Citrus Sinensis ID: 000759

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------130
MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRAETFTEREEDNSKEARYLVEEPLEKRESVASAGKSAESQPDASVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEESASAVGSMSASTTGAKDVTGDDLLDGKSLKIKSADPMVKTVPVEGDLRTEKDDDEADSWEPETELETEESSKDAPESTSALMSDGPASLRSLSGKSDDGGSSVGSLSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYIPTVGRVPDSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNANHSVHDSGERRYSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSGERRYSSLHIPSEDSSERRYSGLGIPSEDSGERRYSSLRTAPSSDSWNYQPATVHGCDLAHLSRMARDRNSDFLNGQRESPAPKSPSLGPTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQSERSYFDVSSSGPADSVSIPSSSAKKYHSLPDISGLSVPLREQFMSNKGARVDGSIAYKPSIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFGVVDKSKSSAISQEATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVNF
ccccccccccccHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEEEccccccccEEEEccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHcccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHccccEEcccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHcccccccccHHHHHHHHHccccc
cccccccccccccHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHEEccccEEEHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHcccccccccccccccEEEEEccccEEEcccHHHHHHHHHHHHHHHHccccccHHHHHcHEEHHccEcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEEEcccccEEEEEEcccccccccccccccccccccccccHHHccccccccccccccccccEEccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccHHEEEccccccHHHHHcHHHHHHHccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccEcccccccccccHHcccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccHcccHHHHHcccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccccccccccHcHcccEEEEccccccccEEEEEEEEEHHHHHHHHHHHHHHHccccHHHcHHHEEHHHcEccc
mdaelansnyqsgvlyrlvPAVLPVLLISigyvdpgkwaVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAilfpffagqlFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVlisqpeiplsvngmltkfsgdSAFSIMSLLGasmmphnfylhssivrrhqgqvniskgalchdHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSfcsnnnyhllhthPMISIRIVEMqvfrspvvPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFlrldipgwlhhATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIfgnsdwvgnlrwnsggtvalPFAVFLITTFTSLCLMLWLattplrsassrnnapdwsweFQRAETFTEREEDNSKEARYLVEEPLEKRESVASagksaesqpdasvtnfdldlpetiMESDQEIRLAAIEenhpniafpspticfqeesasavgsmsasttgakdvtgddlldgkslkiksadpmvktvpvegdlrtekdddeadswepeteleteesskdapestsalmsdgpaslrslsgksddggssvgSLSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLvlgvdskpaslkidtsakefsgyiptvgrvpdsllnsslydspkhrvqnsmdssygvqrgssslWSNQMQLLDAYAQnanhsvhdsgerrysslripseasgerrysslripsedsgerrysslrfpledsgerrysslhipsedsserrysglgipsedsgerrysslrtapssdswnyqpatvhgcdlahlsrmardrnsdflngqrespapkspslgptnyMDSVAFALGQklqngrstvqasgfqqnLAVSrnaqlqsersyfdvsssgpadsvsipsssakkyhslpdisglsvplreqfmsnkgarvdgsiaykpsigrpsyepslysnpgsragttlafdelspskiyrdtfpmqlssgldtgslwsrqpfeqfgvvdkskssaiSQEATSIADAEAKLLQSFRVCVVKILQLEgsewlfrhndgadedLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLgstlkndeaSFTNFmvssvphcgdgciwKVDLILSFGVWCIHRILNLslmesrpelwGKYTYVLNRLQVNF
MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLrsassrnnapdwsWEFQRAEtftereednskearylveepleKRESVAsagksaesqpdasvtnfdLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEESASAVGSMSAsttgakdvtgddlldgkslkiksadpmvktvpvegdlrtekdddeadswepeteleteesskdapestSALMSDGPASLRSlsgksddggsSVGSLSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDskpaslkidtsakefsgyiptvgrvpdSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNANHsvhdsgerrysslripseasgerrysslripsedsgerrysslrfpledsgerrysslhipsedsserrysglgipsedsgerrYSSLRtapssdswnyqPATVHGCDLAHLSRMARDRNSDflngqrespapkspslgpTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQSERSYFDVSSSGPADSVSipsssakkyhslpdISGLSVPLREQFMSNkgarvdgsiaykpsIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFGVVDKSKSSAISQEATSIADAEAKLLQSFRVCVVKILQLEGsewlfrhndgadedlIDRVAAREKFLYeaetreknqvvhmgESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLslmesrpelwGKYTYVLNRLQVNF
MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSpvvpfafvlvlffSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRAETFTEREEDNSKEARYLVEEPLEKRESVASAGKSAESQPDASVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEESASAVGSMSASTTGAKDVTGDDLLDGKSLKIKSADPMVKTVPVEGDLRTEKDDDEADSWepeteleteeSSKDAPESTSALMSDGPAslrslsgksddggssvgslsrlvglgRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYIPTVGRVPDSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNANHSVHDSGERRYSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSGERRYSSLHIPSEDSSERRYSGLGIPSEDSGERRYSSLRTAPSSDSWNYQPATVHGCDLAHLSRMARDRNSDFLNGQRESPAPKSPSLGPTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQSERSYFDVSSSGPADSVSIPSSSAKKYHSLPDISGLSVPLREQFMSNKGARVDGSIAYKPSIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFGVVDKSKSSAISQEATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVNF
*********YQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPL*************W********************************************************************AAI******IAFPSPTICF**************************************************************************************************************RLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSK***LKIDTSAKEFSGYIPTVGRV********************************************************************************************************************************************************ATVHGCDLA******************************************************************************************************************************************************************IYRDTF***********SLWS***FEQFG******************DAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQ***
**************LYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQ******KGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNN*****************************************************VTNFDLDLPETI**********************************************KDV***********************************DE*DSWE*************************************************VGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKP************************************************************************************SLRIPSEASGERRYSSLR********************************************************************NYQPATVHGCD**************************************************************************************************YHSLPDISGLSVPLR*************************************************************************************************ADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETRE****************************SFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVN*
********NYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRAE**********KEARYLVEE*********************SVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEE*************GAKDVTGDDLLDGKSLKIKSADPMVKTVPVEGDL***************************************ASLR***************LSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYIPTVGRVPDSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNA***********YSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSGERRYSSLHIP*********SGLGIPS******************SWNYQPATVHGCDLAHLSRMARDRNSD*************PSLGPTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQS**************************HSLPDISGLSVPLREQFMSNKGARVDGSIAYKPSIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFG*************ATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVNF
*****A***YQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNNA**WSWE************************************************NFDLDLPETIMESDQEIRLAAI**********************************KDVTGDDLLDGKSLKIKSADPMVKTVPVEGD**********************************************************SLSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYIPTVG****************************************MQLLD*YAQNANHSVHDSGERRYSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSG******************************************SDSWNYQPATVHGCDLAHLSRMARDRNSDFLNGQRESPAPKSPSLGPTNYMDSVAFALGQK************************************SG***SVSIPS***K*YHSLPDISGLSVPLREQFMSNKG**********PSIGRPSY*P*******************SPSKIYRDT**************W*******F***************TSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYL*********LKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVNF
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MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRAETFTEREEDNSKEARYLVEEPLEKRESVASAGKSAESQPDASVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEESASAVGSMSASTTGAKDVTGDDLLDGKSLKIKSADPMVKTVPVEGDLRTEKDDDEADSWEPETELETEESSKDAPESTSALMSDGPASLRSLSGKSDDGGSSVGSLSRLVGLGRAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYIPTVGRVPDSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNANHSVHDSGERRYSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSGERRYSSLHIPSEDSSERRYSGLGIPSEDSGERRYSSLRTAPSSDSWNYQPATVHGCDLAHLSRMARDRNSDFLNGQRESPAPKSPSLGPTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQSERSYFDVSSSGPADSVSIPSSSAKKYHSLPDISGLSVPLREQFMSNKGARVDGSIAYKPSIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFGVVDKSKSSAISQEATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQVNF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1299 2.2.26 [Sep-21-2011]
Q9S8141294 Ethylene-insensitive prot yes no 0.617 0.619 0.515 0.0
Q553K4629 Natural resistance-associ yes no 0.277 0.573 0.297 2e-42
Q98I99454 Divalent metal cation tra yes no 0.284 0.814 0.297 1e-39
P65545456 Divalent metal cation tra yes no 0.299 0.853 0.284 3e-38
P65544456 Divalent metal cation tra yes no 0.299 0.853 0.284 3e-38
Q8ZSB0442 Divalent metal cation tra yes no 0.304 0.893 0.273 3e-37
Q89K67450 Divalent metal cation tra yes no 0.306 0.884 0.293 3e-37
Q9RPF3439 Divalent metal cation tra yes no 0.285 0.845 0.318 6e-37
Q4L5B9446 Divalent metal cation tra yes no 0.279 0.813 0.291 1e-36
Q931T9450 Divalent metal cation tra yes no 0.280 0.811 0.282 4e-36
>sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1 Back     alignment and function desciption
 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/865 (51%), Positives = 581/865 (67%), Gaps = 63/865 (7%)

Query: 1   MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFN 60
           M+AE+ N   Q G + R+VPA+LPVLL+S+GY+DPGKW   IEGGA FG+DLVA+ L+FN
Sbjct: 1   MEAEIVNVRPQLGFIQRMVPALLPVLLVSVGYIDPGKWVANIEGGARFGYDLVAITLLFN 60

Query: 61  FAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGL 120
           FAAI CQY++ARI+VVTGK LAQIC EEYDKWTC+F+G+Q E S ILLDLTMV+G+AH L
Sbjct: 61  FAAILCQYVAARISVVTGKHLAQICNEEYDKWTCMFLGIQAEFSAILLDLTMVVGVAHAL 120

Query: 121 NLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSY 180
           NLL GVELST VFLAA DA LFP FA           +F EN  A  + I +AG++LL Y
Sbjct: 121 NLLFGVELSTGVFLAAMDAFLFPVFA-----------SFLENGMANTVSIYSAGLVLLLY 169

Query: 181 VLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNIS 240
           V GVL+SQ EIPLS+NG+LT+ +G+SAF++M LLGAS++PHNFY+HS          ++ 
Sbjct: 170 VSGVLLSQSEIPLSMNGVLTRLNGESAFALMGLLGASIVPHNFYIHSYFAGESTSSSDVD 229

Query: 241 KGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFC 300
           K +LC DH FAI  +FSG+ +VNYVLMN+AAN+F+STGLV+LTF DA+SLME        
Sbjct: 230 KSSLCQDHLFAIFGVFSGLSLVNYVLMNAAANVFHSTGLVVLTFHDALSLME-------- 281

Query: 301 SNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFL 360
                                QVF SP++P  F+++LFFS+QI A+ W   G+VVL DFL
Sbjct: 282 ---------------------QVFMSPLIPVVFLMLLFFSSQITALAWAFGGEVVLHDFL 320

Query: 361 RLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVAS 420
           +++IP WLH ATIRI+++ PALYCVWTSGA+G+YQLLIFTQV+VA+MLP SVIPLFR+AS
Sbjct: 321 KIEIPAWLHRATIRILAVAPALYCVWTSGADGIYQLLIFTQVLVAMMLPCSVIPLFRIAS 380

Query: 421 SRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFA 480
           SRQIMGVHKI Q  EFL L TF+G LGL ++F+VEM+FG+SDW G LRWN+    ++ + 
Sbjct: 381 SRQIMGVHKIPQVGEFLALTTFLGFLGLNVVFVVEMVFGSSDWAGGLRWNTVMGTSIQYT 440

Query: 481 VFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRAETFTEREEDNSKEARYLVEE 540
             L+++  SLCL+LWLA TPL+SAS+R  A  W+ + Q A ++   +E+  +       E
Sbjct: 441 TLLVSSCASLCLILWLAATPLKSASNRAEAQIWNMDAQNALSYPSVQEEEIERTETRRNE 500

Query: 541 PLEKRESVASAGKSAESQPD-ASVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPT 599
                ES+       + Q D  SVT+   DLPE I+ +DQEIR +  EE   ++ + +  
Sbjct: 501 ----DESIVRLESRVKDQLDTTSVTSSVYDLPENILMTDQEIRSSPPEERELDVKYSTSQ 556

Query: 600 ICFQEESASAVGSMSASTTGAKDVTGDDLL-DGKSLKIKSADPMVKTVPVEGDLRTEKDD 658
           +   +E +         +T   +V+  DL+ + K  KI+   P+ K V +E + +  + D
Sbjct: 557 VSSLKEDSDVKEQSVLQSTVVNEVSDKDLIVETKMAKIEPMSPVEKIVSMENNSKFIEKD 616

Query: 659 DEADSWEPETELETEESSKDAPESTSALMSDGPASLRSLSGKSDDGGSSVGSLSRLVGLG 718
            E  SW      ETEE++K AP S   + SDGP S RSLSG+     S  GSLSRL GLG
Sbjct: 617 VEGVSW------ETEEATKAAPTSNFTVGSDGPPSFRSLSGEGG---SGTGSLSRLQGLG 667

Query: 719 RAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPA-SLKIDTSAKEF-SG 776
           RAARR L+ +LDEFWG LYD+HGQ+  EARAKKLD + G D K A S+K D+  K+  SG
Sbjct: 668 RAARRHLSAILDEFWGHLYDFHGQLVAEARAKKLDQLFGTDQKSASSMKADSFGKDISSG 727

Query: 777 YI--PTVGRVPDSLLNSSLYDSPK-HRVQNSMDSSYGVQRGSS-SLWSNQMQLLDAYAQN 832
           Y   PT   + DS + SSLYDS K  R   S+DS YG+QRGSS S   N+MQ+L AY   
Sbjct: 728 YCMSPTAKGM-DSQMTSSLYDSLKQQRTPGSIDSLYGLQRGSSPSPLVNRMQMLGAYGNT 786

Query: 833 A-NHSVHDSGERRYSSLRIPSEASG 856
             N++ ++  ERRYSSLR PS + G
Sbjct: 787 TNNNNAYELSERRYSSLRAPSSSEG 811
Central factor in signaling pathways regulated by ethylene (ET), and involved in various processes including development, plant defense, senescence, nucleotide sugar flux, and tropisms. Necessary for ethylene-mediated gene regulation, and for the induction of some genes by ozone. Acts downstream of ET receptors, and upstream of ethylene regulated transcription factors. Required for cytokinin-mediated processes. Seems to be implicated in cross-talk between ET, jasmonate and other pathways. Probably not involved in iron uptake.
Arabidopsis thaliana (taxid: 3702)
>sp|Q553K4|NRAM2_DICDI Natural resistance-associated macrophage protein 2 homolog OS=Dictyostelium discoideum GN=nramp2 PE=3 SV=1 Back     alignment and function description
>sp|Q98I99|MNTH_RHILO Divalent metal cation transporter MntH OS=Rhizobium loti (strain MAFF303099) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|P65545|MNTH_BRUSU Divalent metal cation transporter MntH OS=Brucella suis biovar 1 (strain 1330) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|P65544|MNTH_BRUME Divalent metal cation transporter MntH OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|Q8ZSB0|MNTH_NOSS1 Divalent metal cation transporter MntH OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|Q89K67|MNTH_BRAJA Divalent metal cation transporter MntH OS=Bradyrhizobium japonicum (strain USDA 110) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|Q9RPF3|MNTH1_PSEAE Divalent metal cation transporter MntH 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mntH1 PE=3 SV=2 Back     alignment and function description
>sp|Q4L5B9|MNTH_STAHJ Divalent metal cation transporter MntH OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mntH PE=3 SV=1 Back     alignment and function description
>sp|Q931T9|MNTH_STAAM Divalent metal cation transporter MntH OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=mntH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1299
2240687291310 EIN2 -like protein, nramp transporter [P 0.892 0.884 0.568 0.0
1892125851309 sickle [Medicago truncatula] 0.878 0.871 0.513 0.0
3575107171392 Ethylene insensitive [Medicago truncatul 0.878 0.819 0.484 0.0
2254400091318 PREDICTED: ethylene-insensitive protein 0.622 0.613 0.621 0.0
2241387101259 EIN2 -like protein, nramp transporter [P 0.640 0.660 0.600 0.0
1477831571346 hypothetical protein VITISV_043425 [Viti 0.622 0.601 0.601 0.0
2555569781290 ethylene insensitive protein, putative [ 0.618 0.622 0.590 0.0
3565482911313 PREDICTED: ethylene-insensitive protein 0.617 0.610 0.552 0.0
2667061861304 ethylene insensitive 2 [Prunus persica] 0.612 0.610 0.590 0.0
356536969 1406 PREDICTED: ethylene-insensitive protein 0.617 0.570 0.542 0.0
>gi|224068729|ref|XP_002326185.1| EIN2 -like protein, nramp transporter [Populus trichocarpa] gi|222833378|gb|EEE71855.1| EIN2 -like protein, nramp transporter [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1379 bits (3568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1308 (56%), Positives = 886/1308 (67%), Gaps = 149/1308 (11%)

Query: 1    MDAELANSNYQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFN 60
            M+ E  N+N+    L R +PA+ P LLI+IGYVDPGKWA  +EGGA FGFDLV  ML+FN
Sbjct: 1    METEFVNANHLPHFLRRALPALGPGLLIAIGYVDPGKWAATVEGGARFGFDLVLPMLIFN 60

Query: 61   FAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFIGVQTELSVILLDLTMVLGIAHGL 120
            F AI CQYLSARI VVTGKDLAQIC +EYDKWTC+F+GVQ  LSVI LDLTM+LGIAHGL
Sbjct: 61   FVAILCQYLSARIGVVTGKDLAQICSDEYDKWTCMFLGVQAALSVIALDLTMILGIAHGL 120

Query: 121  NLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLWICTAGIILLSY 180
            NLL G++LSTCVFLAA DA+LFP FA  L           E  KA  L  C AG +LL Y
Sbjct: 121  NLLFGMDLSTCVFLAAVDAVLFPVFATLL-----------ERCKASFLSTCIAGFLLLLY 169

Query: 181  VLGVLISQPEIPLSVNGMLTKFSGDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNIS 240
              GVLISQPEIPL +NGM  K S DSAF++MSLLGAS+MPHNF+LHSS+V +HQG  NIS
Sbjct: 170  FFGVLISQPEIPLPMNGMPIKLSEDSAFALMSLLGASIMPHNFFLHSSMVLQHQGPPNIS 229

Query: 241  KGALCHDHFFAILCIFSGIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFC 300
            KGALC +HFFAILCIFSGIY+VNYVLMNSAAN+FYSTGLVLLTF DAMSLME        
Sbjct: 230  KGALCLNHFFAILCIFSGIYLVNYVLMNSAANVFYSTGLVLLTFPDAMSLMEP------- 282

Query: 301  SNNNYHLLHTHPMISIRIVEMQVFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFL 360
                                  VFRSPV    F L+LFF+N I A+ WNL GQVVLQ FL
Sbjct: 283  ----------------------VFRSPVALCVFSLILFFANHITALTWNLGGQVVLQGFL 320

Query: 361  RLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVAS 420
            RLDIP WL  ATIRII++VPALYCVWTSG EG+YQLLIFTQVMVA++LPSSVIPLFR+AS
Sbjct: 321  RLDIPNWLQRATIRIIAVVPALYCVWTSGVEGIYQLLIFTQVMVALLLPSSVIPLFRIAS 380

Query: 421  SRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFA 480
            SRQ+M  +KIS + EFL LI+FMGMLG+K+IF+VEM+FG+SDW GNLRW++ G  +  + 
Sbjct: 381  SRQVMAAYKISAFLEFLALISFMGMLGIKIIFVVEMVFGDSDWAGNLRWSTSGGSSTSYT 440

Query: 481  VFLITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQR--AETFTEREEDNSKEARYLV 538
            V LIT  +S CLMLWLA TPL+SA+  + A  W+W+ Q   +E   + EE+   E RY  
Sbjct: 441  VLLITACSSFCLMLWLAATPLKSATHLD-AQVWNWDVQNTVSEPSMQIEEEIFSETRYTE 499

Query: 539  EEPLEKRESVASAGKSAESQPDASVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSP 598
            EE +  +E ++  GKSAES  D +V N D DLP TIMESDQE  L  I+ENH  I F SP
Sbjct: 500  EESIGGQEQLSGPGKSAESYSDVTVANADPDLPVTIMESDQEHHLTTIKENHSEITFSSP 559

Query: 599  TICFQEESASAVGSMSASTTGAKDVTGDDLLDGKSLKIKSADPMVKTVPVEGDLRTEKDD 658
               ++EE++  + S+S S      V G +LL  K + I+S D + KTV ++GD   EK+D
Sbjct: 560  GTFYEEETSPIIESVSLSAA-MNVVPGSELLGAKKIDIESMDSVEKTVDIDGDFHAEKED 618

Query: 659  DEADSWEPETELETEESSKDAPESTSALMSDGPASLRSLSGKSDDGGSSVGSLSRLVGLG 718
            DE DSWEPE      ESSK  P STS+L SDGP S RSLSGKSD+GG+  GSLSRL GLG
Sbjct: 619  DEGDSWEPE------ESSKGVPGSTSSLTSDGPGSFRSLSGKSDEGGNGAGSLSRLAGLG 672

Query: 719  RAARRQLAGVLDEFWGQLYDYHGQITQEARAKKLDLVLGVDSKPASLKIDTSAKEFSGYI 778
            RAARRQLA VLDEFWGQLYD+HGQ TQEA+ KKLD  LGVD KP+ LK+DT+ KEF    
Sbjct: 673  RAARRQLASVLDEFWGQLYDFHGQTTQEAKTKKLD-ALGVDLKPSLLKVDTAGKEF---- 727

Query: 779  PTVGRVPDSLLNSSLYDSPKHRVQNSMDSSYGVQRGSSSLWSNQMQLLDAYAQNANHSVH 838
                        S  + S   R  +S                   Q+  +   + NH   
Sbjct: 728  ------------SGYFSSVGGRASDS-------------------QIHSSLGDSPNH--- 753

Query: 839  DSGERRYSSLRIPSEASGERRYSSLRIPSEDSGERRYSSLRFPLEDSGERRYSSLHIPSE 898
                     LR+PS            I S   G+R  SSL             S H+   
Sbjct: 754  ---------LRVPSN-----------IDSSYGGQRGPSSLW------------SNHMQLM 781

Query: 899  DSSERRYSGLGIPSEDSGERRYSSLRTAPSSDSWNYQPATVHGCDLAHL-SRMARDRNSD 957
            D+  +   G      DS ERRYSS+ T PSSD    QPATVHG  +A + +++A++R S 
Sbjct: 782  DAYAQ---GPSRSIADSSERRYSSVHTLPSSDGRCIQPATVHGYQIASIINQIAKERGSS 838

Query: 958  FLNGQRESPAPKSPSLGPTNYMDSVAFALGQKLQNGRSTVQASGFQQNLAVSRNAQLQSE 1017
             LNGQ +SPAP SPSLGP NY D +  A+GQKLQNG S+ Q  GFQ NLAVSRN+ LQSE
Sbjct: 839  SLNGQMDSPAPISPSLGPRNYRDPLTVAMGQKLQNGPSSSQPPGFQ-NLAVSRNSTLQSE 897

Query: 1018 RSYFDVSSSGPADSVSIPSSSAKKYHSLPDISGLSVPLREQFMSNKGARVDGSIAYKPSI 1077
            R Y DV SSG AD     S++ KKYHSLPDI+GL+ P R+ +MS K A+ D S+ +  S+
Sbjct: 898  RHYHDVYSSGSADDAG-KSANTKKYHSLPDIAGLAGPYRDLYMSEKNAQWDKSVGFGSSV 956

Query: 1078 GRPSYEPSLYSNPGSRAGTTLAFDELSPSKIYRDTFPMQLSSGLDTGSLWSRQPFEQFGV 1137
             R  YE S YSN  S AG             + D F   ++   D GSLWSRQPFEQFGV
Sbjct: 957  SRTGYEQSYYSNTRSGAGAG-----------HGDAFSFHMTP--DPGSLWSRQPFEQFGV 1003

Query: 1138 VDKSK---------SSAISQEATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGAD 1188
             DKS+         S++I++E  S  D EA+LLQSFR C+VK+L+LEGS+WLFR NDGAD
Sbjct: 1004 ADKSRVVGSGLGNRSNSINREVISPVDPEAQLLQSFRRCIVKLLKLEGSDWLFRQNDGAD 1063

Query: 1189 EDLIDRVAAREKFLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDEASFTNFMVSSVP 1248
            EDLIDRVAARE++LYEAETRE N V +MGES YL  +RK GS L+ND+A+ TN MVSSVP
Sbjct: 1064 EDLIDRVAARERYLYEAETREMNCVANMGESPYLYSDRKSGSVLRNDDAAITNIMVSSVP 1123

Query: 1249 HCGDGCIWKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQ 1296
            +CG+GC+W+VDLI+SFGVWCIHRIL+LSLMESRPELWGKYTYVLNRLQ
Sbjct: 1124 NCGEGCVWRVDLIISFGVWCIHRILDLSLMESRPELWGKYTYVLNRLQ 1171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|189212585|gb|ACD84889.1| sickle [Medicago truncatula] Back     alignment and taxonomy information
>gi|357510717|ref|XP_003625647.1| Ethylene insensitive [Medicago truncatula] gi|355500662|gb|AES81865.1| Ethylene insensitive [Medicago truncatula] Back     alignment and taxonomy information
>gi|225440009|ref|XP_002276399.1| PREDICTED: ethylene-insensitive protein 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224138710|ref|XP_002322882.1| EIN2 -like protein, nramp transporter [Populus trichocarpa] gi|222867512|gb|EEF04643.1| EIN2 -like protein, nramp transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147783157|emb|CAN66374.1| hypothetical protein VITISV_043425 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255556978|ref|XP_002519522.1| ethylene insensitive protein, putative [Ricinus communis] gi|223541385|gb|EEF42936.1| ethylene insensitive protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548291|ref|XP_003542536.1| PREDICTED: ethylene-insensitive protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|266706186|gb|ACY78397.1| ethylene insensitive 2 [Prunus persica] Back     alignment and taxonomy information
>gi|356536969|ref|XP_003537004.1| PREDICTED: ethylene-insensitive protein 2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1299
TAIR|locus:21425941294 EIN2 "ETHYLENE INSENSITIVE 2" 0.405 0.407 0.435 9.5e-278
DICTYBASE|DDB_G0275815629 nramp2 "putative manganese tra 0.215 0.445 0.303 3.7e-45
TIGR_CMR|BA_1880431 BA_1880 "transport protein, NR 0.201 0.607 0.312 6e-34
TIGR_CMR|CHY_1628398 CHY_1628 "putative manganese t 0.206 0.673 0.294 1.4e-30
UNIPROTKB|Q0D7E4518 NRAMP1 "Metal transporter Nram 0.189 0.474 0.261 2.6e-28
TAIR|locus:2200437527 NRAMP6 "NRAMP metal ion transp 0.148 0.366 0.317 6.5e-28
TAIR|locus:2025677532 NRAMP1 "natural resistance-ass 0.150 0.366 0.325 9.6e-28
SGD|S000004024473 SMF3 "Putative divalent metal 0.301 0.826 0.252 2.6e-27
UNIPROTKB|P0A769412 mntH [Escherichia coli K-12 (t 0.182 0.575 0.311 1.1e-26
SGD|S000001092549 SMF2 "Divalent metal ion trans 0.170 0.404 0.309 1.1e-25
TAIR|locus:2142594 EIN2 "ETHYLENE INSENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1066 (380.3 bits), Expect = 9.5e-278, Sum P(3) = 9.5e-278
 Identities = 240/551 (43%), Positives = 328/551 (59%)

Query:   315 SIRIVEMQVFRSXXXXXXXXXXXXXSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIR 374
             ++ ++E QVF S             S+QI A+ W   G+VVL DFL+++IP WLH ATIR
Sbjct:   276 ALSLME-QVFMSPLIPVVFLMLLFFSSQITALAWAFGGEVVLHDFLKIEIPAWLHRATIR 334

Query:   375 IISIVPALYCVWTSGAEGVYQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKISQYH 434
             I+++ PALYCVWTSGA+G+YQLLIFTQV+VA+MLP SVIPLFR+ASSRQIMGVHKI Q  
Sbjct:   335 ILAVAPALYCVWTSGADGIYQLLIFTQVLVAMMLPCSVIPLFRIASSRQIMGVHKIPQVG 394

Query:   435 EFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVFLITTFTSLCLML 494
             EFL L TF+G LGL ++F+VEM+FG+SDW G LRWN+    ++ +   L+++  SLCL+L
Sbjct:   395 EFLALTTFLGFLGLNVVFVVEMVFGSSDWAGGLRWNTVMGTSIQYTTLLVSSCASLCLIL 454

Query:   495 WLATTPLRSASSRNNAPDWSWEFQRAETFTEREEDNSKEARYLVEEPLEKRESVASAGKS 554
             WLA TPL+SAS+R  A  W+ + Q A ++   +E+  +      E    + ES+      
Sbjct:   455 WLAATPLKSASNRAEAQIWNMDAQNALSYPSVQEEEIERT----ETRRNEDESIVRLESR 510

Query:   555 AESQPDA-SVTNFDLDLPETIMESDQEIRLAAIEENHPNIAFPSPTICFQEESASAVGSM 613
              + Q D  SVT+   DLPE I+ +DQEIR +  EE   ++ + +  +   +E +      
Sbjct:   511 VKDQLDTTSVTSSVYDLPENILMTDQEIRSSPPEERELDVKYSTSQVSSLKEDSDVKEQS 570

Query:   614 SASTTGAKDVTGDDLL-DGKSLKIKSADPMVKTVPVEGDLRTEKDDDEADSWXXXXXXXX 672
                +T   +V+  DL+ + K  KI+   P+ K V +E + +  + D E  SW        
Sbjct:   571 VLQSTVVNEVSDKDLIVETKMAKIEPMSPVEKIVSMENNSKFIEKDVEGVSWETEE---- 626

Query:   673 XXSSKDAPESTSALMSDGPAXXXXXXXXXXXXXXXXXXXXXXXXXXRAARRQLAGVLDEF 732
               ++K AP S   + SDGP                           RAARR L+ +LDEF
Sbjct:   627 --ATKAAPTSNFTVGSDGPPSFRSLSGEGGSGTGSLSRLQGLG---RAARRHLSAILDEF 681

Query:   733 WGQLYDYHGQITQEARAKKLDLVLGVDSKPAS-LKIDTSAKEFS-GYI--PTVGRVPDSL 788
             WG LYD+HGQ+  EARAKKLD + G D K AS +K D+  K+ S GY   PT   + DS 
Sbjct:   682 WGHLYDFHGQLVAEARAKKLDQLFGTDQKSASSMKADSFGKDISSGYCMSPTAKGM-DSQ 740

Query:   789 LNSSLYDSPKH-RVQNSMDSSYGVQRGSS-SLWSNQMQLLDAYAQNANHS-VHDSGERRY 845
             + SSLYDS K  R   S+DS YG+QRGSS S   N+MQ+L AY    N++  ++  ERRY
Sbjct:   741 MTSSLYDSLKQQRTPGSIDSLYGLQRGSSPSPLVNRMQMLGAYGNTTNNNNAYELSERRY 800

Query:   846 SSLRIPSEASG 856
             SSLR PS + G
Sbjct:   801 SSLRAPSSSEG 811
GO:0005215 "transporter activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0008219 "cell death" evidence=NAS
GO:0006979 "response to oxidative stress" evidence=TAS
GO:0009723 "response to ethylene stimulus" evidence=IMP
GO:0009725 "response to hormone stimulus" evidence=IMP
GO:0009753 "response to jasmonic acid stimulus" evidence=IMP
GO:0009873 "ethylene mediated signaling pathway" evidence=TAS
GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0009871 "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" evidence=TAS
GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS
GO:0009408 "response to heat" evidence=IMP
GO:0031348 "negative regulation of defense response" evidence=IMP
GO:0010119 "regulation of stomatal movement" evidence=IMP
GO:0001736 "establishment of planar polarity" evidence=IGI
GO:0048765 "root hair cell differentiation" evidence=IGI
GO:0050832 "defense response to fungus" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009651 "response to salt stress" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0010150 "leaf senescence" evidence=IMP
GO:0002237 "response to molecule of bacterial origin" evidence=IMP
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0006869 "lipid transport" evidence=RCA
GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA
GO:0009755 "hormone-mediated signaling pathway" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
GO:0048825 "cotyledon development" evidence=RCA
GO:0009926 "auxin polar transport" evidence=IMP
DICTYBASE|DDB_G0275815 nramp2 "putative manganese transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|BA_1880 BA_1880 "transport protein, NRAMP family" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1628 CHY_1628 "putative manganese transpoter" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|Q0D7E4 NRAMP1 "Metal transporter Nramp1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2200437 NRAMP6 "NRAMP metal ion transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025677 NRAMP1 "natural resistance-associated macrophage protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
SGD|S000004024 SMF3 "Putative divalent metal ion transporter involved in iron homeostasis" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|P0A769 mntH [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
SGD|S000001092 SMF2 "Divalent metal ion transporter involved in manganese homeostasis" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S814EIN2_ARATHNo assigned EC number0.51560.61730.6197yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_280080
EIN2 -like protein, nramp transporter (1310 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1299
pfam01566364 pfam01566, Nramp, Natural resistance-associated ma 3e-83
PRK00701439 PRK00701, PRK00701, manganese transport protein Mn 3e-66
COG1914416 COG1914, MntH, Mn2+ and Fe2+ transporters of the N 3e-55
TIGR01197390 TIGR01197, nramp, NRAMP (natural resistance-associ 5e-50
>gnl|CDD|216575 pfam01566, Nramp, Natural resistance-associated macrophage protein Back     alignment and domain information 
 Score =  276 bits (709), Expect = 3e-83
 Identities = 106/406 (26%), Positives = 181/406 (44%), Gaps = 55/406 (13%)

Query: 38  WAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEYDKWTCVFI 97
            A  I+ GA FG+ L+ ++L+ N  AI  Q LSAR+ +VTGK LA++  E + +     +
Sbjct: 1   IATNIQAGARFGYSLLWVLLLSNLMAIVLQELSARLGLVTGKGLAELIRERFGRPVGWLL 60

Query: 98  GVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIML 157
            +  EL+    DL   +G A  LNLL G+ L   V + A   +L  F     +       
Sbjct: 61  WILAELANAATDLAEFIGGAIALNLLFGIPLYIGVVITAVLVLLLLFLQRGGY------- 113

Query: 158 NFQENYKAKLLWICTAGIILLSYVLGVLISQPEIPLSVNGMLT-KFSG-DSAFSIMSLLG 215
                 +  ++ +    +I LS++  + + +P+      G++     G  S    +++LG
Sbjct: 114 ---RRLERVIIALV--AVIALSFIAELFLVKPDWGEVAAGLVVPSLPGSGSLLLAIAILG 168

Query: 216 ASMMPHNFYLHSSIV--RRHQGQVNISKGALCHDHFFAIL-CIFSGIYMVNYVLMNSAAN 272
           A++MPHN +LHSS+V  R      + ++ AL +     I+  + +G+  +N  ++  AA 
Sbjct: 169 ATVMPHNLFLHSSLVQERGWTIDDDAARRALRYARIDTIIALVLAGL--INAAILIVAAA 226

Query: 273 LFYSTG-LVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQVFRSPVVPF 331
           + +  G   + T  DA + +E L                                     
Sbjct: 227 VLHGAGGTDVTTAADAAAALEPLL-----------------------------GPKAASV 257

Query: 332 AFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAE 391
            F L L  +     +   L+G  V++ FL   IP WL     R  +  PAL  +   GA 
Sbjct: 258 LFALGLLAAGLSSTITGTLAGAYVMEGFLGWRIPLWLRRLITRAKAFYPALAVILLGGAL 317

Query: 392 GV------YQLLIFTQVMVAIMLPSSVIPLFRVASSRQIMGVHKIS 431
                    QLL+ +QV+++++LP ++IPL  + SSR++MG    S
Sbjct: 318 LALLGGSPVQLLVLSQVLLSLLLPFALIPLLLLTSSRKLMGEFVNS 363

The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations. Length = 364
>gnl|CDD|234815 PRK00701, PRK00701, manganese transport protein MntH; Reviewed Back     alignment and domain information
>gnl|CDD|224826 COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|162246 TIGR01197, nramp, NRAMP (natural resistance-associated macrophage protein) metal ion transporters Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1299
KOG1291503 consensus Mn2+ and Fe2+ transporters of the NRAMP 100.0
PRK00701439 manganese transport protein MntH; Reviewed 100.0
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 100.0
TIGR01197390 nramp NRAMP (natural resistance-associated macroph 100.0
PF01566358 Nramp: Natural resistance-associated macrophage pr 100.0
TIGR00813407 sss transporter, SSS family. have different number 98.85
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 98.83
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 98.75
PRK09442483 panF sodium/panthothenate symporter; Provisional 98.7
PRK15419502 proline:sodium symporter PutP; Provisional 98.7
PRK12488549 acetate permease; Provisional 98.7
PRK09395551 actP acetate permease; Provisional 98.64
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 98.64
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 98.61
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 98.61
TIGR03648552 Na_symport_lg probable sodium:solute symporter, VC 98.44
COG1457442 CodB Purine-cytosine permease and related proteins 98.42
COG0591493 PutP Na+/proline symporter [Amino acid transport a 98.35
PRK15132403 tyrosine transporter TyrP; Provisional 98.33
PRK11017404 codB cytosine permease; Provisional 98.24
PRK10484523 putative transporter; Provisional 98.23
PRK11375484 allantoin permease; Provisional 98.23
PRK10483414 tryptophan permease; Provisional 98.21
PRK13629443 threonine/serine transporter TdcC; Provisional 98.19
TIGR00837381 araaP aromatic amino acid transport protein. aroma 98.17
TIGR00814397 stp serine transporter. The HAAAP family includes 98.1
PRK10238456 aromatic amino acid transporter; Provisional 98.1
PRK11387471 S-methylmethionine transporter; Provisional 98.07
PRK09664415 tryptophan permease TnaB; Provisional 98.06
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 98.02
PRK15049499 L-asparagine permease; Provisional 98.01
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 97.95
COG3949349 Uncharacterized membrane protein [Function unknown 97.93
TIGR00930953 2a30 K-Cl cotransporter. 97.92
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 97.84
PF05525427 Branch_AA_trans: Branched-chain amino acid transpo 97.84
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 97.84
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 97.8
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 97.77
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 97.76
PRK10580457 proY putative proline-specific permease; Provision 97.68
TIGR00908442 2A0305 ethanolamine permease. The three genes used 97.64
PRK10249458 phenylalanine transporter; Provisional 97.64
COG0814415 SdaC Amino acid permeases [Amino acid transport an 97.62
COG4147529 DhlC Predicted symporter [General function predict 97.48
TIGR00909429 2A0306 amino acid transporter. 97.47
PRK10746461 putative transport protein YifK; Provisional 97.45
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 97.43
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 97.43
TIGR00913478 2A0310 amino acid permease (yeast). 97.42
TIGR00907482 2A0304 amino acid permease (GABA permease). 97.37
PRK15433439 branched-chain amino acid transport system 2 carri 97.36
PRK10197446 gamma-aminobutyrate transporter; Provisional 97.36
TIGR00835425 agcS amino acid carrier protein. Members of the AG 97.3
COG0733439 Na+-dependent transporters of the SNF family [Gene 97.27
PRK11021410 putative transporter; Provisional 97.17
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 97.13
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 97.08
COG4145473 PanF Na+/panthothenate symporter [Coenzyme metabol 96.87
TIGR00911501 2A0308 L-type amino acid transporter. 96.84
PRK10644445 arginine:agmatin antiporter; Provisional 96.81
PRK11357445 frlA putative fructoselysine transporter; Provisio 96.79
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 96.78
TIGR00912359 2A0309 spore germination protein (amino acid perme 96.64
COG1115452 AlsT Na+/alanine symporter [Amino acid transport a 96.63
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 96.18
COG1114431 BrnQ Branched-chain amino acid permeases [Amino ac 96.06
PRK10836489 lysine transporter; Provisional 95.96
PRK10655438 potE putrescine transporter; Provisional 95.77
COG0531466 PotE Amino acid transporters [Amino acid transport 95.54
PRK09928679 choline transport protein BetT; Provisional 95.28
TIGR00906557 2A0303 cationic amino acid transport permease. 95.25
KOG1289550 consensus Amino acid transporters [Amino acid tran 94.84
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 94.46
COG1953497 FUI1 Cytosine/uracil/thiamine/allantoin permeases 94.4
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 93.89
PLN03074473 auxin influx permease; Provisional 93.84
KOG1286554 consensus Amino acid transporters [Amino acid tran 93.66
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 91.76
PRK15238496 inner membrane transporter YjeM; Provisional 91.29
PF03845320 Spore_permease: Spore germination protein; InterPr 90.79
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 90.58
COG1292537 BetT Choline-glycine betaine transporter [Cell env 90.43
KOG2349585 consensus Na+:iodide/myo-inositol/multivitamin sym 89.78
PF00209523 SNF: Sodium:neurotransmitter symporter family; Int 89.65
PRK13108460 prolipoprotein diacylglyceryl transferase; Reviewe 87.84
KOG1303437 consensus Amino acid transporters [Amino acid tran 86.79
COG0833541 LysP Amino acid transporters [Amino acid transport 86.77
COG1966575 CstA Carbon starvation protein, predicted membrane 84.64
>KOG1291 consensus Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-104  Score=900.01  Aligned_cols=472  Identities=30%  Similarity=0.450  Sum_probs=415.2

Q ss_pred             CCchhHHHHHhhhhhHHhhhhhcccCChHHHHHHhHHhhhhHHHHHHHHHHHHHHHHHHHhhhhheecCCcHHHHHHhhc
Q 000759           10 YQSGVLYRLVPAVLPVLLISIGYVDPGKWAVIIEGGAHFGFDLVALMLVFNFAAIFCQYLSARIAVVTGKDLAQICGEEY   89 (1299)
Q Consensus        10 ~~~~~~rkLLa~LGPGfLmSIAyIDPGNIaTdlqAGA~fGY~LLWVLLLAtIl~~llQeLAARLGVVTGK~LAEicRe~Y   89 (1299)
                      .++..|||+|+|+|||||||+||+||||++||+|+||++||+|||+++++|++++++|++|||||+||||||||+||++|
T Consensus        20 ~~~~s~~k~~~F~GPGfLmSIAYlDPGN~etdlqaGA~~~YkLLwilL~a~~~alllQ~LaARLGvVTG~hLAe~Cr~~Y   99 (503)
T KOG1291|consen   20 PPKFSWRKLWKFTGPGFLMSIAYLDPGNIETDLQAGARAGYKLLWILLLANFMALLLQRLAARLGVVTGKHLAEICREEY   99 (503)
T ss_pred             ccchHHHHHHHHcCCceEEEEEEecCCcchhhhhcchhhchhHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHc
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHhhcCcchhhHHHHhhhhhhHHHHHHH
Q 000759           90 DKWTCVFIGVQTELSVILLDLTMVLGIAHGLNLLMGVELSTCVFLAAADAILFPFFAGQLFIDELIMLNFQENYKAKLLW  169 (1299)
Q Consensus        90 pk~~~~~LwI~aeLAIIasDIaEVIGtAIALNLLFGIPL~iGVLITavdt~lLL~lgs~~~~d~~~~~~y~G~RKlE~l~  169 (1299)
                      |||+++.||+++|+|+|++|||||||+|+|+|+||++|+|+||+||++|+|+|+++.+            +|.||+|.++
T Consensus       100 pk~~~~~Lwi~aEiAiI~sDiqEVIGTAiAlniL~~IPL~~GVliTilD~f~fL~l~k------------yGiRklE~~~  167 (503)
T KOG1291|consen  100 PKWPRMVLWIMAEIAIIASDIQEVIGTAIALNILSNIPLWAGVLITILDTFLFLFLDK------------YGIRKLEAFF  167 (503)
T ss_pred             cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhc------------cchHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999887            5999999999


Q ss_pred             HHHHHHHHHHHHHhHhhhCCCccccc-cccccccC---CChHHHHHHHhcccchhHHHHHhHHhhhhccccccccchhch
Q 000759          170 ICTAGIILLSYVLGVLISQPEIPLSV-NGMLTKFS---GDSAFSIMSLLGASMMPHNFYLHSSIVRRHQGQVNISKGALC  245 (1299)
Q Consensus       170 ~~LI~IM~L~FVv~afis~Pd~geVl-~GLvP~lp---g~sl~~aVALLGATIMPhNlYLHSaLVqsR~~~~~~~k~al~  245 (1299)
                      .+++.+|++||.+++..++|+.++++ +|++|++.   ++.+++++|++||||||||+||||++||+|+.+++.+++...
T Consensus       168 ~~Li~~mai~F~~el~~~kp~~~~~l~g~fvP~~~~~~~~~~~~avgilGA~IMPHnlyLhSaLV~sR~~d~~~~~~v~e  247 (503)
T KOG1291|consen  168 AFLIVTMAISFGVELGVSKPSGGELLFGGFVPSLSGCGSEGLYQAVGILGAVIMPHNLYLHSALVQSRLIDRDVKKGVYE  247 (503)
T ss_pred             HHHHHHHHHHHheeEEEecCCchheeeeeecccccCCCCcHHHHHHHHhceeeccchhhhhhhhhcccccCHhhhhhhHH
Confidence            99999999999999999999999876 55679987   678999999999999999999999999999988764333222


Q ss_pred             hhH-HHHH-HHHHHHHHHHHHHHHHHh-hhccccCCcccccHHHHHHHHHHhhhhcccccCcccccccccchhhhhhhhh
Q 000759          246 HDH-FFAI-LCIFSGIYMVNYVLMNSA-ANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIRIVEMQ  322 (1299)
Q Consensus       246 ~D~-~~~i-~~i~lgsfLINlaImiva-AavLygtGi~V~T~~DAa~aLepL~ag~fc~~~~~~ll~~~~l~a~glv~a~  322 (1299)
                      .+. +... ...+.++|.||.+++.++ |+.||++.     ..+...         .|.++. +.....+++++|.++..
T Consensus       248 a~~y~~ies~ial~vsF~in~~VisvF~a~~f~~~t-----~~~v~g---------~~~~~s-~~a~~~Dl~~~~~~L~~  312 (503)
T KOG1291|consen  248 ANNYFPIESAIALFVSFSINLFVISVFTAAGFYNKT-----ILDVAG---------ACLYNS-NEADDADLFSAGLLLQC  312 (503)
T ss_pred             hhhcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCcc-----hhhhhh---------hhhcCC-CcchhhhhHHHHHHHHH
Confidence            222 2221 122346899999999999 99998763     222222         122221 11111245667777777


Q ss_pred             hcccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhCCCcCcchHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHH
Q 000759          323 VFRSPVVPFAFVLVLFFSNQIIAVNWNLSGQVVLQDFLRLDIPGWLHHATIRIISIVPALYCVWTSGAEGVYQLLIFTQV  402 (1299)
Q Consensus       323 ~LgG~~A~~IFAIGLLAAGqSSTITgT~AGQ~VmeGFLgl~~~~w~rrLitRlIAIIPALiVal~~G~~~~~qLLi~aQV  402 (1299)
                      .+ |++++++|++|||||||||||||||+||+|||||++|++++|.|+++||++||+|+++|+++.|.+++.+|++++||
T Consensus       313 ~~-g~~a~~Ifai~lLasGQSstitgTyaGQ~VmeGFLn~~l~~W~r~liTR~iAIiPtL~va~~~g~~~l~~l~~~~nv  391 (503)
T KOG1291|consen  313 YF-GPAALYIFAIGLLASGQSSTITGTYAGQFVMEGFLNLKLPPWLRRLITRSIAIIPTLIVALTSGEDGLSGLNDFLNV  391 (503)
T ss_pred             Hh-ccHHHHHHHHHHHHCCCcccceeeeeeeEeecccccccchHHHHHHHHHHHHHHhhhheeeeeCcccHHHHHHHHHH
Confidence            77 69999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCccchhHHHH
Q 000759          403 MVAIMLPSSVIPLFRVASSRQIMGVHKISQYHEFLVLITFMGMLGLKLIFMVEMIFGNSDWVGNLRWNSGGTVALPFAVF  482 (1299)
Q Consensus       403 I~SL~LPFaLIPLL~ftNsr~IMGefrNs~~~nILawli~llIi~LNI~fVv~~ifg~s~w~~~l~~~~~~~~~~~~~vl  482 (1299)
                      +++++|||+++|+++|+++|+|||+|+|+...+.++|.+.++++.+|.||+++++..       +    .+.-+..+..+
T Consensus       392 l~S~~LPFa~iPLl~ftS~r~IM~~~~~~~~~~~~~~~~~~~~~~in~y~~v~~~~~-------~----~~~~~~~~~~~  460 (503)
T KOG1291|consen  392 LQSLQLPFAVIPLLTFTSSRKIMGVFKNGLVTEELTWTVAALVLGINGYFLVSFFWS-------L----VGKHSKIVVTV  460 (503)
T ss_pred             HHHHhhhHHHhhHHhhhccHHHhhhhccCccceeeeehheeeeeeeeeEEeeeehhh-------h----cCCceeeehhH
Confidence            999999999999999999999999999999999999999999999999999866531       1    12122345566


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccccCCCCCCccccccc
Q 000759          483 LITTFTSLCLMLWLATTPLRSASSRNNAPDWSWEFQRA  520 (1299)
Q Consensus       483 ~i~~~~yl~f~lyL~~~pl~s~~~~~~~~~~~~~~~~~  520 (1299)
                      .+.+++|++|++||+.+|++..+...+++.|+++.++.
T Consensus       461 ~~~~~~y~~~i~yL~~~~l~~~~~~~~~~~~~~~~~~~  498 (503)
T KOG1291|consen  461 NVWTLAYLAFILYLAATCLNAYSIISLAMSSSMHAQNA  498 (503)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhcccc
Confidence            66788999999999999999999999999999999986

>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01197 nramp NRAMP (natural resistance-associated macrophage protein) metal ion transporters Back     alignment and domain information
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2 Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>PRK10484 putative transporter; Provisional Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)) Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>COG4147 DhlC Predicted symporter [General function prediction only] Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>PRK15433 branched-chain amino acid transport system 2 carrier protein BrnQ; Provisional Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only] Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>COG4145 PanF Na+/panthothenate symporter [Coenzyme metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>COG1115 AlsT Na+/alanine symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09928 choline transport protein BetT; Provisional Back     alignment and domain information
>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information
>KOG1286 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>COG1292 BetT Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2349 consensus Na+:iodide/myo-inositol/multivitamin symporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00209 SNF: Sodium:neurotransmitter symporter family; InterPro: IPR000175 Neurotransmitter transport systems are integral to the release, re-uptake and recycling of neurotransmitters at synapses Back     alignment and domain information
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed Back     alignment and domain information
>KOG1303 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1299
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.5 bits (104), Expect = 3e-04
 Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 74/227 (32%)

Query: 148 QLFIDELIMLNFQENYKAKLLWICTAGIILLSYVLGVL---ISQPEIPLSVN-----GML 199
           +  ++ L    +++ +    L +      + + +L ++   + + ++ + VN      ++
Sbjct: 360 ESSLNVLEPAEYRKMFDR--LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 200 TKFSGDSAFSIMSLLGASMMP--HNFYLHSSIVRRHQGQVNISKGALCHDHFFAILCIFS 257
            K   +S  SI S+     +   + + LH SIV  +    NI K     D          
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY----NIPK-TFDSDD-------LI 465

Query: 258 GIYMVNYVLMNSAANLFYSTGLVLLTFQDAMSLMEQLFAYSFCSNNNYHLLHTHPMISIR 317
             Y+  Y         FYS                             H+ H H + +I 
Sbjct: 466 PPYLDQY---------FYS-----------------------------HIGH-H-LKNIE 485

Query: 318 IVE-MQVFRSPVVPFAFVLVLFFSNQIIAV--NWNLSGQV--VLQDF 359
             E M +FR   + F F+       +I      WN SG +   LQ  
Sbjct: 486 HPERMTLFRMVFLDFRFL-----EQKIRHDSTAWNASGSILNTLQQL 527

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00