Citrus Sinensis ID: 000834
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1263 | 2.2.26 [Sep-21-2011] | |||||||
| Q94FN2 | 1978 | Protein MOR1 OS=Arabidops | yes | no | 0.955 | 0.610 | 0.726 | 0.0 | |
| Q5N749 | 1997 | Protein MOR1 OS=Oryza sat | yes | no | 0.967 | 0.611 | 0.674 | 0.0 | |
| Q14008 | 2032 | Cytoskeleton-associated p | yes | no | 0.519 | 0.322 | 0.297 | 1e-75 | |
| A2AGT5 | 2032 | Cytoskeleton-associated p | yes | no | 0.520 | 0.323 | 0.290 | 3e-71 | |
| Q1ZXQ8 | 2013 | Centrosomal protein 224 O | yes | no | 0.387 | 0.243 | 0.207 | 9e-20 |
| >sp|Q94FN2|MOR1_ARATH Protein MOR1 OS=Arabidopsis thaliana GN=MOR1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1810 bits (4688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 916/1260 (72%), Positives = 1041/1260 (82%), Gaps = 53/1260 (4%)
Query: 9 LCINLLVQVTTHFMWNSTSGLVSSLRFLRLFYFADIKGFLADVKPALLSALDAEYEKNPF 68
C ++ +Q +T N+T L+ +L F DIKGFL DVKPALLSALD EYEKNPF
Sbjct: 763 FCKDVGLQSSTAATRNATIKLLGALHK---FVGPDIKGFLNDVKPALLSALDTEYEKNPF 819
Query: 69 EGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVN 128
EGT PK+ V+ S ++S SSGG D LPREDIS K TP L+K ESPDWK+RLESIEAVN
Sbjct: 820 EGTAAPKRVVKTS-VSTSTSSGGLDSLPREDISTKITPNLLKGFESPDWKMRLESIEAVN 878
Query: 129 KILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVL 188
KILEEANKRIQP GTGELFGGLRGRL DSNKNLVM TL T+G VA+AMGPAVEK+SKG+L
Sbjct: 879 KILEEANKRIQPTGTGELFGGLRGRLLDSNKNLVMQTLTTIGGVAAAMGPAVEKASKGIL 938
Query: 189 SDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLS 248
SD+LKCLGDNKKHMRECTL LD WL AVHLDKM+PY+ ALTD K+GAEGRKDLFDWL+
Sbjct: 939 SDVLKCLGDNKKHMRECTLAALDLWLGAVHLDKMIPYIIIALTDGKMGAEGRKDLFDWLT 998
Query: 249 KQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGP 308
KQLTGLS F DA HLLKPAS AMTDKS+DVRKAAE CI EILR GQE IEKNLKDIQGP
Sbjct: 999 KQLTGLSDFVDAIHLLKPASTAMTDKSADVRKAAEGCISEILRVSGQEMIEKNLKDIQGP 1058
Query: 309 ALALILERIKLN------GASQVSMGPTSKSSSKVPKSASNGVSKHGNRAISSRVIPTKG 362
ALAL+LE+++ +S+ GP SK +K+ KS SNG K GNR SR +PTKG
Sbjct: 1059 ALALVLEKVRPGFVQEPFESSKAMAGPVSKGVTKISKSTSNGTLKQGNR---SRAVPTKG 1115
Query: 363 ARPESIMSVQDFAVQSQALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFR 422
+ I SV D A+QSQALLN KDSNKEDRER+VVRR KFE+ R EQIQ+LENDMMK+FR
Sbjct: 1116 S--SQITSVHDIAIQSQALLNTKDSNKEDRERVVVRRIKFEELRPEQIQDLENDMMKFFR 1173
Query: 423 EDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVL 482
EDL +RLLS DFKKQVDGLE+LQKALPS+ K+IIEVLD+LLRWFVLQFCKSNTTCLLKVL
Sbjct: 1174 EDLQKRLLSPDFKKQVDGLEILQKALPSVSKEIIEVLDVLLRWFVLQFCKSNTTCLLKVL 1233
Query: 483 EFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSATKT 542
EFLPELF+TLRDE Y +TE+EAA+FLPCL EK GHNIEKVREKMREL KQI+ YS KT
Sbjct: 1234 EFLPELFNTLRDEEYCMTEAEAAIFLPCLAEKLGHNIEKVREKMRELMKQIIQAYSVGKT 1293
Query: 543 LPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSLQIVASLTAERDGEIRKAAL 602
PYILEGLRSKNNRTRIEC DL+G+L++ G EI G LK L IVASLTAERDGE+RKAAL
Sbjct: 1294 YPYILEGLRSKNNRTRIECTDLIGYLLETCGTEIGGLLKYLNIVASLTAERDGELRKAAL 1353
Query: 603 NTLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKVREMEKKKEGKPGEARAALRRSVR 662
NT+ATGY+ILG DIW+YVGKLTDAQKSM+DDRFKWK ++MEK++EGKPGEARAALRRSVR
Sbjct: 1354 NTMATGYQILGADIWKYVGKLTDAQKSMIDDRFKWKAKDMEKRREGKPGEARAALRRSVR 1413
Query: 663 ENGSDIAEQSGDVSQSVSGPTLMRRNYGHSELHVERSIMPRALASVSGPTDWNEALDIIS 722
++G ++AEQSGD+SQ+V GP R++YG SE +ER+ +PR +A V+GPTDWNEALDII
Sbjct: 1414 DSGPEVAEQSGDISQTVPGPLFPRQSYGISEQMLERTPVPRTIAGVNGPTDWNEALDIIM 1473
Query: 723 FGSPEQSVEGMKVVCHELAQATNDPEGSVMDELVKDADRLVSCLANKVAKTFDFSLTGAS 782
FGSPEQSVEGMKVVCHELAQA+NDPE S +DELVKDAD LVSCLANKVAKTFD SL GAS
Sbjct: 1474 FGSPEQSVEGMKVVCHELAQASNDPEESAIDELVKDADGLVSCLANKVAKTFDVSLMGAS 1533
Query: 783 SRSCKYVLNTLMQTFQNKRLAYAVQESTLDSLITELLLWLLDERVPHMDDGSQLLKALNV 842
SRSCKYVLNTLMQTFQNK+LA+AV+E TL+SLITELLLWLLDERVP M+DGSQLLKALNV
Sbjct: 1534 SRSCKYVLNTLMQTFQNKKLAHAVKEGTLESLITELLLWLLDERVPRMEDGSQLLKALNV 1593
Query: 843 LMLKILDNADRTSSFVVLINLLRPLDPSRWPSPASNESFAARNQRFSDLVVKCLIKLTKV 902
LMLKILDNADRTSSFVVLI+LLRPLDPSRWPSPA+ E +A RNQ+FSDLVVKCLIKLTK+
Sbjct: 1594 LMLKILDNADRTSSFVVLISLLRPLDPSRWPSPATAEVYAVRNQKFSDLVVKCLIKLTKL 1653
Query: 903 LQSTIYDVDLDRILQSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKG 962
LQSTIY+VDLDR+LQSIHVYLQ+LGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKG
Sbjct: 1654 LQSTIYEVDLDRLLQSIHVYLQDLGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKG 1713
Query: 963 HLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPGGQTHWGDSAANNPTSATNSADA 1022
HLS+VPIDM+PQPIILAYIDLNLETLAAARMLT+TGP GQTHW DS ANNP+ NSAD
Sbjct: 1714 HLSLVPIDMRPQPIILAYIDLNLETLAAARMLTATGPVGQTHWTDSTANNPSPPANSADV 1773
Query: 1023 QLKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGLAQM 1082
QLKQEL AIFKKIGDKQT TIGLY+LY IT+ YPKVDIF+QLQNASEAFRTYIRDGLAQ+
Sbjct: 1774 QLKQELGAIFKKIGDKQTSTIGLYDLYHITKSYPKVDIFSQLQNASEAFRTYIRDGLAQV 1833
Query: 1083 EKNAAAGRTPSSVPMATPPPAALGVSSPEFAPLSPVHTNSMNDAKSMNVKSEPTNFNLPP 1142
EKNAAAGRTPSS+P++TPPP++L + SP+ LS + + MN +S+
Sbjct: 1834 EKNAAAGRTPSSLPLSTPPPSSLALPSPDIPSLSSLDVKPL-----MNPRSD-------- 1880
Query: 1143 SYTEDNRIGGAIASKVLPPENPLSDQRNERFGVTSGTLDAIRERMKSMQLAAAAGNPDPG 1202
YT+D R AS + P GV +GTLDAIRERMK+MQLA++ +P
Sbjct: 1881 LYTDDIR-----ASNMNP-------------GVMTGTLDAIRERMKNMQLASS----EPV 1918
Query: 1203 NRPLINMNDNVNNGLSSQSRSSDRASVEN-PAQGSVLPMDEKALSGLQARMERLKSGTIE 1261
++PL+ NDN++ ++ QS + E VLPMDEKALSGLQARMERLK G++E
Sbjct: 1919 SKPLMPTNDNLS--MNQQSVPPSQMGQETVHTHPVVLPMDEKALSGLQARMERLKGGSLE 1976
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Microtubule-binding protein that is essential for cortical microtubules organization and function. Essential for maintaining the interphase cortical array and for correct morphogenesis. Promotes rapid growth and shrinkage of microtubules and suppresses the pausing of interphase microtubules. Regulates the structure and function of microtubule arrays during mitosis and cytokinesis. Probably not required for cellulose microfibrils alignment in roots. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5N749|MOR1_ORYSJ Protein MOR1 OS=Oryza sativa subsp. japonica GN=MOR1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q14008|CKAP5_HUMAN Cytoskeleton-associated protein 5 OS=Homo sapiens GN=CKAP5 PE=1 SV=3 | Back alignment and function description |
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| >sp|A2AGT5|CKAP5_MOUSE Cytoskeleton-associated protein 5 OS=Mus musculus GN=Ckap5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q1ZXQ8|MTAA_DICDI Centrosomal protein 224 OS=Dictyostelium discoideum GN=mtaA PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1263 | ||||||
| 255587410 | 1992 | microtubule associated protein xmap215, | 0.991 | 0.628 | 0.839 | 0.0 | |
| 224061471 | 2036 | microtubule organization protein [Populu | 0.991 | 0.614 | 0.823 | 0.0 | |
| 224115548 | 2025 | microtubule organization protein [Populu | 0.988 | 0.616 | 0.820 | 0.0 | |
| 356533943 | 2035 | PREDICTED: protein MOR1-like [Glycine ma | 0.972 | 0.603 | 0.809 | 0.0 | |
| 356574625 | 2035 | PREDICTED: protein MOR1-like [Glycine ma | 0.972 | 0.603 | 0.808 | 0.0 | |
| 449434204 | 2005 | PREDICTED: protein MOR1-like [Cucumis sa | 0.965 | 0.608 | 0.793 | 0.0 | |
| 19912731 | 2029 | microtubule bundling polypeptide TMBP200 | 0.988 | 0.615 | 0.756 | 0.0 | |
| 297823359 | 1980 | hypothetical protein ARALYDRAFT_482523 [ | 0.956 | 0.610 | 0.733 | 0.0 | |
| 20197534 | 1611 | similar to ch-TOG protein from Homo sapi | 0.955 | 0.749 | 0.726 | 0.0 | |
| 30686489 | 1978 | microtubule organization 1 protein [Arab | 0.955 | 0.610 | 0.726 | 0.0 |
| >gi|255587410|ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis] gi|223525620|gb|EEF28119.1| microtubule associated protein xmap215, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2172 bits (5629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1064/1267 (83%), Positives = 1148/1267 (90%), Gaps = 15/1267 (1%)
Query: 9 LCINLLVQVTTHFMWNSTSGLVSSLRFLRLFYFADIKGFLADVKPALLSALDAEYEKNPF 68
C ++ +Q + N+T L+ +L + DIKGFL+DVKPALLSALDAEY+KNPF
Sbjct: 729 FCKDIGLQSSVAASRNATIKLLGALH---KYVGPDIKGFLSDVKPALLSALDAEYDKNPF 785
Query: 69 EG-TVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAV 127
EG + PKKTVRASES SSVS+GG D LPRED+SGK TPTL+KS+ESPDWKVRLESIEAV
Sbjct: 786 EGASAAPKKTVRASESMSSVSAGGLDSLPREDVSGKVTPTLLKSMESPDWKVRLESIEAV 845
Query: 128 NKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGV 187
NKI+EEANKRIQP GTGELFG LRGRLYDSNKNLVMATL T+G VASAMGPAVEKSSKG+
Sbjct: 846 NKIIEEANKRIQPTGTGELFGALRGRLYDSNKNLVMATLTTIGGVASAMGPAVEKSSKGI 905
Query: 188 LSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWL 247
L+DILKCLGDNKKHMREC LT +D+WLAAVHLDKM+PY+ TAL DAKLGAEGRKDLFDWL
Sbjct: 906 LADILKCLGDNKKHMRECALTTIDSWLAAVHLDKMIPYIATALIDAKLGAEGRKDLFDWL 965
Query: 248 SKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQG 307
S+QL+GLS F DA HLLKPA AMTDKSSDVRKAAEACI E+LR GQET+EKNLKD+ G
Sbjct: 966 SRQLSGLSDFSDAVHLLKPAGSAMTDKSSDVRKAAEACITEVLRVSGQETVEKNLKDLHG 1025
Query: 308 PALALILERIKLNGASQ--------VSMGPTSKSSSKVPKSASNGVSKHGNRAISSRVIP 359
PALAL+LER+K GA Q +SMGPTSK+++KV KSA+NGV KH NR SSR IP
Sbjct: 1026 PALALVLERVKPYGAFQESFDSAKTISMGPTSKTNAKVGKSATNGVPKHANRITSSRAIP 1085
Query: 360 TKGARPESIMSVQDFAVQSQALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMK 419
TKG+R E +MSVQD AVQSQALLNVKDSNKEDRERMVVRRFKFE+ RIEQIQ+LENDMMK
Sbjct: 1086 TKGSRSEPMMSVQDRAVQSQALLNVKDSNKEDRERMVVRRFKFEELRIEQIQDLENDMMK 1145
Query: 420 YFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLL 479
YFREDLHRRLLS DFKKQVDGLEMLQKALPSI K++IEVLDILLRWFVLQFCKSNTTCLL
Sbjct: 1146 YFREDLHRRLLSADFKKQVDGLEMLQKALPSIAKELIEVLDILLRWFVLQFCKSNTTCLL 1205
Query: 480 KVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSA 539
KVLEFLPELFD LRDE Y+LTESEAA+FLPCL+EK GHNIEKVREKMRELTKQIV+ YSA
Sbjct: 1206 KVLEFLPELFDMLRDEAYTLTESEAAIFLPCLIEKLGHNIEKVREKMRELTKQIVHAYSA 1265
Query: 540 TKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSLQIVASLTAERDGEIRK 599
+KT PYILEGLRSKNNRTRIE DLVGFLIDHH AEISGQLKSLQIVASLTAERDGE RK
Sbjct: 1266 SKTFPYILEGLRSKNNRTRIESADLVGFLIDHHVAEISGQLKSLQIVASLTAERDGETRK 1325
Query: 600 AALNTLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKVREMEKKKEGKPGEARAALRR 659
AALNTLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKVREMEK+KEG+PG++RAALRR
Sbjct: 1326 AALNTLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKVREMEKRKEGRPGDSRAALRR 1385
Query: 660 SVRENGSDIAEQSGDVSQSVSGPTLMRRNYGHSELHVERSIMPRALASVSGPTDWNEALD 719
SVRENG D+AEQSG+VSQSVSGPT +R+NY ELH++R IMP A+ SVSGPTDWNEALD
Sbjct: 1386 SVRENGFDLAEQSGEVSQSVSGPTFLRKNYSPHELHMDRQIMPHAVTSVSGPTDWNEALD 1445
Query: 720 IISFGSPEQSVEGMKVVCHELAQATNDPEGSVMDELVKDADRLVSCLANKVAKTFDFSLT 779
IISFGSPEQSVEGMKVVCHELAQAT DPEGS MDELVKDADRLVSCLA+KVAKTFDFSLT
Sbjct: 1446 IISFGSPEQSVEGMKVVCHELAQATGDPEGSAMDELVKDADRLVSCLASKVAKTFDFSLT 1505
Query: 780 GASSRSCKYVLNTLMQTFQNKRLAYAVQESTLDSLITELLLWLLDERVPHMDDGSQLLKA 839
GASSRSCKYVLNTLMQTFQNKRLA+AV+ESTLDSLITELLLWLLDERVPHMDDGSQLLKA
Sbjct: 1506 GASSRSCKYVLNTLMQTFQNKRLAHAVKESTLDSLITELLLWLLDERVPHMDDGSQLLKA 1565
Query: 840 LNVLMLKILDNADRTSSFVVLINLLRPLDPSRWPSPASNESFAARNQRFSDLVVKCLIKL 899
LNVLMLKILDNADRTSSFVVLINLLRP+DPSRWPS AS+E+FA RNQ+FSDLVVKCLIKL
Sbjct: 1566 LNVLMLKILDNADRTSSFVVLINLLRPVDPSRWPSSASSETFAIRNQKFSDLVVKCLIKL 1625
Query: 900 TKVLQSTIYDVDLDRILQSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAA 959
TKVLQSTIYDVDLDRILQSIH+YLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAA
Sbjct: 1626 TKVLQSTIYDVDLDRILQSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAA 1685
Query: 960 IKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPGGQTHWGDSAANNPTSATNS 1019
IKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGP GQTHWGDSAANNP+SAT+S
Sbjct: 1686 IKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPVGQTHWGDSAANNPSSATHS 1745
Query: 1020 ADAQLKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGL 1079
ADAQLKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGL
Sbjct: 1746 ADAQLKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGL 1805
Query: 1080 AQMEKNAAAGRTPSSVPMATPPPAALGVSSPEFAPLSPVHTNSMNDAKSMNVKSEPTNFN 1139
AQMEKNAAAGRTPSS+PM+TPPP+AL SSPE+APLSPVHTNS+NDAKSMN KSEP NF+
Sbjct: 1806 AQMEKNAAAGRTPSSLPMSTPPPSALTASSPEYAPLSPVHTNSINDAKSMNTKSEPANFH 1865
Query: 1140 LPPSYTEDNRIGGAIASKVLPPENPLSDQRNERF--GVTSGTLDAIRERMKSMQLAAAAG 1197
LPP+Y+EDNR I S+ L EN L+DQRNE+F GVT+GTLDAIRERMKSMQLAAAAG
Sbjct: 1866 LPPAYSEDNRTVNTITSRGLISENSLADQRNEKFLSGVTTGTLDAIRERMKSMQLAAAAG 1925
Query: 1198 NPDPGNRPLINMNDNVNNGLSSQ-SRSSDRASVENPAQGSVLPMDEKALSGLQARMERLK 1256
NPD GNRPL +NDN++NGLS Q R+ D ENP QG VLPMDEKALSGLQARMERLK
Sbjct: 1926 NPDSGNRPLTIVNDNLSNGLSGQVPRAPDSVGFENPVQGGVLPMDEKALSGLQARMERLK 1985
Query: 1257 SGTIEPL 1263
SG I+ L
Sbjct: 1986 SGAIDSL 1992
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224061471|ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa] gi|222847754|gb|EEE85301.1| microtubule organization protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224115548|ref|XP_002317062.1| microtubule organization protein [Populus trichocarpa] gi|222860127|gb|EEE97674.1| microtubule organization protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356533943|ref|XP_003535517.1| PREDICTED: protein MOR1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356574625|ref|XP_003555446.1| PREDICTED: protein MOR1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449434204|ref|XP_004134886.1| PREDICTED: protein MOR1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|19912731|dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|297823359|ref|XP_002879562.1| hypothetical protein ARALYDRAFT_482523 [Arabidopsis lyrata subsp. lyrata] gi|297325401|gb|EFH55821.1| hypothetical protein ARALYDRAFT_482523 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|20197534|gb|AAD15450.2| similar to ch-TOG protein from Homo sapiens [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30686489|ref|NP_565811.2| microtubule organization 1 protein [Arabidopsis thaliana] gi|75250086|sp|Q94FN2.1|MOR1_ARATH RecName: Full=Protein MOR1; AltName: Full=Protein GEM1; AltName: Full=Protein GEMINI POLLEN 1; AltName: Full=Protein MICROTUBULE ORGANIZATION 1; AltName: Full=Protein RID5; AltName: Full=Protein ROOT INITIATION DEFECTIVE 5 gi|14317953|gb|AAK59871.1|AF367246_1 microtubule organization 1 protein [Arabidopsis thaliana] gi|22252950|gb|AAM94170.1| MOR1/GEM1 [Arabidopsis thaliana] gi|330254039|gb|AEC09133.1| microtubule organization 1 protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1263 | ||||||
| TAIR|locus:2058739 | 1978 | MOR1 "MICROTUBULE ORGANIZATION | 0.878 | 0.561 | 0.721 | 0.0 | |
| UNIPROTKB|E1B7K5 | 2032 | CKAP5 "Uncharacterized protein | 0.224 | 0.139 | 0.317 | 3.6e-84 | |
| UNIPROTKB|E2RSW0 | 2033 | CKAP5 "Uncharacterized protein | 0.224 | 0.139 | 0.313 | 3.7e-84 | |
| UNIPROTKB|F1M949 | 1778 | Ckap5 "Protein Ckap5" [Rattus | 0.224 | 0.159 | 0.324 | 1.1e-83 | |
| UNIPROTKB|Q14008 | 2032 | CKAP5 "Cytoskeleton-associated | 0.224 | 0.139 | 0.317 | 4.1e-83 | |
| UNIPROTKB|F1SIB5 | 1517 | F1SIB5 "Uncharacterized protei | 0.200 | 0.166 | 0.328 | 1.2e-82 | |
| MGI|MGI:1923036 | 2032 | Ckap5 "cytoskeleton associated | 0.224 | 0.139 | 0.320 | 1.2e-81 | |
| UNIPROTKB|F1P0Y0 | 2036 | CKAP5 "Uncharacterized protein | 0.243 | 0.150 | 0.296 | 7.4e-81 | |
| ZFIN|ZDB-GENE-051120-174 | 2033 | ckap5 "cytoskeleton associated | 0.296 | 0.184 | 0.268 | 1.2e-76 | |
| FB|FBgn0027948 | 2050 | msps "mini spindles" [Drosophi | 0.425 | 0.261 | 0.291 | 2.4e-67 |
| TAIR|locus:2058739 MOR1 "MICROTUBULE ORGANIZATION 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4076 (1439.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 812/1125 (72%), Positives = 911/1125 (80%)
Query: 10 CINLLVQVTTHFMWNSTSGLVSSLRFLRLFYFADIKGFLADVKPALLSALDAEYEKNPFE 69
C ++ +Q +T N+T L+ +L F DIKGFL DVKPALLSALD EYEKNPFE
Sbjct: 764 CKDVGLQSSTAATRNATIKLLGALH---KFVGPDIKGFLNDVKPALLSALDTEYEKNPFE 820
Query: 70 GTVVPKKTVRAXXXXXXXXXXXXXXLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNK 129
GT PK+ V+ LPREDIS K TP L+K ESPDWK+RLESIEAVNK
Sbjct: 821 GTAAPKRVVKTSVSTSTSSGGLDS-LPREDISTKITPNLLKGFESPDWKMRLESIEAVNK 879
Query: 130 ILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLS 189
ILEEANKRIQP GTGELFGGLRGRL DSNKNLVM TL T+G VA+AMGPAVEK+SKG+LS
Sbjct: 880 ILEEANKRIQPTGTGELFGGLRGRLLDSNKNLVMQTLTTIGGVAAAMGPAVEKASKGILS 939
Query: 190 DILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSK 249
D+LKCLGDNKKHMRECTL LD WL AVHLDKM+PY+ ALTD K+GAEGRKDLFDWL+K
Sbjct: 940 DVLKCLGDNKKHMRECTLAALDLWLGAVHLDKMIPYIIIALTDGKMGAEGRKDLFDWLTK 999
Query: 250 QLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPA 309
QLTGLS F DA HLLKPAS AMTDKS+DVRKAAE CI EILR GQE IEKNLKDIQGPA
Sbjct: 1000 QLTGLSDFVDAIHLLKPASTAMTDKSADVRKAAEGCISEILRVSGQEMIEKNLKDIQGPA 1059
Query: 310 LALILERIKLN------GASQVSMGPTXXXXXXXXXXXXNGVSKHGNRAISSRVIPTKGA 363
LAL+LE+++ +S+ GP NG K GNR SR +PTKG+
Sbjct: 1060 LALVLEKVRPGFVQEPFESSKAMAGPVSKGVTKISKSTSNGTLKQGNR---SRAVPTKGS 1116
Query: 364 RPESIMSVQDFAVQSQALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFRE 423
I SV D A+QSQALLN KDSNKEDRER+VVRR KFE+ R EQIQ+LENDMMK+FRE
Sbjct: 1117 --SQITSVHDIAIQSQALLNTKDSNKEDRERVVVRRIKFEELRPEQIQDLENDMMKFFRE 1174
Query: 424 DLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVLE 483
DL +RLLS DFKKQVDGLE+LQKALPS+ K+IIEVLD+LLRWFVLQFCKSNTTCLLKVLE
Sbjct: 1175 DLQKRLLSPDFKKQVDGLEILQKALPSVSKEIIEVLDVLLRWFVLQFCKSNTTCLLKVLE 1234
Query: 484 FLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSATKTL 543
FLPELF+TLRDE Y +TE+EAA+FLPCL EK GHNIEKVREKMREL KQI+ YS KT
Sbjct: 1235 FLPELFNTLRDEEYCMTEAEAAIFLPCLAEKLGHNIEKVREKMRELMKQIIQAYSVGKTY 1294
Query: 544 PYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSLQIVASLTAERDGEIRKAALN 603
PYILEGLRSKNNRTRIEC DL+G+L++ G EI G LK L IVASLTAERDGE+RKAALN
Sbjct: 1295 PYILEGLRSKNNRTRIECTDLIGYLLETCGTEIGGLLKYLNIVASLTAERDGELRKAALN 1354
Query: 604 TLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKVRXXXXXXXXXXXXARAALRRSVRE 663
T+ATGY+ILG DIW+YVGKLTDAQKSM+DDRFKWK + ARAALRRSVR+
Sbjct: 1355 TMATGYQILGADIWKYVGKLTDAQKSMIDDRFKWKAKDMEKRREGKPGEARAALRRSVRD 1414
Query: 664 NGSDIAEQSGDVSQSVSGPTLMRRNYGHSELHVERSIMPRALASVSGPTDWNEALDIISF 723
+G ++AEQSGD+SQ+V GP R++YG SE +ER+ +PR +A V+GPTDWNEALDII F
Sbjct: 1415 SGPEVAEQSGDISQTVPGPLFPRQSYGISEQMLERTPVPRTIAGVNGPTDWNEALDIIMF 1474
Query: 724 GSPEQSVEGMKVVCHELAQATNDPEGSVMDELVKDADRLVSCLANKVAKTFDFSLTGASS 783
GSPEQSVEGMKVVCHELAQA+NDPE S +DELVKDAD LVSCLANKVAKTFD SL GASS
Sbjct: 1475 GSPEQSVEGMKVVCHELAQASNDPEESAIDELVKDADGLVSCLANKVAKTFDVSLMGASS 1534
Query: 784 RSCKYVLNTLMQTFQNKRLAYAVQXXXXXXXXXXXXXXXXXERVPHMDDGSQLLKALNVL 843
RSCKYVLNTLMQTFQNK+LA+AV+ ERVP M+DGSQLLKALNVL
Sbjct: 1535 RSCKYVLNTLMQTFQNKKLAHAVKEGTLESLITELLLWLLDERVPRMEDGSQLLKALNVL 1594
Query: 844 MLKILDNADRTSSFVVLINLLRPLDPSRWPSPASNESFAARNQRFSDLVVKCLIKLTKVL 903
MLKILDNADRTSSFVVLI+LLRPLDPSRWPSPA+ E +A RNQ+FSDLVVKCLIKLTK+L
Sbjct: 1595 MLKILDNADRTSSFVVLISLLRPLDPSRWPSPATAEVYAVRNQKFSDLVVKCLIKLTKLL 1654
Query: 904 QSTIYDVDLDRILQSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKGH 963
QSTIY+VDLDR+LQSIHVYLQ+LGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKGH
Sbjct: 1655 QSTIYEVDLDRLLQSIHVYLQDLGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIKGH 1714
Query: 964 LSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPGGQTHWGXXXXXXXXXXXXXXXXQ 1023
LS+VPIDM+PQPIILAYIDLNLETLAAARMLT+TGP GQTHW Q
Sbjct: 1715 LSLVPIDMRPQPIILAYIDLNLETLAAARMLTATGPVGQTHWTDSTANNPSPPANSADVQ 1774
Query: 1024 LKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGLAQME 1083
LKQEL AIFKKIGDKQT TIGLY+LY IT+ YPKVDIF+QLQNASEAFRTYIRDGLAQ+E
Sbjct: 1775 LKQELGAIFKKIGDKQTSTIGLYDLYHITKSYPKVDIFSQLQNASEAFRTYIRDGLAQVE 1834
Query: 1084 KNAAAGRTPSSVPMATPPPAALGVSSPEFAPLSPVHTNSMNDAKS 1128
KNAAAGRTPSS+P++TPPP++L + SP+ LS + + + +S
Sbjct: 1835 KNAAAGRTPSSLPLSTPPPSSLALPSPDIPSLSSLDVKPLMNPRS 1879
|
|
| UNIPROTKB|E1B7K5 CKAP5 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RSW0 CKAP5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M949 Ckap5 "Protein Ckap5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q14008 CKAP5 "Cytoskeleton-associated protein 5" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SIB5 F1SIB5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1923036 Ckap5 "cytoskeleton associated protein 5" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P0Y0 CKAP5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-051120-174 ckap5 "cytoskeleton associated protein 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0027948 msps "mini spindles" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5N749 | MOR1_ORYSJ | No assigned EC number | 0.6748 | 0.9675 | 0.6119 | yes | no |
| Q94FN2 | MOR1_ARATH | No assigned EC number | 0.7269 | 0.9556 | 0.6102 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1263 | |||
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 100.0 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 100.0 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 99.79 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 99.78 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.15 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 99.15 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 99.0 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.85 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 98.8 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 98.78 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 98.76 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.5 | |
| KOG2933 | 334 | consensus Uncharacterized conserved protein [Funct | 98.48 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 98.45 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 98.45 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.31 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.22 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 98.19 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.17 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.15 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.08 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 98.07 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.05 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 97.95 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 97.94 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.92 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.89 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 97.7 | |
| KOG2933 | 334 | consensus Uncharacterized conserved protein [Funct | 97.58 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 97.57 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 97.53 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.46 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.36 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.24 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 97.04 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 96.61 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 96.52 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 96.48 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 96.45 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 96.42 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.28 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 96.14 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 95.75 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.71 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 95.64 | |
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 95.55 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 95.5 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 95.49 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 95.43 | |
| cd03568 | 144 | VHS_STAM VHS domain family, STAM subfamily; member | 95.32 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 95.27 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 95.26 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 95.18 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 95.16 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 95.09 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 95.05 | |
| cd03567 | 139 | VHS_GGA VHS domain family, GGA subfamily; GGA (Gol | 94.98 | |
| PF10274 | 183 | ParcG: Parkin co-regulated protein; InterPro: IPR0 | 94.89 | |
| cd00197 | 115 | VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamil | 94.61 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 94.37 | |
| PF00790 | 140 | VHS: VHS domain; InterPro: IPR002014 The VHS domai | 94.36 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 94.19 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 94.16 | |
| PF04118 | 307 | Dopey_N: Dopey, N-terminal; InterPro: IPR007249 Do | 93.99 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 93.85 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 93.76 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 93.47 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 93.43 | |
| smart00288 | 133 | VHS Domain present in VPS-27, Hrs and STAM. Unpubl | 93.35 | |
| cd03561 | 133 | VHS VHS domain family; The VHS domain is present i | 93.27 | |
| cd03569 | 142 | VHS_Hrs_Vps27p VHS domain family, Hrs and Vps27p s | 93.1 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 92.94 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 92.85 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 92.69 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 92.68 | |
| KOG4524 | 1014 | consensus Uncharacterized conserved protein [Funct | 92.56 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 92.55 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 92.5 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 92.36 | |
| KOG1087 | 470 | consensus Cytosolic sorting protein GGA2/TOM1 [Int | 92.35 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 92.3 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 92.25 | |
| PF04118 | 307 | Dopey_N: Dopey, N-terminal; InterPro: IPR007249 Do | 91.95 | |
| cd03565 | 141 | VHS_Tom1 VHS domain family, Tom1 subfamily; The VH | 91.95 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 91.49 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 91.21 | |
| KOG0392 | 1549 | consensus SNF2 family DNA-dependent ATPase domain- | 90.8 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 90.76 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 90.59 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 89.84 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 89.81 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 89.27 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 88.8 | |
| cd03572 | 122 | ENTH_epsin_related ENTH domain, Epsin Related fami | 88.65 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 88.61 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 88.28 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 88.11 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 88.09 | |
| PF13001 | 501 | Ecm29: Proteasome stabiliser; InterPro: IPR024372 | 88.02 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 87.12 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 87.01 | |
| PF10274 | 183 | ParcG: Parkin co-regulated protein; InterPro: IPR0 | 84.9 | |
| KOG2149 | 393 | consensus Uncharacterized conserved protein [Funct | 84.89 | |
| PF11640 | 155 | TAN: Telomere-length maintenance and DNA damage re | 84.36 | |
| PF12231 | 372 | Rif1_N: Rap1-interacting factor 1 N terminal; Inte | 83.93 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 83.67 | |
| cd03567 | 139 | VHS_GGA VHS domain family, GGA subfamily; GGA (Gol | 83.65 | |
| cd03568 | 144 | VHS_STAM VHS domain family, STAM subfamily; member | 83.38 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 83.13 | |
| KOG0803 | 1312 | consensus Predicted E3 ubiquitin ligase [Posttrans | 82.66 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 82.49 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 82.45 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 82.2 | |
| KOG2199 | 462 | consensus Signal transducing adaptor protein STAM/ | 81.96 | |
| KOG2011 | 1048 | consensus Sister chromatid cohesion complex Cohesi | 81.92 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 81.57 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 81.41 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 81.24 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 80.83 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 80.82 |
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-51 Score=505.51 Aligned_cols=626 Identities=26% Similarity=0.280 Sum_probs=485.4
Q ss_pred cchhHHHHHHHHHHHHh---------------hhChhhHHHHHHHHHHHHHHhhHHHHhhhc-cCCHHHHHHHHHHHhcC
Q 000834 3 QLSFWVLCINLLVQVTT---------------HFMWNSTSGLVSSLRFLRLFYFADIKGFLA-DVKPALLSALDAEYEKN 66 (1263)
Q Consensus 3 ~~~~~~~~~~~l~k~~~---------------h~d~~VR~~ai~Ll~~ly~~iG~~l~~~l~-dlkp~~l~~Le~efeK~ 66 (1263)
|.+|.+.|+..|..-|+ -+|+|||.++.++++++|+|.|...+.++. .--+.++.++...+.+.
T Consensus 114 ~~~~~~~~~~~lv~~~g~p~~~~~~~~~~~~~l~D~nvr~~~~~l~v~i~r~~G~~~~~~~~~~~~~~l~~~~~~~~~~~ 193 (815)
T KOG1820|consen 114 KIAAAVAAVLSLVEEFGKPKVPSKAFIKHVGSLADKNVRSEASKLLVEIYRWTGDASKPLLFKASAPGLMGKLGSYQGKS 193 (815)
T ss_pred hHHHHHHHHHHHHHHhcCCCCccccccccCccccccccchhhcccchhhhhhcCCCcCcccchhhhHHHHHHHHhhcccc
Confidence 45677888877544332 359999999999999999999999888874 44455566665555544
Q ss_pred CCCCCCCCcccccc--ccc------------cc--------cCC-CCCCCCCCccccccCCCHHHHHhcCCCChhHHHHH
Q 000834 67 PFEGTVVPKKTVRA--SES------------TS--------SVS-SGGSDGLPREDISGKFTPTLVKSLESPDWKVRLES 123 (1263)
Q Consensus 67 ~~~~~p~p~R~~r~--~~~------------~~--------~~~-~~~~dllprvDI~~kl~~~ll~~l~dk~WK~RkEa 123 (1263)
...-.-.+.+...+ +.. .. .+. .+..|++||+||++++++.|...|.|++||+|+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~s~~d~~d~l~~~di~~ki~~~l~t~~~s~~WK~R~Ea 273 (815)
T KOG1820|consen 194 MMSFFNEKRPLLKSQPQDESDPNVKEQLEKPERGLQRSKSGFTSPIDNFDLLPRVDILSKITKNLETEMLSKKWKDRKEA 273 (815)
T ss_pred ccccccccccccccccccccCCChhhcccccccccccccCCCCCCccccccCchhhhhhhcChHHHHhhhccchHHHHHH
Confidence 32100001110000 000 00 011 25678999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCchhHHHHHHhhhccccHHHHHHHHHHHHHHHHhcCchhhhhhhchHHHHHHHhCCCcHHHH
Q 000834 124 IEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMR 203 (1263)
Q Consensus 124 Le~L~~il~~a~~~i~p~~~~eL~~aLk~rL~DsN~~V~~~AL~~l~~LA~alg~~f~~~~~~llp~lL~kl~DkK~~VR 203 (1263)
|+.+.++++++...++.+.++.+...++.+..|+|++|+..|+.+|..||.+||..|.+|+..++|.+|+++||+|+.+|
T Consensus 274 le~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v~p~lld~lkekk~~l~ 353 (815)
T KOG1820|consen 274 LEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNVFPSLLDRLKEKKSELR 353 (815)
T ss_pred HHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhhcchHHHHhhhccHHHH
Confidence 99999999864323555545777788888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHhhccCChhHHHHHHHHHHHHHccCCCC----CchhhhHHHHHhhhcCCCHHHH
Q 000834 204 ECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF----PDAAHLLKPASIAMTDKSSDVR 279 (1263)
Q Consensus 204 ~aa~~aL~a~~~~~~l~~ll~~l~~~L~~kk~~p~vR~e~L~~L~~~l~~~~~~----~~~~~ll~pl~~~L~D~~~eVR 279 (1263)
+++.+|+|+|+++++++.+.+.|..++.++ +|+.|.+++.|+.+++...++. .....+++.+++..+|++++||
T Consensus 354 d~l~~~~d~~~ns~~l~~~~~~I~e~lk~k--np~~k~~~~~~l~r~~~~~~~~~~~~~t~~~l~p~~~~~~~D~~~~VR 431 (815)
T KOG1820|consen 354 DALLKALDAILNSTPLSKMSEAILEALKGK--NPQIKGECLLLLDRKLRKLGPKTVEKETVKTLVPHLIKHINDTDKDVR 431 (815)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHhcCC--ChhhHHHHHHHHHHHHhhcCCcCcchhhHHHHhHHHhhhccCCcHHHH
Confidence 999999999999999999999999999998 5999999999999999988742 2345566668888999999999
Q ss_pred HHHHHHHHHHHHhcChhhhhhhhhcCChhHHHHHHHHhhhcCCCccCCCCCCCCCCC-CCCC-------CCCCCCCCCCC
Q 000834 280 KAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKLNGASQVSMGPTSKSSSK-VPKS-------ASNGVSKHGNR 351 (1263)
Q Consensus 280 ~aA~~~L~~l~~~vG~~~i~~~l~~L~~~~~~~ilek~~~~~~~k~s~~p~sk~~sk-~~~~-------~s~~~~k~~~~ 351 (1263)
+||.++++++|+++|++.+.+++.++++..+..+.|++++........++++++..+ .++. ..+....++.
T Consensus 432 ~Aa~e~~~~v~k~~Ge~~~~k~L~~~~~~~~~~~~E~~~p~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~~- 510 (815)
T KOG1820|consen 432 KAALEAVAAVMKVHGEEVFKKLLKDLDKQDIKPKEEKLKPLLHFLAAPKEKSSAPDPQVEKLKKVVKVGLSNFSGLPKN- 510 (815)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhhccchhhhhhhhccccccccccCCCcCCCCCccccccceecccccccCCCCCCC-
Confidence 999999999999999999999999999877778889888632211111111111110 0000 0011111110
Q ss_pred CCccCCCCCCCCCCCccccchhhhhhhhhhh--cccCCchhHHhhhhhcccccCCCchhHHHHHHHHHHhhhhHHHHhhh
Q 000834 352 AISSRVIPTKGARPESIMSVQDFAVQSQALL--NVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRL 429 (1263)
Q Consensus 352 ~~s~r~~~~~~~~~~~~~s~~~~~~~s~pl~--~~~~~~k~~~~~~~~~kw~f~~p~~e~ve~L~~q~~~~~~~~l~~~L 429 (1263)
++..+|.+.+....+... +.+ ++.+.. ..+.++.....+..+.+|.+..+..+..+ ++...++......|
T Consensus 511 --~~a~vps~~ss~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~r~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 582 (815)
T KOG1820|consen 511 --SAASVPSKLSSANSSRKI-PEA-AEAPKLQLSLKEQRVVLGTRRKVSPKTVVAPVDDKKE----PSKKFVPKSLAKSM 582 (815)
T ss_pred --ccccCCCcccccccccCC-cch-hhccccccccccchhhhhhhhccCccccccchhhhhc----ccccccchhhhhcc
Confidence 011111111111100000 000 111111 01112222233456778988877655444 37778899999999
Q ss_pred cCccHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHhhcCchHHHHHHHHHhHHHHHHHHhhcCCCcchHHHHhHHH
Q 000834 430 LSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLP 509 (1263)
Q Consensus 430 fs~dwk~Rl~ale~L~~~l~~~~~~~~~~lDlllk~l~lrl~DtN~qV~~k~Le~L~~l~~~L~~~~~~lsd~ea~~~lP 509 (1263)
|+.|++.+.++++.+.........+..++.|++++|+..||+|+|+++..+.++++...++.+...++..+..+...+.|
T Consensus 583 ~~~d~~~~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~lr~~~~~~~~~~~~~e~l~~~~~~~~l~~~~~~~~e~~~~~~ 662 (815)
T KOG1820|consen 583 KLDDFKQHTAKLEILQRAEAANSKEYTSIQDLLLEWLVLRFEETNEALLGKVLELLIAEFQTLRLIEAVMALEEKLLFRE 662 (815)
T ss_pred CccchhhhhhhhhhhhhhhcccccccchHHhhhhHHHHHHhhcccHHhhhhhhhhhhhhhhhcchhhhcccHhhhhccch
Confidence 99999999999999999988888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHhcCCcccHHHHHHhhccCChHhHHHHHHHHHHHHHhhcccccCccchHHHHHHh
Q 000834 510 CLVEKSGHNIEKVREKMRELTKQIVNFYSATKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSLQIVASL 589 (1263)
Q Consensus 510 ~LveKlGD~K~~vR~~~~~il~~l~~v~~~skv~~~ll~glksKN~rvR~ecL~~L~~lI~~~G~~v~~~~k~L~~Iak~ 589 (1263)
++..++|..++.+++..+.+......+++.....+++.+++..++.++|.+|+..+..++..-|.........+..++-.
T Consensus 663 i~~~~~~~~~~~~~~~~~ti~~~s~~v~s~~~~~~~~~~~l~~~~~~~r~~~l~~i~~~~~~~g~~~~~~~~~~~~~~~~ 742 (815)
T KOG1820|consen 663 ILDLKNGRRKDTVFQKESTISEASFEVLSVLMMVPSLREALELKEREIRSEELLVIKLLFSSEGTSILKSLRVLNIIALL 742 (815)
T ss_pred hhHHHhhhccchhhhhcchhhhhhhhhccccccchhhHhhccccchhhHHHHhhhhheeeccCCcchhhhHhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999988877775533233445677888
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHCHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 000834 590 TAERDGEIRKAALNTLATGYKILGEDIWRYVGKLTDAQKSMLDDRFKWKV 639 (1263)
Q Consensus 590 i~D~d~~VR~AAl~~l~~ly~~~G~~l~~~l~~L~~~~~~~Leer~kr~~ 639 (1263)
..+.++.+|.++.++++..|.+.|+.+|+..+...+.++++++.+|++..
T Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 792 (815)
T KOG1820|consen 743 VKASDGKSSSKVKKTSWKPFDFLPDPSWKISILQADTDKSRIEKMFPKER 792 (815)
T ss_pred ccccchhhhhhhhcccccccccccchHHHHHHHhhHHHhhhHHHhcCccc
Confidence 89999999999999999999999999999999999999999999997543
|
|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2933 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2933 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd03568 VHS_STAM VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein) | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >cd03567 VHS_GGA VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins | Back alignment and domain information |
|---|
| >PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter | Back alignment and domain information |
|---|
| >cd00197 VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00790 VHS: VHS domain; InterPro: IPR002014 The VHS domain is a ~140 residues long domain, whose name is derived from its occurrence in VPS-27, Hrs and STAM | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans) | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >smart00288 VHS Domain present in VPS-27, Hrs and STAM | Back alignment and domain information |
|---|
| >cd03561 VHS VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule) | Back alignment and domain information |
|---|
| >cd03569 VHS_Hrs_Vps27p VHS domain family, Hrs and Vps27p subfamily; composed of Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and its yeast homolog Vps27p (vacuolar protein sorting) | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG4524 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >KOG1087 consensus Cytosolic sorting protein GGA2/TOM1 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans) | Back alignment and domain information |
|---|
| >cd03565 VHS_Tom1 VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0392 consensus SNF2 family DNA-dependent ATPase domain-containing protein [Transcription] | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3 | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter | Back alignment and domain information |
|---|
| >KOG2149 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF11640 TAN: Telomere-length maintenance and DNA damage repair; InterPro: IPR021668 ATM is a large protein kinase, in humans, critical for responding to DNA double-strand breaks (DSBs) | Back alignment and domain information |
|---|
| >PF12231 Rif1_N: Rap1-interacting factor 1 N terminal; InterPro: IPR022031 This domain family is found in eukaryotes, and is typically between 135 and 146 amino acids in length | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03567 VHS_GGA VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins | Back alignment and domain information |
|---|
| >cd03568 VHS_STAM VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein) | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0803 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2199 consensus Signal transducing adaptor protein STAM/STAM2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2011 consensus Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1263 | ||||
| 2of3_A | 266 | Tog Domain Structure From C.Elegans Zyg9 Length = 2 | 3e-26 |
| >pdb|2OF3|A Chain A, Tog Domain Structure From C.Elegans Zyg9 Length = 266 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} Length = 266 | Back alignment and structure |
|---|
Score = 246 bits (629), Expect = 3e-74
Identities = 66/255 (25%), Positives = 134/255 (52%)
Query: 383 NVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLE 442
K ++ +++ + ++ F+ P E I +L+ + + L +L DFK+ + L+
Sbjct: 9 EDKKQRIKEEKQLKLVKWNFQAPTDEHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALD 68
Query: 443 MLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTES 502
L + + + ++ D+LL+W L+F ++N L+KVLE + + +RD +++
Sbjct: 69 SLVRLADTSPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQE 128
Query: 503 EAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSATKTLPYILEGLRSKNNRTRIECV 562
E + F+P L+ K+G + +R +R++ + + K P +L+ L+SKN R R EC+
Sbjct: 129 EVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDALKSKNARQRSECL 188
Query: 563 DLVGFLIDHHGAEISGQLKSLQIVASLTAERDGEIRKAALNTLATGYKILGEDIWRYVGK 622
++ + I + G L + VA ++D +R AA+N L +K G+ +W+ G+
Sbjct: 189 LVIEYYITNAGISPLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMWKAAGR 248
Query: 623 LTDAQKSMLDDRFKW 637
+ D KS++++R K
Sbjct: 249 MADKDKSLVEERIKR 263
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} Length = 266 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Length = 249 | Back alignment and structure |
|---|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Length = 249 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} Length = 278 | Back alignment and structure |
|---|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} Length = 278 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1263 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 9e-12 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-09 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-04 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 4e-06 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 3e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 8e-04 | |
| d1qbkb_ | 888 | a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapi | 0.001 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (163), Expect = 9e-12
Identities = 107/978 (10%), Positives = 275/978 (28%), Gaps = 80/978 (8%)
Query: 108 LVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLI 167
L++ + S D R + + L++ + ++ ++ + L D N + +
Sbjct: 8 LLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVK 67
Query: 168 TLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVL------------DAWLA 215
LG + S + E + ++ + + +K+ +R+ + L + LA
Sbjct: 68 CLGPLVSKVK---EYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALA 124
Query: 216 AVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGF--PDAAHLLKPASIAMTD 273
A K+ +T+A+ + + + D ++ L+ G +L +T
Sbjct: 125 ANVCKKITGRLTSAIAKQE-DVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTS 183
Query: 274 KSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKLNGASQVSMGPTSKS 333
VRK + ++ + G ++ +L + N + + +
Sbjct: 184 PRLAVRKRTIIALGHLVMSCGNIVFVDLIEH--------LLSELSKNDSMSTTRT-YIQC 234
Query: 334 SSKVPKSASNGVSKHGNRAISSRVIPTKGARPESIMSVQDFAVQSQALLNVKDSNKEDRE 393
+ + + A + + ++ + I V +V D ++ + E
Sbjct: 235 IAAISRQAGHRIGEYLEKIIPLVV---------KFCNVDDDELREYCIQAF--------E 277
Query: 394 RMVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRK 453
V R K P + I + + Y + + DG + +
Sbjct: 278 SFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYS 337
Query: 454 DIIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVE 513
D ++ + R +T + EF + L E+ A +
Sbjct: 338 DDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLS 397
Query: 514 KSGHNIEKVREKMRELTKQIVNFYSA------TKTLPYILEGLRSKNNRTRIECVDLVGF 567
+ + + + ++ K+ +TR C +++
Sbjct: 398 LLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTE 457
Query: 568 LI---DHHGAEISGQLKSLQIVASLTAERDGEIRKAALNTLATGYKILGEDIWRYVGKLT 624
L+ + L I + ++ AL+ L ++ +
Sbjct: 458 LVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQAL 517
Query: 625 DAQKSMLDDRFKWKVREMEKKKEGKPGEARAALRRSVRENGSDIAEQSGDVSQSVSGPTL 684
+K+ + + L + + + + +
Sbjct: 518 VPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAAD 577
Query: 685 MRRNYGHSELHVERS---------------IMPRALASVSGPTDWNEAL----DIISFGS 725
+ + + + L + + I
Sbjct: 578 IDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPL 637
Query: 726 PEQSVEGMKVVCHELAQATNDPEGSVMDELVKDADRLVSCLANKVAKTFDFSLTGASSRS 785
+ LA + ++ + D L+ ++ + ++
Sbjct: 638 KIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPL 697
Query: 786 CKYVLNTLMQTFQNKRLAYAVQESTLDSLITELLLWLLDERVPHMDDGSQLLKALNVLML 845
+ Q + A + S I+ +L L V L A+
Sbjct: 698 ISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQ 757
Query: 846 KILDNADRTSSFVVLINLLRPLDPSRWPSPASNESFAARNQRFSDLVVKCLIKLTKVLQS 905
++ ++ L+ +L S+ + +S+ + + + L C + V+
Sbjct: 758 ALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQ 817
Query: 906 TIYDVDLDRILQSIHVYLQELGMEEIRRRAGADDKPLR--MVKTVLHELVKLRGAAIKGH 963
I DV R SI + E + L+ +++ +++ AA
Sbjct: 818 FIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYAL 877
Query: 964 LSMVPIDMKPQ-PIILAYIDLNLETLAAARM-----LTSTGPGGQTHWGDSAANNPTSAT 1017
S+ ++ P +L I + ++S G + ++
Sbjct: 878 GSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHC 937
Query: 1018 NSADAQLKQELAAIFKKI 1035
A+ + +A K+
Sbjct: 938 ECAEEGTRNVVAECLGKL 955
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 888 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1263 | |||
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.88 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.82 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.81 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.73 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.69 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.48 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.46 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.28 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.26 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.17 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.12 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.0 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.77 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.57 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 97.65 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.61 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.58 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 97.54 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 97.13 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.02 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.01 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 96.89 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 96.73 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.33 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.31 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 95.93 | |
| d1ujka_ | 145 | ADP-ribosylation factor binding protein Gga1 {Huma | 93.54 | |
| d1juqa_ | 151 | ADP-ribosylation factor binding protein Gga3 {Huma | 93.52 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 92.38 | |
| d1dvpa1 | 145 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 92.18 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 91.76 | |
| d1mhqa_ | 143 | ADP-ribosylation factor binding protein Gga2 {Huma | 91.14 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 88.56 | |
| d1elka_ | 153 | Tom1 protein {Human (Homo sapiens) [TaxId: 9606]} | 84.4 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 80.91 |
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.1e-17 Score=134.74 Aligned_cols=512 Identities=17% Similarity=0.134 Sum_probs=226.3
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-----HHHHH----CCCCHHHHHHHHHHHHCCCCC-CCCC-CCC
Q ss_conf 799999999871117302999999999999995487-----98622----067999999999998409999-9989-854
Q 000834 8 VLCINLLVQVTTHFMWNSTSGLVSSLRFLRLFYFAD-----IKGFL----ADVKPALLSALDAEYEKNPFE-GTVV-PKK 76 (1263)
Q Consensus 8 ~~~~~~l~~~~~h~d~nVR~~ai~Ll~~ly~~iG~~-----l~~~l----~dlkp~~l~~L~~efeK~~~~-~~p~-P~R 76 (1263)
..+|..|.+-+.|.|..||-.|+.-++.+-.-+|+. |.++| +|.-+.+. .+-+.+.++... +.+. -..
T Consensus 9 ~~~i~~l~~~l~~~~~~~R~~a~~~l~~ia~~lg~~~~~~~lip~l~~~~~~~~ev~~-~~~~~l~~~~~~~~~~~~~~~ 87 (588)
T d1b3ua_ 9 LYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLL-ALAEQLGTFTTLVGGPEYVHC 87 (588)
T ss_dssp SHHHHHHHHHTTCSCHHHHHHHHHTHHHHHHHSCHHHHHHTHHHHHHHTCCCCHHHHH-HHHHHHTTCSGGGTSGGGGGG
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHCCCHHHHHH
T ss_conf 2689999998669998999999999999999849174599999999998658689999-999999999987487468999
Q ss_pred CC------CCCCCC--C-CCC---CCCCCCCCCCCCCCCCCHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 42------122343--4-679---9999998856555678987997317999168-999999999999970567898980
Q 000834 77 TV------RASEST--S-SVS---SGGSDGLPREDISGKFTPTLVKSLESPDWKV-RLESIEAVNKILEEANKRIQPAGT 143 (1263)
Q Consensus 77 ~~------r~~~~~--~-~~~---~~~~d~lprvDI~~kl~~~ll~~l~dk~WK~-RkEaLe~L~~il~~a~~kI~p~~~ 143 (1263)
.. -+..+. . .+. ......+++.++...+.+ ++..+.+.+|-. |..+..-+..+. ++..+...
T Consensus 88 ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~~~~~~~~~l~p-~i~~L~~~~~~~~r~~a~~ll~~~~----~~~~~~~~ 162 (588)
T d1b3ua_ 88 LLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVP-LVKRLAGGDWFTSRTSACGLFSVCY----PRVSSAVK 162 (588)
T ss_dssp GHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHH-HHHHHHTCSSHHHHHHHGGGHHHHT----TTSCHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHH----HHHHHHHH
T ss_conf 999999980699889999999999999986798889999999-9999864631479999999999999----98618999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH---
Q ss_conf 15999998531243299999999999999996191123213304999999919892879999999999999963803---
Q 000834 144 GELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLD--- 220 (1263)
Q Consensus 144 geL~~aLk~rL~DsN~~V~~~AL~~l~~LA~~lg~~f~~~~~~llp~lL~~l~DkK~~VR~aa~~aL~a~~~~~~ld--- 220 (1263)
.++...+...+.|.+..|...++.+++.++..++.+.. ...++|.+...+.|....||.++..++..+....+.+
T Consensus 163 ~~l~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~~~~~--~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~ 240 (588)
T d1b3ua_ 163 AELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNV--KSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLE 240 (588)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHH--HHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHH--HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999999985169989999999999989987157877--9999999999744885246789998887763058889999
Q ss_pred -HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf -2589999997104689568999999999997038999861320799996406999779999999899999825802354
Q 000834 221 -KMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIE 299 (1263)
Q Consensus 221 -~ile~l~~~L~~kk~~p~vR~e~L~wL~~~l~~~~~~~~~~~li~pi~~~L~D~~~dVR~aA~~~L~~l~~~iG~~~i~ 299 (1263)
.+++.+...+.+. +|.+|..+...+.......+.......+++.+...+.|.+.+||..|...+..++..++.....
T Consensus 241 ~~i~~~l~~~~~D~--~~~Vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~ 318 (588)
T d1b3ua_ 241 ALVMPTLRQAAEDK--SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRE 318 (588)
T ss_dssp HHTHHHHHHHHTCS--SHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHH
T ss_pred HHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999720235--6888899998578888776653434441689999872133577799998799999987665543
Q ss_pred H-HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 6-530599158999999963207876678999988889888888888888987876677788899987643200233455
Q 000834 300 K-NLKDIQGPALALILERIKLNGASQVSMGPTSKSSSKVPKSASNGVSKHGNRAISSRVIPTKGARPESIMSVQDFAVQS 378 (1263)
Q Consensus 300 ~-~l~~L~~~~~~~ilek~~~~g~~k~s~~p~sk~~sk~~k~~s~~~~k~~~~~~ssr~~~~~~~~~~~~~s~~~~~~~s 378 (1263)
. ++..+ +..+.... .
T Consensus 319 ~~~~~~i--------~~~l~~~~--~------------------------------------------------------ 334 (588)
T d1b3ua_ 319 NVIMSQI--------LPCIKELV--S------------------------------------------------------ 334 (588)
T ss_dssp HHHHHTH--------HHHHHHHH--T------------------------------------------------------
T ss_pred HHHHHHH--------HHHHHHHH--C------------------------------------------------------
T ss_conf 3219999--------88888761--3------------------------------------------------------
Q ss_pred HHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 54210247854677664631455678866679999999875512989853058228999999999999601150245788
Q 000834 379 QALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEV 458 (1263)
Q Consensus 379 ~pl~~~~~~~k~~~~~~~v~kw~f~~p~~e~ve~L~~q~~~~i~~~l~~~Lfs~dwk~Rl~ale~L~~~l~s~~~~~~~~ 458 (1263)
+....-|... . ..+... ...+. .......+-+.+...+.+.+...|..++..+......... ...
T Consensus 335 -------d~~~~vr~~~--~-~~l~~~-~~~~~--~~~~~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~--~~~ 399 (588)
T d1b3ua_ 335 -------DANQHVKSAL--A-SVIMGL-SPILG--KDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI--RQL 399 (588)
T ss_dssp -------CSCHHHHHHH--H-TTGGGG-HHHHC--HHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH--HHH
T ss_pred -------CCCHHHHHHH--H-HHHHHH-HHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHH
T ss_conf -------8876789999--9-988655-43013--1678888888899998751022226778888888750031--344
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999986067409999999986999999986317886357798678999998289749999999999999998628
Q 000834 459 LDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYS 538 (1263)
Q Consensus 459 lDlllk~l~lrl~DtN~qV~~k~Le~l~~ll~~L~~~~~~lsd~ea~~~lP~LieKlGD~K~~vR~~~~~il~~i~~v~~ 538 (1263)
.+.++..+...+.|.|..+...+++.+..+...+.... + ...+.|.++.-+.|....||..+-..+..+...++
T Consensus 400 ~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~--~----~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~ 473 (588)
T d1b3ua_ 400 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF--F----DEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFG 473 (588)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGG--C----CHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH--H----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 36778999999843358899999999999997718476--7----78888887763568741689999999999999839
Q ss_pred C----CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCH
Q ss_conf 7----360899997313678675999999999999960654227421089999761179988899999999999998798
Q 000834 539 A----TKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSLQIVASLTAERDGEIRKAALNTLATGYKILGE 614 (1263)
Q Consensus 539 ~----skv~~~ll~glksKN~kvR~ecL~~L~~lI~~~G~~v~~~~k~L~~Iak~i~D~d~~VR~AAl~~l~~ly~~~G~ 614 (1263)
. ..+++.+.+.++++++.+|..++..+..+.+.++.... ....++.+.+++.|+.++||.+|.++++.+...+++
T Consensus 474 ~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~-~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~~~~~~ 552 (588)
T d1b3ua_ 474 KEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDIT-TKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDN 552 (588)
T ss_dssp HHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHH-HHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCH
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 3878999999999986599878999999999999998696878-999999999885999879999999999999987080
Q ss_pred H
Q ss_conf 8
Q 000834 615 D 615 (1263)
Q Consensus 615 ~ 615 (1263)
.
T Consensus 553 ~ 553 (588)
T d1b3ua_ 553 S 553 (588)
T ss_dssp H
T ss_pred H
T ss_conf 7
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|