Citrus Sinensis ID: 000655
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1370 | 2.2.26 [Sep-21-2011] | |||||||
| Q54F23 | 1647 | HEAT repeat-containing pr | yes | no | 0.866 | 0.720 | 0.240 | 3e-89 | |
| Q8NDA8 | 1641 | HEAT repeat-containing pr | yes | no | 0.486 | 0.406 | 0.233 | 2e-46 | |
| A7E2Y6 | 1652 | HEAT repeat-containing pr | yes | no | 0.334 | 0.277 | 0.257 | 9e-35 | |
| A6NES4 | 1706 | HEAT repeat-containing pr | no | no | 0.431 | 0.346 | 0.210 | 1e-19 | |
| Q7Z745 | 1585 | HEAT repeat-containing pr | no | no | 0.331 | 0.286 | 0.228 | 2e-19 | |
| D3Z750 | 1679 | HEAT repeat-containing pr | no | no | 0.341 | 0.278 | 0.215 | 1e-18 | |
| Q7M6Y6 | 1581 | HEAT repeat-containing pr | no | no | 0.259 | 0.225 | 0.231 | 7e-16 | |
| Q7TNB4 | 248 | Protein maestro OS=Mus mu | no | no | 0.129 | 0.717 | 0.224 | 5e-07 | |
| Q9BYG7 | 248 | Protein maestro OS=Homo s | no | no | 0.145 | 0.806 | 0.197 | 4e-05 | |
| Q58DE2 | 263 | Protein maestro OS=Bos ta | no | no | 0.110 | 0.574 | 0.229 | 8e-05 |
| >sp|Q54F23|HTR7A_DICDI HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum GN=heatr7a PE=4 SV=1 | Back alignment and function desciption |
|---|
Score = 330 bits (847), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 324/1347 (24%), Positives = 600/1347 (44%), Gaps = 160/1347 (11%)
Query: 57 KRPLLLEAVKSLLD-EQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALSDQK 115
K+PL+L A+K L+ E +L ++K ++++I+ MA + YL G +E++V+ +
Sbjct: 394 KKPLILSAIKPLIQTEPSLFIKKYLAQIIIAMAPYGYLEMEGGLTLLEFIVKGSS----- 448
Query: 116 KYVNESSKVKIGAFCPT----------------ELRAICEKGLLLLTITIPEMQHILWPL 159
+ +S +IG PT ELR IC+ L L+T T+P+++ ILWP
Sbjct: 449 -WYQDS---EIGKAQPTQPPKKIENPDLHVTDSELRLICDNILNLITTTMPQLESILWPY 504
Query: 160 LLKMIIPRAYTSAAATVCRCISELC-RHRSSSSNVMLSECKARDDIPNPEELFARLVVLL 218
L + I+P YT+A V + ++ + +S S+ + ++P P ++ AR VLL
Sbjct: 505 LFEFILPEQYTAAIPVVTKSLTYIALSKKSVDSDDYYIDFDKEINLPKPTQIIARYFVLL 564
Query: 219 HDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQETWD 278
PL R Q +IL + + P+ +I W +PK+ +Y+ D D++ Q W+
Sbjct: 565 TAPLRRNQLGIRILENMKAIGPILHPSICDMWDVTLPKLISYLEDHTDIETWNKNQ--WE 622
Query: 279 DMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADRNY 338
++++ L+E++ + +W ++LGN+ +EQ Y D L++ +G+++QK + + +
Sbjct: 623 ELVLRLLSETIKNAADDEWTVALGNSMSEQIDHYKKDPILKRSLYKQMGLIMQKCSHKEF 682
Query: 339 VCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSF 398
V KI+ M+ + G A +G ASH D VLE + + N S+ ++
Sbjct: 683 VKSKIEVMFTSVDYTNSLENEGCAIGLGYCGASHFDIVLEKINFYIKN---SMVKK---- 735
Query: 399 FSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQA 458
S + + I + L GY+A YA S + +R++ V + +L ++ K +
Sbjct: 736 -SGFFGKKGPKGIKNCILLSLGYSATYAQSALFSSRVEVHVIQPIKPSILQLKKVPKKLS 794
Query: 459 VITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQALA 518
I IDL+G+A+ ++F K+RD+L+ +++ M + I+
Sbjct: 795 SIKMIDLIGKAL--HPNKASTFIFKQRDELMKLLISYMSTPPPSTNNQVKID-------G 845
Query: 519 LSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV----------VNPLIDNLITL 568
+AC+TLV +EP +++E ++ +L FF P + VN LI ++ L
Sbjct: 846 TNACSTLVNLEPMISLELEVQIINLSLSFFNQQVSPANATNTDSDEYKEVNSLITSVNNL 905
Query: 569 LCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGY 628
L IL ++ L ++ +D S + R RS + ++ KF I Y
Sbjct: 906 LSTILY-----NQTTIACLNRLIGYLDPLSRSKDAHIRERSLFCILYLVKKF-----IEY 955
Query: 629 CALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRK 688
+ ++P+ + S +G + + +PRC D + VR+
Sbjct: 956 ST-------------------DSDSMPTDKLFDS-----IGTTLSVLIPRCTDPEINVRR 991
Query: 689 ISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRI 748
+ + + + I L + + L+S+ D I + + +E F+ +
Sbjct: 992 YAVESIQLILYIGFMLKNATPDNRRVKPSEVLHPLTSIRDSI------TTTEVNEQFS-L 1044
Query: 749 VSSVCILLTK----DELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVS 804
V + ++++K +E+ L + D S G+ + + RG EL E V
Sbjct: 1045 VFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCIIINGLIKTRGEELIEY-VP 1103
Query: 805 RTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRG 864
+ LL+A IT + TL ++ LA N + V + +L
Sbjct: 1104 ILVKGLLTAMEGITSETTMNGTLVSLRSLA-NHHLIPVLSVLLE---------------- 1146
Query: 865 GWPMQDAFHAFSQHAVLS------FLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWID 918
+PM + H +++ L HL+ LN P + EK D + +
Sbjct: 1147 -YPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVYE---EKPDPKNKNRIIPQP 1202
Query: 919 DDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHG-------LASSGQH 971
I AA +L F+ ++ V+ Y +++ L L+ G+C+ +AS+
Sbjct: 1203 FAIALAATCSLGEIFQLTEV--EEVVKYFYHQLISTLVLRAGTCNNSLPCLIEVASTNPK 1260
Query: 972 E--------PLRAILTSFQAFCECVGDLE--MRKILARDG-EQNDKEKWINLIGDVAGCV 1020
P + +L +F+ F +C + E + +I ++ Q + + I ++ V
Sbjct: 1261 AKASAISLIPSQQMLVTFRQFFKCTKEEETLLAEIESKGSFSQLETPFYHQGIIEILSVV 1320
Query: 1021 SIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVS 1080
S P +Q I L R + +E + + L+++++ L +
Sbjct: 1321 SSHHPDLIQGIFQYLLPYQRSNHLEHRIVTISVTTELINHCKD-KELIQRLINTLLNSLV 1379
Query: 1081 DESPTVRGLCLRGLVQIPSIHIHQ---YATQVLSVILALLDDLDESVQLTAVSCLLTILK 1137
D P V+ + L+GL I S + Q YA V+ + +DD DE++ + + L I +
Sbjct: 1380 D--PLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSIDDQDETMAMECMLGLSKIFE 1437
Query: 1138 SSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAML 1197
+ + V PIL+N+ R+R N +R +F FG+L FG GS + F EQIH+ L
Sbjct: 1438 VADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLWRFGSGSACDPFYEQIHSSL 1497
Query: 1198 PRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFN--SHCFNSDH-RSDYETFVRD 1253
P LI+H+ DD SV+ +C+ TL Q++ M FN S F D+ + +YE F+ D
Sbjct: 1498 PSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNKSKGFVGDNDQPNYEEFLLD 1557
Query: 1254 LTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSILC-LCDDQHILSLFYTQV 1312
++ + ++P R++ ++ + I+ F++ W ++ NA F IL L +D+ + + +
Sbjct: 1558 FSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGFILGNLTEDKRTQTNINSTI 1617
Query: 1313 FGLLVVKLSQSADAIVRATCSSSLGWL 1339
+V L VR + SLG L
Sbjct: 1618 LTKSLVGLLAEKSPAVRKKAAESLGLL 1644
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Dictyostelium discoideum (taxid: 44689) |
| >sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo sapiens GN=HEATR7A PE=2 SV=3 | Back alignment and function description |
|---|
| >sp|A7E2Y6|HRT7A_BOVIN HEAT repeat-containing protein 7A OS=Bos taurus GN=HEATR7A PE=2 SV=1 | Back alignment and function description |
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| >sp|A6NES4|HTRB1_HUMAN HEAT repeat-containing protein 7B1 OS=Homo sapiens GN=HEATR7B1 PE=4 SV=3 | Back alignment and function description |
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| >sp|Q7Z745|HTRB2_HUMAN HEAT repeat-containing protein 7B2 OS=Homo sapiens GN=HEATR7B2 PE=2 SV=3 | Back alignment and function description |
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| >sp|D3Z750|HTRB1_MOUSE HEAT repeat-containing protein 7B1 OS=Mus musculus GN=Heatr7b1 PE=4 SV=2 | Back alignment and function description |
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| >sp|Q7M6Y6|HTRB2_MOUSE HEAT repeat-containing protein 7B2 OS=Mus musculus GN=Heatr7b2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7TNB4|MSTRO_MOUSE Protein maestro OS=Mus musculus GN=Mro PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9BYG7|MSTRO_HUMAN Protein maestro OS=Homo sapiens GN=MRO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q58DE2|MSTRO_BOVIN Protein maestro OS=Bos taurus GN=MRO PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1370 | ||||||
| 255556820 | 1722 | conserved hypothetical protein [Ricinus | 0.967 | 0.769 | 0.806 | 0.0 | |
| 297739996 | 1722 | unnamed protein product [Vitis vinifera] | 0.960 | 0.764 | 0.799 | 0.0 | |
| 359482278 | 1720 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.960 | 0.765 | 0.801 | 0.0 | |
| 356570788 | 1723 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.967 | 0.769 | 0.752 | 0.0 | |
| 240254592 | 1716 | uncharacterized protein [Arabidopsis tha | 0.964 | 0.769 | 0.732 | 0.0 | |
| 449451072 | 1712 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.959 | 0.767 | 0.753 | 0.0 | |
| 222624190 | 1687 | hypothetical protein OsJ_09403 [Oryza sa | 0.955 | 0.775 | 0.627 | 0.0 | |
| 218192091 | 1650 | hypothetical protein OsI_10014 [Oryza sa | 0.955 | 0.793 | 0.626 | 0.0 | |
| 357510847 | 1835 | HEAT repeat-containing protein 7A [Medic | 0.643 | 0.480 | 0.707 | 0.0 | |
| 168035831 | 1855 | predicted protein [Physcomitrella patens | 0.926 | 0.684 | 0.427 | 0.0 |
| >gi|255556820|ref|XP_002519443.1| conserved hypothetical protein [Ricinus communis] gi|223541306|gb|EEF42857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2231 bits (5780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1077/1336 (80%), Positives = 1203/1336 (90%), Gaps = 11/1336 (0%)
Query: 45 HFHWRSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEY 104
H RSSEAWH+KRPLL+E VKSLLDEQNL V++A+SELIVVMASHCYL+GPSGELF+EY
Sbjct: 387 HLLPRSSEAWHNKRPLLVEVVKSLLDEQNLGVRRALSELIVVMASHCYLVGPSGELFIEY 446
Query: 105 LVRHCALSDQKKYVNESSKV----------KIGAFCPTELRAICEKGLLLLTITIPEMQH 154
LVRHCALSD ++ ++SKV K+ +FCP ELR ICEKGLLLLTITIPEM++
Sbjct: 447 LVRHCALSDLERNDPDNSKVDSGSTCFLQVKLRSFCPIELRGICEKGLLLLTITIPEMEY 506
Query: 155 ILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARL 214
ILWP LL MIIPR YT A ATVCRCISELCRHRSS+ MLSECKAR DIP+PEELFARL
Sbjct: 507 ILWPFLLTMIIPRIYTGAVATVCRCISELCRHRSSNIGGMLSECKARPDIPSPEELFARL 566
Query: 215 VVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQ 274
+VLLHDPLAREQ AT IL VL YL+PL P NI++FWQDEIPKMKAYVSDTEDLKLDPSYQ
Sbjct: 567 LVLLHDPLAREQLATHILTVLCYLAPLLPKNINMFWQDEIPKMKAYVSDTEDLKLDPSYQ 626
Query: 275 ETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVA 334
ETWDDMIINFLAESLDV+Q+TDW+ISLGNAFT QY LYTPDD+H+ALLHRCLG+LLQKV
Sbjct: 627 ETWDDMIINFLAESLDVIQDTDWVISLGNAFTNQYELYTPDDEHAALLHRCLGMLLQKVD 686
Query: 335 DRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQR 394
+R YV +KIDWMYKQANIAIPTNRLGLAKAMGLVAASHLD VLE LK IL N+GQS+FQR
Sbjct: 687 NRAYVQNKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLEKLKEILANVGQSIFQR 746
Query: 395 LLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHT 454
LLS FS+SY+ EESDDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHVRHHT
Sbjct: 747 LLSLFSDSYKTEESDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVRHHT 806
Query: 455 AKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHT 514
AKQAVITAIDLLGRAVINAAENGASFPLK+RDQLLDYILTLMGR++ND FADSS+ELLHT
Sbjct: 807 AKQAVITAIDLLGRAVINAAENGASFPLKRRDQLLDYILTLMGRDDNDDFADSSLELLHT 866
Query: 515 QALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILL 574
QALALSACTTLV+VEPKLTIETRNHVMKATLGFFALPN+P+DVVNPLIDNLITLLCAILL
Sbjct: 867 QALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPNEPVDVVNPLIDNLITLLCAILL 926
Query: 575 TSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCH 634
TSGEDGRSRA+QLLHILRQID YVSSPVEYQRRR CLAV+EML+KFR LCV GYCA GCH
Sbjct: 927 TSGEDGRSRAEQLLHILRQIDHYVSSPVEYQRRRGCLAVHEMLIKFRMLCVSGYCAFGCH 986
Query: 635 GSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQIL 694
G+CTH KQIDR + NFSNLPSA+VLPSREALCLG R+ MYLPRCADT+SEVRK+SAQIL
Sbjct: 987 GNCTHSKQIDRTLHSNFSNLPSAFVLPSREALCLGERIFMYLPRCADTNSEVRKVSAQIL 1046
Query: 695 DQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCI 754
D+LFSISLSLP+P GSS G+D+EL Y ALSSLEDVIA+LRSDASIDPSEVFNRI+SSVC+
Sbjct: 1047 DKLFSISLSLPKPGGSSFGVDMELLYSALSSLEDVIAMLRSDASIDPSEVFNRIISSVCV 1106
Query: 755 LLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAA 814
LLTK+ELV TLH CT AICD+ K SAEGAIQAV+EFV+KRG ELSETDVSRTTQSLLSA
Sbjct: 1107 LLTKNELVVTLHGCTGAICDKIKPSAEGAIQAVIEFVSKRGKELSETDVSRTTQSLLSAV 1166
Query: 815 VHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHA 874
VH+T+KHLRLETLGAIS LAE+T+ KIVF+EVLATA +DIVTKDISRLRGGWPMQ+AF+A
Sbjct: 1167 VHVTEKHLRLETLGAISSLAESTSPKIVFDEVLATAARDIVTKDISRLRGGWPMQEAFYA 1226
Query: 875 FSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFR 934
FSQH VLSF FLEHL S LNQ+P +KGD+EKGD SSH AD I+DDILQAA+LALTAFFR
Sbjct: 1227 FSQHIVLSFQFLEHLTSVLNQSPVIKGDLEKGDSSSHFADGQIEDDILQAAVLALTAFFR 1286
Query: 935 GGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCECVGDLEMR 994
GGGKVGKKAVE++YA VLAAL LQ GSCHGLASSG+HEPLRA+LT+FQAFCECVGDLEM
Sbjct: 1287 GGGKVGKKAVEQNYASVLAALILQFGSCHGLASSGRHEPLRALLTAFQAFCECVGDLEMG 1346
Query: 995 KILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAAL 1054
KILARDGEQN+K KWI LIG VAG +SIKRPKEVQTI LILTKS+NR Q FQREAAAA+L
Sbjct: 1347 KILARDGEQNEKVKWITLIGGVAGNISIKRPKEVQTISLILTKSLNRHQSFQREAAAASL 1406
Query: 1055 SEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVIL 1114
SEFVRYSGGF SLL++MVEALCRHVSDESPTVR LCLRGLVQIPSIHI QY TQ+LSVI+
Sbjct: 1407 SEFVRYSGGFTSLLDEMVEALCRHVSDESPTVRCLCLRGLVQIPSIHICQYTTQILSVIV 1466
Query: 1115 ALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAF 1174
ALLDD DESVQLTAVSCLLT+L+SS DAV+PILLNLSVRLRNLQ+ MN K+R AFAAF
Sbjct: 1467 ALLDDSDESVQLTAVSCLLTVLESSPNDAVDPILLNLSVRLRNLQICMNTKIRATAFAAF 1526
Query: 1175 GALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGI 1233
GALS++G G+Q E FLEQIHA +PRL+LH++DDD+SVRQACRNTLK++AP +E+ G+ +
Sbjct: 1527 GALSSYGAGTQHEIFLEQIHAAIPRLVLHLHDDDISVRQACRNTLKRIAPLVEMEGLAAL 1586
Query: 1234 FNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSS 1293
FNSHCF S++RSDYE F+RD T+QF QH PSR+D+YM S IQA EAPWP+IQANAIY +S
Sbjct: 1587 FNSHCFTSENRSDYEDFLRDFTKQFSQHLPSRVDTYMASAIQALEAPWPVIQANAIYLAS 1646
Query: 1294 SILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKSINSHSWRSTRL 1353
S+L L DDQHIL+L+Y QVFGLLV K+S+SADA++RATCSS+LG LLKS N SWR+ RL
Sbjct: 1647 SLLSLSDDQHILALYYAQVFGLLVGKMSRSADAVIRATCSSALGLLLKSTNFLSWRAARL 1706
Query: 1354 ERVESFRWGYESESTK 1369
+RVESFR G++SES K
Sbjct: 1707 DRVESFRRGHDSESKK 1722
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739996|emb|CBI30178.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482278|ref|XP_003632748.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356570788|ref|XP_003553566.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|240254592|ref|NP_181219.4| uncharacterized protein [Arabidopsis thaliana] gi|330254206|gb|AEC09300.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449451072|ref|XP_004143286.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] gi|449482389|ref|XP_004156267.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|222624190|gb|EEE58322.1| hypothetical protein OsJ_09403 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|218192091|gb|EEC74518.1| hypothetical protein OsI_10014 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|357510847|ref|XP_003625712.1| HEAT repeat-containing protein 7A [Medicago truncatula] gi|355500727|gb|AES81930.1| HEAT repeat-containing protein 7A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|168035831|ref|XP_001770412.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678289|gb|EDQ64749.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1370 | ||||||
| TAIR|locus:2040585 | 1716 | AT2G36810 [Arabidopsis thalian | 0.959 | 0.765 | 0.723 | 0.0 | |
| DICTYBASE|DDB_G0291161 | 1647 | DDB_G0291161 "HEAT repeat-cont | 0.397 | 0.330 | 0.250 | 1.4e-73 | |
| MGI|MGI:3705228 | 1679 | Mroh2a "maestro heat-like repe | 0.340 | 0.277 | 0.224 | 4.3e-22 | |
| MGI|MGI:1921905 | 1581 | Mroh2b "maestro heat-like repe | 0.341 | 0.296 | 0.216 | 2.2e-20 | |
| FB|FBgn0040236 | 1742 | c11.1 "c11.1" [Drosophila mela | 0.190 | 0.149 | 0.213 | 1.7e-19 | |
| MGI|MGI:2152817 | 248 | Mro "maestro" [Mus musculus (t | 0.129 | 0.717 | 0.224 | 1.6e-06 | |
| UNIPROTKB|F1RPP0 | 245 | MRO "Uncharacterized protein" | 0.114 | 0.640 | 0.243 | 1e-05 | |
| UNIPROTKB|F1PAY1 | 248 | MRO "Uncharacterized protein" | 0.116 | 0.641 | 0.230 | 2.3e-05 | |
| UNIPROTKB|Q9BYG7 | 248 | MRO "Protein maestro" [Homo sa | 0.116 | 0.645 | 0.216 | 6.7e-05 | |
| UNIPROTKB|E9PAT5 | 262 | MRO "Protein maestro" [Homo sa | 0.116 | 0.610 | 0.216 | 7.9e-05 |
| TAIR|locus:2040585 AT2G36810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4949 (1747.2 bits), Expect = 0., P = 0.
Identities = 966/1336 (72%), Positives = 1128/1336 (84%)
Query: 49 RSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRH 108
R EAWHSKRPLL++ SLLDEQ+LAV+KA+SELIVVMASHCYL+GPSGELFVEYLVRH
Sbjct: 389 RLFEAWHSKRPLLVDTASSLLDEQSLAVRKALSELIVVMASHCYLVGPSGELFVEYLVRH 448
Query: 109 CALSDQKKYVNESSKVKIGAFCPTELRAICEKGLLLLTITIPEM-------------QHI 155
A+ + ++ K K PT+LRA+C KGLLLLT+TIPEM Q+I
Sbjct: 449 SAIGE-----SDHLKAKGELVSPTQLRAVCGKGLLLLTVTIPEMELSDFNAKEYMKLQYI 503
Query: 156 LWPLLLKMIIPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARLV 215
LWP LLKMIIP+ YT A A+VCRCI+ELCR RSS++ ML ECKAR DIPNPEELF RLV
Sbjct: 504 LWPFLLKMIIPKVYTGAVASVCRCITELCRRRSSTTP-MLIECKARADIPNPEELFTRLV 562
Query: 216 VLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQE 275
VLLH+PLA+EQ A+QIL VL YLSPLFP NI +FWQDEIPKMKAYV DTEDLKLDP+YQE
Sbjct: 563 VLLHNPLAKEQLASQILTVLGYLSPLFPKNISMFWQDEIPKMKAYVYDTEDLKLDPTYQE 622
Query: 276 TWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVAD 335
TWDDMIINFLAESLDV Q+ DW+ISLGN+F +QY+LY PDDDH+ALLHRC+GILLQKV D
Sbjct: 623 TWDDMIINFLAESLDVTQDADWVISLGNSFAKQYILYAPDDDHAALLHRCIGILLQKVND 682
Query: 336 RNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRL 395
R YV DKIDWMY+QA+I+IP NRLGLAKAMGLVAASHLD VLE LK I+DN+GQS+FQR+
Sbjct: 683 RAYVRDKIDWMYEQADISIPANRLGLAKAMGLVAASHLDTVLEKLKIIVDNVGQSIFQRI 742
Query: 396 LSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTA 455
LS FS SY+ E+SDDIHAALALMYGYAAKYAPS+VIEARIDALVGTNMLSRLLHVR TA
Sbjct: 743 LSLFSESYKTEDSDDIHAALALMYGYAAKYAPSSVIEARIDALVGTNMLSRLLHVRQQTA 802
Query: 456 KQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQ 515
KQAVITAIDLLGRAVINAAE GA+FPLK+RDQ+LDYILTLMGR+EN+ FA+SS+E+LHTQ
Sbjct: 803 KQAVITAIDLLGRAVINAAETGATFPLKRRDQMLDYILTLMGRDENEGFAESSLEVLHTQ 862
Query: 516 ALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILLT 575
ALAL+ACTTLV+VEPKLTIETRN VMKATLGFFALPNDP DV++PLIDNL+TLLCAILLT
Sbjct: 863 ALALNACTTLVSVEPKLTIETRNRVMKATLGFFALPNDPSDVISPLIDNLVTLLCAILLT 922
Query: 576 SGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHG 635
SGEDGRSRA+QLLH+LRQ+DQYVSSP++YQR+R C+AV+EMLLKFR LCV GYCALGC G
Sbjct: 923 SGEDGRSRAEQLLHLLRQLDQYVSSPIDYQRKRGCVAVHEMLLKFRKLCVGGYCALGCSG 982
Query: 636 SCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILD 695
C H K DR++ GNFSNLPS ++ P RE LCLG+RVI YLPRCADT+SEVRKISAQILD
Sbjct: 983 DCPHRKYADRSMQGNFSNLPSVFLFPDREVLCLGDRVITYLPRCADTNSEVRKISAQILD 1042
Query: 696 QLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCIL 755
Q FSISLSLP+ V +SG+D E SY ALSSLEDVIAIL+SDASIDPSEVFNRIVSS+C L
Sbjct: 1043 QFFSISLSLPKAV-LTSGLDSEDSYKALSSLEDVIAILKSDASIDPSEVFNRIVSSICSL 1101
Query: 756 LTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAV 815
LT+ ELVA LHSCT AICD+ +QSAEGAIQAV EFV++RG++LS+ D+SRTT SLLSAAV
Sbjct: 1102 LTEHELVAALHSCTAAICDKIRQSAEGAIQAVTEFVSRRGSQLSDNDISRTTHSLLSAAV 1161
Query: 816 HITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAF 875
HITDK+LR+E +GAIS LAENT S IVFNEVLATAGKDIVTKDI+R+RGGWPMQDAF+AF
Sbjct: 1162 HITDKNLRVEAIGAISALAENTQSSIVFNEVLATAGKDIVTKDITRMRGGWPMQDAFYAF 1221
Query: 876 SQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRX 935
SQH LS LF+EHLIS LN++ VK D KG+ +S S++T ++DDILQAAI ALTAFFR
Sbjct: 1222 SQHTELSVLFMEHLISILNRSSLVKSDSHKGENTSSSSETHVEDDILQAAIFALTAFFRG 1281
Query: 936 XXXXXXXXXXXSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCECVGDLEMRK 995
SY+ V+ ALTLQLGSCHGLASSGQ +PLR +LTSFQAFCECVGDLEM K
Sbjct: 1282 GGKIGKKAVEKSYSSVVGALTLQLGSCHGLASSGQQDPLRVLLTSFQAFCECVGDLEMGK 1341
Query: 996 ILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREXXXXXLS 1055
ILAR+GEQ +KEKW+ LIGD+AGC+SIKRPKEV+ IC+ILTK++NR QRFQRE LS
Sbjct: 1342 ILARNGEQIEKEKWVGLIGDIAGCISIKRPKEVRHICMILTKALNRPQRFQREAAAAALS 1401
Query: 1056 EFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILA 1115
EF+RYSG F S++E+MVEALCRHVSD+SPTVR LCLRGLVQ+PS + Y TQV+ VILA
Sbjct: 1402 EFIRYSGDFSSVMEEMVEALCRHVSDDSPTVRRLCLRGLVQMPSACMSHYTTQVIGVILA 1461
Query: 1116 LLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFG 1175
LLDDLDESVQLTAVSCLL + +S+S DAVEPILLNLSVRLRNLQVSM+ KMR NAF+A G
Sbjct: 1462 LLDDLDESVQLTAVSCLLMVTESASNDAVEPILLNLSVRLRNLQVSMDPKMRANAFSALG 1521
Query: 1176 ALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEIGVYG-IF 1234
ALS + G QRE F+EQIH+ LPRL++H++DDD S+RQACR TLK+ AP ++I Y ++
Sbjct: 1522 ALSKYATGGQREGFVEQIHSTLPRLVVHLHDDDPSIRQACRVTLKRFAPLVDIINYSTLY 1581
Query: 1235 NSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSS 1294
+S F S+ R+DYE FVRDL++ VQ R+D+YM STIQAF+APWP+IQANAI+FS++
Sbjct: 1582 DSRAFGSEDRTDYENFVRDLSKHLVQE-SERVDTYMASTIQAFDAPWPVIQANAIHFSTT 1640
Query: 1295 ILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKSINSHSWRSTRLE 1354
+L L +DQHI+SL+Y QVF LV K+++S D++VRA CSS+ G LL+S S WR RL+
Sbjct: 1641 MLSLSEDQHIISLYYPQVFETLVSKMTRSQDSVVRAACSSAFGLLLRSSKSTLWRGARLD 1700
Query: 1355 RVESFRWGYESESTKK 1370
+S R + ES KK
Sbjct: 1701 GTDSGRKANDLESVKK 1716
|
|
| DICTYBASE|DDB_G0291161 DDB_G0291161 "HEAT repeat-containing protein 7A" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:3705228 Mroh2a "maestro heat-like repeat family member 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1921905 Mroh2b "maestro heat-like repeat family member 2B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0040236 c11.1 "c11.1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2152817 Mro "maestro" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RPP0 MRO "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PAY1 MRO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BYG7 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PAT5 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00000588001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (1471 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1370 | |||
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 99.57 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.29 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.17 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.06 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.02 | |
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 98.98 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.93 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.88 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.73 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.71 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.61 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.54 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.37 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 98.36 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 98.34 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.33 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.31 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 98.15 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.14 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.13 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 97.99 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.95 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.92 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 97.82 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 97.76 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.73 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.71 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.64 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.55 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 97.5 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.46 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 97.43 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.39 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 97.39 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.36 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.31 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.2 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.19 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 97.16 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 97.14 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.0 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 96.92 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 96.87 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.85 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 96.84 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 96.74 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 96.5 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 96.49 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 96.24 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 96.22 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.22 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 96.17 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.16 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 96.13 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 95.9 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.89 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 95.85 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 95.77 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 95.73 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 95.7 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 95.68 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.62 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 95.45 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 95.44 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 95.43 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 95.43 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 95.4 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 95.32 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 95.29 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 95.24 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 95.17 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 95.16 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 95.13 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 95.07 | |
| KOG2062 | 929 | consensus 26S proteasome regulatory complex, subun | 94.94 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 94.93 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 94.82 | |
| PF14225 | 262 | MOR2-PAG1_C: Cell morphogenesis C-terminal | 94.81 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 94.51 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 94.25 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 94.18 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 94.08 | |
| KOG1077 | 938 | consensus Vesicle coat complex AP-2, alpha subunit | 93.85 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 93.85 | |
| KOG1991 | 1010 | consensus Nuclear transport receptor RANBP7/RANBP8 | 93.42 | |
| KOG2274 | 1005 | consensus Predicted importin 9 [Intracellular traf | 93.18 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 93.16 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 93.15 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 93.03 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 92.48 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 92.35 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 92.31 | |
| COG5064 | 526 | SRP1 Karyopherin (importin) alpha [Intracellular t | 92.19 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 91.97 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 91.62 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 91.5 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 91.31 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 91.26 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 91.16 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 90.85 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 90.72 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 90.53 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 90.51 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 90.29 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 89.56 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 89.27 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 89.23 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 89.01 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 88.74 | |
| KOG4535 | 728 | consensus HEAT and armadillo repeat-containing pro | 88.74 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 88.67 | |
| PF12830 | 187 | Nipped-B_C: Sister chromatid cohesion C-terminus | 88.44 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 88.26 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 87.85 | |
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 87.77 | |
| KOG0803 | 1312 | consensus Predicted E3 ubiquitin ligase [Posttrans | 87.66 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 87.47 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 87.45 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 87.36 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 86.93 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 86.75 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 86.38 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 86.27 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 86.22 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 85.74 | |
| smart00802 | 107 | UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. | 85.65 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 85.61 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 85.27 | |
| PF08167 | 165 | RIX1: rRNA processing/ribosome biogenesis | 85.08 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 84.86 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 84.52 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 84.39 | |
| PF14868 | 559 | DUF4487: Domain of unknown function (DUF4487) | 84.07 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 82.41 | |
| PF03224 | 312 | V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 | 82.1 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 81.9 | |
| KOG1293 | 678 | consensus Proteins containing armadillo/beta-caten | 81.37 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 80.78 | |
| COG5231 | 432 | VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene | 80.59 |
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-55 Score=498.96 Aligned_cols=491 Identities=20% Similarity=0.198 Sum_probs=447.0
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHhhhcccchhhhhccccCCCCchh----HHHHhhcCcccHHHHHHHHHHHHccCCC
Q 000655 823 RLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQD----AFHAFSQHAVLSFLFLEHLISALNQTPF 898 (1370)
Q Consensus 823 r~~~l~ai~~La~~h~~~vV~~~Ll~~~~~~~~~~~~~~L~~~lP~d~----~W~ala~d~~l~~~vL~~LL~~L~~~p~ 898 (1370)
-+....++.++...|.-.++ .+. +.+++|.+. .|..+.-.+....++|++++..+.. ..
T Consensus 11 lqa~qdsv~l~h~~h~~a~~-~~~---------------~s~~l~~~s~i~a~~~~~~~pl~~rdq~l~~i~~~mg~-~~ 73 (533)
T KOG2032|consen 11 LEARQDSVVLLHVRHQTAKQ-AVI---------------TAIDLLGRSVINAAETGATFPLKRRDQMLDYILTLMGR-EG 73 (533)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHH---------------HcccccchHHHHHHHhhcCCchhhHHHHHHHHHHhhch-hh
Confidence 34455566677777755544 333 578899887 7999999999999999999998776 11
Q ss_pred ccCCCccCCCCCCCCCCCccchHHHHHHHHHHHHHhcCCcchHHHHHHhhHHHHHHHHHHhhhcccCCCCC---------
Q 000655 899 VKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSG--------- 969 (1370)
Q Consensus 899 ~~e~~~~~~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~fp~Lf~aLL~ql~~~~~~~~~~--------- 969 (1370)
.++++..+...++++.++-||++++|+..+. +.+..|...||+||.-+|+..+++.|+..+.
T Consensus 74 -------~a~sl~~v~~~~a~~~~~~~t~vl~e~~lti--~~g~~v~~lypqlf~llLllvscvlg~k~p~~lqa~~r~~ 144 (533)
T KOG2032|consen 74 -------FAESLLEVLHTQALALNACTTLVLVEPKLTI--ETGNRVMKLYPQLFSLLLLLVSCVLGLKSPDSLQALSRLE 144 (533)
T ss_pred -------hhhhhcchhhhHHHHHHHHHHHHHHHHhhhh--hcCchHHHhhHHHHHHHHHHHHHHhhccCcccHHHHHHHH
Confidence 2223444555678899999999999999998 8899999999999999999999999986551
Q ss_pred --------CCChHHHHHHHHHHHHHhhcchHHHHHHHhcCC-CC---ChhhHHHHHHHHHhHhhhcCchhHHHHHHHHhh
Q 000655 970 --------QHEPLRAILTSFQAFCECVGDLEMRKILARDGE-QN---DKEKWINLIGDVAGCVSIKRPKEVQTICLILTK 1037 (1370)
Q Consensus 970 --------~~~P~~~aleAlk~ll~~~g~~~~~~~L~~~g~-W~---~~e~~~~gV~lLAr~m~~~~~~~~~~i~~~L~~ 1037 (1370)
...||+.+..+++.+...++.+.+.+..+..++ |. ++..|..|++-++|.|..+.+..++.|+.++..
T Consensus 145 ~~~al~~~~~~pc~~~tatl~cl~lqsa~e~~~~~sde~~~~w~qls~~~~h~~g~trlqr~m~~~~~~~~~~il~q~~s 224 (533)
T KOG2032|consen 145 DVIALLKSLVAPCHSCTATLCCLILQSAEEAIQAVSDEVSRRWSQLSDNDIHRVGLTRLQRFMACVQDLEMGKILAQLLS 224 (533)
T ss_pred hHHHHHHhhhhHHHHhHHHHHHHHHHHhHHHHHHhhhcccchhhhcccCcccHHHHHHHHHHHHhhCCccHHHHHhhccc
Confidence 578999999999999999999999999998876 98 899999999999999999999999999999999
Q ss_pred hhcccccCcchHHHHHHHHhhhcCCc-hhhHHHHHHHHHHhhcCCCChhHHHHHhhhccCCcch---hhhhhHHHHHHHH
Q 000655 1038 SINRQQRFQREAAAAALSEFVRYSGG-FDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSI---HIHQYATQVLSVI 1113 (1370)
Q Consensus 1038 ~L~s~~~~~Ri~a~af~sELl~~~~~-~~~l~~~~i~~L~~~l~D~~~~VR~lsLrGLgnl~~~---~v~~~~~~lL~al 1113 (1370)
...|..+.+|++.+|||+|+.+.+.. ...++++++..|.+..+|||..+|.+|+|||||++.+ |++.|.++++.++
T Consensus 225 s~ts~~~~~ritd~Af~ael~~~~~l~~~~lL~s~~~~la~ka~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldai 304 (533)
T KOG2032|consen 225 SITSEKENGRITDIAFFAELKRPKELDKTGLLGSVLLSLANKATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAI 304 (533)
T ss_pred ccchhcccchHHHHHHHHHHhCcccccccccHHHHHHHHHHhccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHH
Confidence 99999999999999999999998755 4577888999999999999999999999999999754 9999999999999
Q ss_pred HhhcccCC-hhHHHHHHHHHHHHhccCCcCCcchhHHhHHhhhcCcCcCCChHHHHHHHHHHHHhhccCCCcchHHHHHH
Q 000655 1114 LALLDDLD-ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQ 1192 (1370)
Q Consensus 1114 l~~L~d~d-~~V~leAm~~L~~lL~~l~~~~~~~~l~~i~~~lrpffede~~~vR~aAi~LfG~L~~~~~~~~~~~~~eQ 1192 (1370)
+.||+|.+ ++|++|||.+|.++++.....++++++++|+.|+|+||++|++++|.+||.+||+|+++++|++++.|.||
T Consensus 305 i~gL~D~~~~~V~leam~~Lt~v~~~~~~~~l~~~~l~ialrlR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~ 384 (533)
T KOG2032|consen 305 IRGLYDDLNEEVQLEAMKCLTMVLEKASNDDLESYLLNIALRLRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQ 384 (533)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHHHhhhhcchhhhchhHHHHHHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHH
Confidence 99999965 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHhccCCChhHHHHHHHHHHhhchhhhh-hhhhhhccccCCcCCCCChHHHHHHHHHHHHHhCcchHHHHHH
Q 000655 1193 IHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMG 1271 (1370)
Q Consensus 1193 v~~~LvpLLlHL~D~~~~V~~ack~tL~~~a~lL~w-~l~~lf~~~~~~~~~~l~~~~f~~~i~k~L~~~~~~~~~~~l~ 1271 (1370)
|.+.+.||++|++|++|.|+.|||.+++.|.+.+.. .+..+|+++. |+.-..+.+|++..|+.|...+||....++.
T Consensus 385 v~k~~~~lllhl~d~~p~va~ACr~~~~~c~p~l~rke~~~~~q~~l--d~~~~~~q~Fyn~~c~~L~~i~~d~l~~~~t 462 (533)
T KOG2032|consen 385 VKKRLAPLLLHLQDPNPYVARACRSELRTCYPNLVRKELYHLFQESL--DTDMARFQAFYNQWCIQLNHIHPDILMLLLT 462 (533)
T ss_pred HHhccccceeeeCCCChHHHHHHHHHHHhcCchhHHHHHHHHHhhhh--HHhHHHHHHHHHHHHHHHhhhCHHHHHHHHH
Confidence 999999999999999999999999999999999999 8999999874 4344489999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHhhhhccCchhhhhhccHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHH
Q 000655 1272 STIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKS 1342 (1370)
Q Consensus 1272 ~~l~y~kS~~~~IR~aA~~fiG~l~~~~~~~~~~~~~~e~l~~~L~~~Ll~Dpdp~VR~~Aa~aL~~l~k~ 1342 (1370)
....||+|.|+.+|.+|+.+.|...-++.++.+...|.+++..+|.. |.+||.|.|+..|.+|++.+.+.
T Consensus 463 ~~~~~f~sswe~vr~aavl~t~~~vd~l~~~~c~~~d~~qL~~~ls~-l~~dp~pev~~~a~~al~~l~~~ 532 (533)
T KOG2032|consen 463 EDQHIFSSSWEQVREAAVLKTTRSVDSLVRAACSSADGLQLRSSLST-LWRDPRPEVTDSARKALDLLSVK 532 (533)
T ss_pred hchhheecchHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHH-HccCCCchhHHHHHHHhhhHhhc
Confidence 99999999999999999999999999999999999999999999999 89999999999999999998753
|
|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
| >KOG0803 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF08167 RIX1: rRNA processing/ribosome biogenesis | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >PF14868 DUF4487: Domain of unknown function (DUF4487) | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only] | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Score = 72.4 bits (176), Expect = 7e-13
Identities = 124/1062 (11%), Positives = 295/1062 (27%), Gaps = 92/1062 (8%)
Query: 194 MLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDE 253
L + + D + ++ ++ LL D Q + L PL + +
Sbjct: 33 ELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNL-----AVKCLGPLVSKVKEYQVETI 87
Query: 254 IPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQ---YV 310
+ + + ++ + + E + ++ T + +
Sbjct: 88 VDTLCTNMLSD-----KEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAI 142
Query: 311 LYTPDDDHSALLHRCLGILLQKVAD--RNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLV 368
D + +L + N+ + + Q R A+G +
Sbjct: 143 AKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHL 202
Query: 369 AASHLDAVL-----EMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAA 423
S + V +L + N S + + + R I L +
Sbjct: 203 VMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-GHRIGEYLEKIIPLVV 261
Query: 424 KYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLK 483
K+ E R + + V T I++ + + +
Sbjct: 262 KFCNVDDDELREYCI---QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 318
Query: 484 KRDQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKA 543
+ + + +D ++D + A +V+ ++ E V A
Sbjct: 319 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPA 378
Query: 544 TLGFFALPNDPI--DVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILR-QIDQYVSS 600
+ F + + DV + + L D + + L +L+ Q+ V +
Sbjct: 379 LISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKA 438
Query: 601 PVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPS---- 656
+ + +S L + AL HI + ++ + ++ S
Sbjct: 439 LHKQMKEKSVKTRQCCFNMLTELVNVLPGAL-----TQHIPVLVPGIIFSLNDKSSSSNL 493
Query: 657 --------AYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPV 708
+L + V +P + + + + RP+
Sbjct: 494 KIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPL 553
Query: 709 GSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLHSC 768
S D L I L++ + I D L + L +
Sbjct: 554 DQPSSFDATPYIKDL--FTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNT 611
Query: 769 TTAICDRTKQSAE-GAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAVHITDKHLRLETL 827
+R K + + ++ V +L++ + + L+L TL
Sbjct: 612 LQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTL 671
Query: 828 GAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLE 887
A+ L +N + + + D V ++ L M + A S L+ ++
Sbjct: 672 SALDILIKNYSDSLTAAMI------DAVLDELPPLISESDMHVSQMAISFLTTLAKVYPS 725
Query: 888 HLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKS 947
L + + A+ A+ FF+ +
Sbjct: 726 SLSKISGS------------ILNELIGLVRSPLLQGGALSAMLDFFQ---ALVVTGTNNL 770
Query: 948 YAPVLAALTLQLGSCHGLASSGQHEPLR------AILTSFQAFCECVGDLEMRKILARDG 1001
L + A + + A+ + V ++ +
Sbjct: 771 GYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRS 830
Query: 1002 EQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYS 1061
+ + + +G+V + + E++++ L S + + + AA+ AL
Sbjct: 831 TDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVK---SAASYALGSIS--V 885
Query: 1062 GGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLD 1121
G L +++ + + + L + + + Y + +++L + +
Sbjct: 886 GNLPEYLPFVLQEITSQPKRQYLLLHSLKEI-ISSASVVGLKPYVENIWALLLKHCECAE 944
Query: 1122 ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFG 1181
E + CL + + + + L S + R + A
Sbjct: 945 EGTRNVVAECLGKLTLIDPETLLPRLKGYLI--------SGSSYARSSVVTAVKFT---- 992
Query: 1182 VGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVA 1223
+ + + + + + D DL+VR+ T A
Sbjct: 993 ISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAA 1034
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Length = 800 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Length = 462 | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1370 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 4e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-05 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 9e-04 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 3e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.001 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 1e-08
Identities = 96/853 (11%), Positives = 207/853 (24%), Gaps = 51/853 (5%)
Query: 375 AVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEAR 434
+ L ++ + G +F L+ + +S ++ A + E
Sbjct: 191 RTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYL 250
Query: 435 IDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILT 494
+ ++ + +V ++ I A + R +++ L
Sbjct: 251 EKII---PLVVKFCNVDDDELREYCIQAFESFVRRCPKEVY-------PHVSTIINICLK 300
Query: 495 LMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLG-FFALPND 553
+ + N ++ D + A E + V +A A+ +
Sbjct: 301 YLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVST 360
Query: 554 PIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAV 613
+++ + L + E+ ++ L + + V S +
Sbjct: 361 RHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGET 420
Query: 614 YEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVI 673
+L+ + ++ +Q +L VLP + V
Sbjct: 421 PLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTEL-----VNVLPGALTQHIPVLVP 475
Query: 674 MYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAIL 733
+ D S + + P+ + + I
Sbjct: 476 GIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSE 535
Query: 734 RSDASIDPSEVFNRIVSSVCILLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTK 793
+ +V + + L +CT E +A+
Sbjct: 536 ALLVTQQLVKVIRPLDQP--SSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCM--- 590
Query: 794 RGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKD 853
++ L + L + AG
Sbjct: 591 --------------GQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSP 636
Query: 854 IVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSA 913
+ L G P+ +F +Q A+ I N + + M
Sbjct: 637 LKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPP 696
Query: 914 DTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHEP 973
D + ++ + S L L G S+
Sbjct: 697 LISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFF 756
Query: 974 LRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICL 1033
++T + + ++ I ++ PKE +
Sbjct: 757 QALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVG 816
Query: 1034 ILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRG 1093
+ + + A LS S ++ + S S V+
Sbjct: 817 QFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYA 876
Query: 1094 LVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSV 1153
L I ++ +Y VL I Q + L I+ S+S ++P + N+
Sbjct: 877 LGSISVGNLPEYLPFVLQEI-----TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWA 931
Query: 1154 RLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQ 1213
L R G L+ L +LPRL ++ R
Sbjct: 932 LLLKHCECAEEGTRNVVAECLGKLT-----------LIDPETLLPRLKGYLISGSSYARS 980
Query: 1214 ACRNTLKQVAPFM 1226
+ +K
Sbjct: 981 SVVTAVKFTISDH 993
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1370 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.92 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.91 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.9 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.81 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.58 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.55 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.54 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.53 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.53 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.51 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.33 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 99.27 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.22 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.22 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.2 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.13 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.13 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.12 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.07 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 99.04 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 98.93 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.58 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.56 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.4 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 98.3 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 98.03 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 98.03 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.96 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.93 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.53 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.3 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 97.19 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 94.57 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 84.53 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.9e-16 Score=124.55 Aligned_cols=1045 Identities=13% Similarity=0.107 Sum_probs=432.3
Q ss_pred HCCCCHHHHC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 2079045511-258899998664200377899999999999861264236655432010100233357412123454445
Q 000655 47 HWRSSEAWHS-KRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKVK 125 (1370)
Q Consensus 47 ins~~~~~~~-k~~~i~~~vk~~l~d~~~kVr~al~~~I~ama~~~yl~~~~g~~~i~fiv~q~~~~~~~~~~~~~~~~~ 125 (1370)
++.....+++ ....|+..+-..|.|+|.+||.+-++.+..++.+. ++..++.++....-. . ..
T Consensus 31 l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~------~~~~~~~l~~~L~~~---l---~~---- 94 (1207)
T d1u6gc_ 31 LQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV------KEYQVETIVDTLCTN---M---LS---- 94 (1207)
T ss_dssp TSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS------CHHHHHHHHHHHHHH---T---TC----
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHH---H---CC----
T ss_conf 7230144576889999999999967998799999999999999767------686699999999998---5---68----
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 6788904799998854667611301------34471489977420----5736733122288999999974136898644
Q 000655 126 IGAFCPTELRAICEKGLLLLTITIP------EMQHILWPLLLKMI----IPRAYTSAAATVCRCISELCRHRSSSSNVML 195 (1370)
Q Consensus 126 ~~~~~~~~lr~~c~~~L~lltttV~------~m~~~LWP~LL~~i----~p~~yT~al~~ick~l~~La~k~~~~~~~~~ 195 (1370)
....+|..+..+|..+....+ .+...+++.++..+ ...+-...-...+..+..++.+.. .
T Consensus 95 ----~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g---~--- 164 (1207)
T d1u6gc_ 95 ----DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG---G--- 164 (1207)
T ss_dssp ----SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC---S---
T ss_pred ----CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---H---
T ss_conf ----963265999999999999663200231127889999999998763477778999999999999998756---7---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
Q ss_conf 44457789998799999999982597454045999999998609989840133477518878720025776778951474
Q 000655 196 SECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQE 275 (1370)
Q Consensus 196 ~~~~~~~~lPsp~~llaRllvl~~~P~~~~~rg~~~L~lL~~l~~~ih~~l~~~W~~~IP~L~~~L~~~~~~~~~~~~~~ 275 (1370)
.-.|.-..++..++-.+.+|...- -..++..|..+...+... ....-++.+++.+..+.. .....
T Consensus 165 ------~l~~~~~~il~~l~~~l~~~~~~v--R~~A~~~l~~l~~~~~~~---~~~~~~~~ll~~l~~~~~----~~~~~ 229 (1207)
T d1u6gc_ 165 ------LLVNFHPSILTCLLPQLTSPRLAV--RKRTIIALGHLVMSCGNI---VFVDLIEHLLSELSKNDS----MSTTR 229 (1207)
T ss_dssp ------SCTTTHHHHHHHHGGGGGCSSHHH--HHHHHHHHHHHTTTC-------CTTHHHHHHHHHHHTCS----SCSCT
T ss_pred ------HHHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHCCCCC----HHHHH
T ss_conf ------668779999999998808999899--999999999999877998---799999999998705998----89999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHCCCC
Q ss_conf 2999999999983401156708999999998422028999366779999999998721794--58999999998821878
Q 000655 276 TWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADR--NYVCDKIDWMYKQANIA 353 (1370)
Q Consensus 276 ~We~~Ll~fL~~sl~~i~d~~W~~~L~~el~~q~~~y~~~~~eK~fL~k~lG~~L~~~~~~--~~V~~~L~~ll~~~~~~ 353 (1370)
.+-..+-.+.+..=..+.. ....+..-+.+-+. .+++.-+..-.++++.....+.+. .+...-+..++....|.
T Consensus 230 ~~~~~l~~l~~~~~~~~~~--~l~~i~~~l~~~l~--~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~d 305 (1207)
T d1u6gc_ 230 TYIQCIAAISRQAGHRIGE--YLEKIIPLVVKFCN--VDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYD 305 (1207)
T ss_dssp THHHHHHHHHHHSSGGGTT--SCTTHHHHHHHHHS--SCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999876154677--79999999998825--8617778999999999998674654455999999999987407
Q ss_pred CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 86211469999999962168999999999885100222100110025653320058799999998999983099335799
Q 000655 354 IPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEA 433 (1370)
Q Consensus 354 ~~~ereG~A~~~G~~A~~Hld~VL~~L~~~~~~~~~~~~~~~l~~~k~~~~~~e~~~~ks~l~l~YG~va~~ap~~~il~ 433 (1370)
............+.....+.+.. . . ..-..+.+. +....++|.....+.+.++...| +.+..
T Consensus 306 p~~~~~~~~~~~~~~~~~~~~~~--------~----~---~~~~~~~~~--~d~s~~vR~~a~~~L~~l~~~~~-~~l~~ 367 (1207)
T d1u6gc_ 306 PNYNYDDEDEDENAMDADGGDDD--------D----Q---GSDDEYSDD--DDMSWKVRRAAAKCLDAVVSTRH-EMLPE 367 (1207)
T ss_dssp -----------------------------------------------------CTTHHHHHHHHHHHHHHTTCC-TTHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHH--------H----H---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 30003467887765554011013--------5----6---678887522--01338999999999986898889-99999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCH-------HHHHHHHHHHHCCCCC
Q ss_conf 99776655567553103674689999999999999987422159976-----88777-------9999999998435889
Q 000655 434 RIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASF-----PLKKR-------DQLLDYILTLMGREEN 501 (1370)
Q Consensus 434 rve~~I~~~i~~~~~~~kd~~~K~s~l~si~~i~~ai~~~~~~~~~f-----~f~~k-------~eLl~~l~~~i~~ep~ 501 (1370)
.++. +...++..+ ..+++.++.+.+.++..+.+............ ..... +.++..+...++...
T Consensus 368 ~~~~-~~~~L~~~l-~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~~~- 444 (1207)
T d1u6gc_ 368 FYKT-VSPALISRF-KEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKS- 444 (1207)
T ss_dssp HHTT-THHHHHSTT-SCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSC-
T ss_pred HHHH-HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf 9999-999999984-5985489999999999999730321255515488876302699999876999999999864886-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 87788245667699999999543103588888468999988735132268999221799999999999999601588987
Q 000655 502 DSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGR 581 (1370)
Q Consensus 502 ~~l~s~~~~l~~vr~~al~a~t~L~~L~P~l~~e~~~~ll~~c~~~~~lp~~~~~l~~~~~~aL~~lL~~ll~~~~~d~~ 581 (1370)
.++|+.++.++..+.+.-|..-.+....++...+..+.-+..+......+...+ ..++..... +
T Consensus 445 ----------~~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~~~~al~~l----~~l~~~~~~--~ 508 (1207)
T d1u6gc_ 445 ----------VKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCL----YVILCNHSP--Q 508 (1207)
T ss_dssp ----------HHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHH----HHHHHSSCG--G
T ss_pred ----------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH----HHHHHHCCH--H
T ss_conf ----------567888999999999972257777667567899999760264168889999999----999872267--8
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 74899999999777885192588765799999999999883220134457888876512344442103577899765677
Q 000655 582 SRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLP 661 (1370)
Q Consensus 582 ~~~~~L~~il~~L~pwl~S~~~~eReRA~~~~~~lL~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ps~f~~~ 661 (1370)
.....+..+...+..-+.......+..|......+.+.+.. . ..... +.
T Consensus 509 ~~~~~~~~l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~----------------~-----------~~~~~--~~-- 557 (1207)
T d1u6gc_ 509 VFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRP----------------L-----------DQPSS--FD-- 557 (1207)
T ss_dssp GGHHHHTTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCC----------------S-----------SSCCC--CC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH----------------H-----------CCCHH--HH--
T ss_conf 89999876334688887123088999999999988987500----------------0-----------11025--54--
Q ss_pred CHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCC
Q ss_conf 123334556889852465--689935999899999999998820999889988862122255522008999974049999
Q 000655 662 SREALCLGNRVIMYLPRC--ADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASI 739 (1370)
Q Consensus 662 ~~~~~~lG~Lvg~l~prC--~D~~~~iR~~A~~~i~~Ll~I~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~ 739 (1370)
-...+..+...+..++ .|.+.++|..|+.|+..+..-.. . ... .+. ...+..+- +.+.. .
T Consensus 558 --~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~~~~---~--~~~----~~~-~~~l~~l~---~~l~~---~ 619 (1207)
T d1u6gc_ 558 --ATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLG---D--NLG----SDL-PNTLQIFL---ERLKN---E 619 (1207)
T ss_dssp --CHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTG---G--GCC----THH-HHHHHHHH---HHTTS---S
T ss_pred --HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---H--HHH----HHH-HHHHHHHH---HHHCC---H
T ss_conf --47889999999999987313101788989999998988765---5--658----888-88877788---87423---0
Q ss_pred CHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 90689999999997009----95689999999998325899012899999999998610365440106359999999873
Q 000655 740 DPSEVFNRIVSSVCILL----TKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAV 815 (1370)
Q Consensus 740 ~~~~~~~~i~~~i~k~L----~~~el~~li~~ll~~L~d~~~~~~~aA~~~L~~~l~~rG~~L~e~dV~~I~~~I~~~l~ 815 (1370)
............+...- -...+...+..+...+.+.+.....++...+..+++..++.+.. ...+.+...+.
T Consensus 620 ~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~r~~al~~L~~l~~~~~~~~~~----~~~~~~l~~l~ 695 (1207)
T d1u6gc_ 620 ITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTA----AMIDAVLDELP 695 (1207)
T ss_dssp SHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTCCH----HHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH----HHHHHHHHHHC
T ss_conf 45799999999998731321478999888889877501443889999999999999845421006----77766777632
Q ss_pred ---HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf ---11708899999999999741057335899998421454101000001599882158998300812089999999999
Q 000655 816 ---HITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISA 892 (1370)
Q Consensus 816 ---~i~~~~~r~~~l~ai~~La~~h~~~VV~~~Ll~~~~~~~~~~~~~~L~~~lP~d~~W~al~~d~~l~~~vL~~LL~~ 892 (1370)
.-.+.+++..++..+..++..++..+. . ....++..++..
T Consensus 696 ~ll~~~d~~v~~~~l~~l~~l~~~~~~~~~-~------------------------------------~~~~il~~l~~~ 738 (1207)
T d1u6gc_ 696 PLISESDMHVSQMAISFLTTLAKVYPSSLS-K------------------------------------ISGSILNELIGL 738 (1207)
T ss_dssp GGSCTTCHHHHHHHHHHHHHHTTSCGGGGG-G------------------------------------TTTTTHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCHHHH-H------------------------------------HHHHHHHHHHHH
T ss_conf 444344078899999998888862633446-6------------------------------------788889999998
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 70599856777668888888888755137999999999987148832188899852799999999765114689889987
Q 000655 893 LNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHE 972 (1370)
Q Consensus 893 L~~~p~~~e~~~~~~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~fp~Ll~aLL~ql~~~~~~~~~~~~~ 972 (1370)
+... .. ......+..++...+...+ .. ...+..++..| ... ..........
T Consensus 739 ~~s~-l~-------------------~~~~~~~~~~~~~~l~~~~-~~----~~~~~~l~~~l-~~~---~~~~~~~~~~ 789 (1207)
T d1u6gc_ 739 VRSP-LL-------------------QGGALSAMLDFFQALVVTG-TN----NLGYMDLLRML-TGP---VYSQSTALTH 789 (1207)
T ss_dssp HTCT-TC-------------------CHHHHHHHHHHHHHHHTTC-CT----TCSHHHHHHHH-STT---TTTC----CC
T ss_pred HCCC-HH-------------------HHHHHHHHHHHHHHHHHCC-CC----CCCHHHHHHHH-HHH---HCCCCCHHHH
T ss_conf 6082-35-------------------5546999999999998606-66----54449999999-875---1254303457
Q ss_pred -H-HHHHHHHHHHHHHHHCCHHHHHHHHHC-CCC----CCHHHHHH---HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf -4-799999999999861566899999750-999----87564899---8999996764109522799999994421145
Q 000655 973 -P-LRAILTSFQAFCECVGDLEMRKILARD-GEQ----NDKEKWIN---LIGDVAGCVSIKRPKEVQTICLILTKSINRQ 1042 (1370)
Q Consensus 973 -P-~~~alealk~ll~~~g~~~~~~~Le~~-~~W----~~~~~~~~---gV~lLAr~l~~~~~~~~~~i~~~L~~~L~s~ 1042 (1370)
. ......++..+....+.. ....+..- ... ........ .++.+++.+ .....+.+...+...++++
T Consensus 790 ~~~~~~~~~~i~~l~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~al~~Lge~~~~~---~~~~~~~l~~~l~~~l~~~ 865 (1207)
T d1u6gc_ 790 KQSYYSIAKCVAALTRACPKE-GPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHI---DLSGQLELKSVILEAFSSP 865 (1207)
T ss_dssp HHHHHHHHHHHHHHHHHSCCC-SHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHS---CCCSCTHHHHHHHHGGGCS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHCCC
T ss_conf 889999999999999863266-799999999988434225999999999999999852---5311599999999980899
Q ss_pred CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHCC
Q ss_conf 65761688999998510678611089999999985308999358999852015775----11244337779999994204
Q 000655 1043 QRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIP----SIHIHQYATQVLSVILALLD 1118 (1370)
Q Consensus 1043 ~~~~Ri~a~aflsELl~~~~~~~~l~~~~i~~L~~~l~D~~~~VR~lalrGLgnl~----~~kv~~~~~~lL~all~gL~ 1118 (1370)
.+..|.+|+..+..+.... .. .. +..+.+.+ +.++..|...+.++..+. ......+.+.+++.+...+.
T Consensus 866 ~~~vr~aAa~aLg~l~~~~-~~-~~----lp~il~~l-~~~~~~~~~ll~al~ei~~~~~~~~~~~~~~~i~~~L~~~~~ 938 (1207)
T d1u6gc_ 866 SEEVKSAASYALGSISVGN-LP-EY----LPFVLQEI-TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCE 938 (1207)
T ss_dssp CHHHHHHHHHHHHHHHHHT-HH-HH----HHHHHHHH-HSCGGGHHHHHHHHHHHHHSSCSTTTHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHH-HH-HH----HHHHHHHH-HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 8899999999999999762-88-87----59999987-247358999999999999854555468789999999998817
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 68836899999999998512896875025786785312867679947899999999985301788615879999995566
Q 000655 1119 DLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLP 1198 (1370)
Q Consensus 1119 d~d~~V~leAm~~L~~iL~~l~~~~~~~~~~~i~~~lrpffede~~~vR~aAi~LfG~L~~~~~~~~~~~~~eQv~~~Lv 1198 (1370)
+.++.++..+..+|+++...-. . . +...+...+.+++..+|..|+..++.+.... ...+...+...++
T Consensus 939 ~~~~~vr~~~a~~lg~L~~~~~-~---~----~lp~L~~~l~~~~~~~r~~ai~~l~~~~~~~----~~~~~~~l~~li~ 1006 (1207)
T d1u6gc_ 939 CAEEGTRNVVAECLGKLTLIDP-E---T----LLPRLKGYLISGSSYARSSVVTAVKFTISDH----PQPIDPLLKNCIG 1006 (1207)
T ss_dssp CSSTTHHHHHHHHHHHHHHSSG-G---G----THHHHTTTSSSSCHHHHHHHHHHTGGGCCSS----CCTHHHHHHHHST
T ss_pred CCCHHHHHHHHHHHHHHHHCCH-H---H----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHH
T ss_conf 9718799999999998870278-9---9----9999999857999999999999999999866----5546789999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCHH--------HHHHHHHHHCCCCCCC---------------CCCCCHHHHHHHHH
Q ss_conf 798731589946999999999943011--------3345554310456776---------------88898589999999
Q 000655 1199 RLILHIYDDDLSVRQACRNTLKQVAPF--------MEIGVYGIFNSHCFNS---------------DHRSDYETFVRDLT 1255 (1370)
Q Consensus 1199 pLLlHL~D~~~~V~~ack~tL~~~a~l--------L~~~l~~l~~~~~~~~---------------~~~l~~~~f~~~l~ 1255 (1370)
+++-.|+|+++.|++++-.+|...+.. +.--+..++..-.... |+|++-+.-.-+..
T Consensus 1007 ~ll~~l~d~~~~vR~~al~~l~~~~~~~p~li~~~l~~llp~l~~~t~~~~e~ir~v~~gp~kh~~d~gl~~rk~a~e~~ 1086 (1207)
T d1u6gc_ 1007 DFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECM 1086 (1207)
T ss_dssp TTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCEEECCCCHHHHHHHHHHH
T ss_conf 99998679998999999999999998486989999999999999985125643034505895110588589999999999
Q ss_pred HHHHHHCCCH--HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 9999959421--99999999875209993677999999965301481355410169999999999
Q 000655 1256 RQFVQHFPSR--IDSYMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVV 1318 (1370)
Q Consensus 1256 ~~L~~~~~~~--~~~~l~~~l~y~kS~~~~IR~aAa~fiG~l~~~~~~~~~~~~~~e~l~~~L~~ 1318 (1370)
-.++....++ +..|+...+.=++.. .+||.-+...+.-++...|..-...+ +.+...|..
T Consensus 1087 ~~~l~~~~~~~~~~~~~~~~~~gl~d~-~di~~~~~~~l~~l~~~~~~~~~~~l--~~~~~~~~~ 1148 (1207)
T d1u6gc_ 1087 YTLLDSCLDRLDIFEFLNHVEDGLKDH-YDIKMLTFLMLVRLSTLCPSAVLQRL--DRLVEPLRA 1148 (1207)
T ss_dssp HHHHHSSCSSSCHHHHHHHHHHTTSSC-HHHHHHHHHHHHHHHHSCCHHHHTTT--TTTHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHH
T ss_conf 999987550258999999998535654-88999999999999986938789999--999999999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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