Citrus Sinensis ID: 000982
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1201 | 2.2.26 [Sep-21-2011] | |||||||
| Q5JPE7 | 1267 | Nodal modulator 2 OS=Homo | yes | no | 0.849 | 0.805 | 0.320 | 1e-144 | |
| Q15155 | 1222 | Nodal modulator 1 OS=Homo | yes | no | 0.849 | 0.834 | 0.319 | 1e-144 | |
| P69849 | 1222 | Nodal modulator 3 OS=Homo | yes | no | 0.853 | 0.838 | 0.321 | 1e-144 | |
| Q6GQT9 | 1214 | Nodal modulator 1 OS=Mus | yes | no | 0.855 | 0.846 | 0.312 | 1e-144 | |
| Q54CU4 | 11103 | Colossin-A OS=Dictyosteli | no | no | 0.232 | 0.025 | 0.262 | 2e-06 | |
| Q932F7 | 1141 | Serine-aspartate repeat-c | yes | no | 0.129 | 0.136 | 0.280 | 0.0005 | |
| Q99W46 | 1141 | Serine-aspartate repeat-c | yes | no | 0.129 | 0.136 | 0.280 | 0.0006 | |
| Q2FJ77 | 1154 | Serine-aspartate repeat-c | N/A | no | 0.129 | 0.135 | 0.280 | 0.0008 | |
| O86489 | 1166 | Serine-aspartate repeat-c | yes | no | 0.129 | 0.133 | 0.280 | 0.0008 | |
| Q5HIB2 | 1166 | Serine-aspartate repeat-c | yes | no | 0.129 | 0.133 | 0.280 | 0.0008 |
| >sp|Q5JPE7|NOMO2_HUMAN Nodal modulator 2 OS=Homo sapiens GN=NOMO2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 373/1165 (32%), Positives = 569/1165 (48%), Gaps = 145/1165 (12%)
Query: 21 SADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAPN-GYYFI 79
S D + GCGGFV++ D ++YS + ++L T G +K T CAPN GY+ I
Sbjct: 32 SEDIVVGCGGFVKS-----------DVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMI 80
Query: 80 PVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTG--CNGNEDINFRFTGFTLLGRVVGAIG 137
P+YDKG F++K+ P GWS+ P V + VD C DINF FTGF++ G+V
Sbjct: 81 PLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKV----- 135
Query: 138 GESCLDKGG--GPSNVNVELLSHSGDL-ISSVITSSEGSYLFKNIIPGKYKLRASHPNLS 194
L KG GP+ V V L + + I S +T G + F ++PG Y++ A+HP +
Sbjct: 136 ----LSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGDYEILATHPTWA 191
Query: 195 VEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIYLYSDDVGKVDC--- 251
++ ST V + N GY + G V + G P+ GV L+S V K D
Sbjct: 192 LK-EASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGC 250
Query: 252 ---------PQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVS 302
PQ LC+ VS DG F F S+P G Y ++P Y+GE FDV+
Sbjct: 251 NVSPVPGFQPQDESLVY-----LCYTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVA 305
Query: 303 PSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVD--ENDMGVEGVKILVDGHERSITDRDGY 360
PS + +V H + + F V GFSV GRV++ E D GV + ++ + T DG
Sbjct: 306 PSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGD-GVPEAVVTLNNQIKVKTKADGS 364
Query: 361 YKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICG---VVR---TV 414
++L+ +T+ YTI A K H F + + PN +ADI A + +CG ++R TV
Sbjct: 365 FRLENITTGTYTIHAQKEHLYFETVT-IKIAPNTPQLADIVATGFSVCGRISIIRFPDTV 423
Query: 415 GSGNKVKVALTHGPDKVKPQVK-QTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLP- 472
NK KV L+ DK K V +TD +G+FCF+ PG Y++ M E+ +G+ P
Sbjct: 424 KQMNKYKVVLS-SQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQ 482
Query: 473 PYADVVVKSPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLT 532
+ V P++++ F Q L +V G V+C + CG L+ VTL L ++ EK+++ L+
Sbjct: 483 TFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLL-VTLQSLSRQ----GEKRSLQLS 537
Query: 533 D--DSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQK 590
++ F F +VLPGKY++ + M ++WCW+ + V+V +DV VEF Q
Sbjct: 538 GKVNAMTFTFDNVLPGKYKISI---------MHEDWCWKNKSLEVEVLEDDVSAVEFRQT 588
Query: 591 GYWLNVISTHDVDAYMTQQDGSHVPLKV---KKGSQHICVESPGVHNLHFVNP--CVFFG 645
GY L +H + Q + + KG C+ PGV+ V P C F
Sbjct: 589 GYMLRCSLSHAITLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYK---VTPRSCHRFE 645
Query: 646 SPVLKMDTSNPSPIYLKGEKYQLRGHI--------NVQSRSPI------------GVHEL 685
DTS+PS + L ++ + G I V +S I V EL
Sbjct: 646 QAFYTYDTSSPSILTLTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQEL 705
Query: 686 -PENIIVDILNGDGSISNRTTATLTSPANDQTSYAV------------YGFSLWANLGDQ 732
E + +I + R T V Y FS WA G++
Sbjct: 706 RREQQLAEI---EARRQEREKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEK 762
Query: 733 LTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPLSGVNI 792
+T P K++LFYP + V+ + C + G+ GL+ EG + P L GV I
Sbjct: 763 ITVTP------SSKELLFYPPSMEAVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEI 816
Query: 793 RIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVGPN-- 850
I +E + L + T G++ GPL+ D+ Y V + K GY L V
Sbjct: 817 VI--SEKGASSPL------ITVFTDDKGAYSVGPLHSDLEYTVTSQKEGYVLTAVEGTIG 868
Query: 851 SFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFY 910
F L+ +S I ++DD +P+P VLLSLSG +R+N ++ G F NL PG +Y
Sbjct: 869 DFKAYALAGVSFEIKAEDD--QPLPGVLLSLSGGL-FRSNLLTQDNGILTFSNLSPGQYY 925
Query: 911 LRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEA--R 968
+P++KE+ F P +Q IE+ G++ ++ R AYS GT++ L+G+P+ GV++EA +
Sbjct: 926 FKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQ 985
Query: 969 SESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGD 1028
++ Y E+TVTD G +RLRGL P Y +++ + G+ IERA P ++VG+ D
Sbjct: 986 NDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKAE---GNDHIERALPHHRVIEVGNND 1042
Query: 1029 IKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQV 1088
I ++ +VF Q + LSG+V + E L V++ + + +SL S FF
Sbjct: 1043 IDDVNIIVFRQINQFDLSGNVITS--SEYLPTLWVKLYKSENLDNPIQTVSLGQSLFFHF 1100
Query: 1089 KDLPKG--KHLLQLRSSLPSSTHRF 1111
L + +++ L S+LP S + +
Sbjct: 1101 PPLLRDGENYVVLLDSTLPRSQYDY 1125
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May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning, via its interaction with NCLN. Homo sapiens (taxid: 9606) |
| >sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5 | Back alignment and function description |
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| >sp|P69849|NOMO3_HUMAN Nodal modulator 3 OS=Homo sapiens GN=NOMO3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6GQT9|NOMO1_MOUSE Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54CU4|COLA_DICDI Colossin-A OS=Dictyostelium discoideum GN=colA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q932F7|SDRE_STAAM Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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| >sp|Q99W46|SDRE_STAAN Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain N315) GN=sdrE PE=1 SV=1 | Back alignment and function description |
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| >sp|Q2FJ77|SDRE_STAA3 Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain USA300) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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| >sp|O86489|SDRE_STAAE Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain Newman) GN=sdrE PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5HIB2|SDRE_STAAC Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain COL) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1201 | ||||||
| 255548409 | 1198 | carboxypeptidase regulatory region-conta | 0.997 | 1.0 | 0.758 | 0.0 | |
| 225437598 | 1199 | PREDICTED: nodal modulator 1 [Vitis vini | 0.998 | 1.0 | 0.762 | 0.0 | |
| 449436411 | 1199 | PREDICTED: nodal modulator 2-like [Cucum | 0.996 | 0.998 | 0.694 | 0.0 | |
| 356572803 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.989 | 0.994 | 0.707 | 0.0 | |
| 356503940 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.989 | 0.994 | 0.705 | 0.0 | |
| 297821142 | 1225 | hypothetical protein ARALYDRAFT_486740 [ | 0.987 | 0.968 | 0.663 | 0.0 | |
| 15228737 | 1227 | carbohydrate-binding-like fold-containin | 0.987 | 0.966 | 0.660 | 0.0 | |
| 357511397 | 1288 | Nodal modulator [Medicago truncatula] gi | 0.845 | 0.788 | 0.680 | 0.0 | |
| 357128074 | 1203 | PREDICTED: nodal modulator 1-like [Brach | 0.978 | 0.976 | 0.588 | 0.0 | |
| 125525541 | 1193 | hypothetical protein OsI_01543 [Oryza sa | 0.974 | 0.980 | 0.596 | 0.0 |
| >gi|255548409|ref|XP_002515261.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] gi|223545741|gb|EEF47245.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1890 bits (4896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 911/1201 (75%), Positives = 1037/1201 (86%), Gaps = 3/1201 (0%)
Query: 1 MKSRDTLTYLLIIIYSIAAVSADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRT 60
MK RD L Y I++YS + SADSIHGCGGFVEASSSLIKSRK+TD +LDYS +TVELRT
Sbjct: 1 MKIRDALLYFSILLYSFSFASADSIHGCGGFVEASSSLIKSRKSTDTKLDYSDITVELRT 60
Query: 61 LDGLVKESTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDIN 120
+DGLVKE TQCAPNGYYFIPVYDKGSFVIK++GPEGWSW+P+ V V VDDTGCN NEDIN
Sbjct: 61 VDGLVKERTQCAPNGYYFIPVYDKGSFVIKISGPEGWSWDPESVPVIVDDTGCNHNEDIN 120
Query: 121 FRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNII 180
FRFTGFTL GRV+GA+GGESCL K GGPSNVNVELLS S D ISSV+TS+ GSY F NII
Sbjct: 121 FRFTGFTLSGRVMGAVGGESCLVKSGGPSNVNVELLSPSDDFISSVLTSATGSYSFNNII 180
Query: 181 PGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIY 240
PGKYK+RASHP+L VEV+GSTEV LGFENG VDDIFF PGY++ G VVAQGNPILGVHI+
Sbjct: 181 PGKYKIRASHPDLKVEVKGSTEVHLGFENGIVDDIFFVPGYDLHGYVVAQGNPILGVHIF 240
Query: 241 LYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFD 300
LYS+DV ++DCPQGSG+A G+R LCHA+SDADG F FKS+PCG+YELVP+YKGENT+FD
Sbjct: 241 LYSEDVVELDCPQGSGDATGQRNPLCHAISDADGMFSFKSLPCGRYELVPYYKGENTLFD 300
Query: 301 VSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGVEGVKILVDGHERSITDRDGY 360
VSP LVS+SV HQHVTVP+KFQVTGFSVGGRV D NDMGVEGVKI+VDGHERS+TD++GY
Sbjct: 301 VSPPLVSVSVEHQHVTVPQKFQVTGFSVGGRVADGNDMGVEGVKIIVDGHERSMTDKEGY 360
Query: 361 YKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKV 420
YKLDQVTSN YTIEA K HY+FN LKEYMVLPNMAS+ADIKAISYD+CGVVR V SG K
Sbjct: 361 YKLDQVTSNHYTIEARKEHYRFNSLKEYMVLPNMASVADIKAISYDVCGVVRMVNSGYKA 420
Query: 421 KVALTHGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVK 480
KV LTHGP+ VKPQ +QTD +G FCFEV PGEYRLSA AATPES+ G+LFLPPY D+VVK
Sbjct: 421 KVTLTHGPENVKPQARQTDGDGKFCFEVAPGEYRLSAFAATPESAPGLLFLPPYVDLVVK 480
Query: 481 SPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLF 540
SPL+N+EFSQALVNVLG+V CKE+CGP V+VTLMRLG K + E+K+++LTD+SD+FLF
Sbjct: 481 SPLMNVEFSQALVNVLGSVTCKEKCGPSVSVTLMRLGGKRNE--ERKSITLTDESDEFLF 538
Query: 541 RDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTH 600
+VLPGKYR+EVK +S A+ +DNWCWEQSFI V VG DVKG FVQKGYW+NV+STH
Sbjct: 539 ANVLPGKYRIEVKHSSHGATPDKDNWCWEQSFIDVVVGAEDVKGNLFVQKGYWVNVVSTH 598
Query: 601 DVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIY 660
D+DAY+TQ D S + LK+KKGSQHICVESPGVH LHF+N C+ F S +K+DTSNPSP+Y
Sbjct: 599 DIDAYLTQPDHSIINLKIKKGSQHICVESPGVHELHFINSCILFASSPMKIDTSNPSPVY 658
Query: 661 LKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAV 720
L+GEKY L+G I V+ S G++E P N +VDILNGD S+ + +A L S A+D TS +
Sbjct: 659 LRGEKYLLKGQIKVELSSADGLYEPPNNFVVDILNGDSSVIDGASANLASGASDHTSTGI 718
Query: 721 YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTE 780
Y +S+WANLG++LTFVPRD R N EK+ILFYP++ V V NDGCQA IP FSGR GLY E
Sbjct: 719 YEYSIWANLGEKLTFVPRDSRVNGEKRILFYPKEHNVLVANDGCQASIPVFSGRPGLYIE 778
Query: 781 GSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKP 840
GSVSPPLSGV I+I AAEDS + LKK LALET TG DGSF+GGPLYDDI+Y+VEASKP
Sbjct: 779 GSVSPPLSGVYIKISAAEDSHVTLLKKDDLALETVTGMDGSFVGGPLYDDISYSVEASKP 838
Query: 841 GYYLRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFH 900
GY+L+++GP+SFSCQKL QIS+ IYSKDDA EPIPSVLLSLSGDDGYRNNSVS AGG+F
Sbjct: 839 GYHLKRMGPHSFSCQKLGQISIHIYSKDDANEPIPSVLLSLSGDDGYRNNSVSGAGGTFL 898
Query: 901 FDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPK 960
FDNLFPG FYLRPLLKEYAFSPPAQAIELGSG++REV F+ATRVAYSATG ITLLSGQPK
Sbjct: 899 FDNLFPGTFYLRPLLKEYAFSPPAQAIELGSGDTREVTFEATRVAYSATGMITLLSGQPK 958
Query: 961 DGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESV 1020
+GVSVEARSESKGYYEETVTD+SG+YRLRGL PDTTYVIKVV+K G GS ERASPES
Sbjct: 959 EGVSVEARSESKGYYEETVTDSSGNYRLRGLVPDTTYVIKVVEKHGLGSA-FERASPESY 1017
Query: 1021 TVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL 1080
TVKVG GDIK LDF+VFEQ E TILS +VEG R +E +SHLLVEIKSASDTSK+ESV L
Sbjct: 1018 TVKVGHGDIKALDFVVFEQLEMTILSCNVEGKRTEEFHSHLLVEIKSASDTSKIESVFPL 1077
Query: 1081 PMSNFFQVKDLPKGKHLLQLRSSLPSSTHRFESEIIEVDLEKNAQIHVGPLRYSVEENHH 1140
P+SNFFQVK+LPKGKHLLQLRSSL SST +FES+IIEVDLEK AQIHVGPLRY+ EE+H
Sbjct: 1078 PLSNFFQVKNLPKGKHLLQLRSSLQSSTLKFESDIIEVDLEKTAQIHVGPLRYNFEEDHQ 1137
Query: 1141 KQDLTPAPVFPLIVGVSVIGLFISMPRLKDLYQAAMGIPTPGFIATAKKEARKPVVRKKT 1200
KQ+LT APV PL+VGVSVI LFISMPRLKDLYQ+ GIPTPGF+ TAKKE RKPVVRKKT
Sbjct: 1138 KQELTVAPVLPLVVGVSVIALFISMPRLKDLYQSTTGIPTPGFVTTAKKETRKPVVRKKT 1197
Query: 1201 Y 1201
Y
Sbjct: 1198 Y 1198
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437598|ref|XP_002271147.1| PREDICTED: nodal modulator 1 [Vitis vinifera] gi|297743995|emb|CBI36965.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449436411|ref|XP_004135986.1| PREDICTED: nodal modulator 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356572803|ref|XP_003554555.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356503940|ref|XP_003520757.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297821142|ref|XP_002878454.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] gi|297324292|gb|EFH54713.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15228737|ref|NP_191795.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] gi|7340707|emb|CAB82950.1| putative protein [Arabidopsis thaliana] gi|332646822|gb|AEE80343.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|357511397|ref|XP_003625987.1| Nodal modulator [Medicago truncatula] gi|355501002|gb|AES82205.1| Nodal modulator [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357128074|ref|XP_003565701.1| PREDICTED: nodal modulator 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|125525541|gb|EAY73655.1| hypothetical protein OsI_01543 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1201 | ||||||
| TAIR|locus:2096049 | 1227 | AT3G62360 [Arabidopsis thalian | 0.687 | 0.673 | 0.644 | 0.0 | |
| RGD|1305240 | 1214 | Nomo1 "nodal modulator 1" [Rat | 0.507 | 0.501 | 0.342 | 1.1e-146 | |
| MGI|MGI:2385850 | 1214 | Nomo1 "nodal modulator 1" [Mus | 0.507 | 0.501 | 0.336 | 5.4e-145 | |
| ZFIN|ZDB-GENE-040826-3 | 1217 | nomo "nodal modulator" [Danio | 0.925 | 0.913 | 0.310 | 6.7e-136 | |
| UNIPROTKB|F1NZW1 | 1215 | PM5 "Uncharacterized protein" | 0.927 | 0.916 | 0.296 | 2.3e-126 | |
| UNIPROTKB|F1MF76 | 1222 | NOMO2 "Uncharacterized protein | 0.746 | 0.733 | 0.301 | 7.3e-105 | |
| FB|FBgn0033482 | 1199 | CG1371 [Drosophila melanogaste | 0.473 | 0.474 | 0.290 | 4.2e-100 | |
| UNIPROTKB|Q5JPE7 | 1267 | NOMO2 "Nodal modulator 2" [Hom | 0.745 | 0.706 | 0.301 | 1.7e-98 | |
| UNIPROTKB|Q4G177 | 1100 | NOMO2 "NOMO2 protein" [Homo sa | 0.745 | 0.813 | 0.301 | 1.7e-98 | |
| UNIPROTKB|J3KN36 | 1267 | NOMO3 "Nodal modulator 3" [Hom | 0.745 | 0.706 | 0.301 | 2.2e-98 |
| TAIR|locus:2096049 AT3G62360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2812 (994.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 540/838 (64%), Positives = 664/838 (79%)
Query: 365 QVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKVKVAL 424
+VTSN+YTI+AVK HYKF+KLK++MVLPNMAS+ DI A+SYDICGVVR GS +K KVAL
Sbjct: 401 KVTSNQYTIDAVKEHYKFDKLKKFMVLPNMASLPDINAVSYDICGVVRMFGSRHKAKVAL 460
Query: 425 THGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVKSPLL 484
THGP VKPQ+K TD G FCFEVPPGEYRLSA+AATP+ +S +LFLP Y DV VKSPLL
Sbjct: 461 THGPTNVKPQMKLTDETGAFCFEVPPGEYRLSALAATPKGASELLFLPAYVDVAVKSPLL 520
Query: 485 NIEFSQALVNVLGNVACKERCGPLVTVTLM-RLGQKHYDGTEKKTVSLTDDSDQFLFRDV 543
NIEFSQA VNV G+V CKE+CGP V+V L+ G + +KKTV LTD+S QFLF D+
Sbjct: 521 NIEFSQARVNVHGSVTCKEKCGPSVSVVLVGAAGDR-----DKKTVVLTDESSQFLFSDI 575
Query: 544 LPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVD 603
LPGKYR+EVK S EA+S ED+WCW++S I V+VGT D+KG+EFVQKGYW+N+ISTH+VD
Sbjct: 576 LPGKYRVEVKSISPEAASDEDSWCWDRSSIDVNVGTEDIKGIEFVQKGYWINIISTHEVD 635
Query: 604 AYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIYLKG 663
A + DGS LK+KKGSQ IC+ESPG H L + C+ FGS +K+D SNP PI+LK
Sbjct: 636 ARIAHPDGSPTSLKIKKGSQKICIESPGGHELQLSDSCMSFGSNSIKIDVSNPQPIHLKA 695
Query: 664 EKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAVYGF 723
EKY L+G INV+S S I EL EN IVDI + G++ N A L S + VY +
Sbjct: 696 EKYLLKGLINVESSSTIE-SELQENFIVDIQDKKGNVINTIAAKLASDGS-----GVYEY 749
Query: 724 SLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSV 783
WA+LG++++FVP+D RGN EKK+LFYP++ V+ DGCQA + F+GRLGLY +GSV
Sbjct: 750 YTWASLGEKISFVPQDSRGNVEKKMLFYPKEIHAVVSKDGCQASVSPFTGRLGLYIQGSV 809
Query: 784 SPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYY 843
SPPL GVNI+I AA+DS I+SLKKG +A+ETST + GSF+ GPLYDDI Y EASKPGY+
Sbjct: 810 SPPLPGVNIKIFAAKDSLISSLKKGEIAIETSTLSAGSFVAGPLYDDIPYATEASKPGYH 869
Query: 844 LRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDN 903
++++GP SFSCQKL QISVR+ SKD+A IP +LLSLSGD GYRNNS+S AGG F FD+
Sbjct: 870 IKRLGPYSFSCQKLGQISVRVNSKDNAETSIPPLLLSLSGDHGYRNNSISGAGGLFVFDS 929
Query: 904 LFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGV 963
LFPGNFYLRPLLKEY+F P AIEL SGES E +F+ATRVAYSA G + LLSGQP++GV
Sbjct: 930 LFPGNFYLRPLLKEYSFKPSTLAIELNSGESSEAVFEATRVAYSAMGRVALLSGQPQEGV 989
Query: 964 SVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVK 1023
++EARS+SKGYYEET +D +G+YRLRGLHPDT YVIKV KK G + +IERASPESV+++
Sbjct: 990 AIEARSDSKGYYEETTSDINGNYRLRGLHPDTAYVIKVSKKIGSANNQIERASPESVSLQ 1049
Query: 1024 VGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMS 1083
+G DI GLDFLVFEQPE TIL+ HVEG + ++LNS+LLVEIKSA D SK+E+V LP+S
Sbjct: 1050 IGYEDINGLDFLVFEQPETTILTCHVEGKQNEDLNSNLLVEIKSAIDKSKIENVFPLPLS 1109
Query: 1084 NFFQVKDLPKGKHLLQLRSSLPSSTHRFESEIIEVDLEKNAQIHVGPLRYSVEENHHKQD 1143
NFFQVK LPKGKHL+QL+SS P +H+ ESEIIEVD E NAQIH+GPLRYS+ +H Q+
Sbjct: 1110 NFFQVKGLPKGKHLVQLKSSRPLISHKVESEIIEVDFETNAQIHIGPLRYSIVADHQSQE 1169
Query: 1144 LTPAPVFPLIVGVSVIGLFISMPRLKDLYQAAMGIPTPGFIATAKKEARKPVVRKKTY 1201
+TPA + PL++GVS I LF+S+PRLKD+YQA +GI +PGF +AK+E RK V RKKT+
Sbjct: 1170 VTPAAILPLVIGVSAIALFLSIPRLKDIYQATVGISSPGFTTSAKREPRKAVARKKTF 1227
|
|
| RGD|1305240 Nomo1 "nodal modulator 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2385850 Nomo1 "nodal modulator 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040826-3 nomo "nodal modulator" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NZW1 PM5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MF76 NOMO2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0033482 CG1371 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5JPE7 NOMO2 "Nodal modulator 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4G177 NOMO2 "NOMO2 protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J3KN36 NOMO3 "Nodal modulator 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P69849 | NOMO3_HUMAN | No assigned EC number | 0.3215 | 0.8534 | 0.8387 | yes | no |
| Q6GQT9 | NOMO1_MOUSE | No assigned EC number | 0.3128 | 0.8559 | 0.8467 | yes | no |
| Q15155 | NOMO1_HUMAN | No assigned EC number | 0.3193 | 0.8492 | 0.8346 | yes | no |
| Q5JPE7 | NOMO2_HUMAN | No assigned EC number | 0.3201 | 0.8492 | 0.8050 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 |
 | GSVIVG00028133001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (1199 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1201 | |||
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 3e-08 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 9e-07 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 1e-05 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 5e-04 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 3e-08
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 949 TGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 1008
+GT+T SG P G +V + G T TD G + L GL P T + V G+
Sbjct: 3 SGTVTDASGAPIPGATVTLTNADTGTVRGTTTDADGRFSLTGLPPGTYTL--TVSAPGYK 60
Query: 1009 STKIERASPESVTVKVGSGDIKGLDF 1034
S ++ V V +G LD
Sbjct: 61 SQTVK-------DVTVTAGQTTTLDI 79
|
Length = 81 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1201 | |||
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.96 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.95 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.8 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.73 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 98.27 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 98.03 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 98.0 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 97.89 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.76 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.62 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 97.59 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 97.58 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 97.56 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.41 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 97.36 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.26 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.2 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 97.14 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 97.1 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 97.09 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 97.06 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.03 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 96.87 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 96.78 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 96.75 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 96.57 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 96.56 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 96.45 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 96.27 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 96.24 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 96.22 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 96.11 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 96.07 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 95.88 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 95.88 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 95.81 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 95.79 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 95.78 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 95.71 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 95.2 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 95.09 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 94.95 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 94.88 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 94.72 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 94.65 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 94.57 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 94.56 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 94.41 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 94.38 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 94.37 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 94.35 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 94.33 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 94.26 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 94.24 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 94.23 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 94.18 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 94.17 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 94.16 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 94.11 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 94.09 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 93.72 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 93.7 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 93.66 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 93.66 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 93.61 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 93.36 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 93.35 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 93.16 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 93.16 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 93.13 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 93.01 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 92.86 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 92.82 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 92.69 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 92.67 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 92.67 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 92.59 | |
| smart00095 | 121 | TR_THY Transthyretin. | 92.46 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 92.46 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 92.33 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 92.33 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 92.0 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 91.14 | |
| COG2373 | 1621 | Large extracellular alpha-helical protein [General | 89.94 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 89.05 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 88.93 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 88.41 | |
| KOG3006 | 132 | consensus Transthyretin and related proteins [Lipi | 88.3 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 88.05 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 87.77 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 87.77 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 87.54 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 87.4 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 87.36 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 87.35 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 87.27 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 85.79 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 85.37 | |
| smart00095 | 121 | TR_THY Transthyretin. | 85.28 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 85.15 | |
| PRK15235 | 814 | outer membrane fimbrial usher protein SefC; Provis | 84.44 | |
| smart00634 | 92 | BID_1 Bacterial Ig-like domain (group 1). | 82.52 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 81.45 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 81.43 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 81.1 |
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-224 Score=1921.73 Aligned_cols=1129 Identities=39% Similarity=0.671 Sum_probs=1031.4
Q ss_pred ccceeeeeeeeeeeeeecccceecccceeeecchhhccccccCcccccceeEEEEEecccccccccccCC-CceEEEEee
Q 000982 4 RDTLTYLLIIIYSIAAVSADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAP-NGYYFIPVY 82 (1201)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~v~gcgGfv~~~~~~~~~~k~sd~~i~lsgv~V~L~~~~G~~~~~t~t~~-nG~y~i~~l 82 (1201)
--|+..||++++..+.++.|+|+|||||| |||++||||.++|+|+|.+|.+|++|+|+| |||||||+|
T Consensus 5 ~~~~vvlLI~ls~~a~~sed~VvgCgGfV-----------kSd~eidyS~ievkL~Tk~G~lKd~tdcaPsNGYfmIPvY 73 (1165)
T KOG1948|consen 5 CHMGVVLLILLSLLAPGSEDNVVGCGGFV-----------KSDSEIDYSQIEVKLLTKEGHLKDETDCAPSNGYFMIPVY 73 (1165)
T ss_pred eeehhhhhhhhhcccCCceeeEEecccee-----------ecCCccceeeEEEEEEeeccccccccccCCCCceEEEEEe
Confidence 34778888889999999999999999999 489999999999999999999999999999 999999999
Q ss_pred ecceEEEEEcCCCCCCcCCCceeEEEcC--CCCCCCcceeEEEeeeEEeeeEeeeecCccccccCCCCcceeEEEeccCC
Q 000982 83 DKGSFVIKVNGPEGWSWNPDKVAVTVDD--TGCNGNEDINFRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG 160 (1201)
Q Consensus 83 ~~G~Y~l~~~~P~G~~~~p~~~~v~Vd~--~~~s~~~dinf~~~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g 160 (1201)
++|+|.|++++|.||+|+|++++++||+ |.|+++.||||.|+||+|+|+|..+. +.+++||.|+|++..+
T Consensus 74 dKGdyiLkIspP~GwsfePd~Vel~vDGktd~Cs~n~DinFhftGFsv~GkVlgaa--------ggGpagV~velrs~e~ 145 (1165)
T KOG1948|consen 74 DKGDYILKISPPAGWSFEPDSVELKVDGKTDACSLNEDINFHFTGFSVRGKVLGAA--------GGGPAGVLVELRSQED 145 (1165)
T ss_pred cCCcEEEEecCCCCccccCceEEEEeccccccccCCCceEEEEeeeeEeeEEeecc--------CCCcccceeecccccC
Confidence 9999999999999999999999999997 79999999999999999999999863 4799999999997754
Q ss_pred CeeeeeeecCccceeeeeecCcceeeeccCCCcEEEEeeeeEEEeeccCceeeeeEeecCcccceEEEeecCceEEEEEE
Q 000982 161 DLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIY 240 (1201)
Q Consensus 161 ~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~~~~~~~~V~v~~~~~~v~~~l~i~G~~vsG~V~~~g~Pl~Ga~V~ 240 (1201)
.++++.|+++|.|.|.+++||+|.|.++|+.|.+..++++.|++...+..+++.|.+.||++.|+|++++.|+.|+.++
T Consensus 146 -~iast~T~~~Gky~f~~iiPG~Yev~ashp~w~~~~ag~tvvev~~a~~~va~~f~VsGydl~gsv~s~s~P~~gv~~~ 224 (1165)
T KOG1948|consen 146 -PIASTKTEDGGKYEFRNIIPGKYEVSASHPAWECISAGKTVVEVKNAPVVVAPNFKVSGYDLEGSVRSESMPFVGVVMT 224 (1165)
T ss_pred -cceeeEecCCCeEEEEecCCCceEEeccCcceeEeecCcEEEEeCCCccccCCceEEEeeeeEEEEeccCCcccceEEE
Confidence 4899999999999999999999999999999999877777888887777788999999999999999999999999999
Q ss_pred EEeCCcceeecCCCCCC-Cc----c-ccccceeeeecCCcceeeceecccceeeeeeccccceEEeeCCCceeeEEeeee
Q 000982 241 LYSDDVGKVDCPQGSGN-AL----G-ERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRHQH 314 (1201)
Q Consensus 241 L~~~~~~~~~c~~g~~~-~~----~-~g~~~~~~~TD~~G~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~ 314 (1201)
|+..+.....|.+...+ +| . ....+|.+++|++|+|.|.++|+|.|+|.+.|.+++..|+++|..++++|++++
T Consensus 225 l~s~~v~~~dvpkc~gs~ap~n~~a~e~vslc~~vsd~~G~fsfksvPsGkY~l~a~y~ge~~~fdvSP~~l~v~Vehd~ 304 (1165)
T KOG1948|consen 225 LYSTSVIDLDVPKCVGSEAPLNVPATENVSLCIGVSDPRGRFSFKSVPSGKYYLAASYVGEPKSFDVSPNPLKVVVEHDH 304 (1165)
T ss_pred EEEcccccccCCccccCCCCCCCCcccceeeEEEEEcCCceEEEEEcCCCCEEEEEEecCCceEEEeCCCceeEEEeccc
Confidence 99987666665554333 21 1 224689999999999999999999999999999999999999999999999999
Q ss_pred eeccceeEEeeeeeeeEEeeC-CCcceeeEEEEEcCcccccccCCceeeeee-eecceeEEeeeeeeeeeccceeeEeec
Q 000982 315 VTVPEKFQVTGFSVGGRVVDE-NDMGVEGVKILVDGHERSITDRDGYYKLDQ-VTSNRYTIEAVKVHYKFNKLKEYMVLP 392 (1201)
Q Consensus 315 ~~l~~~f~~~g~sv~G~V~d~-~G~pl~Ga~V~l~G~~~~~TDadG~y~~~~-L~pG~Y~I~~~~~~y~~~~~~~v~v~p 392 (1201)
+++++.|+++||+++|||++. +|.|++||+|.+||+..+.||++|+|+++| +..|+|+|+++++||+|++.. +++.|
T Consensus 305 lqi~~ef~vtgfSvtGRVl~g~~g~~l~gvvvlvngk~~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv~-~kv~p 383 (1165)
T KOG1948|consen 305 LQIASEFRVTGFSVTGRVLVGSKGLPLSGVVVLVNGKSGGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTVH-AKVKP 383 (1165)
T ss_pred eeccceeEEEEEEeeeeEEeCCCCCCccceEEEEcCcccceEcccceEEeeeeeccCcEEEEEeccceeeeeEE-EEecC
Confidence 999999999999999999997 999999999999999999999999999999 788999999999999999995 89999
Q ss_pred CCccccccceeeeeeeeeEEEecCCceeEEEeccCCCCCCcccccccCC-CCeEEEeCCCceeeeeeecCCCCCcceeec
Q 000982 393 NMASIADIKAISYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNN-GNFCFEVPPGEYRLSAMAATPESSSGILFL 471 (1201)
Q Consensus 393 ~~~~i~dI~~~~~~v~G~V~~~~~~~~a~VtL~~~~~~~~~~~t~Td~~-G~f~f~L~PG~Y~v~~~~~~~~~~~G~~~~ 471 (1201)
++++++||++..|+|||+|.... .++.+.|+......+....+|++. |+|||.++||.|+|+++.++++.++|++|.
T Consensus 384 ntasLpdI~a~~fdiCGqV~~~~--k~~nv~lt~~~s~~k~s~~~t~etdGsfCf~vppG~ytievl~~ta~~aagl~l~ 461 (1165)
T KOG1948|consen 384 NTASLPDITAQKFDICGQVEKSE--KGVNVKLTFTRSDDKRSLEITPETDGSFCFPVPPGLYTIEVLDKTASGAAGLLLT 461 (1165)
T ss_pred CccccccccccceeeeeEEEEcc--ccceeEEEEccCccccccccccccCCceeEEcCCccEEEEEeccCcccccccEee
Confidence 99999999999999999998665 444555543222223334444444 999999999999999999999999999999
Q ss_pred CccceEEe-eCccccchhhhheeeeccceeeccccCCcEEEEEEeecccCCCCceeeEEEeecCCcceeecccCCcceEE
Q 000982 472 PPYADVVV-KSPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGKYRL 550 (1201)
Q Consensus 472 p~~~~V~V-~~p~~~I~f~q~~a~V~G~V~~~~~~~~~~~VtL~~~~~~~~~~~~~~~~~~Td~~G~f~f~~L~PG~Y~v 550 (1201)
|..++++| ++|+++|.|+|++++++|.|+|++.|+ .+.|+|+....+ ....++++.+|..+.|+|+|++||+|++
T Consensus 462 P~~~~veV~~~pv~ni~Fsqfranv~g~lsCl~tCg-~a~vtlq~la~G---q~~~~~vk~td~~~~ftF~nilPGkY~~ 537 (1165)
T KOG1948|consen 462 PRLLEVEVLKNPVTNIRFSQFRANVNGHLSCLGTCG-TATVTLQLLAAG---QTLVRSVKGTDESSVFTFENILPGKYSA 537 (1165)
T ss_pred eeeeeEEeecCcccceehhhhhhccceEEEeccCCC-ceeEEEEecccC---CcceeeEEEEeeccEEEeeccCCcceEE
Confidence 99999999 689999999999999999999999999 789999877322 1356667789999999999999999999
Q ss_pred EEeecCCccccCCCceeeeeeeeeeeeccCccceeEEEEeeeEEEEeeeccccceeecCCCCeee---eeeecCceeEEE
Q 000982 551 EVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVP---LKVKKGSQHICV 627 (1201)
Q Consensus 551 ~~~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~~~F~q~Gy~~~i~~sh~v~~~~~~~~~~~~~---~~l~kG~~~~c~ 627 (1201)
++. |+++|||+.++++++|.++++++++|+|+|||++|++||+++++|+|++|+..+ ++|.||.|+||+
T Consensus 538 ~i~--------d~~~wCwe~ss~~lnV~~~d~~aieFvqkGy~~~iisSH~a~~e~~h~dg~~en~~~lki~kgvn~iCv 609 (1165)
T KOG1948|consen 538 RID--------DNGRWCWEKSSMTLNVEQSDTQAIEFVQKGYAAQIISSHPAEIEWSHADGKQENGKTLKIGKGVNSICV 609 (1165)
T ss_pred Eec--------cCCCceeecceEEEEeecccccccceeeccEEEEEEecCceeeEEecCCCCCCCcceEEecCcceEEEc
Confidence 998 478999999999999999999999999999999999999999999999987665 999999999999
Q ss_pred eCCceeeeEeecceeeecCCeeeeeCCCCceeeeecceeeeeeeeEEeecCCCccccCCccEEEEEEcCCCCccccccce
Q 000982 628 ESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTAT 707 (1201)
Q Consensus 628 ~~~G~y~~~~~~sc~~f~~~~~~~~t~~~~~i~l~~~~~~~~G~i~~~~~~~~~~~~~~~~~~v~~~~~~g~~i~~~~~~ 707 (1201)
++||.|.+.+ .+||.|+.+++++++..+.+.+++++..+++|.|.++..+... ...++++++++++..+.+|+...
T Consensus 610 ~kpGs~~~~~-~sc~tfd~sspki~v~~~~~hh~ka~i~~~k~~i~ve~~kt~~-~s~~~k~v~e~~~~k~evit~~a-- 685 (1165)
T KOG1948|consen 610 PKPGSYDVSL-GSCYTFDRSSPKITVPFDGVHHEKAVIARIKGTIDVENDKTAA-VSIREKFVVEIQDIKSEVITREA-- 685 (1165)
T ss_pred cCCccceeec-cceeecccCCceeecCCCcchHhHhhhhhhccceeeeeccccc-ccchhhhhhhhhhhcccccCccc--
Confidence 9999999997 9999999999999999999999999999999999887755321 25567889999999998885322
Q ss_pred ecCCCCCCcceeEEEEEEeeccCCceeEeecCCCCCcceeEEeeeeceeEEEecCCceeeeccccceeeeEEecccCCCC
Q 000982 708 LTSPANDQTSYAVYGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPL 787 (1201)
Q Consensus 708 ~~~~~~~~~~~~~y~~~~~a~~g~~~~v~P~s~~~~~~~~llf~P~~~~vtv~~~~c~~~~~~f~~~~G~~i~G~v~p~l 787 (1201)
+..+-| ++++.|+|.+||++||+|+|+|+| |.|||||+++++.|+++ |+..+++|.+++|+||+|+|+|+|
T Consensus 686 -~~~avD-~G~f~yey~twas~gekl~ivPss------k~lLFyP~s~eavvS~d-C~~~a~~f~g~rGLfL~Gsi~Pal 756 (1165)
T KOG1948|consen 686 -QVPAVD-NGRFTYEYPTWASSGEKLVIVPSS------KLLLFYPTSKEAVVSGD-CIENAVKFNGFRGLFLDGSIKPAL 756 (1165)
T ss_pred -cccccc-CCcceEechhhcCCCceEEEeecc------ceeeecCCceEEEEecc-cchhheeecceeeEEEcceeccCC
Confidence 222222 278999999999999999999998 89999999999999876 999999999999999999999999
Q ss_pred CccEEEEEEecCccccccccceEEEEeeeCCCcceeccccccCccceeeecCCccceeeecC--CcccccccccEEEEEE
Q 000982 788 SGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVGP--NSFSCQKLSQISVRIY 865 (1201)
Q Consensus 788 ~gv~i~i~~~~~~~~~~~~~g~~~~~~~Td~~G~f~~~~L~~~~~y~i~a~k~gy~~~~~~~--~~f~~~~l~~i~v~v~ 865 (1201)
+||+|+|+.++++ ++.+++.|+++|.|++|||+.+..|.++|+||||+|++.++ ++|++++|++|+++++
T Consensus 757 ega~Ikis~kkds--------~~~Iev~T~~~Gafk~GPl~~dl~yd~tA~kegyvft~~~~t~~sfqa~kl~~vsv~vk 828 (1165)
T KOG1948|consen 757 EGAVIKISLKKDS--------DVVIEVITNKDGAFKIGPLKRDLDYDITATKEGYVFTPTSPTPGSFQAVKLSQVSVKVK 828 (1165)
T ss_pred CCcEEEEEecCCC--------ceeEEEEEcCCCcEEecccccccccceeeccCceEEecCCCCccceeeeeeeEEEEEEe
Confidence 9999999999887 78999999999999999999999999999999999999983 8999999999999999
Q ss_pred ecCCCCCCCceeEEEeecCCCcccCccccCCceeeeccccCccccchhhhhhcccCCCceeEecCCCcceeEEEEEEEEE
Q 000982 866 SKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVA 945 (1201)
Q Consensus 866 ~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~ 945 (1201)
|++ ++||+||||||||+++||+|++|+++|.++|++|+||+||||||||||+|+|+++||+|+|||+.+++|+|+|+|
T Consensus 829 dea--~q~LpgvLLSLsGg~~yRsNlvtgdng~~nf~sLsPgqyylRpmlKEykFePst~mIevkeGq~~~vvl~gkRvA 906 (1165)
T KOG1948|consen 829 DEA--TQPLPGVLLSLSGGKDYRSNLVTGDNGHKNFVSLSPGQYYLRPMLKEYKFEPSTSMIEVKEGQHENVVLKGKRVA 906 (1165)
T ss_pred ccC--CCcCCcEEEEEecCcchhhccccCCCceeEEeecCcchhhhhhHHHhcCcCCCceeEEeccCceEEEEEEEEEEE
Confidence 996 699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeEEeecCCCCCceeEEEeecc-cceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEe
Q 000982 946 YSATGTITLLSGQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKV 1024 (1201)
Q Consensus 946 ~s~~G~V~~~~g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~ 1024 (1201)
|||||+|.+|||+|++||.+||++++ ..++||+|||+||+||||||+|||.|.|+++++. ++++|||++|++++|+|
T Consensus 907 ySayGtvssLsGdp~~gVaieA~sdn~~~y~eeattdenG~yRiRGL~Pdc~Y~V~vk~~~--~n~~iers~P~s~tv~v 984 (1165)
T KOG1948|consen 907 YSAYGTVSSLSGDPMKGVAIEALSDNCDLYQEEATTDENGTYRIRGLLPDCEYQVHVKSYA--DNSPIERSFPRSFTVSV 984 (1165)
T ss_pred EEeeeehhhccCCcccCeEEEEecCCCCccccccccccCCcEEEeccCCCceEEEEEeecc--CCCcccccCCceEEEEe
Confidence 99999999999999999999999998 7899999999999999999999999999999875 38999999999999999
Q ss_pred ccCccccceEEEeeccceeEEEEEeeccchhccccceEEEE-eccCCccceeEEEeeccccceeecCCCCc--ceeeEec
Q 000982 1025 GSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEI-KSASDTSKVESVISLPMSNFFQVKDLPKG--KHLLQLR 1101 (1201)
Q Consensus 1025 ~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l-~~~~~~~~~~~~~~~~~~~~f~~~~l~~~--~y~v~~~ 1101 (1201)
+++||+|+||+||++++++||+|+|+++. .|+++++||.+ |+++++++|+++. +++ .+++||+||++ +|+|+|+
T Consensus 985 gneDv~glnf~af~q~kttdit~~V~~~~-ne~l~sl~vv~yKs~nddspv~sv~-~gq-l~~ffp~l~~dg~~yvV~l~ 1061 (1165)
T KOG1948|consen 985 GNEDVKGLNFMAFIQAKTTDITVEVGMDT-NEELQSLRVVIYKSNNDDSPVASVV-AGQ-LLHFFPNLPRDGVEYVVRLE 1061 (1165)
T ss_pred cccccCCceEEEEeccceEEEEEEEcccc-cccccceEEEEEecCCCCCcceEEe-ccc-eeeeccccCCCCceEEEEEe
Confidence 99999999999999999999999999987 46677888776 9999999999954 444 77888888886 9999999
Q ss_pred cCCCCcccccccceEEEeccccc-eeEEeeeeeeeecccccccCCCCcccceehhhhheeee---------ecccchhHH
Q 000982 1102 SSLPSSTHRFESEIIEVDLEKNA-QIHVGPLRYSVEENHHKQDLTPAPVFPLIVGVSVIGLF---------ISMPRLKDL 1171 (1201)
Q Consensus 1102 s~l~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 1171 (1201)
|+||.++|+|+ ++ .|.|.. ++|+ .|.|.|+||..++|++|++++||||+++|+++| +++|+++|+
T Consensus 1062 Stlp~~~y~yk--lp--~fva~~~~k~a-~l~f~p~rra~eaDi~q~s~~al~l~~lvalaffnqd~~~~lLsi~s~ld~ 1136 (1165)
T KOG1948|consen 1062 STLPPQAYAYK--LP--RFVADQAMKVA-RLPFTPSRRANEADISQGSFLALPLFVLVALAFFNQDRVLELLSIPSFLDW 1136 (1165)
T ss_pred ccCCchheeee--cc--EEEeecceEEE-EEEeCccccccccccccCcEehhHHHHHHHHHHhchhhhhhhhcchhHHHH
Confidence 99999999994 55 788876 8888 899999999999999999999999999999987 478899999
Q ss_pred HHhhcCCCCCCchhhhccccccccccccC
Q 000982 1172 YQAAMGIPTPGFIATAKKEARKPVVRKKT 1200 (1201)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1200 (1201)
+++..+.++.+.+-..||||||...||||
T Consensus 1137 vrat~a~~sdn~t~~rk~ep~k~~~~~kt 1165 (1165)
T KOG1948|consen 1137 VRATFAPTSDNHTRKRKREPRKAVARKKT 1165 (1165)
T ss_pred HHhhccccCCCCChhhhcchhhhhhhccC
Confidence 99999999999988889999999999986
|
|
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >COG2373 Large extracellular alpha-helical protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >KOG3006 consensus Transthyretin and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15235 outer membrane fimbrial usher protein SefC; Provisional | Back alignment and domain information |
|---|
| >smart00634 BID_1 Bacterial Ig-like domain (group 1) | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 2e-09
Identities = 84/635 (13%), Positives = 180/635 (28%), Gaps = 193/635 (30%)
Query: 169 SSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELG-FENGEVDDIFFAPGYEIRGLV 227
+ E Y +K+I+ A N + + ++ E+D I
Sbjct: 11 TGEHQYQYKDILS--VFEDAFVDNF--DCKDVQDMPKSILSKEEIDHI------------ 54
Query: 228 VAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV------ 281
+ + + G L+ + ++ V + KF+ +
Sbjct: 55 IMSKDAVSGTL-RLF-------WTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQ 104
Query: 282 PCGQYELVPHYKGENTVFDVSPSLVSMSV-RHQHVTV---------PEKFQVTGFSVGG- 330
P + + + +++ + +V R Q P K V V G
Sbjct: 105 PSMMTRMYIEQR--DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLGS 161
Query: 331 -------------RVVDENDMGVEGVKILVDGHERSITDR-----DGYYKL--------D 364
+V + D + + + + S Y++ D
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNL---KNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 365 QVTSNRYTIEAVKVHYK-FNKLKEY----MVLPNMASIADIKAISYDI-C---------G 409
++ + I +++ + K K Y +VL N+ + A +++ C
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA--FNLSCKILLTTRFKQ 276
Query: 410 VVRTVGSGNKVKVALTH--------------------GPDKVKPQVKQTDNNGNFCFEVP 449
V + + ++L H P + +V T+
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN---------- 326
Query: 450 P------GE--------------YRLSAMAATPESSSGILFLPP------YADVVVKSPL 483
P E + ESS + L P + + V P
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS--LNVLEPAEYRKMFDRLSVFPPS 384
Query: 484 LNIEFSQALVNVLGNVACKERCGPLVTVTLMR--LGQKHYDGTEKKTVSLTD-------- 533
+I + L + +V + +V L + L +K + T+S+
Sbjct: 385 AHIP-TILLSLIWFDV--IKSDVMVVVNKLHKYSLVEKQPK---ESTISIPSIYLELKVK 438
Query: 534 -DSDQFLFRDVLPGKYRLEVKRTSREAS-SMEDN-WCWEQSFIG--VDVGTNDVKGVEFV 588
+++ L R ++ Y + S + D + IG + + + F
Sbjct: 439 LENEYALHRSIV-DHYNIPKTFDSDDLIPPYLDQYFYS---HIGHHLKNIEHPERMTLF- 493
Query: 589 QKGY----WLNVISTHDVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNL-----HFVN 639
+ + +L HD A+ + ++K +IC P L F+
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Query: 640 PC--VFFGSP---VLKMDTSNP-SPIYLKGEKYQL 668
S +L++ I+ + K Q+
Sbjct: 554 KIEENLICSKYTDLLRIALMAEDEAIFEEAHK-QV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1201 | |||
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.19 | |
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.12 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.96 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.95 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.84 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.82 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.8 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.75 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.58 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.56 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.33 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.31 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 98.22 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 98.22 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 98.15 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 97.93 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.84 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 97.82 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.6 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 97.52 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 97.41 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 97.38 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 97.22 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 97.14 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 97.1 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 97.05 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 96.95 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 96.87 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 96.84 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 96.83 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 96.8 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 96.77 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 96.67 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 96.64 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 96.53 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 96.47 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 96.43 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 96.38 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 96.21 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 96.08 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 96.05 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 95.99 | |
| 3cu7_A | 1676 | Complement C5; Mg domain, inflammation, anaphylato | 95.98 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 95.93 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 95.66 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 95.3 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 95.2 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 95.16 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.16 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 95.1 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.02 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 94.91 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 94.79 | |
| 2b39_A | 1661 | C3; thioester, immune defense, immune system; HET: | 94.72 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 94.72 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 94.52 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 94.5 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 94.45 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 94.45 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 94.35 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 94.27 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 94.24 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 94.18 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 94.18 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 94.13 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 93.89 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 93.86 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 93.81 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.79 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 93.74 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 93.6 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 93.59 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 93.54 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 93.47 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 93.34 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 93.02 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 92.94 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 92.91 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.87 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 92.7 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 92.69 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 92.61 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 92.49 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 92.49 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 92.45 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.39 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 92.28 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 92.23 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 92.11 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 91.96 | |
| 3hrz_A | 627 | Cobra venom factor; serine protease, glycosilated, | 91.87 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 91.86 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 91.4 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 91.38 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 91.01 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 90.95 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 90.74 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 90.7 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 90.68 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 90.37 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 90.33 | |
| 4acq_A | 1451 | Alpha-2-macroglobulin; hydrolase inhibitor, protei | 90.19 | |
| 3prx_B | 1642 | Cobra venom factor; immune system, complement, imm | 90.04 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 89.77 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 89.74 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 89.7 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 89.68 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 89.57 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 89.16 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 88.92 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 88.62 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 88.08 | |
| 4fxk_A | 656 | Complement C4 beta chain; immune system, proteolyt | 86.66 | |
| 1d2o_A | 187 | Collagen adhesin, CNA; beta sandwich, IGG, IGSF, s | 86.59 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 86.41 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 85.89 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 85.72 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 85.12 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 84.72 | |
| 1qfh_A | 212 | Protein (gelation factor); actin binding protein, | 84.62 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 84.51 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 84.42 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 83.87 | |
| 1ti6_B | 274 | Pyrogallol hydroxytransferase small subunit; molyb | 83.54 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 82.64 | |
| 2k7q_A | 191 | Filamin-A; IG-like, ABP-280, actin binding protein | 81.67 | |
| 2j3s_A | 288 | Filamin-A; cytoskeleton, phosphorylation, structur | 81.03 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 80.63 |
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus} | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A* | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B* | Back alignment and structure |
|---|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A* | Back alignment and structure |
|---|
| >1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
| >1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 | Back alignment and structure |
|---|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
| >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A | Back alignment and structure |
|---|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1201 | |||
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.49 | |
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.48 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 98.43 | |
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.27 | |
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.26 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 98.03 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 97.99 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 97.73 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 95.53 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 95.47 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 95.3 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 95.13 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 94.85 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 94.57 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 94.39 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 94.22 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 94.15 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 93.97 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 93.91 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 93.66 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 92.57 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 91.77 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 90.95 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 89.65 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 89.14 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 89.08 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 88.65 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 88.53 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 84.95 | |
| d1cwva2 | 96 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 84.71 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 83.71 | |
| d1f00i1 | 95 | Intimin {Escherichia coli [TaxId: 562]} | 83.6 | |
| d1cwva3 | 103 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 82.56 | |
| d1cwva2 | 96 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 82.43 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 81.55 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 81.3 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 80.16 |
| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Prealbumin-like superfamily: Cna protein B-type domain family: Cna protein B-type domain domain: Transhydroxylase beta subunit, BthL, C-terminal domain species: Pelobacter acidigallici [TaxId: 35816]
Probab=98.49 E-value=8.5e-08 Score=84.17 Aligned_cols=61 Identities=23% Similarity=0.294 Sum_probs=51.3
Q ss_pred eeEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeeeeecCcceeeeccCCCcEEE
Q 000982 125 GFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVE 196 (1201)
Q Consensus 125 g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~~ 196 (1201)
.|.++|.|.+ |.|++||+|.|.+. ++.+..++||++|+|+|.+|+||+|.|.+++.||...
T Consensus 2 n~~~~gi~~~----------G~~v~gA~V~L~~~-~~~v~~t~Td~~G~F~f~~l~~G~Y~l~is~~Gy~~~ 62 (79)
T d1vlfn1 2 NYVTAGILVQ----------GDCFEGAKVVLKSG-GKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYS 62 (79)
T ss_dssp EEEEEEEEET----------TEECTTCEEEEEET-TEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEE
T ss_pred CcEEeeEEEC----------CccccccEEEEECC-CCeEEeeEECCCCcEEEEecCCCCEEEEEEEecccce
Confidence 3556675543 58999999999874 5567889999999999999999999999999999754
|
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
|---|
| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|