph 2e-75
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 Back     alignment and structure
 Score =  260 bits (665), Expect = 1e-79
 Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 4/201 (1%)

Query: 483 DSDTWVEYVRLRKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQ 542
                 ++  + K QK       + FN+  K+G++YL+   ++     P+ +A F    +
Sbjct: 5   HHHHGTQF-EVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGT--TPEDIAQFLHQEE 61

Query: 543 GLDKNMIGDYLGDADEFHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRIL 602
            LD   +G++LGD D+F+ +V+  + +  +F+G    +ALR +LE FRLPGE+QKI R++
Sbjct: 62  RLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLM 121

Query: 603 EAFSDRFFDQ-QTSEIFVAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGING 661
           E F+ R+ +  Q   +F + D+ Y+  YS+IML TD H+PQVK KMT+E++I+ NRGIN 
Sbjct: 122 EKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGIND 181

Query: 662 GKDLPREYLSELFHSIASNAI 682
            KDLP EYLS +++ IA   I
Sbjct: 182 SKDLPEEYLSAIYNEIAGKKI 202
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 Back     alignment and structure
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 Back     alignment and structure
>1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 Back     alignment and structure
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1380
d1r8se_187 a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s 3e-66
d1ku1a_211 a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 4e-66
d1xsza1197 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio 3e-63
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: Exchange factor ARNO
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  219 bits (559), Expect = 3e-66
 Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 3/184 (1%)

Query: 499 RKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFRFTQGLDKNMIGDYLGDADE 558
           RK  +    FN D KKG+++L   +L+ +   P+ +A F    +GL+K  IGDYLG+ +E
Sbjct: 2   RKMAMGRKKFNMDPKKGIQFLVENELLQN--TPEEIARFLYKGEGLNKTAIGDYLGEREE 59

Query: 559 FHIQVLKEFTETFEFAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTSEIF 618
            ++ VL  F +  EF  + L  ALR +L +FRLPG++QKI R++EAF+ R+       +F
Sbjct: 60  LNLAVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYC-LCNPGVF 118

Query: 619 VAKDSVYIFCYSLIMLNTDQHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIA 678
            + D+ Y+  YS+IMLNTD HNP V+ KM  E F+  NRGIN G DLP E L  L+ SI 
Sbjct: 119 QSTDTCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIR 178

Query: 679 SNAI 682
           +   
Sbjct: 179 NEPF 182
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 Back     information, alignment and structure
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1380
d1ku1a_211 ARF guanine-exchange factor 2, Gea2 {Baker's yeast 100.0
d1r8se_187 Exchange factor ARNO {Human (Homo sapiens) [TaxId: 100.0
d1xsza1197 RalF, N-terminal domain {Legionella pneumophila [T 100.0
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 84.49
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: ARF guanine-exchange factor 2, Gea2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=426.77  Aligned_cols=188  Identities=37%  Similarity=0.607  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
Q ss_conf             9986558999996405293767999997899999999799989977-405999578862105872563899999982068
Q 000634          494 RKAQKRKSLIAGNHFNRDEKKGLEYLKLCQLVSDPPDPKALAFFFR-FTQGLDKNMIGDYLGDADEFHIQVLKEFTETFE  572 (1380)
Q Consensus       494 ~k~~K~~l~~g~~~FN~~pk~gi~~l~~~~~i~~~~~p~~iA~fl~-~~~~l~k~~ige~L~~~~~~~~~vL~~f~~~fd  572 (1380)
                      ++++|+.+.+|+.+||.+|++||+||+++|+++++ +|++||+||+ .+++|||++||||||+++  |.+||++|++.||
T Consensus         8 ~~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~-~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fd   84 (211)
T d1ku1a_           8 HMDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASD-SDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFD   84 (211)
T ss_dssp             CHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCS-SHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC-CHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCC
T ss_conf             89999999999999804999999999988884999-98999999986578889899999977984--6899999985247


Q ss_pred             CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC---------------CCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             8998868999998612557995368999999999999641699---------------9767877489999999984124
Q 000634          573 FAGMTLDNALRTYLETFRLPGESQKIQRILEAFSDRFFDQQTS---------------EIFVAKDSVYIFCYSLIMLNTD  637 (1380)
Q Consensus       573 f~~~~~~~aLR~~l~~frlpgE~q~Idri~e~Fa~~y~~~~~~---------------~~~~~~d~~~~l~ysiimLntd  637 (1380)
                      |+|+++|+|||.||..||||||+|+|||+||+||++||+ +||               .+|.++|++|+|+||+||||||
T Consensus        85 f~~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~-~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTd  163 (211)
T d1ku1a_          85 FSGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCE-NQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTD  163 (211)
T ss_dssp             CTTCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHH-TSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             689978999999998450886089999999998499996-2888841000000001111225710899999999997002


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             789201488898889984126789999999899999999550764445
Q 000634          638 QHNPQVKKKMTEEEFIRNNRGINGGKDLPREYLSELFHSIASNAISVF  685 (1380)
Q Consensus       638 lhn~~~k~~mt~~~F~~n~~g~n~g~d~p~~~L~~iy~~I~~~~i~~~  685 (1380)
                      +|||++|+|||+++|++|+||+|+|+|||+++|++||++|+.+||+||
T Consensus       164 lHnp~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP  211 (211)
T d1ku1a_         164 LHNPQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP  211 (211)
T ss_dssp             HTCTTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             038755678899999999866767788999999999999985877799
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure