Citrus Sinensis ID: 000670

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360-

MTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccccccHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccc

ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHcHccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHcccccccccccccccccEEHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHccccccccccccHHHHHHHHHHHcccccccccccccccccccccHHHEHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcHHHHHHHHHHHHHHHcccHccccHHHHHHHHHHHHccccccccccccEccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHcccHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEccccc

mtslrtnvenegetgepyfRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVtfldlplwHRILVLEILRGFCVEARTLRLLFQnfdmnpkntnVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTdeavdvgelesprcdydplpkcmgeTAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTinipnesdrrsavlqspgskrseslvdqkdnivltpkNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDraihsphattqeVSTASSKlaressgqysdfnVLSSLNSQLFESSALMHISAVKSLLSALHQLSHqcmigtsssfgptssqkigsISFSVERMISILVNNlhrveplwDQVVGHFLELADNSNQHLRNIALDALDQSICAVlgsekfqdsasrqrgtsdevesrhgdlrsiecAVISPLRVLYfstqstdvrAGTLKILLHVLERCgeklhyswPSILELLRSVADASEKDLITLGFQSLRFIMNdglssiptdcihecvdvtgayssqktELNISLTAVGLLWTTTDFIAKGLVHgiseekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdrDKLLFAVFSLLKKlgaderpevRNSAIRTLFQTLGShgqklsesmwEDCLWnyvfpmldcashmaatsskdewqgkelgtrggKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVlshstkgnlpvayLNSVLDVYEYAlqkspnysdnaagKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTmithdnyeiefghvppVLRTILEIlpllspteQLCSMWLVLLREILQylprsdsplqkkedeeeppstsdnihdvhvrtkydkpngtapttpkdasalsessgsvtaaipnhlfaeKLIPVVVDLFLkapavekciiFPEIIQNLGrcmttrrdnpdssLWRLAVEGFNHILVDDVTKLAANFWQdmkisrparLRVWKEVADVYEIFLVGYcgralpsnslsAVALSGADESLEMSILDILGdkilkspidapFDVLQRLISTIDRcasrtcslpvetvelmpahcskFSLACLHKlfslsssdneasKWNLTRAEVSKISITVLMGRCEYILNRFlidendlgernfpaARLEEIIFILQELARlkihpdtasalplhpvlksglamdensdkrphllvlFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

mtslrtnvenegetgepyfrRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLfqnfdmnpkNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDeavdvgelesprcdydplPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVlqspgskrseslvdqkdnivLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHsphattqevstaSSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIgtsssfgptssQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGsekfqdsasrqrgtsdevesrhgdlrsiECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdRDKLLFAVFSLLKklgaderpevRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSrntaqkqwDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLprsdsplqkkedeeeppstsdnihdvhvrTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDmkisrparlrvWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITkelalekasmaggr

MTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKsllsalhqlshqCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISrearvrelvqvllrlITKELALEKASMAGGR

****************PYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQF*********AVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINI***************************NIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAI*****************************VL**LNSQLFESSALMHISAVKSLLSALHQLSHQCMIGT***********IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLG************************LRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGI*************************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAA***********LGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYL********************************************************TAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSS***EASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSG**********PHLLVLFPSFCELVISREARVRELVQVLLRLITKELAL*********

******************FRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVV*********************************DASNAAVLVASEAHSITLAIEGLLGVVFTVA*****************************AVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTI********************************LTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRA***************************************FESSALMHISAVKSLLSALHQLS*********************ISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSA***R*TSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAK************************************LDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASH**************LGTRGGK*************QKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHST***LPVAYLNSVLDVYEYALQKSP***************HGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTM************VPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQ*********STSDNIHDVHVRTKYDKPNGTAPTT***ASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANF****KISRPARLRVWKEVADVYEIFLVGYCGRALP***LSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCS*********PAHCSKFSLACLHKLFSL***************EVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKI***************************PHLLVLFPSFCELVISREARVRELVQVLLRLITKELA**********

**************GEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVS***********LSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESD*****************VDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH********************YSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTS*********KIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEK********************DLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPK***********LSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDS***************DNIHDVHVRTKYDKPNG******************VTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALE********

**************GEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSE**************KGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPN***********************KDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHA******************QYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGT***********IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLV**************************************HSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASH********************KAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEAS***LTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASM****

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1361	2.2.26 [Sep-21-2011]
Q9VLT1		1684	Protein MON2 homolog OS=D	yes	no	0.557	0.450	0.278	2e-84
Q29L43		1701	Protein MON2 homolog OS=D	yes	no	0.569	0.455	0.269	3e-83
Q80TL7		1715	Protein MON2 homolog OS=M	yes	no	0.562	0.446	0.280	4e-76
Q6GP04		1721	Protein MON2 homolog OS=X	N/A	no	0.567	0.448	0.280	6e-76
Q7Z3U7		1718	Protein MON2 homolog OS=H	yes	no	0.429	0.339	0.293	1e-62
Q19338		1646	Monensin-resistant homolo	yes	no	0.341	0.282	0.252	2e-37
Q61SD1		1645	Protein MON2 homolog OS=C	N/A	no	0.341	0.282	0.252	9e-36
F4IXW2		1739	Brefeldin A-inhibited gua	no	no	0.333	0.261	0.231	1e-26
Q9LZX8		1793	Brefeldin A-inhibited gua	no	no	0.387	0.293	0.198	7e-18
P48563		1636	Protein MON2 OS=Saccharom	yes	no	0.602	0.501	0.199	6e-15

>sp\|Q9VLT1\|MON2_DROME Protein MON2 homolog OS=Drosophila melanogaster GN=mon2 PE=2 SV=4	Back alignment and function desciption

 Score =  315 bits (806), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 254/911 (27%), Positives = 425/911 (46%), Gaps = 152/911 (16%)

Query: 16   EPYF--RRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFC 73
            +PYF     +LR VA +I+ Y + L+TECE+FLS+++K    D P W R L LE++    
Sbjct: 307  KPYFPISMRLLRLVAILIQKYHTILVTECEIFLSLIIKFLDPDKPAWQRALALEVIHKLV 366

Query: 74   VEARTLRLLFQNFDMNPKNTNVVEGMVKALARVV------SSVQF---QETSEESLSAVA 124
              +  +    +++D+    TN+V  M+ A+   +      +S      Q     SL+A++
Sbjct: 367  TRSSLIAFFCKSYDLKNHATNIVHDMIAAMGSYIRYSLINASAMLNGQQNGVANSLTAMS 426

Query: 125  G------MFS--------------SKAKGIEWILDNDASNAAVLVA-SEAHSITL----A 159
            G      MF               SKA  +E +   DASN       S  H+I L    +
Sbjct: 427  GSNQCGFMFRGAYLPLVATYAPGVSKAVYLEMLDKIDASNIPDSYGISVGHAILLDMTRS 486

Query: 160  IEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDAL 219
            I G++     +    + AV   E   P                LC+ +V+S W  +L A 
Sbjct: 487  IGGVIQRTPELHPSHNTAVITEEEHKP----------------LCLQLVNSSWSALLSAF 530

Query: 220  SLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCK------FTINIPNES 273
              ++  S  EA    ILK  Q +   CG+L  ++P ++F+ ++C+      + ++I   +
Sbjct: 531  IPLVETSIDEATTENILKAMQNYAALCGMLEQLQPRDAFIMAMCRASFPPHYAMSIFANT 590

Query: 274  DRRSAVLQSPGSKRSESLVDQKDN---------------------------------IVL 300
             +    L+      S+ L  Q  N                                 ++L
Sbjct: 591  TQSDGDLRCHTRSGSQDLSSQFINSCSGDAGDFRPQIVAVGTPLPSASLPHSVMQAPVML 650

Query: 301  TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARE 360
            T KN+Q +R +  +AH    +LG SW +VL+TL  L   +    +T   +  A  K A E
Sbjct: 651  TNKNLQCMRAILFLAHNNGGILGTSWHIVLQTLQHLVWILGLKPSTGGSLQ-AMPKPAVE 709

Query: 361  S-----SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPT 415
            +     +   +D  VLS + SQLFESS  +   A+  L+ AL +LSH+ M    ++  P+
Sbjct: 710  ANVGIQTAVMADLPVLSQMLSQLFESSQYLDDVALHHLIDALCKLSHEAMELAYANREPS 769

Query: 416  SSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSI 475
                     F+V +++   + N+ R++ LW  +  H LE+  + +  +R   ++A+   +
Sbjct: 770  L--------FAVAKLLETGLVNMPRIKVLWRPLTNHLLEVCQHRHIRMREWGVEAITYLV 821

Query: 476  CAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKI 535
             + L   +F+     +                ++  ++SPL  L  +    DVR   L  
Sbjct: 822  KSAL---QFKHKTPLKENME------------LQTMLLSPLSELS-TVLHADVRQRQLDC 865

Query: 536  LLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHE 595
            +L +L   GE L + WP+I+E++ +V +   + LI   FQ L+ ++ D L+ +P  C+  
Sbjct: 866  VLQILNTAGEILSFGWPAIIEIIGAVNEHHGEPLIRTAFQCLQLVITDFLTVMPWRCLPL 925

Query: 596  CVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDG 655
            C+     + SQ  ELNISLTA+GL+W  +DF  +             NQD     K M  
Sbjct: 926  CISTAAKFGSQTQELNISLTAIGLMWNISDFFNQ-------------NQD-----KLMST 967

Query: 656  EKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSH 715
            + ++   +S L D   ++ M   DKL   +++ L +L  D RP VR SA +TLF T+ +H
Sbjct: 968  QLQD---VSILPDFPGTVKMPQFDKLWMCLYAKLGELCVDLRPAVRKSAGQTLFSTISAH 1024

Query: 716  GQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTA 775
            G  L+   W+  +W  +FP+LD    +++++S +         +   + ++LIHHSRNTA
Sbjct: 1025 GSLLNPPTWQALVWQVLFPLLDNVRALSSSASNE---------KVDASGNILIHHSRNTA 1075

Query: 776  QKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAIN 835
            QKQW ET VL L G+ R+  +    L  L +F   W  +L F++N+ L+ + EVSLAA+ 
Sbjct: 1076 QKQWAETQVLTLSGVCRVFNTKRELLQMLGDFERAWSLILEFIQNAALSKNGEVSLAALK 1135

Query: 836  CLQTTVLSHST 846
             LQ  ++ H+T
Sbjct: 1136 SLQ-EIMYHNT 1145

May be required for traffic between late Golgi and early endosomes.
Drosophila melanogaster (taxid: 7227)

>sp\|Q29L43\|MON2_DROPS Protein MON2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=mon2 PE=3 SV=2	Back alignment and function description

>sp\|Q80TL7\|MON2_MOUSE Protein MON2 homolog OS=Mus musculus GN=Mon2 PE=2 SV=2	Back alignment and function description

>sp\|Q6GP04\|MON2_XENLA Protein MON2 homolog OS=Xenopus laevis GN=mon2 PE=2 SV=1	Back alignment and function description

>sp\|Q7Z3U7\|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2	Back alignment and function description

>sp\|Q19338\|MON2_CAEEL Monensin-resistant homolog 2 OS=Caenorhabditis elegans GN=mon-2 PE=3 SV=2	Back alignment and function description

>sp\|Q61SD1\|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis briggsae GN=CBG06228 PE=3 SV=1	Back alignment and function description

>sp\|F4IXW2\|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2	Back alignment and function description

>sp\|Q9LZX8\|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1	Back alignment and function description

>sp\|P48563\|MON2_YEAST Protein MON2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MON2 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1361
359487909		1628	PREDICTED: protein MON2 homolog [Vitis v	0.975	0.815	0.790	0.0
298204915		1679	unnamed protein product [Vitis vinifera]	0.969	0.786	0.787	0.0
356574904		1644	PREDICTED: protein MON2 homolog [Glycine	0.979	0.810	0.766	0.0
356535141		1643	PREDICTED: protein MON2 homolog isoform	0.972	0.805	0.766	0.0
255542394		1591	guanine nucleotide-exchange, putative [R	0.945	0.808	0.734	0.0
224125556		1638	predicted protein [Populus trichocarpa]	0.948	0.788	0.724	0.0
334187989		1630	armadillo/beta-catenin-like repeat-conta	0.973	0.812	0.725	0.0
334187991		1658	armadillo/beta-catenin-like repeat-conta	0.972	0.798	0.718	0.0
356535139		1589	PREDICTED: protein MON2 homolog isoform	0.944	0.808	0.724	0.0
449435760		1589	PREDICTED: LOW QUALITY PROTEIN: protein	0.945	0.809	0.707	0.0

>gi\|359487909\|ref\|XP_003633673.1\| PREDICTED: protein MON2 homolog [Vitis vinifera]	Back alignment and taxonomy information

 Score = 2138 bits (5540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1074/1359 (79%), Positives = 1183/1359 (87%), Gaps = 32/1359 (2%)

Query: 1    MTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLW 60
            MTSLRTN E EGE GEP FRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVT LDLPLW
Sbjct: 292  MTSLRTNAEVEGEAGEPSFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTSLDLPLW 351

Query: 61   HRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESL 120
            HRILVLEILRGFCVEARTLR+LFQNFDM+PKNTNVVEGMVKALARVVSS+Q QETSEESL
Sbjct: 352  HRILVLEILRGFCVEARTLRILFQNFDMHPKNTNVVEGMVKALARVVSSLQVQETSEESL 411

Query: 121  SAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDV 180
            +AVAGMFSSKAKGIEW LDNDASNAAVLVASEAH+ITLA+EGLLGVVFTVATLTDEAVDV
Sbjct: 412  TAVAGMFSSKAKGIEWSLDNDASNAAVLVASEAHAITLAVEGLLGVVFTVATLTDEAVDV 471

Query: 181  GELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQ 240
            GELESPRCD DP  KC G+TAVLCISMVDSLWLTILDALSLILSRSQGEAI+LEILKGYQ
Sbjct: 472  GELESPRCDSDPPAKCTGKTAVLCISMVDSLWLTILDALSLILSRSQGEAIVLEILKGYQ 531

Query: 241  AFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVL 300
            AFTQACGVL A+EPLNSFLASLCKFTINIP+E +RRS  LQSPGS+RSE LVDQ+D+IVL
Sbjct: 532  AFTQACGVLRAIEPLNSFLASLCKFTINIPSEVERRSNALQSPGSRRSEPLVDQRDSIVL 591

Query: 301  TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARE 360
            TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHA TQEVS    KL RE
Sbjct: 592  TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHAATQEVSATVPKLTRE 651

Query: 361  SSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKI 420
            SSGQYSD +VLSSLNSQLFESSALMHISAVKSLL AL +LSHQC+ GTSS FG  S+QK+
Sbjct: 652  SSGQYSDLSVLSSLNSQLFESSALMHISAVKSLLCALCELSHQCIPGTSSVFGQASNQKV 711

Query: 421  GSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLG 480
            GSISFSVERMISILVNNLHRVEPLWDQVV +FLEL ++SNQHLRN+ALDALDQSICAVLG
Sbjct: 712  GSISFSVERMISILVNNLHRVEPLWDQVVTYFLELTNSSNQHLRNMALDALDQSICAVLG 771

Query: 481  SEKFQDS-ASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHV 539
            S++FQ+   S+    S ++E+ + +LRS+ECAVISPLRVLYFS+Q TD R G LKILLHV
Sbjct: 772  SDRFQEYIPSKAHSASHDMETINSELRSLECAVISPLRVLYFSSQITDGRVGALKILLHV 831

Query: 540  LERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDV 599
            LER GEKLHYSWP ILE+LR VADASEKDL+TLGFQSLR IMNDGLS+IP DC+H C+DV
Sbjct: 832  LERHGEKLHYSWPDILEMLRCVADASEKDLVTLGFQSLRVIMNDGLSTIPADCLHVCIDV 891

Query: 600  TGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKRE 659
            TGAYS+QKTELNISLTA+GLLWTTTDFIAKGL+HG  +E E    D+ S PKQMDGE++E
Sbjct: 892  TGAYSAQKTELNISLTAIGLLWTTTDFIAKGLLHGPPKETEI--MDMSSTPKQMDGERKE 949

Query: 660  EKTLS---NLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHG 716
            EKTL+     DDQ+  +  V+RD+LLF+VFSLL+KLGADERPEVRNSAIRTLFQTLG HG
Sbjct: 950  EKTLNFADKFDDQSPLMNSVNRDRLLFSVFSLLQKLGADERPEVRNSAIRTLFQTLGGHG 1009

Query: 717  QKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQ 776
            QKLS+SMWEDCLWNYVFP+LD ASHMA TSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQ
Sbjct: 1010 QKLSKSMWEDCLWNYVFPILDRASHMAETSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQ 1069

Query: 777  KQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINC 836
            KQWDETLVLVLGGIARLLRSFFPFL +LSNF TGWESLL FVKNSILNGSKEV+LAAINC
Sbjct: 1070 KQWDETLVLVLGGIARLLRSFFPFLRSLSNFSTGWESLLLFVKNSILNGSKEVALAAINC 1129

Query: 837  LQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQ 896
            LQTTV SHS+KGNLP+ YL SVLDVYE  LQKSPNYSDNAA KVKQEILHGLGELYVQAQ
Sbjct: 1130 LQTTVNSHSSKGNLPMPYLQSVLDVYETVLQKSPNYSDNAASKVKQEILHGLGELYVQAQ 1189

Query: 897  KMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMW 956
             MFDD  Y QLLAII L V+Q+ + +DN+E+E+GHVPPV R +LEILPLL P   L +MW
Sbjct: 1190 MMFDDGTYTQLLAIIRLVVKQSKMNNDNFEVEYGHVPPVQRMMLEILPLLRPAVHLPAMW 1249

Query: 957  LVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASAL 1016
            L+LLRE+LQYLPR DSP   KED E+      N                      +AS+L
Sbjct: 1250 LLLLRELLQYLPRPDSP---KEDNEDGAEMMIN--------------------KTEASSL 1286

Query: 1017 SE-SSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPD 1075
            S  S+ S+ A IP++LFAEKLIPV+VDLFL+APAVEK  IFPEI+Q L RCMTTRRD+PD
Sbjct: 1287 SAGSTTSIMAGIPSYLFAEKLIPVLVDLFLQAPAVEKYSIFPEIVQGLSRCMTTRRDSPD 1346

Query: 1076 SSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRAL 1135
             +LWR AVEGFN+I++DDV KLA NF  D  IS+PAR+RVWKEVADVYEIFLVGYCGRAL
Sbjct: 1347 GTLWRSAVEGFNNIVLDDVNKLAVNFGPDPSISKPARMRVWKEVADVYEIFLVGYCGRAL 1406

Query: 1136 PSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPV 1195
            PS SLS +AL  ADESLEM+IL+ILGDKIL++ IDAP D+LQRL+ T+D CASRTCSL +
Sbjct: 1407 PSKSLSDMALK-ADESLEMTILNILGDKILQAQIDAPVDILQRLVLTLDHCASRTCSLRI 1465

Query: 1196 ETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRF 1255
            ETVELMP+HCS+FSL CL KLFSLSS + EA+ WN TR+EVSKISI VLM RCE ILNRF
Sbjct: 1466 ETVELMPSHCSRFSLTCLQKLFSLSSYNGEANDWNSTRSEVSKISIMVLMTRCEQILNRF 1525

Query: 1256 LIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRP 1315
            LIDEN+LGER  P ARLEEIIF+L+ELARL IHP+TAS LPLHP LK GLA +EN D+RP
Sbjct: 1526 LIDENELGERPLPTARLEEIIFVLKELARLVIHPETASVLPLHPYLKGGLA-EENHDRRP 1584

Query: 1316 HLLVLFPSFCELVISREARVRELVQVLLRLITKELALEK 1354
            HLLVLF SFCELVISREARVRELVQVLLRLI  EL+L+K
Sbjct: 1585 HLLVLFASFCELVISREARVRELVQVLLRLIAAELSLQK 1623

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|298204915\|emb\|CBI34222.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356574904\|ref\|XP_003555583.1\| PREDICTED: protein MON2 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|356535141\|ref\|XP_003536107.1\| PREDICTED: protein MON2 homolog isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|255542394\|ref\|XP_002512260.1\| guanine nucleotide-exchange, putative [Ricinus communis] gi\|223548221\|gb\|EEF49712.1\| guanine nucleotide-exchange, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224125556\|ref\|XP_002319615.1\| predicted protein [Populus trichocarpa] gi\|222857991\|gb\|EEE95538.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|334187989\|ref\|NP_198149.2\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006370\|gb\|AED93753.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187991\|ref\|NP_001190414.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006371\|gb\|AED93754.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356535139\|ref\|XP_003536106.1\| PREDICTED: protein MON2 homolog isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|449435760\|ref\|XP_004135662.1\| PREDICTED: LOW QUALITY PROTEIN: protein MON2 homolog [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1361
UNIPROTKB\|Q0JIX0		1267	Os01g0772700 "Os01g0772700 pro	0.441	0.474	0.566	4.6e-294
DICTYBASE\|DDB_G0271398		1874	mon2 "unknown" [Dictyostelium	0.291	0.211	0.290	2.9e-78
FB\|FBgn0031985		1684	mon2 [Drosophila melanogaster	0.127	0.103	0.375	3.6e-70
UNIPROTKB\|Q29L43		1701	mon2 "Protein MON2 homolog" [D	0.121	0.097	0.377	2.8e-69
UNIPROTKB\|Q7Z3U7		1718	MON2 "Protein MON2 homolog" [H	0.218	0.173	0.296	4.9e-61
MGI\|MGI:1914324		1715	Mon2 "MON2 homolog (yeast)" [M	0.218	0.173	0.299	9.5e-61
WB\|WBGene00008685		1646	mon-2 [Caenorhabditis elegans	0.189	0.156	0.25	4.7e-35
UNIPROTKB\|Q19338		1646	mon-2 "Monensin-resistant homo	0.189	0.156	0.25	4.7e-35
ASPGD\|ASPL0000017942		1608	AN3643 [Emericella nidulans (t	0.114	0.097	0.288	7.3e-32
UNIPROTKB\|Q5B737		1629	AN3643.2 "Putative uncharacter	0.119	0.100	0.289	2.7e-31

UNIPROTKB\|Q0JIX0 Os01g0772700 "Os01g0772700 protein" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

 Score = 1696 (602.1 bits), Expect = 4.6e-294, Sum P(6) = 4.6e-294
 Identities = 355/627 (56%), Positives = 452/627 (72%)

Query:   554 ILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNIS 613
             I +  ++V DASEKDLI+LGFQS+R IMN+GL++IP  C+ EC+ VTGAY +QKT++NIS
Sbjct:   522 IFKRKKAVTDASEKDLISLGFQSIRVIMNEGLATIPVQCLDECILVTGAYGTQKTDINIS 581

Query:   614 LTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDD--QNH 671
             LTAVGLLWT TDF+ KGL   IS+  E AN        +  G  +EE   S+  D  Q+ 
Sbjct:   582 LTAVGLLWTATDFVVKGL---ISKSAEKANG--MDEEAESGGTVKEEALSSSEKDIKQSP 636

Query:   672 SIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNY 731
                +VD +KL F+VFS+L+KLGAD+RPEVRNSA+RTLFQTL +HGQKLS++MWEDCLW Y
Sbjct:   637 LKSVVDYNKLFFSVFSVLQKLGADDRPEVRNSAVRTLFQTLSTHGQKLSKTMWEDCLWIY 696

Query:   732 VFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIA 791
             VFPML+  SH+A+TSS+DEWQGKELGTR GKAVHMLIHHSRNTAQKQWDET+VLVLGGIA
Sbjct:   697 VFPMLERVSHLASTSSRDEWQGKELGTRAGKAVHMLIHHSRNTAQKQWDETIVLVLGGIA 756

Query:   792 RLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLP 851
             RLLRSFFPFL  LS F +GW  LL FVKN ILNGSKEV+LAAINCLQT V S+ +KGNL 
Sbjct:   757 RLLRSFFPFLQQLSKFSSGWVLLLDFVKNGILNGSKEVALAAINCLQTFVGSNCSKGNLE 816

Query:   852 VAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAII 911
              +Y+ SVLD+YE  LQ SPNY +++A KVKQE+L GLG+LYVQAQ +F+D MY +L+A++
Sbjct:   817 SSYVKSVLDIYELVLQTSPNYKNDSADKVKQEVLRGLGDLYVQAQSLFNDEMYLRLMAVM 876

Query:   912 DLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSD 971
              L ++ +M   D Y+ E G +P + R ILEI+P+L PT  L SMW  LL E+L YL   D
Sbjct:   877 HLMIKSSMNPTD-YDNELGSIPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYLNSHD 935

Query:   972 SPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIP--- 1028
             +PLQK+  E         +H+     K D  NG A     + S L+ SS  +  A+    
Sbjct:   936 TPLQKQGKE---------MHE----QKSDAANG-ATHGFLERSHLNNSSTKMDNAVGCGW 981

Query:  1029 NHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNH 1088
               +F EKL+P+VV+LFL+AP  E+    PE+I+ LGRCM TRRDNP  +LWR++ E FN 
Sbjct:   982 GIMFIEKLVPIVVNLFLEAPQNERFNSSPEVIRCLGRCMNTRRDNPKGTLWRVSAECFNR 1041

Query:  1089 ILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGA 1148
             +LVD+VT  +A+    M   + +R R WKEVADVYE FLVG CGR L S+  S  +++ A
Sbjct:  1042 VLVDEVTHDSADCKSGMSSYKFSRARFWKEVADVYETFLVGSCGRVLSSDVPSVDSVT-A 1100

Query:  1149 DESLEMSILDILGDKILKSPIDAPFDV 1175
             DE+LEM++L + GD +LK   DAP ++
Sbjct:  1101 DETLEMAVLTVFGDNVLKLQKDAPVEL 1127

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

DICTYBASE\|DDB_G0271398 mon2 "unknown" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

FB\|FBgn0031985 mon2 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29L43 mon2 "Protein MON2 homolog" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z3U7 MON2 "Protein MON2 homolog" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1914324 Mon2 "MON2 homolog (yeast)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

WB\|WBGene00008685 mon-2 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|Q19338 mon-2 "Monensin-resistant homolog 2" [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000017942 AN3643 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5B737 AN3643.2 "Putative uncharacterized protein" [Aspergillus nidulans FGSC A4 (taxid:227321)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XIII.1330.1	hypothetical protein (1638 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1361
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	7e-14
pfam12783		166	pfam12783, Sec7_N, Guanine nucleotide exchange fac	2e-10
pfam09324		86	pfam09324, DUF1981, Domain of unknown function (DU	4e-05

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

 Score = 76.8 bits (189), Expect = 7e-14
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)

Query: 551  WPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIP---TDCIHECVDVTGAYSSQK 607
            W S+  +  + A    K+++ L F+ +  I+ +    I    T    +CV+   A+++ +
Sbjct: 1222 WKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSR 1281

Query: 608  TELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLD 667
               +ISL A+  L     F A  L  G          DL S  +  D E       S  D
Sbjct: 1282 FNKDISLNAIAFL----RFCATKLAEG----------DLGSSSRNKDKEAPPSSPQSGKD 1327

Query: 668  DQNHSIGMVDRDKLLFAVFSLL---KKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMW 724
             +  S    D+D  L+  F LL    +L  D RPE+R SA++ LF TL +HG   S  +W
Sbjct: 1328 GKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLW 1387

Query: 725  EDCLWNYVFPMLDCASHMAATSSKDEWQGKELG 757
            E    + +FP+ D   H    S  DE +G+ + 
Sbjct: 1388 ERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVD 1420

Length = 1780

>gnl\|CDD\|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>gnl\|CDD\|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981)	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1361
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	100.0
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	100.0
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	100.0
KOG0928		1386	consensus Pattern-formation protein/guanine nucleo	100.0
PF09324		86	DUF1981: Domain of unknown function (DUF1981); Int	99.51
KOG1846		1777	consensus Uncharacterized conserved protein, conta	99.44
PF12783		168	Sec7_N: Guanine nucleotide exchange factor in Golg	99.34
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	98.94
COG5307		1024	SEC7 domain proteins [General function prediction	98.89
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	98.79
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	93.01
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	91.05
KOG1062		866	consensus Vesicle coat complex AP-1, gamma subunit	80.74
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	80.66

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=6.4e-117  Score=1081.19  Aligned_cols=1229  Identities=30%  Similarity=0.363  Sum_probs=935.9

Q ss_pred             ccccccCCCCCCCCchh--HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcCCCcchHHHHHHHHHhhhccChHHHHH
Q 000670            4 LRTNVENEGETGEPYFR--RLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRL   81 (1361)
Q Consensus         4 ~~~~~~~~~~~~~p~F~--~~~~Ri~~~ll~~~~~~L~~E~Ei~LslLi~~ld~d~p~W~RvL~LEv~r~l~~d~~llr~   81 (1361)
                      ++.|--+-+-.++.+||  .++.|.+.+.+..|.+.+..+|+||++.+.++-+.|.+.|+|.+.+|+.|+++.+++.++.
T Consensus       314 lisn~~ll~~~~~~s~~~~kdlv~~l~~~v~l~~~~i~v~~~v~la~~lk~~s~~~~~~p~~l~~~~~~siv~k~dsi~~  393 (1610)
T KOG1848|consen  314 LISNTNLLFDPESLSYPCSKDLVWKLAVSVLLYVLSIGVPVAVFLASLLKFDSMDLELWPRFLDFLFLKSIVPKNDSIQI  393 (1610)
T ss_pred             HHHhcccccchhhccccccHHHHhHHhHHHheeecccCcchhhhHHHHhhhhhcCcccCccHhHHHhhccCCCCchhhHH
Confidence            44455556678888888  6799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCcchHHHHHHHHHHHHhhhccc-------cchhhhhhhccc-cccccccceEeeeccccccccccccchh
Q 000670           82 LFQNFDMNPKNTNVVEGMVKALARVVSSVQFQ-------ETSEESLSAVAG-MFSSKAKGIEWILDNDASNAAVLVASEA  153 (1361)
Q Consensus        82 i~~~YD~~~~~k~I~~~l~~~l~~~~~~~~~~-------~~~~~s~~~~~g-~~~sk~~gi~~sl~~d~~~~~~~~~~~~  153 (1361)
                      +++++|++++.+|+|...+..+.+++....+.       +...++.+.++| .+.+|..||+|-.+.|+.....++--+.
T Consensus       394 ~trn~diktk~thlldk~~~plan~vy~~lv~ti~nsi~e~l~k~s~esg~~eFt~k~k~Ie~~~dnds~stavl~~l~~  473 (1610)
T KOG1848|consen  394 FTRNFDIKTKVTHLLDKEILPLANFVYKELVGTISNSIQEMLNKSSIESGGSEFTSKEKGIELREDNDSMSTAVLLQLSF  473 (1610)
T ss_pred             HHhhcccCcchHHHHhhcccccchhHHHHHHHhhhHHHHHHHHHhHHhhcCccchhhhcCceeeccCchHHHHHHHHHHh
Confidence            99999999999999999999999999865322       233334445566 7788889999876655543333322233


Q ss_pred             hhHHHHHHHHHHHHHHHhcccccccccCCCCCCCCCCCCCCCccc-chhHHHHHHHHHhhHHHHHHHHhhhhccCCHHHH
Q 000670          154 HSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMG-ETAVLCISMVDSLWLTILDALSLILSRSQGEAII  232 (1361)
Q Consensus       154 ~~i~~~~e~L~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~m~~~~W~~lLaalS~~L~~s~De~~~  232 (1361)
                      -.+.++.||+.++.++|+.+...+.+.+....+.....+.....+ ...++...|+.+.|..++++++-.+..+.|+.+.
T Consensus       474 ~~~~li~e~~~ss~~avSt~~~~a~~v~~l~~~~~~~s~k~~l~~~~kLe~i~~a~~snq~tildalks~l~~st~e~is  553 (1610)
T KOG1848|consen  474 SNKVLIPEGLYSSRMAVSTLLKRAQDVLHLYIEDEVLSNKCPLPRQTKLEIIFDAVLSNQSTILDALKSTLPESTDEIIS  553 (1610)
T ss_pred             hhhhhccccchhhhHHHHHHHHHHHHHHHHhhhhhhhccCCccccceeehhHHHHHhhccccHHHHhhhhccccccchhh
Confidence            334455566666666666655444333322222211111111112 2455667789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHhcCCCCCcccccc-cccCCCCCc---cc-------------------
Q 000670          233 LEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSA-VLQSPGSKR---SE-------------------  289 (1361)
Q Consensus       233 ~~lL~gfq~~a~vag~L~L~~~rDafl~sL~k~t~~~~~~~~~~~~-~~~~pgs~~---~~-------------------  289 (1361)
                      +.++.+++.++..||+.+-+++..+++..||++....+........ +.++|..++   ++                   
T Consensus       554 ~qvl~s~stltsa~~~~~Ade~lna~~~~l~~~~~~s~r~vs~lr~l~s~Spv~gr~~~sew~~dfetw~~~t~~~~~~p  633 (1610)
T KOG1848|consen  554 AQVLASYSTLTSACGRCSADEVLNALKEALVPFKDFSPRPVSRLRCLNSESPVVGRKMGSEWKIDFETWDKATIILNRSP  633 (1610)
T ss_pred             HHHHhchHHHHhccccccchhHHHHHHHhhCCcccCCccHHHHHhhccccCccccccCCcceEEEEeeccceeeEecCCC
Confidence            9999999999999999999999999999999999754322111000 001111110   00                   


Q ss_pred             ----ccccccCCcCCChhHHHHHHHHHHHHHhhcCcccCCHHHHHHHHHHhHHhhcC-CCCCccccccccccccccc---
Q 000670          290 ----SLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHS-PHATTQEVSTASSKLARES---  361 (1361)
Q Consensus       290 ----~~~~~~~~~~l~~Kni~~lraLlnla~~lG~~L~~SW~~IL~tlq~ld~~~~~-p~~~~~~~~~~~p~~~~~~---  361 (1361)
                          +.+-+..++.++.||+++.|+++++++.+-+.++.+|..++.|...+|+..+. |..+.+.+.+..+.-+.+.   
T Consensus       634 ~~~~~s~ss~~~v~lT~snvqa~rsf~t~~~~~~~sy~~sw~llm~t~~~ls~~~~m~p~qt~l~v~t~~~~hp~~p~~~  713 (1610)
T KOG1848|consen  634 TSKHLSTSSLNRVNLTNSNVQASRSFSTLMDYELVSYKNSWSLLMYTTSSLSQPAYMEPLQTLLAVITSSSVHPIQPLTA  713 (1610)
T ss_pred             CCccccccCCCccccccchHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcchhhcCHHHhhHHHHhcCCCCCCCcchh
Confidence                01112366889999999999999999999999999999999999999998765 5554443333222222211   


Q ss_pred             -cCccchhhHHHHHHHhHhhhccCCChHHHHHHHHHHHHhhHHhhcCCCCCCCCCCCCCCCCeeeeHHHHHHHHHhhccc
Q 000670          362 -SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHR  440 (1361)
Q Consensus       362 -~~~~~dl~il~~i~~~LFesS~~L~~~a~~~fv~ALc~lS~e~l~~~~~~~~~~~~~~~~~~~F~L~kL~eva~~N~~R  440 (1361)
                       ..+++|..+++++.+++|++++.++..++..+++||..++.+.+....                       ++..|..|
T Consensus       714 ~~~~ynd~~~lssl~~~v~~~~a~~~~ss~~slL~ali~ls~~sli~~~-----------------------~~~~sslr  770 (1610)
T KOG1848|consen  714 PRQSYNDDLLLSSLKNSVYKTSANRSISSGISLLRALIELSYSSLILET-----------------------VCSCSSLR  770 (1610)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHh-----------------------hccccccc
Confidence             134678889999999999999999999999999999999988764432                       12334568


Q ss_pred             chhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcchhccccccccCCCchhhhhhhhhhhHHHHHHhccHHHHh
Q 000670          441 VEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLY  520 (1361)
Q Consensus       441 ~~~iW~~l~~hli~v~~~~n~~lr~~Avd~L~~li~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~lq~~ll~pl~~L~  520 (1361)
                      ....|..+..|+.....++|+..+..|++.|++.+...+++..+...+.+......++..+...+..-+.+++..+...+
T Consensus       771 ~~~~~l~v~~~~~~l~e~snq~~~~naa~~l~t~~n~vl~s~~~~~asals~da~~dv~sk~ti~~es~~~~l~sl~v~~  850 (1610)
T KOG1848|consen  771 FLDSKLDVSGWSLILKELSNQFKIINAAPELRTRANNVLASILVDVASALSNDASPDVYSKQTIFFESLGMLLPSLEVSD  850 (1610)
T ss_pred             cccchhhhhHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhcccccchhccceeeHhhhHHHHHHHHHHH
Confidence            88888888888888888888888888888888888888877766543444433333333222233333446666666667


Q ss_pred             ccCCcHHHHHHHHHHHHHHHHhcCCCccCChHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHhccCCCCChhhHHHHH
Q 000670          521 FSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADA---SEKDLITLGFQSLRFIMNDGLSSIPTDCIHECV  597 (1361)
Q Consensus       521 ~~~~~~eIr~~iL~~L~~iL~~~g~~L~sgW~~If~IL~~v~~~---~~~~lv~~aF~~LqlI~~dfL~~Lp~~~~~~lI  597 (1361)
                      ..++.+|+|...+++|.+|+|+.|+.+-+||..||++|+++++.   +++++|+.||+||++|++|||++||.+|+..||
T Consensus       851 ~s~~~~evr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~~li  930 (1610)
T KOG1848|consen  851 NSSRGVEVRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCILDLI  930 (1610)
T ss_pred             hcCccceeeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHHHHH
Confidence            78899999999999999999999999999999999999998763   588999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcchhHHHHHHHHHHHHHHHcccCCCchhhhhhhhcccCCCccccCcchhhhhhccccccccCCCCcch
Q 000670          598 DVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVD  677 (1361)
Q Consensus       598 ~tL~~F~~q~~dlNISLtAi~llW~isD~L~~~~~~~~~~~k~~~~~~~~s~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  677 (1361)
                      |++..|++|++|+||||||||+||+++||+++++.  +..++.+..+            ..|...+.      .+.+-..
T Consensus       931 dtl~~fs~QktdlNISltAi~lfWtvsDfl~~km~--S~sed~~~~~------------~~e~~~ss------~~~~~~l  990 (1610)
T KOG1848|consen  931 DTLLVFSRQKTDLNISLTAIGLFWTVSDFLKNKMF--STSEDSCAYN------------SVEDLYSS------MKSKEIL  990 (1610)
T ss_pred             HHHHHHHhhhccccccHHHHHHHHHHHHHHHhhhh--ccchhhhhhc------------chhhhccc------ccchhhh
Confidence            99999999999999999999999999999998422  1111111000            01111111      1122245


Q ss_pred             hhhhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhHHhHHHhhhhhhccCCcccccccccC
Q 000670          678 RDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELG  757 (1361)
Q Consensus       678 ~~~LW~~LL~~L~~L~~D~R~EVRn~AiqTLfril~s~g~~Ls~~~W~~~~~~VLFPLL~~l~~~~~~~s~~~~~~~~~~  757 (1361)
                      ++.+|+.||.+|.++|.|+|+||||||+||||||+++||+.|++.+|+.|+|+|++|||+......    .++|+|+++ 
T Consensus       991 ~e~lwi~ll~~L~~~~~dsr~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q~----~~ewngkei- 1065 (1610)
T KOG1848|consen  991 PEVLWIMLLVHLADLCEDSRAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQN----VSEWNGKEI- 1065 (1610)
T ss_pred             hhHHHHHHHHHHHHHhccchHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhccccccc----hhhhcchhH-
Confidence            789999999999999999999999999999999999999999999999999999999999886432    367877653 


Q ss_pred             CCCCccchhhcccccchhhhhHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 000670          758 TRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCL  837 (1361)
Q Consensus       758 ~~~~~~~~~~ihhsr~~~~k~W~ET~vlaL~gl~~lf~~~~~~L~~~~~F~~~W~~lL~~l~~~~~~~~~els~a~~~sL  837 (1361)
                                        ||||.||.+++++|++|+|..||..|..+++|.+.|+.+|+|+.+++...+++++.++++||
T Consensus      1066 ------------------qkqwtet~~ltisgIaklf~e~fk~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~ 1127 (1610)
T KOG1848|consen 1066 ------------------QKQWTETSCLTISGIAKLFSENFKLLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKAL 1127 (1610)
T ss_pred             ------------------hhhhhhhhhhhHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHH
Confidence                              59999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCChh---HHHHHHHHHHHhhcCCCCCCCCCCccchHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHH
Q 000670          838 QTTVLSHSTKGNLPVA---YLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYV--QAQKMFDDRMYGQLLAIID  912 (1361)
Q Consensus       838 ~~lL~~~~~~~~~~~~---~~~~~~~~w~~i~~~~~~~~~~~~~~~~qe~l~~f~~ly~--~~~~~~~~~~~~~~l~il~  912 (1361)
                      |+++......++++..   ....++..|+.+++.++.+..++.+++.||.+++|+..|+  .+++.+..+.++..+..++
T Consensus      1128 qell~sii~~~~ln~~~~~k~n~vf~~y~~~~~~~ssas~~t~~kv~~eiltgl~~~vqs~sk~d~~~~e~~~~slll~~ 1207 (1610)
T KOG1848|consen 1128 QELLFSIIEFGKLNATFTLKINLVFINYGRFCEVSSSASERTLAKVSQEILTGLIESVQSLSKADNFGIEEIKDSLLLVR 1207 (1610)
T ss_pred             HHHHHHHhhhccccchHHHHhhhhhhhHhhhcccccccchhHHHHHHHHHHhhhHHHHHHHHhhcchhHHHHHHHHHHhh
Confidence            9999999988887765   6677788898888877766666678999999999999988  5667888999999999999


Q ss_pred             HHHHcccCCCCCCccccCCCCHHHHHHHHhccccCCCcccchhHHHHHHHHHhhcCCCCCCC--CccCCCCCCCCCCCcc
Q 000670          913 LAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPL--QKKEDEEEPPSTSDNI  990 (1361)
Q Consensus       913 ~~~~~p~~~~~~~~~d~~~~s~lQ~~vl~~l~~i~~~~~~~~~~~~~~~~l~~f~~~~~~~~--~~~~~~~~~~~t~~~~  990 (1361)
                      .++.||.++.  +..|.++ +|+|.+|++.++.+-+++ ...+|..+++.-.-+.+.++.-.  ++.. .++. |-.+..
T Consensus      1208 kai~yp~~~~--ft~d~hv-psvq~avls~ld~l~~~~-~~~~~lvLl~~sthltpafdt~l~~~k~~-~~g~-~~~e~~ 1281 (1610)
T KOG1848|consen 1208 KAIFYPESTS--FTLDVHV-PSVQLAVLSLLDLLISDK-FKLNHLVLLLWSTHLTPAFDTRLKITKKL-GPGL-PKEEKT 1281 (1610)
T ss_pred             hccccCCCch--hhhhccC-ChHHHHHHhhcchhccCc-cccchhHHHHHhhhhhhhhhhhhhhhhcc-CCCC-chhhhc
Confidence            9999998877  8888877 889999999999998844 45565666666555665555311  1111 0000 000000


Q ss_pred             cccccccccCCCCCCCCCCcchhhhhhhccCCccccchhHHHHhhhHHHHHHHhhhcchhhhhhhhHHHHHhhccccccc
Q 000670          991 HDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTR 1070 (1361)
Q Consensus       991 ~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~p~~~~~~~~~~ii~~l~~~~~~k 1070 (1361)
                      .++...+               |         ..-...+.-++++.++-....+++.+.+.++--+++...-+.+++-+.
T Consensus      1282 ~das~et---------------l---------~~~s~~t~rna~nkv~~~g~~~l~a~a~~~i~~f~ev~~rlkr~~~t~ 1337 (1610)
T KOG1848|consen 1282 IDASLET---------------L---------ICLSKKTFRNAENKVENHGLDFLNAGAMQHIFEFLEVPMRLKRRCPTA 1337 (1610)
T ss_pred             ccchhhh---------------h---------HHhhHHHhhhchhhhchhhHHHHhhhHHHHHHhhHHHHHHHHHHcccc
Confidence            0000000               0         000112333777777777666777666655554444444444333333


Q ss_pred             -CCCCCCccHHHHHHHHHHHHHHhHHHHhhhcccc-----ccCChHHHHHhHHHHHHHhhhhhccCCC-C--CCCCCCCC
Q 000670         1071 -RDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQD-----MKISRPARLRVWKEVADVYEIFLVGYCG-R--ALPSNSLS 1141 (1361)
Q Consensus      1071 -y~~~~~~lWk~At~~~l~il~~~l~~~~~~~~~~-----~~~~~~~~~~~W~~vvd~~~~~l~~~~~-~--~~~~~~~~ 1141 (1361)
                       +.+|+.|+|++|..+|++..-.+...........     +.+...+...+|++.-|+.++++.++|+ +  +..+..++
T Consensus      1338 ~r~npe~piwvlas~cF~~l~~~~fk~l~~~~~~~laet~l~lflt~~it~~rinpevd~~~~~~~cd~e~~~~ksl~l~ 1417 (1610)
T KOG1848|consen 1338 SRVNPELPIWVLASKCFVRLMINCFKDLKGSDAIELAETMLCLFLTVEITNSRINPEVDYEYVWSLCDFENSSLKSLHLL 1417 (1610)
T ss_pred             cccCCCCceeeeeHhhHHhhHHHHHHHhccccccchhhhhhheeeEEEeeeeeeCcchhhhhhhhhcccccchhhhhhhc
Confidence             6667899999999999999988876654431100     0122234456788888889999988887 3  23344556


Q ss_pred             hhhccccchhhhhHHHHHhhhcccCCCCCCChHHHHhhHHHhhhcccCCCCCCccccccCccc--hhhhHHHHHHHHHhh
Q 000670         1142 AVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAH--CSKFSLACLHKLFSL 1219 (1361)
Q Consensus      1142 ~~~~~~~dE~~di~~~~~l~~~i~~~~~~~p~~~~~~l~~l~~~~~~r~~~~~~~t~~~~~~~--r~r~s~~c~d~Lf~l 1219 (1361)
                      +...+ .+|.+++++++.++++++.+..|.|.+..+|+.+++++++.| ++.++.+.+..|++  |-|.+|.||+.||+.
T Consensus      1418 a~~~l-~ne~led~~i~~~~d~~l~~~~d~prn~l~rlistl~r~sqk-~ss~~fs~~~~~~hn~Rf~la~~Cf~~ll~d 1495 (1610)
T KOG1848|consen 1418 AKPHL-QNECLEDEVIQYYIDLCLGSFYDQPRNTLDRLISTLNRDSQK-ASSNFFSSTESPVHNRRFRLAVDCFSILLDD 1495 (1610)
T ss_pred             cchhh-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHh-hhccCccccccCccChhHHHHHHHHHHHHHh
Confidence            66778 899999999999999999999999999999999999999988 66666665555554  555677799999987


Q ss_pred             hcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCChhHHHHHHHHHHHHHhcccCcccccCCCCCc
Q 000670         1220 SSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHP 1299 (1361)
Q Consensus      1220 ~s~~~~~~~~~~~~~~la~~a~p~Ll~Rc~~~L~~yi~D~~lrG~~P~Pr~r~~El~~vL~~l~~L~~~~~~~~~~~~~~ 1299 (1361)
                      +..     ..+..|..++++++|+|+.||+.+|+||++||...|+.|+|+.|..||+++|++|..|....      +..|
T Consensus      1496 s~s-----~~~ntr~~vsk~~~p~L~aRc~~~Lsry~~Des~~G~lplpksr~~Eiit~lq~l~~l~~~L------~~np 1564 (1610)
T KOG1848|consen 1496 SNS-----SYENTREKVSKTIRPILQARCCWSLSRYVADESVSGYLPLPKSREMEIITVLQCLNNLPSLL------YSNP 1564 (1610)
T ss_pred             cch-----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCchHHHHHHHHHHHHHHHHhhcc------ccCc
Confidence            753     12348999999999999999999999999999999999999999999999999999999883      1222


Q ss_pred             ccccccccCcCCCcccchhhhhhchhhheecchhHHHHHHHHH--HHHHhh
Q 000670         1300 VLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVL--LRLITK 1348 (1361)
Q Consensus      1300 ~~~~~~~~~~~~~~~~hL~~lyP~l~~~~~~~~~~v~~ll~~~--l~~vg~ 1348 (1361)
                      .+       .+..++.||..|+|.+|+.++++.+++....|.+  .+.+.+
T Consensus      1565 ~l-------~n~~~~~hl~~lsPs~~~~~p~~h~~~~l~~qvL~~i~~~~t 1608 (1610)
T KOG1848|consen 1565 IL-------YNLRKAYHLTNLSPSATSLNPAIHGQLTLKNQVLNAILGFTT 1608 (1610)
T ss_pred             hh-------hhHHHHHHHHhccHHHHhhhhhhhcccHHHHHHHHHHHhhhc
Confidence            21       1267899999999999999988877766555543  444443

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins	Back alignment and domain information

>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG5307 SEC7 domain proteins [General function prediction only]	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1361
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 76.0 bits (186), Expect = 7e-14
 Identities = 104/757 (13%), Positives = 208/757 (27%), Gaps = 278/757 (36%)

Query: 248 VLHAVEPLNSFLASL-CKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQ 306
           +L   E   +F+ +  CK         D   ++L            ++ D+I+++   V 
Sbjct: 21  ILSVFED--AFVDNFDCKDV------QDMPKSILSK----------EEIDHIIMSKDAVS 62

Query: 307 ALRTLF--------NIAHR-LHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKL 357
               LF         +  + +  VL  ++  ++  +    R    P   T+       +L
Sbjct: 63  GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTRMYIEQRDRL 119

Query: 358 ARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQC------MIGTSSS 411
             ++   ++ +NV                +     L  AL +L          ++G    
Sbjct: 120 YNDNQ-VFAKYNVSR--------------LQPYLKLRQALLELRPAKNVLIDGVLG---- 160

Query: 412 FGPTS-------SQKIGS--------ISF----SVERMISILVNNLHRVEPLWDQVVGHF 452
            G T        S K+          ++     S E ++ +L   L++++P W     H 
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 453 LELADNSN-------------QH------LRNI----ALDALDQSICAVLGSEKFQDSAS 489
             +    +              +      L N+    A +A + S C +L         +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-CKIL-------LTT 272

Query: 490 RQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAG-----TLKILLHVLERCG 544
           R +  +D + +      S++                              +LL  L+   
Sbjct: 273 RFKQVTDFLSAATTTHISLD-----------------HHSMTLTPDEVKSLLLKYLDCRP 315

Query: 545 EKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYS 604
           + L     +      S+   S +D +   + + + +  D L++I    I   ++V     
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTI----IESSLNVLEPAE 370

Query: 605 SQK--TEL-------NISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDG 655
            +K    L       +I    + L+W             I  +       L         
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWF----------DVIKSDVMVVVNKLHK------- 413

Query: 656 EKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSH 715
                 +L     +  +I +            L  KL  +    +  S +          
Sbjct: 414 -----YSLVEKQPKESTISIPSIY------LELKVKL--ENEYALHRSIVDHYNIPKTFD 460

Query: 716 GQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTA 775
              L    + D    Y +      SH+                          HH +N  
Sbjct: 461 SDDLIPP-YLD---QYFY------SHIG-------------------------HHLKNIE 485

Query: 776 QKQWDETLVLVLGGIARLLRSFFP--FLANLSNFWTGWESLLHFVKNSILNGSKEVSLAA 833
             +                 + F   FL    +F         F++  I +         
Sbjct: 486 HPE---------------RMTLFRMVFL----DF--------RFLEQKIRHD-------- 510

Query: 834 INCLQTTVLSHSTKGNLPVAYLNSVLDV--YE-YALQKSPNYSDNAAGKVK--QEILHGL 888
                      ST  N   + LN++  +  Y+ Y     P Y       V    + L  +
Sbjct: 511 -----------STAWNASGSILNTLQQLKFYKPYICDNDPKYE----RLVNAILDFLPKI 555

Query: 889 GE-LY-------VQAQKMFDDRMYGQLLAIIDLAVRQ 917
            E L        ++   M +D       AI + A +Q
Sbjct: 556 EENLICSKYTDLLRIALMAEDE------AIFEEAHKQ 586

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1361
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	97.34
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	97.25
d1b3ua_		588	Constant regulatory domain of protein phosphatase	96.31
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	95.68
d1b3ua_		588	Constant regulatory domain of protein phosphatase	94.76
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	90.02
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	80.65

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.0034  Score=34.46  Aligned_cols=232  Identities=14%  Similarity=0.130  Sum_probs=105.6

Q ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHCCHH
Q ss_conf             31139999999999861899779999999999999998401000030000279961232000114688999---721099
Q 000670          441 VEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECA---VISPLR  517 (1361)
Q Consensus       441 ~~~iW~~i~~hli~v~~~~n~~lR~~Avd~L~~li~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~lq~~---ll~pl~  517 (1361)
                      ....++.+...++....+++..+|..+..++..++...-......    .... ..+  ........++..   +...+.
T Consensus       365 l~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~~~~~~~----~~~~-~~~--~~~~~~~~l~~~~~~i~~~l~  437 (1207)
T d1u6gc_         365 LPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWL----CDPD-AME--QGETPLTMLQSQVPNIVKALH  437 (1207)
T ss_dssp             HHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC-------------------CCCHHHHHHHHTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH----HCHH-HHH--HHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999998459854899999999999997303212555----1548-887--630269999987699999999


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC-C-HHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             985038737899999999999997049875678289999997722036-3-46799999999999940399888314999
Q 000670          518 VLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADAS-E-KDLITLGFQSLRFIMNDGLSSIPTDCIHE  595 (1361)
Q Consensus       518 ~L~~~~~~~eIr~~iL~~L~~iL~~~g~~L~sGW~~If~IL~~v~~~~-~-~~lv~~aF~~LqlI~sDfL~~Lp~~~~~~  595 (1361)
                      .. ....+..+|...+.++.++....+..+..-...++..+.....+. . ..+-..+..++..++..+-...-...+..
T Consensus       438 ~~-l~~~~~~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~  516 (1207)
T d1u6gc_         438 KQ-MKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQA  516 (1207)
T ss_dssp             HH-TTCSCHHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTT
T ss_pred             HH-HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             98-64886567888999999999972257777667567899999760264168889999999999872267889999876


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999997706887441587999999979998704578951466532103678864567502344210344445677772
Q 000670          596 CVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGM  675 (1361)
Q Consensus       596 lIdtL~~F~~Q~~dlNISLtAi~llW~isD~L~~~~~~~~~~~k~~~~~~~~s~~~~~~~~~~e~~~~~~~~~~~~~~~~  675 (1361)
                      ++..+..-... ....+...|+..+..+...+..... .                                    ..   
T Consensus       517 l~~~~~~~~~~-~~~~i~~~al~~~~~l~~~l~~~~~-~------------------------------------~~---  555 (1207)
T d1u6gc_         517 LVPPVVACVGD-PFYKITSEALLVTQQLVKVIRPLDQ-P------------------------------------SS---  555 (1207)
T ss_dssp             THHHHHHHHTC-SSHHHHHHHHHHHHHHHHHHCCSSS-C------------------------------------CC---
T ss_pred             HHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCC-C------------------------------------HH---
T ss_conf             33468888712-3088999999999988987500011-0------------------------------------25---


Q ss_pred             CHHHHHHHHHHHHHHH-H-CCCCCHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf             1124339999999976-2-04897899999999999999860499998
Q 000670          676 VDRDKLLFAVFSLLKK-L-GADERPEVRNSAIRTLFQTLGSHGQKLSE  721 (1361)
Q Consensus       676 ~~~~~LW~~LL~~L~~-L-~~D~R~EVRn~AiqTLfril~s~G~~ls~  721 (1361)
                      .+.......++..+.. + ..|...|+|..|+..+-.++...|..+.+
T Consensus       556 ~~~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~~~~~~~~~  603 (1207)
T d1u6gc_         556 FDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGS  603 (1207)
T ss_dssp             CCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTGGGCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             544788999999999998731310178898999999898876556588

PyMOL of d1u6gc_

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure