Citrus Sinensis ID: 000648

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370---

MDSTDENSIVKWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSRPSKEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDVINTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKFNSFMDLWQTSLK

cccccHHHHHHHHHcccHHHHccccccccccccccccccccccccccEEEEEEccEEEEEEcccccccEEEEEEEHHHHHHccccccEEccccccccccHHHHcccccccEEEEEEEccccccccccccccccccEEcccccccccccccccccccccccccccccEEccccEEEEEcccccccccEEEEEEEEccccccccccccccccccEEEEEEEEcccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccEEEEcccccccccccccccccHHHHHHHHHcccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccEEEEEEEEEcccEEEcccEEEEEcccccccccccEEEEEEEEEEEcccccccccEEEEEEccccccccccEEEEccccccccccccEEEccccccccccccccHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccccEEEEccccccccccccccccEEEEEcccEEEEEEEEEccccccccccccccEEEccccccccEEEEEEEEcccccccccccccEEEEEEEcccccccccEEEEEEccccccccccccccccccEEEEEccccccEEEEEEcccccccccccccccEEEEccccEEEEEEcccEEEcccccEEEEEEEEEEcccccccccccEEEEEEEccccccEEEEEEEEccccccEEEEcccccccccccccccEEEEEEEEcccccccccEEEEEEEccEEEEcccccEEEEcccccccccccEEEEEEcccEEEEEEEccccEEEEEEcccccEEEEcccccccEEcccccEEEEEEEEEcccccEEEEEcccccccccEEEEEcccccccccccEEEEEccEEEccccccccccccEEEEEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccccccccHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEcccccccccHHHHccccEEEEEcHHHHHHHHccccccEEEEcccEEccccEEEEccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

ccccccccHEEcccccccHHHHHHccccccccccccccccccccccHHHHHHcccEEEEEcccccccEEEEEEEcHHHHHccccccccEEcccccccccHHHHHcccccccEEEEEEcccccHHcHHHHHHHHHHccccEEEccccccccccEcEEEEEEcccccEEEcccEEEEEEcccccccEEEEEEEEEEEccccccccccccHHHHHcEEEEEEEcccccccHHHHHHHHHHHHccccEEccccccccEEHHHHccccccccccccccccHHHccccHHHHHHHHccEEEEEEEccccccccccHcHHHcccHHHHHHHHcccccccccccEEEEEEEcccEccHHHHHHHHHHHHHHHHHHHcHHHcccccccEEEEccccHHHccccccEEEEHHHEEcccccccccccEEEEcccccccccccEEEEEEEEEEEccccccccEEEEEEEccccccccccEEEEEccccEEEEccEEEEcEEEEccccEEEcccHHHHHHHHHHHcccccEEEcccccHHHHcccccccccccccccccccEEEEEEEcccccccccccccccEEEEEcccEEEEEEEEccccccccccEEEEEEEEccccccccEEEEEEccccccHHHHHHccEEEEEEEEcccccccccEEEEEEccccccEEEEccccccccEEEEEcccccccEEEEEEccccccccccccEEEEEEcccEEEEEEccEEEEEcccccEEEEEEEEEEcccHHHccccccEEEEEEccccccEEEEEEEEcccccHHEEEcccHHHHccccccHHHEEEEEEcccccccccccEEEEEEEEEEEEcccccEEEEccccEEEccHHHHHHcccccEEEEEEEccccEEEEEEEHHHHHHHHHHHccccccccccccEEEEEEEEEccccccccEccccccccEEEEEEEccccccHccEEEEEEccEEEEccccccccccEEEEEEEEcccccEEEEEEEEEEcccccccccccccccccccEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccEccccHHHHHHHHccccccccEEEEEEccccccccccccccHHHHccccccccccccccccccEEEEEEEEccHcHcEEEccccccHHHHHHHHHHHHcEEEccHHHHHHHcHHcccccEEEcccEEccccEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc

mdstdensivkwgkMGASLHRASkaqgiggkppyltpffgmfgyggpiasmhLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAEltwrtnggirfpskdeiadsphgsftkveiwepklksldvkplgcklkdiyfpyiqcdeisstgkttrpiefqvngidlaevaggEVAItnmhscngpDFILQLHFSLrqasattnspgsrpskeanARLKFvyfpvteegesIDIIMNKLISEgcvaaanydtrsrvSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCfidtdagfnptpsktdlahQNLYTIALKNfgaktfkeekDVTVEIRrdgklltpIQLEKDYQEWLLNMHDhydaekdcgvdqpillvghknikplvisTDVARVHKVVKKkgamwksgqKVKLLKGAYagihnndvYATIEYFVIEglqgdaggeariicrplavpdekgcvlAVNNgnaslhigsslslpigvidsekcvpvnknvWDQQLEKYRQKSPSTIELLKETQCqeleidgvlpssaiagqnppreivavvrpasfisssasKNLVQKYIVKNSSEMLMEVKFKcedenledvvplytarvapssrkgyqgLYIFEVGckfpklfqnagaytfsfhLTETSCKSCEKKVLVKgssevgkwklldtkerpelrvrvgsflpplsvacydiydnripfeskpqflvkikpskiikvedklkwnlspdkltlNIQDILVASSkldeirpdyrATLVisskdkpvsvsipcrvtpgslknvavhpqnlgillpGSVIKMLKLEMFDAFYNNVKKGLEVELnvdgfciedqlglrrkvdgygcidlsgllkvkagygknvslsvlsdngvifkqdfQTEKRELRVisgvpecctvgsqledITFEivdskgavdvtihdddksgqshtltiksdvintENSIRYAFRqgrctvpaislpqnegcfcfVATHSQYTELNISIkvpivrapklesddirtpcsdgkvfllegpspikhvgnhmVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVsvepyslltKEEIIRRIKSIYQSAASVICcstkeflcskprsnfmedvvgPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKyeqdgtidrKCALHATAAALGKSIDGRYLVICLegirpysgkfgsndpqrklalpaptlpkgnipagfVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIrhgavsldggilkedgiislgcgnpticfpivrtRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKFNSFMDLWQTSLK

mdstdensivkWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWrtnggirfpskdeiadsphgsftkveiwepklksldvkPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASAttnspgsrpskeanaRLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKnfgaktfkeekdvtveirrdgklltpiqLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKnikplvistdvaRVHKVVkkkgamwksgqkvKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPSTIELLKETQCQELEIDGVLpssaiagqnPPREIVAVVRPasfisssasknlvQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTarvapssrkgYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLvkgssevgkwklldtkerpelrvrvgsflpplsVACYDIYDNripfeskpqflvkikpskiikvedklkwnlspdkltlnIQDILVasskldeirpDYRATlvisskdkpvsvsIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSlsvlsdngviFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIhdddksgqshtltiksdvinteNSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLegpspikhvgnHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSklqvsvepyslltKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAalgksidgRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKlknsedkfnsfmdlwqtslk

**************************GIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPS********HGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSL********************RLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKY*******IELLKETQCQELEIDGVLP***********EIVAVVRPASFISSSASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHD*******HTLTIKSDVINTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKF**************TLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLI*********************************

***********WGKM*******************LTPFFGMFGYGGPIASMHLGRRALVS***KVSKEVYTLHLEK**********************************FTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQ****************QVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATT********KEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQR****AHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFG******EKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKY*QKSPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRP****************IVKNSSEMLMEVKF**************TARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSL**********KQDFQTEKREL****G****CTVGSQLEDITFEIVDSKGAVDVTIHDDD*S**S****IKSDVINTENSIRYAFRQ**********PQNEGCFCFVATHSQYTELNISIKVPIVRAPK*********************************************************************************************************I******************DVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSG**************APTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICF**********************************************************LWQT***

********IVKWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQ**************EANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDVINTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKFNSFMDLWQTSLK

******NSIVKWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQAS*******SRPSKEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDVINTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKFNSFMDLWQTS**

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MDSTDENSIVKWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSRPSKEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDVINTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCxxxxxxxxxxxxxxxxxxxxxxxxxxxxVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIxxxxxxxxxxxxxxxxxxxxxxxxFNSFMDLWQTSLK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1373
302143908		1718	unnamed protein product [Vitis vinifera]	0.957	0.765	0.529	0.0
297812599		1607	predicted protein [Arabidopsis lyrata su	0.969	0.828	0.467	0.0
334187894		1598	gamma-irradiation and mitomycin c induce	0.965	0.829	0.453	0.0
10177088		1634	unnamed protein product [Arabidopsis tha	0.965	0.811	0.444	0.0
359490805		1887	PREDICTED: uncharacterized protein LOC10	0.459	0.334	0.617	0.0
147767611		1459	hypothetical protein VITISV_043621 [Viti	0.464	0.437	0.550	0.0
147779006		1117	hypothetical protein VITISV_039356 [Viti	0.475	0.584	0.498	0.0
357436479		1675	hypothetical protein MTR_1g008050 [Medic	0.373	0.306	0.573	1e-180
357436467		1009	hypothetical protein MTR_1g007990 [Medic	0.505	0.687	0.449	1e-160
357141225		1303	PREDICTED: uncharacterized protein LOC10	0.689	0.726	0.322	1e-127

>gi\|302143908\|emb\|CBI23013.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1415 bits (3662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1389 (52%), Positives = 948/1389 (68%), Gaps = 74/1389 (5%)

Query: 35   LTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGG 94
              PFFGMFGYGGPIASMHLGR ALVSSKTK SK+VYTLHLE+EAL+  S ++LTWRT+GG
Sbjct: 335  FKPFFGMFGYGGPIASMHLGRCALVSSKTKESKKVYTLHLEREALLSSSGSDLTWRTSGG 394

Query: 95   IRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQ--------CDEI 146
            IR PS++E   SPHGSFTKVEI++PK++ L+V  L  KLKDIYFPYIQ        CDE+
Sbjct: 395  IRNPSEEETEKSPHGSFTKVEIFKPKIERLNVFQLQRKLKDIYFPYIQVAIGGVVQCDEV 454

Query: 147  SSTGKTTRPIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGS 206
              TGKT  P+EFQVNG+DLAE+ GGEV  TN+HS NGP+F+LQL F   Q +  T SPG 
Sbjct: 455  CDTGKTNTPVEFQVNGLDLAEIDGGEVGTTNLHSSNGPEFVLQLRFYGNQDNVATKSPGL 514

Query: 207  RPSKEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDV 266
            R S+EANARLK VYFP+ E  E+++ I+ KL +EGC    NYDT SRVSIRRLGRLLPD 
Sbjct: 515  RSSQEANARLKCVYFPIVEGKENLETILEKLEAEGCGTNENYDTFSRVSIRRLGRLLPDA 574

Query: 267  HWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNF 326
             W+ LP M+ + +KG+K  LLK+ C RVKCFIDTDAGFNPTPSKTDLAH N +T ALK+F
Sbjct: 575  RWSLLPFMEHKLKKGDKGQLLKRCCRRVKCFIDTDAGFNPTPSKTDLAHHNPFTKALKDF 634

Query: 327  GAKTFKEEK-DVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGH 385
            G K  ++ + ++ VEI RDGK LT +QLEK+Y +W+  MHD YD E D G DQP+++VG 
Sbjct: 635  GNKPPEKGRGNINVEILRDGKSLTLLQLEKEYLDWISQMHDLYDEEIDSGEDQPVIVVGS 694

Query: 386  KNIKPLVISTDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQ 445
             N K L IS+DV RVH+++++KG  WK GQK+K+LKGA  G H ++V+AT+EY ++EG Q
Sbjct: 695  LNKKQLGISSDVVRVHEIIRRKGKSWKRGQKIKVLKGACPGCHKSNVFATLEYILLEGFQ 754

Query: 446  GDAGGEARIICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWD 505
            GDAGGEAR+ICRPL++PDE GC+LAV++G AS     SLSLPI VIDS KC+ V  + W 
Sbjct: 755  GDAGGEARLICRPLSLPDEDGCILAVDDGAASFDCRGSLSLPISVIDSGKCLAVESSEWL 814

Query: 506  QQLEKYRQKSPSTIELLKETQCQELEIDGVLPSSAI--AGQNPPREIVAVVRPASFISSS 563
             QLEK RQK+PSTI++L E  C ELE+DG LP  A   AGQ PP+EIVAVVRPASF+S  
Sbjct: 815  FQLEKQRQKAPSTIDILSERHCLELEVDGALPVDAPVHAGQVPPKEIVAVVRPASFLS-- 872

Query: 564  ASKNLVQKYIVKNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCK 623
                              MEVK     +  +D   +Y+  V PSSR G+ GLYIF +GCK
Sbjct: 873  ------------------MEVKLM---DGTKDTKHIYSKCVTPSSRNGFHGLYIFPLGCK 911

Query: 624  FPKLFQNAGAYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLP 683
            FP+LFQ AG YTF+  L  +S KSCEK+VLVK   +V  W+     +     VR GS LP
Sbjct: 912  FPQLFQKAGVYTFTVFLKGSSFKSCEKRVLVKALPKVSSWRFSSDIQNTVYSVRAGSCLP 971

Query: 684  PLSVACYDIYDNRIPFESKPQFLVKIKPSKIIKVE-DKLKWNLSPDKLTLNIQDILVASS 742
            P S+ACYD Y+N+IPF S P+F++K   +  +  + DK+K  LS D LTL ++D+L+ SS
Sbjct: 972  PFSIACYDSYENQIPFTSIPEFIIKSNWNGGVLADFDKMKLELSSDNLTLKVKDVLIESS 1031

Query: 743  KLDEIRPDYRATLVISSKDKPVSVSIPCRVTPGSL-KNVAVHPQNLGILLPGSVIKMLKL 801
             LD+IRP Y  TLV+  +D+  S+S+ C V PG L + +A  P +   LLPG VI+ L L
Sbjct: 1032 DLDKIRPSYATTLVLCPRDELPSISVACEVNPGPLERAIAQPPVSDNQLLPGCVIEELVL 1091

Query: 802  E-----------------------------MFDAFYNNVKKGLEVELNVDGFCIEDQLGL 832
            E                             MFDA+ N+ ++GLEV+ NVDGFC +D  GL
Sbjct: 1092 EVSSHIVIILPHDDQFIHTIVLCMLFLPLFMFDAYGNHAREGLEVQFNVDGFCFQDHNGL 1151

Query: 833  RRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTEKRELRVISGVPECCT 892
            +RKVD  GCIDLSGLL+V  GYGKNVSLSVLS N V+FKQ+ QTEKRELR  S VP+ C 
Sbjct: 1152 KRKVDDRGCIDLSGLLRVTTGYGKNVSLSVLSGNKVVFKQELQTEKRELRAASIVPQSCA 1211

Query: 893  VGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDVINTENSIRYAFRQGRCTVP 952
             GSQLE+I FEI++SKG VD T+H+++K GQ HTLTI SD    + S+R+AFR GRC +P
Sbjct: 1212 AGSQLENIVFEIINSKGEVDETVHEEEKHGQFHTLTIMSDSFYLDGSVRFAFRNGRCIIP 1271

Query: 953  AISLPQNEGCFCFVATHSQYTELNISIKVPIVRAPKLESDDIRTPCSDGKVFLLEGPSPI 1012
             I LP+ +G F F+A HS + EL++++KV +V   K++ +D++    +  + LL+     
Sbjct: 1272 TIPLPRKQGDFTFLAAHSCHPELSLAVKVSVVEVLKVKQEDVQLQYPNENMLLLQDSPAP 1331

Query: 1013 KHVGNHMV-PIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEVEEVLSKLQVSVEPY 1071
            +HV N +V  +M    E+E ++   GL IG +E+ L+LL+ QK ++E+ + KLQ SVE  
Sbjct: 1332 RHVENSLVESLMNDEKEIEDDICKIGLFIGDNERKLELLHKQKGDIEQSIEKLQASVEYD 1391

Query: 1072 S-------LLTKEEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTV 1124
            S       L  KE ++R I+   +SAA+  C  ++E     P S  M+D+VG VAL+ TV
Sbjct: 1392 SFNNHRGYLSKKESVMRCIEKKDKSAAAFFCNLSREIPFQDPVSQLMKDIVGVVALLATV 1451

Query: 1125 CTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDG 1184
              N+L R LAEYLGE QMLA+VCRS+EAA  LEKYE DG +DR+ AL+A A   GK I+ 
Sbjct: 1452 RINRLGRMLAEYLGEDQMLAVVCRSYEAASKLEKYEWDGKVDREHALYAVAKTFGKPIND 1511

Query: 1185 RYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIR 1244
            R+LVICLE IRPY G F  NDPQRKL +P P LP G +P GF+GYAVNMV+L+ HH+  R
Sbjct: 1512 RFLVICLENIRPYIGGFQDNDPQRKLNIPNPILPTGEMPPGFLGYAVNMVDLESHHLLTR 1571

Query: 1245 TSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCGNP 1304
            T+AG+GLRETL Y LFG+LQVY+TR+DM +A    RHGAVSLDGGI+K +G+IS GC  P
Sbjct: 1572 TTAGHGLRETLFYCLFGELQVYQTREDMKKACFYARHGAVSLDGGIMKGNGVISFGCREP 1631

Query: 1305 TICFPIVRTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKFNSF 1364
             I FP+     S +++  L+ IEEK+  L  +   I +  K + K  +KL+    +    
Sbjct: 1632 QIWFPVANLE-SPKNVRILEVIEEKRTSLRLVHNEIGKLTKIINKAQKKLQKKISRCRKL 1690

Query: 1365 MDLWQTSLK 1373
            MD  +  +K
Sbjct: 1691 MDRLEPCMK 1699

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297812599\|ref\|XP_002874183.1\| predicted protein [Arabidopsis lyrata subsp. lyrata] gi\|297320020\|gb\|EFH50442.1\| predicted protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|334187894\|ref\|NP_197816.3\| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana] gi\|332005896\|gb\|AED93279.1\| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|10177088\|dbj\|BAB10394.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|359490805\|ref\|XP_002272676.2\| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147767611\|emb\|CAN64522.1\| hypothetical protein VITISV_043621 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147779006\|emb\|CAN73471.1\| hypothetical protein VITISV_039356 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357436479\|ref\|XP_003588515.1\| hypothetical protein MTR_1g008050 [Medicago truncatula] gi\|355477563\|gb\|AES58766.1\| hypothetical protein MTR_1g008050 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357436467\|ref\|XP_003588509.1\| hypothetical protein MTR_1g007990 [Medicago truncatula] gi\|355477557\|gb\|AES58760.1\| hypothetical protein MTR_1g007990 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357141225\|ref\|XP_003572140.1\| PREDICTED: uncharacterized protein LOC100829204 [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1373
TAIR\|locus:2082876		420	DMS3 "AT3G49250" [Arabidopsis	0.240	0.785	0.394	7.8e-50
DICTYBASE\|DDB_G0277185		2284	DDB_G0277185 [Dictyostelium di	0.062	0.037	0.291	5.7e-06

TAIR\|locus:2082876 DMS3 "AT3G49250" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 531 (192.0 bits), Expect = 7.8e-50, P = 7.8e-50
 Identities = 138/350 (39%), Positives = 191/350 (54%)

Query:  1029 LESEVRNYGLCIGRHEKALKLLNDQKMEVEEVL-------SKLQVSVEPYS-----LLTK 1076
             LES++   G  I +HE  LK L  QK +++E +       SKL  S  P S      L  
Sbjct:    56 LESDLEAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLNSSPTPRSENSDNSLQG 115

Query:  1077 EEIIRRIKSIYQSAASVICCSTKEFLCSKPRSNFM--EDVVGPVALIGTVCTNKLSRTLA 1134
             E+I  +I     SAA V+  S  E L     S  M  + VVG VA +G V    LS+ L+
Sbjct:   116 EDINAQILRHENSAAGVL--SLVETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILS 173

Query:  1135 EYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGI 1194
              YLG   MLA+VCR++E+  ALE Y+  G ID    LH   +++G+ I   +  ICLE +
Sbjct:   174 NYLGTRSMLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENL 233

Query:  1195 RPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRET 1254
             RPY G+  ++D QR+L L  P LP G  P GF+G+AVNM+ +D  ++   TS G GLRET
Sbjct:   234 RPYVGQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRET 293

Query:  1255 LLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGIISLGCG---NPTICFPIV 1311
             L Y LF +LQVYKTR DMI A  CI  GAVSLDGGI+++ GI +LG     N     P  
Sbjct:   294 LFYNLFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTA 353

Query:  1312 RTRISTQSIEALKQIEEKKLELDGIMQLIQESNKALEKDLEKLKNSEDKF 1361
                +   S EA K+++E K + +  ++ I+      E  +      +++F
Sbjct:   354 SRTMDNYS-EAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEF 402

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006306 "DNA methylation" evidence=RCA;IMP

GO:0031047 "gene silencing by RNA" evidence=RCA;IMP

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA

GO:0006261 "DNA-dependent DNA replication" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007267 "cell-cell signaling" evidence=RCA

GO:0009555 "pollen development" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0016444 "somatic cell DNA recombination" evidence=RCA

GO:0016568 "chromatin modification" evidence=RCA

GO:0016569 "covalent chromatin modification" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

GO:0051726 "regulation of cell cycle" evidence=RCA

DICTYBASE\|DDB_G0277185 DDB_G0277185 [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00037253001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (1533 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1373
pfam13589		134	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr	6e-05

>gnl\|CDD\|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Back alignment and domain information

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 5   DENSIVKWGKMGASLHRASKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTK 64
               +    K+G S     +               G  G G  +AS+ LGR+  V+SK +
Sbjct: 45  SYEELRNALKLGRSSKEGERDS----------TTLGRKGIGMKLASLSLGRKLTVTSKKE 94

Query: 65  VSKEVYTLHLEKEALMRCSDAELTWRTNGGIRFPSKDEIADSPHG 109
              E  TL L+ + + +  + +L   T+       ++ +  + HG
Sbjct: 95  --GESSTLTLDLDDIDKEGEWDLPELTS----AEIEESLDKNSHG 133

This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90. Length = 134

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1373
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	99.92
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	99.9
KOG0996		1293	consensus Structural maintenance of chromosome pro	99.81
KOG0964		1200	consensus Structural maintenance of chromosome pro	99.78
KOG0933		1174	consensus Structural maintenance of chromosome pro	99.73
KOG0018		1141	consensus Structural maintenance of chromosome pro	99.66
PF06470		120	SMC_hinge: SMC proteins Flexible Hinge Domain; Int	99.55
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	99.32
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	97.9
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	97.56
PF13589		137	HATPase_c_3: Histidine kinase-, DNA gyrase B-, and	97.25
PRK04863		1486	mukB cell division protein MukB; Provisional	93.7
PRK05218		613	heat shock protein 90; Provisional	86.58
KOG0979		1072	consensus Structural maintenance of chromosome pro	84.02

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

Probab=99.92  E-value=2e-24  Score=272.30  Aligned_cols=206  Identities=20%  Similarity=0.260  Sum_probs=152.7

Q ss_pred             HHHHHHHHHhhhhhhccccccc----ccccCCCCCCCCCCeeeecccceeeccchhhhHHHhhhhhchhceEEeccHHHH
Q 000648         1078 EIIRRIKSIYQSAASVICCSTK----EFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAA 1153 (1373)
Q Consensus      1078 ei~keI~~~ensAA~i~c~l~~----r~~~~~~~S~~l~GIiGvVAeLi~V~~~ylsAlLseyLGietmL~IVvrs~e~A 1153 (1373)
                      +..+++.+++...+.+....++    ++......+ .++||+|+|++|++|+++|..| |+.+|| ..+-+|||+|+.+|
T Consensus       478 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~Gv~G~v~~li~v~~~y~~A-ie~alG-~~l~~vVV~~~~~a  554 (1163)
T COG1196         478 RLEKELSSLEARLDRLEAEQRASQGVRAVLEALES-GLPGVYGPVAELIKVKEKYETA-LEAALG-NRLQAVVVENEEVA  554 (1163)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhc-cCCCccchHHHhcCcChHHHHH-HHHHcc-cccCCeeeCChHHH
Confidence            4444555555555555554443    111011222 3899999999999999999988 455555 34569999999999


Q ss_pred             HHHHHhhhcCCccccchhhhhhhhcCcccCCceEEEecCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCeEEEEecc
Q 000648         1154 FALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNM 1233 (1373)
Q Consensus      1154 K~li~YLkeg~Id~~~~lh~~~~s~kr~~~GR~TFLPLd~IRP~~~~~~~~dPQrkL~L~~P~L~~g~~~~GFIGyAVNL 1233 (1373)
                      +.++.||                  ++++.||+|||||+.|+|....                .+.  ..+||+|+|+|+
T Consensus       555 ~~~i~~l------------------k~~~~gr~tflpl~~i~~~~~~----------------~~~--~~~g~~~~a~dl  598 (1163)
T COG1196         555 KKAIEFL------------------KENKAGRATFLPLDRIKPLRSL----------------KSD--AAPGFLGLASDL  598 (1163)
T ss_pred             HHHHHHH------------------hhcCCCccccCchhhhcccccc----------------ccc--cccchhHHHHHH
Confidence            9999999                  8888999999999999986541                011  189999999999


Q ss_pred             ccccccccccccccCCCchHhHHHHhhcCeEEEechhcHHHHHHhcc-C----cEEEecCceeccCceEEeccCCCcccc
Q 000648         1234 VNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIR-H----GAVSLDGGILKEDGIISLGCGNPTICF 1308 (1373)
Q Consensus      1234 I~lD~k~~~~~T~~g~GLRetLfy~LFGrt~VyeTredM~~A~~~ak-~----giVTLDGeIIn~gGsmTGGs~~~~~kf 1308 (1373)
                      |+||++|.            .+|+++||+|+|++   +|+.|+.++. +    ++|||||++++++|+||||++.     
T Consensus       599 i~~d~~~~------------~~~~~~l~~t~Iv~---~l~~A~~l~~~~~~~~riVTl~G~~~~~~G~~tGG~~~-----  658 (1163)
T COG1196         599 IDFDPKYE------------PAVRFVLGDTLVVD---DLEQARRLARKLRIKYRIVTLDGDLVEPSGSITGGSRN-----  658 (1163)
T ss_pred             hcCCHHHH------------HHHHHHhCCeEEec---CHHHHHHHHHhcCCCceEEecCCcEEeCCeeeecCCcc-----
Confidence            99999999            99999999999999   9999998877 3    3999999999999999999654     


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000648         1309 PIVRTRISTQSIEALKQIEEKKLELDGIMQLIQE 1342 (1373)
Q Consensus      1309 p~s~L~rk~Ei~eLe~qlee~k~k~~klee~ik~ 1342 (1373)
                      +.+.+.+++++.++..++..+...+......++.
T Consensus       659 ~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~  692 (1163)
T COG1196         659 KRSSLAQKRELKELEEELAELEAQLEKLEEELKS  692 (1163)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1221344445656666655555555544444443

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF06470 SMC_hinge: SMC proteins Flexible Hinge Domain; InterPro: IPR010935 This entry represents the hinge region of the SMC (Structural Maintenance of Chromosomes) family of proteins	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PRK05218 heat shock protein 90; Provisional	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1373
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 71.4 bits (174), Expect = 2e-12
 Identities = 98/673 (14%), Positives = 190/673 (28%), Gaps = 224/673 (33%)

Query: 97  FPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPI 156
           F  KD + D P    +K EI                   I    +  D +S    T R  
Sbjct: 33  FDCKD-VQDMPKSILSKEEI-----------------DHI---IMSKDAVS---GTLRLF 68

Query: 157 E-FQVNGIDLAEVAGGEVAITNMHSCNGPDFIL-QLHFSLRQASATTNSPGSRPSKEANA 214
                   ++ +    EV   N        F++  +    RQ S  T     +  +  N 
Sbjct: 69  WTLLSKQEEMVQKFVEEVLRINY------KFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 215 RLKFVYFPVTEEGESIDIIMNKLIS------------EGC---VAAANYDTRSRVSIRRL 259
              F  + V+   +    +   L+              G      A            ++
Sbjct: 123 NQVFAKYNVSRL-QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL-----DVCLSYKV 176

Query: 260 GRLLPD-VHWAWLPLMDLRQRKGEKAHL--LKKFCLRVKCFIDTDAGFNPTPSKTDLAHQ 316
              +   + W     ++L+     +  L  L+K   ++             P+ T  +  
Sbjct: 177 QCKMDFKIFW-----LNLKNCNSPETVLEMLQKLLYQI------------DPNWTSRSDH 219

Query: 317 NLYTIALKNFGAKTFKEEKDVTVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEK---- 372
               I L+          +    E+RR       +   K Y+  LL + +  +A+     
Sbjct: 220 -SSNIKLR------IHSIQA---ELRR-------LLKSKPYENCLLVLLNVQNAKAWNAF 262

Query: 373 --DCGVDQPILLVGHKNIKPLVISTD--VARVHKVVKKKGAMWKSGQKVKLLKGAYAGIH 428
              C              K L+ +    V                   + L        H
Sbjct: 263 NLSC--------------KILLTTRFKQVTDFLSAATTT--------HISL-------DH 293

Query: 429 NNDVYATIEYFVIEGLQGDAGGEARII-CRPLAVPDE--KGCVLAVNNGNASLHIGSSLS 485
           ++      E   ++ L        + + CRP  +P E        +     S+ I  S+ 
Sbjct: 294 HSMTLTPDE---VKSLL------LKYLDCRPQDLPREVLTTNPRRL-----SI-IAESIR 338

Query: 486 LPIGVIDSEKCVPVNKNVWDQ----QLEKYRQKSPSTIELLKETQCQELEID-GVLPSSA 540
                             WD       +K      S++ +L+  + +++     V P SA
Sbjct: 339 -------------DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 541 IAGQNPPREIVAVV-------RPASFISSSASKNLVQKYIVKNSSE---MLMEVKFKCED 590
               + P  +++++            ++     +LV+K   +++     + +E+K K E+
Sbjct: 386 ----HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441

Query: 591 E-NLED-VVPLYTAR-------VAPSSRKGYQGLYI---------FEVGCKFPKLFQNAG 632
           E  L   +V  Y          + P     Y   +I          E    F  +F +  
Sbjct: 442 EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD-- 499

Query: 633 AYTFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDT--------------KERPELRVR- 677
              F F          E+K+    ++      +L+T                + E  V  
Sbjct: 500 ---FRF---------LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA 547

Query: 678 VGSFLPPLSVACY 690
           +  FLP +     
Sbjct: 548 ILDFLPKIEENLI 560

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1373
d1gxja_		161	Smc hinge domain {Thermotoga maritima [TaxId: 2336	99.83

>d1gxja_ d.215.1.1 (A:) Smc hinge domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Smc hinge domain
superfamily: Smc hinge domain
family: Smc hinge domain
domain: Smc hinge domain
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=1.9e-20  Score=168.63  Aligned_cols=141  Identities=23%  Similarity=0.280  Sum_probs=122.3

Q ss_pred             CCCCEEEECCCCEEECCCHHHHHHHHHHHHCHHCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf             78870141122133146124347876420200124796367888999973311885100001354531176669905897
Q 000648         1110 FMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVI 1189 (1373)
Q Consensus      1110 ~l~GIiGvVAeLi~V~d~ylsAlLseyLGietmL~IVvks~e~AK~li~YLkeg~Id~~~~lh~~~~s~kk~~~GR~TFL 1189 (1373)
                      ..+||+|.|++|++|+++|+.| ++.+|| +.+.+|||+|.+.|+.+++|+                  +++..||+||+
T Consensus        15 ~~~gv~G~v~dli~v~~~y~~A-ve~aLG-~~l~~vVV~~~~~A~~~i~~l------------------k~~~~Gr~tfi   74 (161)
T d1gxja_          15 RFPGLVDVVSNLIEVDEKYSLA-VSVLLG-GTAQNIVVRNVDTAKAIVEFL------------------KQNEAGRVTIL   74 (161)
T ss_dssp             GCTTEEEEHHHHCBCCGGGHHH-HHHHHG-GGGGCEEESSHHHHHHHHHHH------------------HHHTCCCEEEE
T ss_pred             CCCCCEEEHHHHCCCCHHHHHH-HHHHHH-HHHCEEEECCHHHHHHHHHHH------------------HHCCCCEEEEE
T ss_conf             2799558788827608879999-999963-654059978799999999997------------------43258618999


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECH
Q ss_conf             51797889999999981001359999999999999707987123213622321111368872585999860274999113
Q 000648         1190 CLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTR 1269 (1373)
Q Consensus      1190 PLd~IRP~~~~~~~~dpQrkL~L~~P~L~~g~~p~GFIGyAVNLI~lD~k~~~~~T~~g~GLRetLfy~LLGrllVyeTr 1269 (1373)
                      ||+.+++....                .+.....+|++++|.|+|++|+++.            .++.+|||+++|++  
T Consensus        75 pl~~i~~~~~~----------------~~~~~~~~~~v~~~~dlV~~~~~~~------------~~~~~llg~~~iv~--  124 (161)
T d1gxja_          75 PLDLIDGSFNR----------------ISGLENERGFVGYAVDLVKFPSDLE------------VLGGFLFGNSVVVE--  124 (161)
T ss_dssp             ETTTCCCCCCC----------------CTTGGGSTTEEEEHHHHCBCCGGGH------------HHHHHHHTTCEEES--
T ss_pred             ECCCCCCCCCC----------------CCCCCCCCCCCHHHHHHCCCCHHHH------------HHHHHHCCCEEEEC--
T ss_conf             65543465321----------------1100037773332887433888899------------99999859989999--


Q ss_pred             HCHHHHHHHCC---CC--EEEECCCEECCCCEEEECC
Q ss_conf             23999997602---85--7980484320684288246
Q 000648         1270 KDMIEAHTCIR---HG--AVSLDGGILKEDGIISLGC 1301 (1373)
Q Consensus      1270 edM~~A~~lak---~g--iVTLDGeII~~gGsiTGGs 1301 (1373)
                       |++.|..+++   .+  +|||||++++++|.|+||.
T Consensus       125 -~l~~A~~l~~~~~~~~~~VT~dGd~~~~~G~i~GG~  160 (161)
T d1gxja_         125 -TLDDAIRMKKKYRLNTRIATLDGELISGRGAITGGR  160 (161)
T ss_dssp             -CHHHHHHHHHHHTCCSCEEETTSCEECTTSCEEEEE
T ss_pred             -CHHHHHHHHHHCCCCCEEEECCCCEECCCEEEECCC
T ss_conf             -999999999864999759969983898986683799

PyMOL of d1gxja_